View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10131_low_75 (Length: 233)
Name: NF10131_low_75
Description: NF10131
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10131_low_75 |
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Alignment Details
Target: chr1 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 12872350 - 12872562
Alignment:
| Q |
1 |
gtttgaactttgaagagaaacagtagggtttcatagttgtgtattagtatataaagctacgcgtatatgaattagaggccgcacaagatttgtatttata |
100 |
Q |
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| T |
12872350 |
gtttgaactttgaagagaaacagtagggtttcatagttgtgtattattatataaagctacgcgtatatgaattagaggccgcacaagatttgtatt-ata |
12872448 |
T |
|
| Q |
101 |
taaagattttgaagaaaataaagctacgcaaatcaatggaatacaaagtcttatggagtgcttggaattgaagtgaagtgtttcaagttttagagaaaat |
200 |
Q |
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| T |
12872449 |
taaagattttgaagaaaataaagctacgcaaatcaatggaatacaaagtcttatggagttcttggaattgaagtgaagtgtttcaagttttagagaaaat |
12872548 |
T |
|
| Q |
201 |
attcatcctctatt |
214 |
Q |
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|||||||||||||| |
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| T |
12872549 |
attcatcctctatt |
12872562 |
T |
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