View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10132_low_29 (Length: 266)

Name: NF10132_low_29
Description: NF10132
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10132_low_29
NF10132_low_29
[»] chr1 (18 HSPs)
chr1 (13-266)||(5858567-5858823)
chr1 (220-266)||(37538728-37538774)
chr1 (217-266)||(34102167-34102216)
chr1 (220-266)||(43359609-43359655)
chr1 (218-266)||(35366399-35366447)
chr1 (217-264)||(4672796-4672843)
chr1 (217-264)||(6785353-6785400)
chr1 (217-264)||(6786734-6786781)
chr1 (217-264)||(7468170-7468217)
chr1 (217-264)||(28016961-28017008)
chr1 (216-263)||(44149050-44149097)
chr1 (219-264)||(12449153-12449198)
chr1 (219-264)||(32624192-32624237)
chr1 (219-264)||(39555772-39555817)
chr1 (217-266)||(45840244-45840293)
chr1 (217-266)||(46804727-46804776)
chr1 (218-266)||(7397624-7397672)
chr1 (220-264)||(37735607-37735651)
[»] chr4 (8 HSPs)
chr4 (220-266)||(49080172-49080218)
chr4 (217-264)||(17186992-17187039)
chr4 (219-264)||(2229175-2229220)
chr4 (217-266)||(8013278-8013327)
chr4 (219-264)||(14332687-14332732)
chr4 (219-264)||(26916253-26916298)
chr4 (219-264)||(47867807-47867852)
chr4 (219-263)||(47516383-47516427)
[»] chr6 (7 HSPs)
chr6 (217-266)||(5822217-5822266)
chr6 (217-266)||(5881948-5881997)
chr6 (220-266)||(4987860-4987906)
chr6 (217-266)||(1130433-1130482)
chr6 (219-264)||(3095907-3095952)
chr6 (219-264)||(21542348-21542393)
chr6 (218-266)||(5300789-5300836)
[»] chr5 (7 HSPs)
chr5 (219-264)||(6686313-6686358)
chr5 (219-264)||(842752-842797)
chr5 (217-266)||(32079421-32079470)
chr5 (218-266)||(8225361-8225409)
chr5 (217-264)||(9957633-9957680)
chr5 (217-264)||(42273546-42273593)
chr5 (217-266)||(16153541-16153590)
[»] chr3 (12 HSPs)
chr3 (217-266)||(38401294-38401343)
chr3 (217-265)||(21214155-21214203)
chr3 (218-266)||(22479209-22479257)
chr3 (217-264)||(7866659-7866706)
chr3 (217-266)||(49583879-49583928)
chr3 (218-266)||(54725758-54725806)
chr3 (217-264)||(14752384-14752431)
chr3 (220-266)||(47444131-47444177)
chr3 (219-264)||(11054453-11054498)
chr3 (217-266)||(22456163-22456212)
chr3 (217-266)||(32070161-32070209)
chr3 (218-258)||(20847454-20847494)
[»] chr2 (7 HSPs)
chr2 (217-266)||(38070912-38070961)
chr2 (220-264)||(45085188-45085232)
chr2 (217-264)||(19263996-19264043)
chr2 (219-264)||(6110386-6110431)
chr2 (219-264)||(28599334-28599379)
chr2 (218-266)||(26998234-26998282)
chr2 (218-266)||(32010019-32010067)
[»] chr8 (11 HSPs)
chr8 (217-264)||(13143659-13143706)
chr8 (217-266)||(17314744-17314793)
chr8 (219-266)||(8673298-8673345)
chr8 (217-264)||(34890392-34890439)
chr8 (222-264)||(33563728-33563770)
chr8 (220-266)||(38072114-38072160)
chr8 (217-266)||(5217306-5217355)
chr8 (219-264)||(7022590-7022635)
chr8 (219-264)||(7858456-7858501)
chr8 (217-266)||(17713137-17713186)
chr8 (234-266)||(27819590-27819622)
[»] scaffold0132 (2 HSPs)
scaffold0132 (218-264)||(910-956)
scaffold0132 (218-264)||(8870-8916)
[»] chr7 (5 HSPs)
chr7 (220-266)||(3775772-3775818)
chr7 (220-266)||(24151774-24151820)
chr7 (218-264)||(25944474-25944520)
chr7 (219-264)||(18102459-18102504)
chr7 (219-264)||(35923182-35923227)
[»] scaffold0774 (1 HSPs)
scaffold0774 (223-264)||(3614-3655)
[»] scaffold0045 (1 HSPs)
scaffold0045 (219-264)||(77887-77932)


Alignment Details
Target: chr1 (Bit Score: 145; Significance: 2e-76; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 13 - 266
Target Start/End: Complemental strand, 5858823 - 5858567
Alignment:
Q  13 caaagggggagaagtgaccttatatagaagaagtagtgcatcttgttgagtgtga-aggcttggaggtttcagataagaaaagtggagttctaattttgt 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||||    
T  5858823 caaagggggagaagtgaccttatatagaagaagtagtgcatcttgttgagtgaattaggcttggaggtttcagataagaaaagtggagttctaattttgt 5858724  T
Q  112 atgcacatnnnnnnnnncatataaattggtgggaactattcttttaaaaggaagtaggggaggaaattaaataatactctcagtcccagattataag-nn 210  Q
    ||||||||         |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||       
T  5858723 atgcacataaaaaaaaacatataaattggtgggaactattcttttaaaaggaagtaggggaggaaattaaataatactctctgtcccaaattataagcaa 5858624  T
Q  211 nnnnntctcattttctctgtcccaaattataaac-aaaaaagataaacttttatcat 266  Q
          |||||||||| | ||||||||||||| | |||||||| |||||||||||||    
T  5858623 aaaaaactcattttctttatcccaaattataagcaaaaaaagacaaacttttatcat 5858567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 220 - 266
Target Start/End: Original strand, 37538728 - 37538774
Alignment:
Q  220 attttctctgtcccaaattataaacaaaaaagataaacttttatcat 266  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||    
T  37538728 attttctttgtcccaaattataaacaaaaaagatcaacttttatcat 37538774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 266
Target Start/End: Complemental strand, 34102216 - 34102167
Alignment:
Q  217 ctcattttctctgtcccaaattataaacaaaaaagataaacttttatcat 266  Q
    ||||||||||||||  |||||||||||||||||||| |||||||||||||    
T  34102216 ctcattttctctgtatcaaattataaacaaaaaagacaaacttttatcat 34102167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 220 - 266
Target Start/End: Original strand, 43359609 - 43359655
Alignment:
Q  220 attttctctgtcccaaattataaacaaaaaagataaacttttatcat 266  Q
    ||||||| |||| |||||||||||||||||||||||| |||||||||    
T  43359609 attttctttgtctcaaattataaacaaaaaagataaatttttatcat 43359655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 218 - 266
Target Start/End: Complemental strand, 35366447 - 35366399
Alignment:
Q  218 tcattttctctgtcccaaattataaacaaaaaagataaacttttatcat 266  Q
    ||||||||| ||||| ||||||||| |||||||||| ||||||||||||    
T  35366447 tcattttctttgtccaaaattataagcaaaaaagatcaacttttatcat 35366399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 217 - 264
Target Start/End: Original strand, 4672796 - 4672843
Alignment:
Q  217 ctcattttctctgtcccaaattataaacaaaaaagataaacttttatc 264  Q
    |||||||||| ||||||||| ||||| ||||||||||||| |||||||    
T  4672796 ctcattttctttgtcccaaaatataagcaaaaaagataaatttttatc 4672843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 217 - 264
Target Start/End: Original strand, 6785353 - 6785400
Alignment:
Q  217 ctcattttctctgtcccaaattataaacaaaaaagataaacttttatc 264  Q
    |||||||||| |||| |||| ||||| |||||||||||||||||||||    
T  6785353 ctcattttctttgtcacaaaatataagcaaaaaagataaacttttatc 6785400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 217 - 264
Target Start/End: Original strand, 6786734 - 6786781
Alignment:
Q  217 ctcattttctctgtcccaaattataaacaaaaaagataaacttttatc 264  Q
    |||||||||| ||||||||| ||||| ||||||||| |||||||||||    
T  6786734 ctcattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 6786781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 217 - 264
Target Start/End: Complemental strand, 7468217 - 7468170
Alignment:
Q  217 ctcattttctctgtcccaaattataaacaaaaaagataaacttttatc 264  Q
    |||||||||| ||||||||| ||||| ||||||||| |||||||||||    
T  7468217 ctcattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 7468170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 217 - 264
Target Start/End: Complemental strand, 28017008 - 28016961
Alignment:
Q  217 ctcattttctctgtcccaaattataaacaaaaaagataaacttttatc 264  Q
    |||||||||| ||||||||| ||||| ||||||||| |||||||||||    
T  28017008 ctcattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 28016961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 216 - 263
Target Start/End: Complemental strand, 44149097 - 44149050
Alignment:
Q  216 tctcattttctctgtcccaaattataaacaaaaaagataaacttttat 263  Q
    ||||||||||| ||||||||| ||||| ||||||||| ||||||||||    
T  44149097 tctcattttctttgtcccaaaatataagcaaaaaagacaaacttttat 44149050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 264
Target Start/End: Complemental strand, 12449198 - 12449153
Alignment:
Q  219 cattttctctgtcccaaattataaacaaaaaagataaacttttatc 264  Q
    |||||||| ||||||||| ||||| ||||||||| |||||||||||    
T  12449198 cattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 12449153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 264
Target Start/End: Complemental strand, 32624237 - 32624192
Alignment:
Q  219 cattttctctgtcccaaattataaacaaaaaagataaacttttatc 264  Q
    |||||||| ||||||||| ||||| ||||||||| |||||||||||    
T  32624237 cattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 32624192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 264
Target Start/End: Complemental strand, 39555817 - 39555772
Alignment:
Q  219 cattttctctgtcccaaattataaacaaaaaagataaacttttatc 264  Q
    |||||||| ||||||||| ||||| ||||||||| |||||||||||    
T  39555817 cattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 39555772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 266
Target Start/End: Complemental strand, 45840293 - 45840244
Alignment:
Q  217 ctcattttctctgtcccaaattataaacaaaaaagataaacttttatcat 266  Q
    |||||||||| ||||||||||||||| |||||||| | || |||||||||    
T  45840293 ctcattttctttgtcccaaattataagcaaaaaagttcaaattttatcat 45840244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 266
Target Start/End: Complemental strand, 46804776 - 46804727
Alignment:
Q  217 ctcattttctctgtcccaaattataaacaaaaaagataaacttttatcat 266  Q
    |||||||||| |||||||||||||||||| ||||||  ||| ||||||||    
T  46804776 ctcattttctttgtcccaaattataaacagaaaagactaacgtttatcat 46804727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 266
Target Start/End: Original strand, 7397624 - 7397672
Alignment:
Q  218 tcattttctctgtcccaaattataaacaaaaaagataaacttttatcat 266  Q
    ||||||||| ||||||||||||||| ||||||||   ||||||||||||    
T  7397624 tcattttctttgtcccaaattataagcaaaaaagcctaacttttatcat 7397672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 264
Target Start/End: Complemental strand, 37735651 - 37735607
Alignment:
Q  220 attttctctgtcccaaattataaacaaaaaagataaacttttatc 264  Q
    ||||||||||||||||| | ||| |||||||||||||||| ||||    
T  37735651 attttctctgtcccaaactgtaagcaaaaaagataaacttgtatc 37735607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 220 - 266
Target Start/End: Original strand, 49080172 - 49080218
Alignment:
Q  220 attttctctgtcccaaattataaacaaaaaagataaacttttatcat 266  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||    
T  49080172 attttctctgtcccaaattataagcaaaaaagatcaacttttatcat 49080218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 217 - 264
Target Start/End: Complemental strand, 17187039 - 17186992
Alignment:
Q  217 ctcattttctctgtcccaaattataaacaaaaaagataaacttttatc 264  Q
    |||||||||| ||||||||| ||||| ||||||||| |||||||||||    
T  17187039 ctcattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 17186992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 2229175 - 2229220
Alignment:
Q  219 cattttctctgtcccaaattataaacaaaaaagataaacttttatc 264  Q
    |||||||| ||||||||| ||||| ||||||||| |||||||||||    
T  2229175 cattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 2229220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 266
Target Start/End: Complemental strand, 8013327 - 8013278
Alignment:
Q  217 ctcattttctctgtcccaaattataaacaaaaaagataaacttttatcat 266  Q
    |||||||||| |||||||||||||||  ||||||||  ||||||||||||    
T  8013327 ctcattttctttgtcccaaattataagtaaaaaagaccaacttttatcat 8013278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 14332687 - 14332732
Alignment:
Q  219 cattttctctgtcccaaattataaacaaaaaagataaacttttatc 264  Q
    |||||||| ||||||||| ||||| ||||||||| |||||||||||    
T  14332687 cattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 14332732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 26916253 - 26916298
Alignment:
Q  219 cattttctctgtcccaaattataaacaaaaaagataaacttttatc 264  Q
    |||||||| |||| |||| ||||| |||||||||||||||||||||    
T  26916253 cattttctttgtctcaaaatataagcaaaaaagataaacttttatc 26916298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 47867807 - 47867852
Alignment:
Q  219 cattttctctgtcccaaattataaacaaaaaagataaacttttatc 264  Q
    |||||||| ||||||||| ||||| ||||||||| |||||||||||    
T  47867807 cattttctttgtcccaaaatataagcaaaaaagaaaaacttttatc 47867852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 47516427 - 47516383
Alignment:
Q  219 cattttctctgtcccaaattataaacaaaaaagataaacttttat 263  Q
    |||||||| ||||||||||||||| |||||||||  |||||||||    
T  47516427 cattttctttgtcccaaattataagcaaaaaagaccaacttttat 47516383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000002; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 266
Target Start/End: Complemental strand, 5822266 - 5822217
Alignment:
Q  217 ctcattttctctgtcccaaattataaacaaaaaagataaacttttatcat 266  Q
    ||||||||||||||||||||||||||||||||||||  || |||||||||    
T  5822266 ctcattttctctgtcccaaattataaacaaaaaagactaatttttatcat 5822217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 266
Target Start/End: Complemental strand, 5881997 - 5881948
Alignment:
Q  217 ctcattttctctgtcccaaattataaacaaaaaagataaacttttatcat 266  Q
    ||||||||||||||||||||||||||||||||| ||  || |||||||||    
T  5881997 ctcattttctctgtcccaaattataaacaaaaatgactaatttttatcat 5881948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 266
Target Start/End: Original strand, 4987860 - 4987906
Alignment:
Q  220 attttctctgtcccaaattataaacaaaaaagataaacttttatcat 266  Q
    ||||||| |||||||||||||||| ||||||||  ||||||||||||    
T  4987860 attttctttgtcccaaattataaataaaaaagactaacttttatcat 4987906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 266
Target Start/End: Original strand, 1130433 - 1130482
Alignment:
Q  217 ctcattttctctgtcccaaattataaacaaaaaagataaacttttatcat 266  Q
    |||||||||| ||||||||||||||| ||||||| |  ||||||||||||    
T  1130433 ctcattttctttgtcccaaattataagcaaaaaaaaccaacttttatcat 1130482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 264
Target Start/End: Complemental strand, 3095952 - 3095907
Alignment:
Q  219 cattttctctgtcccaaattataaacaaaaaagataaacttttatc 264  Q
    |||||||| ||||||||| ||||| ||||||||| |||||||||||    
T  3095952 cattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 3095907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 21542348 - 21542393
Alignment:
Q  219 cattttctctgtcccaaattataaacaaaaaagataaacttttatc 264  Q
    |||||||| ||||||||| ||||| ||||||||| |||||||||||    
T  21542348 cattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 21542393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 266
Target Start/End: Complemental strand, 5300836 - 5300789
Alignment:
Q  218 tcattttctctgtcccaaattataaacaaaaaagataaacttttatcat 266  Q
    ||||||||| ||||||||||||||| | |||||||| ||||||||||||    
T  5300836 tcattttctttgtcccaaattataagc-aaaaagatcaacttttatcat 5300789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000002; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 6686313 - 6686358
Alignment:
Q  219 cattttctctgtcccaaattataaacaaaaaagataaacttttatc 264  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||    
T  6686313 cattttctttgtcccaaaatataaacaaaaaagataaacttttatc 6686358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 264
Target Start/End: Complemental strand, 842797 - 842752
Alignment:
Q  219 cattttctctgtcccaaattataaacaaaaaagataaacttttatc 264  Q
    |||||||| ||||||||| ||||| |||||||||||||||||||||    
T  842797 cattttctttgtcccaaaatataagcaaaaaagataaacttttatc 842752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 266
Target Start/End: Original strand, 32079421 - 32079470
Alignment:
Q  217 ctcattttctctgtcccaaattataaacaaaaaagataaacttttatcat 266  Q
    |||||||||| ||| ||||||||||| |||||||||||||||||| ||||    
T  32079421 ctcattttctttgttccaaattataagcaaaaaagataaacttttgtcat 32079470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 218 - 266
Target Start/End: Original strand, 8225361 - 8225409
Alignment:
Q  218 tcattttctctgtcccaaattataaacaaaaaagataaacttttatcat 266  Q
    ||||||||| ||||||||| ||||| ||||||||| |||||||||||||    
T  8225361 tcattttctttgtcccaaaatataagcaaaaaagacaaacttttatcat 8225409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 217 - 264
Target Start/End: Complemental strand, 9957680 - 9957633
Alignment:
Q  217 ctcattttctctgtcccaaattataaacaaaaaagataaacttttatc 264  Q
    |||||||||| ||||||||| ||||| ||||||||| |||||||||||    
T  9957680 ctcattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 9957633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 217 - 264
Target Start/End: Original strand, 42273546 - 42273593
Alignment:
Q  217 ctcattttctctgtcccaaattataaacaaaaaagataaacttttatc 264  Q
    |||||||||| ||||||||| ||||| ||||||||| |||||||||||    
T  42273546 ctcattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 42273593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 266
Target Start/End: Complemental strand, 16153590 - 16153541
Alignment:
Q  217 ctcattttctctgtcccaaattataaacaaaaaagataaacttttatcat 266  Q
    |||||||| | |||||||||| |||| ||||||||| |||||||||||||    
T  16153590 ctcattttgtttgtcccaaatgataagcaaaaaagacaaacttttatcat 16153541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000002; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 266
Target Start/End: Original strand, 38401294 - 38401343
Alignment:
Q  217 ctcattttctctgtcccaaattataaacaaaaaagataaacttttatcat 266  Q
    |||||||||| ||||||||||||||| |||||||||| ||||||||||||    
T  38401294 ctcattttctttgtcccaaattataagcaaaaaagatcaacttttatcat 38401343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 217 - 265
Target Start/End: Original strand, 21214155 - 21214203
Alignment:
Q  217 ctcattttctctgtcccaaattataaacaaaaaagataaacttttatca 265  Q
    |||||||||| ||||||||||||||| |||||||||| |||||||||||    
T  21214155 ctcattttctttgtcccaaattataagcaaaaaagatcaacttttatca 21214203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 218 - 266
Target Start/End: Complemental strand, 22479257 - 22479209
Alignment:
Q  218 tcattttctctgtcccaaattataaacaaaaaagataaacttttatcat 266  Q
    ||||||||| ||||||||||||||| ||||||||| |||||||||||||    
T  22479257 tcattttctttgtcccaaattataagcaaaaaagacaaacttttatcat 22479209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 264
Target Start/End: Complemental strand, 7866706 - 7866659
Alignment:
Q  217 ctcattttctctgtcccaaattataaacaaaaaagataaacttttatc 264  Q
    |||||||||| ||||||||| ||||||||||||||| |||||||||||    
T  7866706 ctcattttctttgtcccaaaatataaacaaaaaagacaaacttttatc 7866659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 266
Target Start/End: Original strand, 49583879 - 49583928
Alignment:
Q  217 ctcattttctctgtcccaaattataaacaaaaaagataaacttttatcat 266  Q
    |||||||| ||||||||||||||||| |||||||||  ||||||||||||    
T  49583879 ctcattttttctgtcccaaattataagcaaaaaagaccaacttttatcat 49583928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 218 - 266
Target Start/End: Complemental strand, 54725806 - 54725758
Alignment:
Q  218 tcattttctctgtcccaaattataaacaaaaaagataaacttttatcat 266  Q
    ||||||||| ||||||||||||||| ||||||||||  |||||||||||    
T  54725806 tcattttctttgtcccaaattataagcaaaaaagatctacttttatcat 54725758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 217 - 264
Target Start/End: Complemental strand, 14752431 - 14752384
Alignment:
Q  217 ctcattttctctgtcccaaattataaacaaaaaagataaacttttatc 264  Q
    |||||||||| ||||||||| ||||| ||||||||| |||||||||||    
T  14752431 ctcattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 14752384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 266
Target Start/End: Complemental strand, 47444177 - 47444131
Alignment:
Q  220 attttctctgtcccaaattataaacaaaaaagataaacttttatcat 266  Q
    ||||||| ||||||||||||||| ||||||| || ||||||||||||    
T  47444177 attttctttgtcccaaattataagcaaaaaatatcaacttttatcat 47444131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 264
Target Start/End: Complemental strand, 11054498 - 11054453
Alignment:
Q  219 cattttctctgtcccaaattataaacaaaaaagataaacttttatc 264  Q
    |||||||| ||||||||| ||||| ||||||||| |||||||||||    
T  11054498 cattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 11054453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 266
Target Start/End: Complemental strand, 22456212 - 22456163
Alignment:
Q  217 ctcattttctctgtcccaaattataaacaaaaaagataaacttttatcat 266  Q
    |||||||||| | ||||||||||||| |||||||||  ||||||||||||    
T  22456212 ctcattttctttatcccaaattataagcaaaaaagaccaacttttatcat 22456163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 266
Target Start/End: Original strand, 32070161 - 32070209
Alignment:
Q  217 ctcattttctctgtcccaaattataaacaaaaaagataaacttttatcat 266  Q
    |||||||||| | ||||||||||||| | |||||||||||||||||||||    
T  32070161 ctcattttctttctcccaaattataagc-aaaaagataaacttttatcat 32070209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 258
Target Start/End: Complemental strand, 20847494 - 20847454
Alignment:
Q  218 tcattttctctgtcccaaattataaacaaaaaagataaact 258  Q
    ||||||||| |||||||||||||||  ||||||||||||||    
T  20847494 tcattttctttgtcccaaattataagtaaaaaagataaact 20847454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 266
Target Start/End: Original strand, 38070912 - 38070961
Alignment:
Q  217 ctcattttctctgtcccaaattataaacaaaaaagataaacttttatcat 266  Q
    |||||||||| ||||||||||||||| ||||||||| |||||||||||||    
T  38070912 ctcattttctttgtcccaaattataagcaaaaaagacaaacttttatcat 38070961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 220 - 264
Target Start/End: Original strand, 45085188 - 45085232
Alignment:
Q  220 attttctctgtcccaaattataaacaaaaaagataaacttttatc 264  Q
    ||||||| ||||||||| ||||| |||||||||||||||||||||    
T  45085188 attttctttgtcccaaaatataagcaaaaaagataaacttttatc 45085232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 217 - 264
Target Start/End: Original strand, 19263996 - 19264043
Alignment:
Q  217 ctcattttctctgtcccaaattataaacaaaaaagataaacttttatc 264  Q
    |||||||||| ||||||||| ||||| ||||||||| |||||||||||    
T  19263996 ctcattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 19264043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 264
Target Start/End: Complemental strand, 6110431 - 6110386
Alignment:
Q  219 cattttctctgtcccaaattataaacaaaaaagataaacttttatc 264  Q
    |||||||| ||||||||| ||||| ||||||||| |||||||||||    
T  6110431 cattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 6110386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 264
Target Start/End: Complemental strand, 28599379 - 28599334
Alignment:
Q  219 cattttctctgtcccaaattataaacaaaaaagataaacttttatc 264  Q
    |||||||| ||||||||| ||||| ||||||||| |||||||||||    
T  28599379 cattttctttgtcccaaaatataatcaaaaaagacaaacttttatc 28599334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 266
Target Start/End: Original strand, 26998234 - 26998282
Alignment:
Q  218 tcattttctctgtcccaaattataaacaaaaaagataaacttttatcat 266  Q
    ||||||||| ||||| ||||||||| |||||||||  ||||||||||||    
T  26998234 tcattttctttgtcctaaattataagcaaaaaagaccaacttttatcat 26998282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 266
Target Start/End: Original strand, 32010019 - 32010067
Alignment:
Q  218 tcattttctctgtcccaaattataaacaaaaaagataaacttttatcat 266  Q
    ||||||||| ||| |||||||||||  ||||||||| ||||||||||||    
T  32010019 tcattttctttgttccaaattataagtaaaaaagatcaacttttatcat 32010067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000002; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 264
Target Start/End: Original strand, 13143659 - 13143706
Alignment:
Q  217 ctcattttctctgtcccaaattataaacaaaaaagataaacttttatc 264  Q
    |||||||||| ||||||||| ||||| |||||||||||||||||||||    
T  13143659 ctcattttctttgtcccaaaatataagcaaaaaagataaacttttatc 13143706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 266
Target Start/End: Original strand, 17314744 - 17314793
Alignment:
Q  217 ctcattttctctgtcccaaattataaacaaaaaagataaacttttatcat 266  Q
    |||||||||| ||| ||||||||||| |||||||||| ||||||||||||    
T  17314744 ctcattttctttgttccaaattataagcaaaaaagatcaacttttatcat 17314793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 219 - 266
Target Start/End: Original strand, 8673298 - 8673345
Alignment:
Q  219 cattttctctgtcccaaattataaacaaaaaagataaacttttatcat 266  Q
    |||||||| ||||||||||||||| |||||||||  ||||||||||||    
T  8673298 cattttctttgtcccaaattataagcaaaaaagaccaacttttatcat 8673345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 217 - 264
Target Start/End: Complemental strand, 34890439 - 34890392
Alignment:
Q  217 ctcattttctctgtcccaaattataaacaaaaaagataaacttttatc 264  Q
    |||||||||| ||||||||| ||||| ||||||||| |||||||||||    
T  34890439 ctcattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 34890392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 222 - 264
Target Start/End: Complemental strand, 33563770 - 33563728
Alignment:
Q  222 tttctctgtcccaaattataaacaaaaaagataaacttttatc 264  Q
    ||||| ||||||||||||||| |||||| ||||||||||||||    
T  33563770 tttctttgtcccaaattataagcaaaaatgataaacttttatc 33563728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 266
Target Start/End: Original strand, 38072114 - 38072160
Alignment:
Q  220 attttctctgtcccaaattataaacaaaaaagataaacttttatcat 266  Q
    ||||||| ||||||||||||||| |||||||||  ||||||||||||    
T  38072114 attttctttgtcccaaattataagcaaaaaagaccaacttttatcat 38072160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 266
Target Start/End: Original strand, 5217306 - 5217355
Alignment:
Q  217 ctcattttctctgtcccaaattataaacaaaaaagataaacttttatcat 266  Q
    |||||||||| ||| ||||||||||| |||||||||  ||||||||||||    
T  5217306 ctcattttctttgtaccaaattataagcaaaaaagaccaacttttatcat 5217355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 264
Target Start/End: Complemental strand, 7022635 - 7022590
Alignment:
Q  219 cattttctctgtcccaaattataaacaaaaaagataaacttttatc 264  Q
    |||||||| ||||||||| ||||| ||||||||| |||||||||||    
T  7022635 cattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 7022590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 7858456 - 7858501
Alignment:
Q  219 cattttctctgtcccaaattataaacaaaaaagataaacttttatc 264  Q
    |||||||| ||||||||| ||||| ||||||||| |||||||||||    
T  7858456 cattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 7858501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 266
Target Start/End: Original strand, 17713137 - 17713186
Alignment:
Q  217 ctcattttctctgtcccaaattataaacaaaaaagataaacttttatcat 266  Q
    |||||||||| |||||||||||||||  ||||||||  ||||||||||||    
T  17713137 ctcattttctttgtcccaaattataagtaaaaaagaccaacttttatcat 17713186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 266
Target Start/End: Original strand, 27819590 - 27819622
Alignment:
Q  234 aaattataaacaaaaaagataaacttttatcat 266  Q
    ||||||||| |||||||||||||||||||||||    
T  27819590 aaattataagcaaaaaagataaacttttatcat 27819622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 264
Target Start/End: Original strand, 910 - 956
Alignment:
Q  218 tcattttctctgtcccaaattataaacaaaaaagataaacttttatc 264  Q
    ||||||||| ||||||||| ||||| ||||||||| |||||||||||    
T  910 tcattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 264
Target Start/End: Original strand, 8870 - 8916
Alignment:
Q  218 tcattttctctgtcccaaattataaacaaaaaagataaacttttatc 264  Q
    ||||||||| ||||||||| ||||| ||||||||| |||||||||||    
T  8870 tcattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 8916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 31; Significance: 0.00000002; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 266
Target Start/End: Original strand, 3775772 - 3775818
Alignment:
Q  220 attttctctgtcccaaattataaacaaaaaagataaacttttatcat 266  Q
    ||||||| | ||| |||||||||||||||||||| ||||||||||||    
T  3775772 attttctttatcctaaattataaacaaaaaagatcaacttttatcat 3775818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 266
Target Start/End: Complemental strand, 24151820 - 24151774
Alignment:
Q  220 attttctctgtcccaaattataaacaaaaaagataaacttttatcat 266  Q
    ||||||| ||||||||||||||| |||||||||  ||||||||||||    
T  24151820 attttctttgtcccaaattataagcaaaaaagaccaacttttatcat 24151774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 264
Target Start/End: Original strand, 25944474 - 25944520
Alignment:
Q  218 tcattttctctgtcccaaattataaacaaaaaagataaacttttatc 264  Q
    ||||||||| ||||||||| ||||| ||||||||| |||||||||||    
T  25944474 tcattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 25944520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 18102459 - 18102504
Alignment:
Q  219 cattttctctgtcccaaattataaacaaaaaagataaacttttatc 264  Q
    |||||||| ||||||||| ||||| ||||||||| |||||||||||    
T  18102459 cattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 18102504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 35923182 - 35923227
Alignment:
Q  219 cattttctctgtcccaaattataaacaaaaaagataaacttttatc 264  Q
    |||||||| ||||||||| |||||  ||||||||||||||||||||    
T  35923182 cattttctttgtcccaaaatataataaaaaaagataaacttttatc 35923227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0774 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0774
Description:

Target: scaffold0774; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 223 - 264
Target Start/End: Complemental strand, 3655 - 3614
Alignment:
Q  223 ttctctgtcccaaattataaacaaaaaagataaacttttatc 264  Q
    |||| ||||||||| ||||| |||||||||||||||||||||    
T  3655 ttctttgtcccaaaatataagcaaaaaagataaacttttatc 3614  T

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Target: scaffold0045 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 77887 - 77932
Alignment:
Q  219 cattttctctgtcccaaattataaacaaaaaagataaacttttatc 264  Q
    |||||||| ||||||||| ||||| ||||||||| |||||||||||    
T  77887 cattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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