View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10132_low_17 (Length: 350)
Name: NF10132_low_17
Description: NF10132
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10132_low_17 |
 | |
|
| [»] scaffold1749 (2 HSPs) |
| | |
|
| [»] scaffold0428 (2 HSPs) |
| | |
|
Alignment Details
Target: chr4 (Bit Score: 318; Significance: 1e-179; HSPs: 14)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 19 - 340
Target Start/End: Original strand, 31476306 - 31476627
Alignment:
| Q |
19 |
gacactaatcttcaaaaaggtgaatccatagcacctgaactctttcatgcaattgaagggtctcaggttttcgttgtggtcttgtcaaagaactacgctt |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31476306 |
gacactaatcttcaaaaaggtgaatccatagcacctgaactctttcatgcaattgaagggtctcaggttttcgttgtggtcttgtcaaagaactacgctt |
31476405 |
T |
|
| Q |
119 |
tctcaacttggtgcttgaaagaattggaatacatcctgtgttgtgttcaagcatctaaaaagtatgttctacctgtgttctatgatgttgatccttcttt |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31476406 |
tctcaacttggtgcttgaaagaattggaatacatcctgtgttgtgttcaagcatctaaaaagtatgttctacctgtgttctatgatgttgatccttcttt |
31476505 |
T |
|
| Q |
219 |
ggtgcgaaagcaaactgggatttatagtgaagcatttgtccaacatgaacacagattcaaacaagactctcaaatggtgctacgatggagggcagctctg |
318 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31476506 |
ggtgcgaaagcaaactgggatttatagtgaagcatttgtccaacatggacacagattcaaacaagactctcaaatggtgctacgatggagggcagctctg |
31476605 |
T |
|
| Q |
319 |
acacaagtcgccgatctctctg |
340 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
31476606 |
acacaagtcgccgatctctctg |
31476627 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 19 - 340
Target Start/End: Original strand, 31496246 - 31496567
Alignment:
| Q |
19 |
gacactaatcttcaaaaaggtgaatccatagcacctgaactctttcatgcaattgaagggtctcaggttttcgttgtggtcttgtcaaagaactacgctt |
118 |
Q |
| |
|
||||||||||||| ||||||||||||||||| |||| | ||| || |||||||||| ||||||||||| ||||||||||| |||| |||||| |||| |
|
|
| T |
31496246 |
gacactaatcttccaaaaggtgaatccataggacctaagctcctttgtgcaattgaaaactctcaggtttttgttgtggtcttatcaaggaactatgctt |
31496345 |
T |
|
| Q |
119 |
tctcaacttggtgcttgaaagaattggaatacatcctgtgttgtgttcaagcatctaaaaagtatgttctacctgtgttctatgatgttgatccttcttt |
218 |
Q |
| |
|
||||||||| ||||||| ||||||| ||| | ||||| || || | | ||||||||| ||||||| ||||| |||||||||||||| |||||| | |
|
|
| T |
31496346 |
tctcaacttcgtgcttgcaagaattagaaaagatccttgaatgggtcaaggtatctaaaaaacatgttctgcctgttttctatgatgttgacccttctat |
31496445 |
T |
|
| Q |
219 |
ggtgcgaaagcaaactgggatttatagtgaagcatttgtccaacatgaacacagattcaaacaagactctcaaatggtgctacgatggagggcagctctg |
318 |
Q |
| |
|
|||||||||||||| ||| |||||| |||||||||||||| |||||||||| |||||| ||||||||||||| ||||||| | ||||||||| |||||| |
|
|
| T |
31496446 |
ggtgcgaaagcaaagtggaatttatggtgaagcatttgtcaaacatgaacaaagattccaacaagactctcagatggtgcaaagatggagggaagctcta |
31496545 |
T |
|
| Q |
319 |
acacaagtcgccgatctctctg |
340 |
Q |
| |
|
| ||||||||| |||||||||| |
|
|
| T |
31496546 |
atacaagtcgctgatctctctg |
31496567 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 19 - 340
Target Start/End: Original strand, 31501416 - 31501737
Alignment:
| Q |
19 |
gacactaatcttcaaaaaggtgaatccatagcacctgaactctttcatgcaattgaagggtctcaggttttcgttgtggtcttgtcaaagaactacgctt |
118 |
Q |
| |
|
||||||||||||| ||||||||||||||||||| | || || ||| ||||||||||| ||| | |||| |||| |||| | |||| |||||| |||| |
|
|
| T |
31501416 |
gacactaatcttccaaaaggtgaatccatagcatccgagcttcttcgtgcaattgaagattcttatatttttgttgcggtcctctcaaggaactatgctt |
31501515 |
T |
|
| Q |
119 |
tctcaacttggtgcttgaaagaattggaatacatcctgtgttgtgttcaagcatctaaaaagtatgttctacctgtgttctatgatgttgatccttcttt |
218 |
Q |
| |
|
||||| |||||||||| ||||||| ||| | ||||| || || || | ||||||||| ||||||| ||||| |||||||||||||||||| | | |
|
|
| T |
31501516 |
cctcaatttggtgcttgcaagaattagaaaagatccttgaatgcgtccacgtatctaaaaaacatgttctgcctgttttctatgatgttgatcctcccgt |
31501615 |
T |
|
| Q |
219 |
ggtgcgaaagcaaactgggatttatagtgaagcatttgtccaacatgaacacagattcaaacaagactctcaaatggtgctacgatggagggcagctctg |
318 |
Q |
| |
|
|||||||||||||| |||||||||| |||||||||||||| |||||||||| | |||| ||||||||||||| ||||||||| ||||||||| ||||||| |
|
|
| T |
31501616 |
ggtgcgaaagcaaagtgggatttattgtgaagcatttgtcaaacatgaacaaatattccaacaagactctcagatggtgctaagatggagggaagctctg |
31501715 |
T |
|
| Q |
319 |
acacaagtcgccgatctctctg |
340 |
Q |
| |
|
||||||||||||| ||| |||| |
|
|
| T |
31501716 |
acacaagtcgccggtctatctg |
31501737 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 19 - 155
Target Start/End: Original strand, 31488891 - 31489027
Alignment:
| Q |
19 |
gacactaatcttcaaaaaggtgaatccatagcacctgaactctttcatgcaattgaagggtctcaggttttcgttgtggtcttgtcaaagaactacgctt |
118 |
Q |
| |
|
|||||||| ||||||||||||||||| |||||||| || ||| ||| ||||||||||||||||||||||||| ||| |||| | || || ||||| |||| |
|
|
| T |
31488891 |
gacactaagcttcaaaaaggtgaatcgatagcacccgagctcattcgtgcaattgaagggtctcaggttttcattgcggtcctctccaaaaactatgctt |
31488990 |
T |
|
| Q |
119 |
tctcaacttggtgcttgaaagaattggaatacatcct |
155 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||| |
|
|
| T |
31488991 |
cctcaacttggtgcttgcgagaattggaatacatcct |
31489027 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 19 - 155
Target Start/End: Complemental strand, 31030542 - 31030406
Alignment:
| Q |
19 |
gacactaatcttcaaaaaggtgaatccatagcacctgaactctttcatgcaattgaagggtctcaggttttcgttgtggtcttgtcaaagaactacgctt |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||| || ||| ||| ||||||||||||||||||||||||| ||| |||| | || || ||||| |||| |
|
|
| T |
31030542 |
gacactaatcttcaaaaaggtgaatccataccacccgagctcattcgtgcaattgaagggtctcaggttttcattgcggtcctctccaaaaactatgctt |
31030443 |
T |
|
| Q |
119 |
tctcaacttggtgcttgaaagaattggaatacatcct |
155 |
Q |
| |
|
|||||||||||||||| |||||||| | ||||||| |
|
|
| T |
31030442 |
cctcaacttggtgcttgcgagaattggtacacatcct |
31030406 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 19 - 335
Target Start/End: Complemental strand, 31529322 - 31529006
Alignment:
| Q |
19 |
gacactaatcttcaaaaaggtgaatccatagcacctgaactctttcatgcaattgaagggtctcaggttttcgttgtggtcttgtcaaagaactacgctt |
118 |
Q |
| |
|
|||||||| ||| | ||||||||||| ||||||||||||||| ||| ||| || |||| |||| | |||| |||| ||||| ||||| ||||| |||| |
|
|
| T |
31529322 |
gacactaagcttaagaaaggtgaatctatagcacctgaactccttcgtgctatcgaagcctctcggactttcattgttgtcttctcaaacaactatgctt |
31529223 |
T |
|
| Q |
119 |
tctcaacttggtgcttgaaagaattggaatacatcctgtgttgtgttcaagcatctaaaaagtatgttctacctgtgttctatgatgttgatccttcttt |
218 |
Q |
| |
|
|||||||||||||||| |||||| |||||||||| ||| || ||| ||| ||| |||||| ||||| |||||||||||||||||||| |
|
|
| T |
31529222 |
cctcaacttggtgcttgcgggaattgcaatacatccttcattgcgtacaactttctggaaaacgtgttctccctgttttctatgatgttgatccttccga |
31529123 |
T |
|
| Q |
219 |
ggtgcgaaagcaaactgggatttatagtgaagcatttgtccaacatgaacacagattcaaacaagactctcaaatggtgctacgatggagggcagctctg |
318 |
Q |
| |
|
|||||||||||||| ||||| ||||| ||||||||| ||||||||| | ||||||||||||||| || | | ||| | |||||||| ||||||| |
|
|
| T |
31529122 |
ggtgcgaaagcaaagtgggagttataaaaaagcatttgcccaacatgaggaaagattcaaacaagacactgaggtcctgcaaggatggaggacagctctc |
31529023 |
T |
|
| Q |
319 |
acacaagtcgccgatct |
335 |
Q |
| |
|
|| ||||||||| |||| |
|
|
| T |
31529022 |
acgcaagtcgccaatct |
31529006 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 23 - 155
Target Start/End: Complemental strand, 31020657 - 31020525
Alignment:
| Q |
23 |
ctaatcttcaaaaaggtgaatccatagcacctgaactctttcatgcaattgaagggtctcaggttttcgttgtggtcttgtcaaagaactacgctttctc |
122 |
Q |
| |
|
|||||||||||||||||||||||||| |||| || ||| ||| ||||||||||||||||||||||||| ||| |||| | || || ||||| ||| ||| |
|
|
| T |
31020657 |
ctaatcttcaaaaaggtgaatccataccacccgagctcattcgtgcaattgaagggtctcaggttttcattgcggtcctctccaaaaactattcttcctc |
31020558 |
T |
|
| Q |
123 |
aacttggtgcttgaaagaattggaatacatcct |
155 |
Q |
| |
|
||||||||||||| |||||||| | ||||||| |
|
|
| T |
31020557 |
aacttggtgcttgcgagaattggtacacatcct |
31020525 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 34 - 155
Target Start/End: Complemental strand, 31160048 - 31159927
Alignment:
| Q |
34 |
aaaggtgaatccatagcacctgaactctttcatgcaattgaagggtctcaggttttcgttgtggtcttgtcaaagaactacgctttctcaacttggtgct |
133 |
Q |
| |
|
|||||||||||||||||||| || ||| ||||||||||||||| || ||||||| |||| |||| ||||| ||||| |||| |||||| ||||||| |
|
|
| T |
31160048 |
aaaggtgaatccatagcacccgagctccttcatgcaattgaagcctcaaaggtttttattgtactcttctcaaaaaactatgcttcctcaacatggtgct |
31159949 |
T |
|
| Q |
134 |
tgaaagaattggaatacatcct |
155 |
Q |
| |
|
|| ||| |||||||||||||| |
|
|
| T |
31159948 |
tgcgagagttggaatacatcct |
31159927 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 146
Target Start/End: Complemental strand, 31151150 - 31151038
Alignment:
| Q |
34 |
aaaggtgaatccatagcacctgaactctttcatgcaattgaagggtctcaggttttcgttgtggtcttgtcaaagaactacgctttctcaacttggtgct |
133 |
Q |
| |
|
||||||||||||||||||||||||||| ||| |||||||||| |||||| |||| |||||||| || || |||||||| |||| |||| |||||| | |
|
|
| T |
31151150 |
aaaggtgaatccatagcacctgaactccttcgagcaattgaagactctcagatttttgttgtggttttctctaagaactatgcttcctcagtttggtgtt |
31151051 |
T |
|
| Q |
134 |
tgaaagaattgga |
146 |
Q |
| |
|
|| ||||||||| |
|
|
| T |
31151050 |
tgcgagaattgga |
31151038 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 182 - 337
Target Start/End: Complemental strand, 31162277 - 31162122
Alignment:
| Q |
182 |
atgttctacctgtgttctatgatgttgatccttctttggtgcgaaagcaaactgggatttatagtgaagcatttgtccaacatgaacacagattcaaaca |
281 |
Q |
| |
|
||||||| ||||| ||||||||||||||||||| | | || || | |||| || | |||| |||||| ||| || |||||||||| |||||| |||| |
|
|
| T |
31162277 |
atgttctgcctgttttctatgatgttgatccttatgagatgagatatcaaaaaggaaattatgttgaagcctttttcaaacatgaacaaagattccaaca |
31162178 |
T |
|
| Q |
282 |
agactctcaaatggtgctacgatggagggcagctctgacacaagtcgccgatctct |
337 |
Q |
| |
|
||||||| | ||||||| | ||||||||| ||||| |||||||||||| |||||| |
|
|
| T |
31162177 |
agactctgagatggtgcaaagatggagggaagctcaaacacaagtcgccaatctct |
31162122 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 37 - 155
Target Start/End: Original strand, 31482160 - 31482278
Alignment:
| Q |
37 |
ggtgaatccatagcacctgaactctttcatgcaattgaagggtctcaggttttcgttgtggtcttgtcaaagaactacgctttctcaacttggtgcttga |
136 |
Q |
| |
|
|||| |||||||| ||| | |||||||| ||||||||||| |||||| ||||| | ||||||||||| |||| || |||| |||||||||||||||| |
|
|
| T |
31482160 |
ggtgcatccatagaacccgcactctttcgtgcaattgaagtctctcagattttcatcgtggtcttgtctaagagttatgcttcctcaacttggtgcttgc |
31482259 |
T |
|
| Q |
137 |
aagaattggaatacatcct |
155 |
Q |
| |
|
||||||| ||||||||| |
|
|
| T |
31482260 |
gtgaattggtatacatcct |
31482278 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 326
Target Start/End: Original strand, 31489055 - 31489198
Alignment:
| Q |
183 |
tgttctacctgtgttctatgatgttgatccttctttggtgcgaaagcaaactgggatttatagtgaagcatttgtccaacatgaacacagattcaaacaa |
282 |
Q |
| |
|
|||||| ||||| || |||||||||||||||||| |||| || | |||| || ||||| ||||||| ||| | |||||||||| | |||| |||| |
|
|
| T |
31489055 |
tgttcttcctgttttttatgatgttgatccttctgaggtgagacatcaaaaaggaatttacggtgaagccttttccaaacatgaacaaacattccaacat |
31489154 |
T |
|
| Q |
283 |
gactctcaaatggtgctacgatggagggcagctctgacacaagt |
326 |
Q |
| |
|
|||||||| |||| | | ||||||||| ||||||||||||||| |
|
|
| T |
31489155 |
gactctcatgtggtacaaagatggagggaagctctgacacaagt |
31489198 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 183 - 326
Target Start/End: Complemental strand, 31020497 - 31020354
Alignment:
| Q |
183 |
tgttctacctgtgttctatgatgttgatccttctttggtgcgaaagcaaactgggatttatagtgaagcatttgtccaacatgaacacagattcaaacaa |
282 |
Q |
| |
|
|||||| ||||| || |||||||||||||||||| |||| || | |||| || ||||| ||||||| ||| | |||||||||| | |||| |||| |
|
|
| T |
31020497 |
tgttcttcctgttttttatgatgttgatccttctgaggtgagacatcaaaaaggaatttacggtgaagccttttccaaacatgaacaaacattccaacat |
31020398 |
T |
|
| Q |
283 |
gactctcaaatggtgctacgatggagggcagctctgacacaagt |
326 |
Q |
| |
|
|||||||| |||| | | | ||||||| ||||||||||||||| |
|
|
| T |
31020397 |
gactctcatgtggtacaaagttggagggaagctctgacacaagt |
31020354 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 340
Target Start/End: Complemental strand, 31151001 - 31150844
Alignment:
| Q |
183 |
tgttctacctgtgttctatgatgttgatccttctttggtgcgaaagcaaactgggatttatagtgaagcatttgtccaacatgaacacagattcaaacaa |
282 |
Q |
| |
|
|||||| ||||||||||||||||||||||| || ||||||| | |||| || |||| |||||| || | |||||||| | |||||| ||||| |
|
|
| T |
31151001 |
tgttctgcctgtgttctatgatgttgatccatcagaggtgcgatatcaaaaaggatgttatgctgaagccttagctaaacatgaagaaagattccaacaa |
31150902 |
T |
|
| Q |
283 |
gactctcaaatggtgctacgatggagggcagctctgacacaagtcgccgatctctctg |
340 |
Q |
| |
|
||| | |||| |||| | ||||||||| ||| ||||||||||| ||| ||||||||| |
|
|
| T |
31150901 |
aactttgaaattgtgcaaagatggagggaagcactgacacaagtggccaatctctctg |
31150844 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 74; Significance: 7e-34; HSPs: 15)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 24 - 288
Target Start/End: Complemental strand, 33060340 - 33060076
Alignment:
| Q |
24 |
taatcttcaaaaaggtgaatccatagcacctgaactctttcatgcaattgaagggtctcaggttttcgttgtggtcttgtcaaagaactacgctttctca |
123 |
Q |
| |
|
|||||||||||||||||||| ||||| |||||| || |||| |||||| ||| |||||||||| ||||| | |||| ||||||||||| |||| |||| |
|
|
| T |
33060340 |
taatcttcaaaaaggtgaatgcataggacctgagctttttcgtgcaatcgaaatatctcaggtttacgttgcgatcttctcaaagaactatgcttcctca |
33060241 |
T |
|
| Q |
124 |
acttggtgcttgaaagaattggaatacatcctgtgt-tgtgttcaagcatctaaaaagtatgttctacctgtgttctatgatgttgatccttctttggtg |
222 |
Q |
| |
|
|| ||||||||| ||||||| ||| | || |||| || || | | || ||| ||||||| ||||| ||||||||||||||||||||| |||| |
|
|
| T |
33060240 |
acgtggtgcttgcaagaattagaaaagata-tgtgaatgcattaaggggtcgggaaaacatgttcttcctgttttctatgatgttgatccttctgaggtg |
33060142 |
T |
|
| Q |
223 |
cgaaagcaaactgggatttatagtgaagcatttgtccaacatgaacacagattcaaacaagactct |
288 |
Q |
| |
|
|| ||||||| ||| |||||||||||||| |||||| |||||||||| |||||| ||||||||||| |
|
|
| T |
33060141 |
cggaagcaaagtggaatttatagtgaagcttttgtcaaacatgaacaaagattccaacaagactct |
33060076 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 19 - 315
Target Start/End: Complemental strand, 33412708 - 33412412
Alignment:
| Q |
19 |
gacactaatcttcaaaaaggtgaatccatagcacctgaactctttcatgcaattgaagggtctcaggttttcgttgtggtcttgtcaaagaactacgctt |
118 |
Q |
| |
|
||||| |||||| ||||||||||| ||||| |||||| ||| ||| |||||| ||||| |||||||||||||| | ||||| |||| |||||| |||| |
|
|
| T |
33412708 |
gacacaaatcttaaaaaaggtgaagtcataggacctgagctccttcgtgcaatcgaaggatctcaggttttcgtcgcagtcttttcaaggaactatgctt |
33412609 |
T |
|
| Q |
119 |
tctcaacttggtgcttgaaagaattggaatacatcctgtgt-tgtgttcaagcatctaaaaagtatgttctacctgtgttctatgatgttgatccttctt |
217 |
Q |
| |
|
|||||| |||||| || ||||||| ||| | ||| |||| |||||||| | | || |||| | ||||| ||||| || |||||| ||||||||||| |
|
|
| T |
33412608 |
cctcaacatggtgcctgcaagaattagaaaagatc-tgtgaatgtgttcagggacctgaaaaacacgttcttcctgttttttatgatattgatccttctg |
33412510 |
T |
|
| Q |
218 |
tggtgcgaaagcaaactgggatttatagtgaagcatttgtccaacatgaacacagattcaaacaagactctcaaatggtgctacgatggagggcagct |
315 |
Q |
| |
|
|||||| ||||||| |||||||||| ||||| | |||||| |||||||||| |||||| |||||||| |||| | |||| | ||||||||| |||| |
|
|
| T |
33412509 |
aggtgcggaagcaaagtgggatttattgtgaatcttttgtcaaacatgaacaaagattccaacaagaccctcataaggtgtcaagatggagggaagct |
33412412 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 19 - 310
Target Start/End: Complemental strand, 33288365 - 33288074
Alignment:
| Q |
19 |
gacactaatcttcaaaaaggtgaatccatagcacctgaactctttcatgcaattgaagggtctcaggttttcgttgtggtcttgtcaaagaactacgctt |
118 |
Q |
| |
|
||||| ||||||||||||||||||||||||| |||||| ||| ||| ||||| ||||| || ||||||||||||| || || |||| ||||| |||| |
|
|
| T |
33288365 |
gacaccaatcttcaaaaaggtgaatccataggacctgagctccttcgagcaatcgaaggatcccaggttttcgttgcagtattctcaagaaactatgctt |
33288266 |
T |
|
| Q |
119 |
tctcaacttggtgcttgaaagaattggaatacatcctgtgt-tgtgttcaagcatctaaaaagtatgttctacctgtgttctatgatgttgatccttctt |
217 |
Q |
| |
|
|||||| ||||||||| | ||||| ||| | || |||| |||||||| | ||| | ||| | |||| || || ||||||||||||||||||||| |
|
|
| T |
33288265 |
cctcaacatggtgcttgcaggaattagaaaagata-tgtgaatgtgttcatgtatcaagaaaacacattcttccagttttctatgatgttgatccttctg |
33288167 |
T |
|
| Q |
218 |
tggtgcgaaagcaaactgggatttatagtgaagcatttgtccaacatgaacacagattcaaacaagactctcaaatggtgctacgatggaggg |
310 |
Q |
| |
|
|||||||||||||| |||||||||| ||||||| ||| | ||||||||| | |||| ||||||||||||| |||||| | ||||||||| |
|
|
| T |
33288166 |
aggtgcgaaagcaaagtgggatttatggtgaagcctttaccatacatgaacaaacattccaacaagactctcagatggtgtcaagatggaggg |
33288074 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 19 - 317
Target Start/End: Complemental strand, 33307276 - 33306978
Alignment:
| Q |
19 |
gacactaatcttcaaaaaggtgaatccatagcacctgaactctttcatgcaattgaagggtctcaggttttcgttgtggtcttgtcaaagaactacgctt |
118 |
Q |
| |
|
||||||||||||||||| |||||||| |||| |||||| ||| ||| ||||| ||||| |||| |||||| |||| ||||| |||| |||||| |||| |
|
|
| T |
33307276 |
gacactaatcttcaaaagggtgaatctatagaacctgagctccttcgagcaatcgaaggatctcgggtttttgttgcagtcttctcaaggaactatgctt |
33307177 |
T |
|
| Q |
119 |
tctcaacttggtgcttgaaagaattggaatacatcctgtgt-tgtgttcaagcatctaaaaagtatgttctacctgtgttctatgatgttgatccttctt |
217 |
Q |
| |
|
|||||| |||||| || ||||||| || | || ||| || ||||| ||| | ||| || |||| ||||| || |||||||||||||||||| |
|
|
| T |
33307176 |
cctcaacatggtgcctgcaagaattagagaagata-tgtaaatgcgttcagagatccagaaaacatattcttcctgttttttatgatgttgatccttctg |
33307078 |
T |
|
| Q |
218 |
tggtgcgaaagcaaactgggatttatagtgaagcatttgtccaacatgaacacagattcaaacaagactctcaaatggtgctacgatggagggcagctct |
317 |
Q |
| |
|
|||| |||||||||| |||||||||| ||||||| |||||| |||||||||| |||||| ||||||||| | | |||||| | ||||||||| |||||| |
|
|
| T |
33307077 |
tggttcgaaagcaaagtgggatttattgtgaagcctttgtcaaacatgaacaaagattccaacaagactttgagatggtgtcaagatggagggaagctct |
33306978 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 182 - 297
Target Start/End: Complemental strand, 9169485 - 9169370
Alignment:
| Q |
182 |
atgttctacctgtgttctatgatgttgatccttctttggtgcgaaagcaaactgggatttatagtgaagcatttgtccaacatgaacacagattcaaaca |
281 |
Q |
| |
|
||||||| | ||| ||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||| | |||||||||| ||||||||| | |
|
|
| T |
9169485 |
atgttcttcttgttttctatgatgttgatccttctgaggtgcgaaagcaaagtgggatttattgtgaagcatttgccaaacatgaacaaagattcaaata |
9169386 |
T |
|
| Q |
282 |
agactctcaaatggtg |
297 |
Q |
| |
|
||| ||||| |||||| |
|
|
| T |
9169385 |
agattctcacatggtg |
9169370 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 288
Target Start/End: Complemental strand, 33361288 - 33361019
Alignment:
| Q |
19 |
gacactaatcttcaaaaaggtgaatccatagcacctgaactctttcatgcaattgaagggtctcaggttttcgttgtggtcttgtcaaagaactacgctt |
118 |
Q |
| |
|
||||||||||||| ||||||||||||||| | ||| || ||| ||| ||||| ||||| ||||||||||| |||| |||| |||| ||||| |||| |
|
|
| T |
33361288 |
gacactaatcttccaaaaggtgaatccatcggacccgagctcattcgagcaatcgaaggatctcaggtttttgttgcattcttttcaagaaactatgctt |
33361189 |
T |
|
| Q |
119 |
tctcaacttggtgcttgaaagaattggaatacatcctgtg-ttgtgttcaagcatctaaaaagtatgttctacctgtgttctatgatgttgatccttctt |
217 |
Q |
| |
|
|||||| ||||| ||| ||||||| ||| | || |||| || || | | ||| ||| ||||||| ||||| ||||||||||||||||||||| |
|
|
| T |
33361188 |
cctcaacatggtgtttgcaagaattagaaaagat-atgtgaatgcattaagggatcaggaaaacatgttcttcctgttttctatgatgttgatccttctg |
33361090 |
T |
|
| Q |
218 |
tggtgcgaaagcaaactgggatttatagtgaagcatttgtccaacatgaacacagattcaaacaagactct |
288 |
Q |
| |
|
|||||| ||||||| || ||||||||||||||| |||||| |||||||||| |||||| ||||||||||| |
|
|
| T |
33361089 |
aggtgcggaagcaaagtgagatttatagtgaagcttttgtcaaacatgaacaaagattccaacaagactct |
33361019 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 25 - 326
Target Start/End: Complemental strand, 33390857 - 33390556
Alignment:
| Q |
25 |
aatcttcaaaaaggtgaatccatagcacctgaactctttcatgcaattgaagggtctcaggttttcgttgtggtcttgtcaaagaactacgctttctcaa |
124 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||| |||| |||| ||||| |||||||||| |||| ||| || |||| ||||| |||||||||| |
|
|
| T |
33390857 |
aatcttcaaaaaggtgaatccataggacctgaacttcttcaatcaatcgaaggatctcaggtttatgttgcggttttctcaagaaactatgctttctcaa |
33390758 |
T |
|
| Q |
125 |
cttggtgcttgaaagaattggaatacatcctgtgttgtgttcaagcatctaaaaagtatgttctacctgtgttctatgatgttgatccttctttggtgcg |
224 |
Q |
| |
|
| ||||| ||| ||||| | || | || | ||||| |||| ||| |||| |||||| ||||| || |||||||||||||||||| ||| || |
|
|
| T |
33390757 |
catggtgtttgcaagaaatagagaagatttgggaatgtgtccaaggatccgaaaaacttgttcttcctgttttttatgatgttgatccttctgaggttcg |
33390658 |
T |
|
| Q |
225 |
aaagcaaactgggatttatagtgaagcatttgtccaacatgaacacagattcaaacaagactctcaaatggtgctacgatggagggcagctctgacacaa |
324 |
Q |
| |
|
|||||||| ||| |||||| | |||| |||||| |||||||||| |||||| ||||| ||||||| |||||| | ||||||| | |||||| | |||| |
|
|
| T |
33390657 |
aaagcaaagtggaatttatgataaagcttttgtcaaacatgaacaaagattccaacaaaactctcagatggtgtcaagatggagagaagctctaaaacaa |
33390558 |
T |
|
| Q |
325 |
gt |
326 |
Q |
| |
|
|| |
|
|
| T |
33390557 |
gt |
33390556 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 19 - 326
Target Start/End: Complemental strand, 33403401 - 33403094
Alignment:
| Q |
19 |
gacactaatcttcaaaaaggtgaatccatagcacctgaactctttcatgcaattgaagggtctcaggttttcgttgtggtcttgtcaaagaactacgctt |
118 |
Q |
| |
|
||||||||||||||| | ||||||||| ||| ||| || || ||| ||||| |||| | ||||||||||||||| ||||| |||| |||||| |||| |
|
|
| T |
33403401 |
gacactaatcttcaacagggtgaatccttagaacccgagcttcttcgagcaatcaaaggatttcaggttttcgttgtcgtcttttcaaggaactatgctt |
33403302 |
T |
|
| Q |
119 |
tctcaacttggtgcttgaaagaattggaatacatcctgtgt-tgtgttcaagcatctaaaaagtatgttctacctgtgttctatgatgttgatccttctt |
217 |
Q |
| |
|
|||||| |||||||| |||||||| || | || |||| || ||| | | ||| ||||| ||||| | ||||| ||||||||||||||||||||| |
|
|
| T |
33403301 |
cctcaacatggtgcttaaaagaattagagaagata-tgtgaatgcgttaagggatccaaaaaacatgttattcctgttttctatgatgttgatccttctg |
33403203 |
T |
|
| Q |
218 |
tggtgcgaaagcaaactgggatttatagtgaagcatttgtccaacatgaacacagattcaaacaagactctcaaatggtgctacgatggagggcagctct |
317 |
Q |
| |
|
||| |||||||||| ||| |||||| ||||||| |||||| | |||||| | |||||| |||||| || | | |||||| | ||||||||| |||||| |
|
|
| T |
33403202 |
aggttcgaaagcaaagtggtatttattgtgaagcctttgtcaagcatgaaaaaagattccaacaaggctttgagatggtgtcaagatggagggaagctct |
33403103 |
T |
|
| Q |
318 |
gacacaagt |
326 |
Q |
| |
|
| |||||| |
|
|
| T |
33403102 |
aaaacaagt |
33403094 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 182 - 326
Target Start/End: Original strand, 33642070 - 33642214
Alignment:
| Q |
182 |
atgttctacctgtgttctatgatgttgatccttctttggtgcgaaagcaaactgggatttatagtgaagcatttgtccaacatgaacacagattcaaaca |
281 |
Q |
| |
|
||||||| ||| | || |||||||||||||||||| ||| |||||||||| ||| |||||| | ||||| |||||| |||||||||| |||||| |||| |
|
|
| T |
33642070 |
atgttcttcctattttttatgatgttgatccttctgaggtacgaaagcaaagtggaatttattgggaagcttttgtcaaacatgaacaaagattccaaca |
33642169 |
T |
|
| Q |
282 |
agactctcaaatggtgctacgatggagggcagctctgacacaagt |
326 |
Q |
| |
|
||||| |||||||||| | ||||||||| |||||| | |||||| |
|
|
| T |
33642170 |
agactttcaaatggtgtcaagatggagggaagctctaaaacaagt |
33642214 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 182 - 326
Target Start/End: Original strand, 31566577 - 31566721
Alignment:
| Q |
182 |
atgttctacctgtgttctatgatgttgatccttctttggtgcgaaagcaaactgggatttatagtgaagcatttgtccaacatgaacacagattcaaaca |
281 |
Q |
| |
|
||||||| | ||| ||||||||||||||||||||| ||| |||||||||| |||||||||| |||||| |||| | |||||||||| |||||| ||| |
|
|
| T |
31566577 |
atgttcttcttgttttctatgatgttgatccttctgaggttcgaaagcaaagtgggatttattctgaagcttttgccaaacatgaacaaagattccgaca |
31566676 |
T |
|
| Q |
282 |
agactctcaaatggtgctacgatggagggcagctctgacacaagt |
326 |
Q |
| |
|
||||||||| |||||| | ||||||| | |||||| | |||||| |
|
|
| T |
31566677 |
agactctcagatggtgtcaagatggagagaagctctaaaacaagt |
31566721 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 19 - 155
Target Start/End: Complemental strand, 12781539 - 12781403
Alignment:
| Q |
19 |
gacactaatcttcaaaaaggtgaatccatagcacctgaactctttcatgcaattgaagggtctcaggttttcgttgtggtcttgtcaaagaactacgctt |
118 |
Q |
| |
|
|||||||| ||| ||||||| |||| ||||||||| | ||||||| |||||||||| |||||||||| | |||| || || || |||||||| |||| |
|
|
| T |
12781539 |
gacactaaacttaaaaaaggcgaattcatagcacccggactctttagagcaattgaagcctctcaggtttacattgttgtattctctaagaactatgctt |
12781440 |
T |
|
| Q |
119 |
tctcaacttggtgcttgaaagaattggaatacatcct |
155 |
Q |
| |
|
|||||||||||| ||| |||||||||||||||||| |
|
|
| T |
12781439 |
cctcaacttggtgtttgcgagaattggaatacatcct |
12781403 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 19 - 155
Target Start/End: Complemental strand, 12782290 - 12782154
Alignment:
| Q |
19 |
gacactaatcttcaaaaaggtgaatccatagcacctgaactctttcatgcaattgaagggtctcaggttttcgttgtggtcttgtcaaagaactacgctt |
118 |
Q |
| |
|
||||||||||||||||||||| | ||||||||| | || ||| |||| ||||||||||| |||||||||||| |||| || || || || ||||| |||| |
|
|
| T |
12782290 |
gacactaatcttcaaaaaggtaattccatagcatccgacctcattcaagcaattgaaggctctcaggttttcattgttgtattctctaaaaactatgctt |
12782191 |
T |
|
| Q |
119 |
tctcaacttggtgcttgaaagaattggaatacatcct |
155 |
Q |
| |
|
||||||||||| ||| |||||| | ||||||||| |
|
|
| T |
12782190 |
cttcaacttggtgtttgcgagaattagcatacatcct |
12782154 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 19 - 284
Target Start/End: Complemental strand, 33265672 - 33265407
Alignment:
| Q |
19 |
gacactaatcttcaaaaaggtgaatccatagcacctgaactctttcatgcaattgaagggtctcaggttttcgttgtggtcttgtcaaagaactacgctt |
118 |
Q |
| |
|
||||||||||||| ||||||||||||||| | ||| || ||| ||| ||||| ||||| ||||| ||||| |||| |||||| |||| ||||| |||| |
|
|
| T |
33265672 |
gacactaatcttccaaaaggtgaatccattggacccgagctccttcgagcaatcgaaggatctcaagtttttgttgcggtcttttcaataaactatgctt |
33265573 |
T |
|
| Q |
119 |
tctcaacttggtgcttgaaagaattggaatacatcctgtgt-tgtgttcaagcatctaaaaagtatgttctacctgtgttctatgatgttgatccttctt |
217 |
Q |
| |
|
|||||| ||||| || ||||||| ||| | || |||| || ||| | | ||| ||| ||||||| || || ||||||||||||||||| ||| |
|
|
| T |
33265572 |
cctcaacatggtgtttacaagaattagaaaagata-tgtgaatgcgttaagggatcaggaaaacatgttcttccagttttctatgatgttgatccctctg |
33265474 |
T |
|
| Q |
218 |
tggtgcgaaagcaaactgggatttatagtgaagcatttgtccaacatgaacacagattcaaacaaga |
284 |
Q |
| |
|
||| ||||||||| |||||||||| ||||||| ||| || |||||||||| |||||| ||||||| |
|
|
| T |
33265473 |
atgtgagaaagcaaagtgggatttatggtgaagcctttatcaaacatgaacaaagattccaacaaga |
33265407 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 19 - 284
Target Start/End: Complemental strand, 33274816 - 33274551
Alignment:
| Q |
19 |
gacactaatcttcaaaaaggtgaatccatagcacctgaactctttcatgcaattgaagggtctcaggttttcgttgtggtcttgtcaaagaactacgctt |
118 |
Q |
| |
|
||||||||||||| ||||||||||||||| | ||| || ||| ||| ||||| ||||| ||||| ||||| |||| |||||| |||| ||||| |||| |
|
|
| T |
33274816 |
gacactaatcttccaaaaggtgaatccattggacccgagctccttcgagcaatcgaaggatctcaagtttttgttgcggtcttttcaataaactatgctt |
33274717 |
T |
|
| Q |
119 |
tctcaacttggtgcttgaaagaattggaatacatcctgtgt-tgtgttcaagcatctaaaaagtatgttctacctgtgttctatgatgttgatccttctt |
217 |
Q |
| |
|
|||||| ||||| || ||||||| ||| | || |||| || ||| | | ||| ||| ||||||| || || ||||||||||||||||| ||| |
|
|
| T |
33274716 |
cctcaacatggtgtttacaagaattagaaaagata-tgtgaatgcgttaagggatcaggaaaacatgttcttccagttttctatgatgttgatccctctg |
33274618 |
T |
|
| Q |
218 |
tggtgcgaaagcaaactgggatttatagtgaagcatttgtccaacatgaacacagattcaaacaaga |
284 |
Q |
| |
|
||| ||||||||| |||||||||| ||||||| ||| || |||||||||| |||||| ||||||| |
|
|
| T |
33274617 |
atgtgagaaagcaaagtgggatttatggtgaagcctttatcaaacatgaacaaagattccaacaaga |
33274551 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 155
Target Start/End: Complemental strand, 12785729 - 12785593
Alignment:
| Q |
19 |
gacactaatcttcaaaaaggtgaatccatagcacctgaactctttcatgcaattgaagggtctcaggttttcgttgtggtcttgtcaaagaactacgctt |
118 |
Q |
| |
|
|||||||| ||| |||||||||||| ||||||||| | ||||||| |||||||||| |||||| ||| | |||| || || || |||||||| |||| |
|
|
| T |
12785729 |
gacactaaacttaaaaaaggtgaattcatagcacccggactctttagagcaattgaagcctctcagctttacattgttgtattctctaagaactatgctt |
12785630 |
T |
|
| Q |
119 |
tctcaacttggtgcttgaaagaattggaatacatcct |
155 |
Q |
| |
|
||||||||||| ||| |||||||||||||||||| |
|
|
| T |
12785629 |
cttcaacttggtgtttgcgagaattggaatacatcct |
12785593 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 19 - 285
Target Start/End: Original strand, 17437979 - 17438245
Alignment:
| Q |
19 |
gacactaatcttcaaaaaggtgaatccatagcacctgaactctttcatgcaattgaagggtctcaggttttcgttgtggtcttgtcaaagaactacgctt |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||| | |||| || ||| ||||| ||||| ||||||||||| |||| ||| || |||| |||| |||| |
|
|
| T |
17437979 |
gacactaatcttcaaaaaggtgaatccataggatctgagcttcttcgagcaatagaaggatctcaggtttttgttgcggttttctcaagatactatgctt |
17438078 |
T |
|
| Q |
119 |
tctcaacttggtgcttgaaagaattggaatacatcctgtgt-tgtgttcaagcatctaaaaagtatgttctacctgtgttctatgatgttgatccttctt |
217 |
Q |
| |
|
|||||| ||||| ||| ||||||| ||| | || |||| || ||||| | | ||| ||||||| ||||| ||||||||||||||||||||| |
|
|
| T |
17438079 |
cctcaacatggtgtttggaagaattagaaaagata-tgtgaatgcgttcaggtgccaggaaaacatgttcttcctgttttctatgatgttgatccttctg |
17438177 |
T |
|
| Q |
218 |
tggtgcgaaagcaaactgggatttatagtgaagcatttgtccaacatgaacacagattcaaacaagac |
285 |
Q |
| |
|
|||||||||||||| |||||||||| |||||| |||||| |||||||||| |||||| |||||||| |
|
|
| T |
17438178 |
aggtgcgaaagcaaagtgggatttatcatgaagcttttgtcaaacatgaacaaagattccaacaagac |
17438245 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1749 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold1749
Description:
Target: scaffold1749; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 143
Target Start/End: Complemental strand, 936 - 812
Alignment:
| Q |
19 |
gacactaatcttcaaaaaggtgaatccatagcacctgaactctttcatgcaattgaagggtctcaggttttcgttgtggtcttgtcaaagaactacgctt |
118 |
Q |
| |
|
||||| ||||||| ||| ||||||||||||| |||||| ||| ||| |||| ||||| |||||||||||||||| ||||| |||| ||||| |||| |
|
|
| T |
936 |
gacacaaatcttccaaagggtgaatccataggacctgagctccttcgaacaatcgaaggatctcaggttttcgttgctgtcttatcaagaaactatgctt |
837 |
T |
|
| Q |
119 |
tctcaacttggtgcttgaaagaatt |
143 |
Q |
| |
|
||||| |||||| || ||||||| |
|
|
| T |
836 |
cttcaacatggtgcctgcaagaatt |
812 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1749; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 317
Target Start/End: Complemental strand, 774 - 638
Alignment:
| Q |
181 |
tatgttctacctgtgttctatgatgttgatccttctttggtgcgaaagcaaactgggatttatagtgaagcatttgtccaacatgaacacagattcaaac |
280 |
Q |
| |
|
|||||||| ||| | ||||||| ||| ||||||||| ||| |||||||| |||||||||| | || | |||| | |||||||||| |||||||||| |
|
|
| T |
774 |
tatgttcttcctattttctatggtgtcgatccttctgaggtaaaaaagcaaagtgggatttattgggacgattttgccaaacatgaacaaagattcaaac |
675 |
T |
|
| Q |
281 |
aagactctcaaatggtgctacgatggagggcagctct |
317 |
Q |
| |
|
||||| |||| | |||| | ||||||||| |||||| |
|
|
| T |
674 |
aagaccctcataaggtgtcaagatggagggaagctct |
638 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0428 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0428
Description:
Target: scaffold0428; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 143
Target Start/End: Complemental strand, 9697 - 9573
Alignment:
| Q |
19 |
gacactaatcttcaaaaaggtgaatccatagcacctgaactctttcatgcaattgaagggtctcaggttttcgttgtggtcttgtcaaagaactacgctt |
118 |
Q |
| |
|
||||| ||||||| ||| ||||||||||||| |||||| ||| ||| |||| ||||| |||||||||||||||| ||||| |||| ||||| |||| |
|
|
| T |
9697 |
gacacaaatcttccaaagggtgaatccataggacctgagctccttcgaacaatcgaaggatctcaggttttcgttgctgtcttatcaagaaactatgctt |
9598 |
T |
|
| Q |
119 |
tctcaacttggtgcttgaaagaatt |
143 |
Q |
| |
|
||||| |||||| || ||||||| |
|
|
| T |
9597 |
cttcaacatggtgcctgcaagaatt |
9573 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0428; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 317
Target Start/End: Complemental strand, 9535 - 9399
Alignment:
| Q |
181 |
tatgttctacctgtgttctatgatgttgatccttctttggtgcgaaagcaaactgggatttatagtgaagcatttgtccaacatgaacacagattcaaac |
280 |
Q |
| |
|
|||||||| ||| | ||||||| ||| ||||||||| ||| |||||||| |||||||||| | || | |||| | |||||||||| |||||||||| |
|
|
| T |
9535 |
tatgttcttcctattttctatggtgtcgatccttctgaggtaaaaaagcaaagtgggatttattgggacgattttgccaaacatgaacaaagattcaaac |
9436 |
T |
|
| Q |
281 |
aagactctcaaatggtgctacgatggagggcagctct |
317 |
Q |
| |
|
||||| |||| | |||| | ||||||||| |||||| |
|
|
| T |
9435 |
aagaccctcataaggtgtcaagatggagggaagctct |
9399 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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