View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10132_low_22 (Length: 322)
Name: NF10132_low_22
Description: NF10132
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10132_low_22 |
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Alignment Details
Target: chr1 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 7 - 306
Target Start/End: Original strand, 51587589 - 51587889
Alignment:
| Q |
7 |
gaagcataggctatggcatgaacacatacggatattgacacgacaccaataatgtcaaaaacattgaacattgacaagggttaaggagttggaggttcaa |
106 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51587589 |
gaagcacaggctatggcatgaacacatacggatattgacacgacaccaataatgtcaaaaacattgaacattgacaagggttaaggagttggaggttcaa |
51587688 |
T |
|
| Q |
107 |
gaatcaagtcctagcaa--agagnnnnnnnnnctaataacatattaacattttccattcnnnnnnnnnnnnnnnnnnttaggtgcttcagacacgagaca |
204 |
Q |
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||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
51587689 |
gaatcaagtcctagcaaagagagaaaaaaaaactaataacatattaacattttccattc-aaaaaaaaaaaaaaaaattaggtgcttcagacacgagaca |
51587787 |
T |
|
| Q |
205 |
cgcctaataccacaggtgtccactcttcatagattagaaccatttagaaaagctaaaatcaaaaccaaattatcctccaaacgatcacacacacgcaaca |
304 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
51587788 |
cgcctaataccacaggtgtccacccttcatagattagaaccatttagaaaagctaaaatcaaaaccaaattatcctccaaacgatcacacacacacaaca |
51587887 |
T |
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| Q |
305 |
tt |
306 |
Q |
| |
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|| |
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| T |
51587888 |
tt |
51587889 |
T |
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