View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10132_low_5 (Length: 506)
Name: NF10132_low_5
Description: NF10132
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10132_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 458; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 458; E-Value: 0
Query Start/End: Original strand, 19 - 500
Target Start/End: Complemental strand, 26029617 - 26029137
Alignment:
| Q |
19 |
tctatatccagcctagagacaaaattcaaaattttcattttacaaaaaactattaatattcatcatgaataatataatgattctcaaaaactgatctcaa |
118 |
Q |
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||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26029617 |
tctatatccagcctaaagacaaaattcaaaattttcattttacaaaaa-ctattaatattcatcatgaataatataatgattctcaaaaactgatctcaa |
26029519 |
T |
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| Q |
119 |
tctcaatatgttacataagttacctcagtaatggctgtgaagacagaattgatagcttgtgaaccagatttccatgtgcctaatccaatagcaggaatgc |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26029518 |
tctcaatatgttacataagttacctcagtaatggctgtgaagacagaattgatagcttgtgaaccagatttccatgtgcctaatccaatagcaggaatgc |
26029419 |
T |
|
| Q |
219 |
tatgtccactcaaaagatcaaatgactttgtctttggttcatgtggcttaactgtttgtgccatttttaataaattcaatgctttctaagataatgttaa |
318 |
Q |
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||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26029418 |
tatgtccactcaacagatcaaatgactttgtctttggttcatgtggcttaactgtttgtgccatttttaataaattcaatgctttctaagataatgttaa |
26029319 |
T |
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| Q |
319 |
tttgtttcttgtgaatcatatgatataattataaccaaagagtctttgtggaataagcggacatgtaggagttcattgagtaacaaaacatgatacctat |
418 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
26029318 |
tttgtttcttgtgaatcatatgatataattataaccaaagagtctttgtggaataagcggacatgtaggagttcattgagtaagaaaacatgatacctat |
26029219 |
T |
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| Q |
419 |
ttgcatgctagatagtagacacgttcctttctattttagtctacgtgttctctttctaactcctttcttctcttcatctcac |
500 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
26029218 |
ttgcatgctagatagtagacacgttcctttctattttagtctacgtgttctcttcctaactcctttcttctcttcatctcac |
26029137 |
T |
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