View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10132_low_35 (Length: 248)
Name: NF10132_low_35
Description: NF10132
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10132_low_35 |
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Alignment Details
Target: chr1 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 34472586 - 34472819
Alignment:
| Q |
1 |
tgttgttttctttttctatatttacttttaattatataacagtcatgnnnnnnnactcaatttccttttcatgtttttaaaggagacaatgtgaaagcaa |
100 |
Q |
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| T |
34472586 |
tgttgttttctttttctatatttacttttaattatataacagtcatgtttttttactcaatttccttttcatgtttttaaaggagacaatgtgaaagcaa |
34472685 |
T |
|
| Q |
101 |
ttcaaagttcaaaccacatttagatgatttgatgagagtctgaaactgagagacagagtgaagagaatgaataagcaaacttatttcttacagaatataa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
34472686 |
ttcaaagttcaaaccacatttagatgatttgatgagagtctgaaactgagagacagagtgaagagaatgaataaccaaacttatttcttacagaatataa |
34472785 |
T |
|
| Q |
201 |
gtgatttcttatatacatatatcaaggtgttttt |
234 |
Q |
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|||||||||||||||||||||||| ||||||||| |
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| T |
34472786 |
gtgatttcttatatacatatatcagggtgttttt |
34472819 |
T |
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