View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10131_low_52 (Length: 250)
Name: NF10131_low_52
Description: NF10131
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10131_low_52 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 10 - 250
Target Start/End: Original strand, 32822395 - 32822635
Alignment:
| Q |
10 |
gcagagatttgaggaaccgtttaggcctaaagaacaaacaaagcttgtgcagtgaaaccttagtaactcgtttccgtctgctatgcagcggggatgnnnn |
109 |
Q |
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| T |
32822395 |
gcagagatttgaggaaccgtttaggcctaaagaacaaacaaaggttgtgcagtgaaaccttagtaactcgtttccgtctgctatgcagcggggatgtttt |
32822494 |
T |
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| Q |
110 |
nnngagagatttgttgcttttgctttgattgagtctctgtactcttcgaacttggttatggttttctgtgtgttctggactttaaggatgcggtcgattt |
209 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32822495 |
tttgagagatttgttgcttttgctttgattgagtctctgtactcttcgaacttggttatggttttctgtgtgttctggactttaaggatgcggtcgattt |
32822594 |
T |
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| Q |
210 |
tacagacgggagattgcttctttagccagcttgagtgaaat |
250 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |
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| T |
32822595 |
tacagacgggagattgcttctttagccagcttgagtgaaat |
32822635 |
T |
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