View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10132_low_3 (Length: 524)
Name: NF10132_low_3
Description: NF10132
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10132_low_3 |
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Alignment Details
Target: chr8 (Bit Score: 484; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 484; E-Value: 0
Query Start/End: Original strand, 17 - 512
Target Start/End: Original strand, 34442119 - 34442614
Alignment:
| Q |
17 |
attttcctacctagtggacttgtctctgacacataaatcaataaaccaattgaattctaccatgattcctttgtttgctaactctatagagtgaagatat |
116 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34442119 |
attttcctacctagtggacttgtctctgacacataaatcaataaaccaattcaattctaccatgattcctttgtttgctaactctatagagtgaagatat |
34442218 |
T |
|
| Q |
117 |
gaaatgtggattccaattccaacccacatggcacctgcattacttgcttagtaataataatattaataataaaaaagctcatcaatttccaaggtaaatt |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34442219 |
gaaatgtggattccaattccaacccacatggcacctgcattacttgcttagtaataataatattaataataaaaaagctcatcaatttccaaggtaaatt |
34442318 |
T |
|
| Q |
217 |
gttattctatgtttcttcttttttatctatctattcttgtcctaaatggcccccctccttttttgtgaaaccatgcacagtatattttgttaattattag |
316 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34442319 |
gttattctatgtttcttcttttttatctatctattcttgtcctaaatggcccccctccttttttgtgaaaccatgcacagtatattttgttaattattag |
34442418 |
T |
|
| Q |
317 |
tagtatattttaatattgaatggatctcaaattcactcatttctctgcaactctcagaatttcatggttttcaagtattaataagaaggtacatcatatc |
416 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34442419 |
tagtatattttaatattgaatggatctcaaattcactcatttctctgcaactctcagaatttcatggttttcaagtattaataagaaggtacatcatatc |
34442518 |
T |
|
| Q |
417 |
attcattctcttaaatagtaagcattgagcaatatatactctgaacttagtgtttaattctgtgttcctctaatatatgtctttcctcctcctttg |
512 |
Q |
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||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
34442519 |
attcattctcttaaacagtaagcattgagcaatatatactctgaacttagtgtttaattctgtgttcctctaatatatgtctttcttcctcctttg |
34442614 |
T |
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