View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10132_low_7 (Length: 445)
Name: NF10132_low_7
Description: NF10132
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10132_low_7 |
 | |
|
Alignment Details
Target: chr2 (Bit Score: 418; Significance: 0; HSPs: 25)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 418; E-Value: 0
Query Start/End: Original strand, 3 - 428
Target Start/End: Original strand, 30250596 - 30251021
Alignment:
| Q |
3 |
tttagacactatcacacattgacggatgcaagaatcagtttctacaaattaataaacgacctgaaggcctcttcgttgttacttgagtcagaaattgatc |
102 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
30250596 |
tttagacactatcacacattgacggatgcaagaatcagattctacaaattaataaacgacctgaaggcctcttcgttgttacttgagtccgaaattgatc |
30250695 |
T |
|
| Q |
103 |
gggttagacttcacgatgttgtaagagatgtggctaaatcaatttcatccaggactcggccaacctatggggtgaaaagatacaccgaagtaaaacaatg |
202 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30250696 |
gggttagacttcacgatgttgtaagagatgtggctaaatcaatttcatccaggactcggccaacctatggggtgaaaagatacaccgaagtaaaacaatg |
30250795 |
T |
|
| Q |
203 |
gccagagatggatcaactaagaaaatgccatcagataatcattccttggtcatatatttacaagcttcctgaaaagctggagtgcccagagctaaagcta |
302 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30250796 |
gccagagatggatcaactaagaaaatgccatcagataatcattccttggtcatatatttacaagcttcctgaaaagctggagtgcccagagctaaagcta |
30250895 |
T |
|
| Q |
303 |
ctactacttcataatatagatgactttttgaaagtccctgatgacttcttctccgggatgagagagctaaaggtcattaatttatatggaatgatactta |
402 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30250896 |
ctactacttcataatatagatgactttttgaaagtccctgatgacttcttctccgggatgagagagctaaaggtcattaatttatatggaatgatactta |
30250995 |
T |
|
| Q |
403 |
ccccttctccaccaccatctctttat |
428 |
Q |
| |
|
|||||||||||||||||||||||||| |
|
|
| T |
30250996 |
ccccttctccaccaccatctctttat |
30251021 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 178; E-Value: 7e-96
Query Start/End: Original strand, 27 - 416
Target Start/End: Complemental strand, 30120501 - 30120112
Alignment:
| Q |
27 |
gatgcaagaatcagtttctacaaattaataaacgacctgaaggcctcttcgttgttacttgagtcagaaattgatcgggttagacttcacgatgttgtaa |
126 |
Q |
| |
|
|||||||||||||| ||| ||| ||||||||| ||||| ||||| ||||| |||||||||||||| ||| |||||||||||||| |||| ||| ||||| |
|
|
| T |
30120501 |
gatgcaagaatcagattcaacagattaataaatgaccttaaggcatcttcattgttacttgagtctgaatttgatcgggttagaattcatgattatgtaa |
30120402 |
T |
|
| Q |
127 |
gagatgtggctaaatcaatttcatccaggactcggccaacctatggggtgaaaagatacaccgaagtaaaacaatggccagagatggatcaactaagaaa |
226 |
Q |
| |
|
||||| |||||||||||||| ||| |||||||| |||||||||||||||||||| ||||| ||||||| |||||||| | ||||||| | || ||| |
|
|
| T |
30120401 |
gagatatggctaaatcaattgcatgtaggactcgaccaacctatggggtgaaaaggtacactaaagtaaatcaatggcctgggatggatgagcttcaaaa |
30120302 |
T |
|
| Q |
227 |
atgccatcagataatcattccttggtcatatatttacaagcttcctgaaaagctggagtgcccagagctaaagctactactacttcataatatagatgac |
326 |
Q |
| |
|
|||||||||||| ||| |||||||||| |||||||||||||||||||| ||| || ||||||||||| | |||||||| | ||||| ||||||| || |
|
|
| T |
30120301 |
atgccatcagatcatccttccttggtcttatatttacaagcttcctgagaagttgaagtgcccagagttgaagctactgcagcttcagaatataggagat |
30120202 |
T |
|
| Q |
327 |
tttttgaaagtccctgatgacttcttctccgggatgagagagctaaaggtcattaatttatatggaatgatacttaccccttctccacca |
416 |
Q |
| |
|
| |||||||||||| |||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||| || |||| ||||||||| |
|
|
| T |
30120201 |
tatttgaaagtccccgatgacttcttctctgggatgatagagctaaaggtcattagtttatatggaatgatgtttgccccgtctccacca |
30120112 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 27 - 416
Target Start/End: Complemental strand, 30135199 - 30134810
Alignment:
| Q |
27 |
gatgcaagaatcagtttctacaaattaataaacgacctgaaggcctcttcgttgttacttgagtcagaaattgatcgggttagacttcacgatgttgtaa |
126 |
Q |
| |
|
|||||||||||||| ||| ||| ||||||||| ||||| ||||| ||||| |||||||||||||| ||| |||||||||||||| |||| ||| ||||| |
|
|
| T |
30135199 |
gatgcaagaatcagattcaacagattaataaatgaccttaaggcatcttcattgttacttgagtctgaatttgatcgggttagaattcatgattatgtaa |
30135100 |
T |
|
| Q |
127 |
gagatgtggctaaatcaatttcatccaggactcggccaacctatggggtgaaaagatacaccgaagtaaaacaatggccagagatggatcaactaagaaa |
226 |
Q |
| |
|
||||| |||||||||||||| ||| |||||||| |||||||||||||||||||| ||||| ||||||| |||||||| | ||||||| | || ||| |
|
|
| T |
30135099 |
gagatatggctaaatcaattgcatgtaggactcgaccaacctatggggtgaaaaggtacactaaagtaaatcaatggcctgggatggatgagcttcaaaa |
30135000 |
T |
|
| Q |
227 |
atgccatcagataatcattccttggtcatatatttacaagcttcctgaaaagctggagtgcccagagctaaagctactactacttcataatatagatgac |
326 |
Q |
| |
|
|||||||||||| ||| |||||||||| | |||||||||||||||||| ||| || ||||||||||| | |||||||| | ||||| ||||||| || |
|
|
| T |
30134999 |
atgccatcagatcatccttccttggtcttttatttacaagcttcctgagaagttgaagtgcccagagttgaagctactgcagcttcagaatataggagat |
30134900 |
T |
|
| Q |
327 |
tttttgaaagtccctgatgacttcttctccgggatgagagagctaaaggtcattaatttatatggaatgatacttaccccttctccacca |
416 |
Q |
| |
|
| |||||||||||| |||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||| || |||| ||||||||| |
|
|
| T |
30134899 |
tatttgaaagtccccgatgacttcttctctgggatgatagagctaaaggtcattagtttatatggaatgatgtttgccccgtctccacca |
30134810 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 3 - 424
Target Start/End: Original strand, 30056136 - 30056557
Alignment:
| Q |
3 |
tttagacactatcacacattgacggatgcaagaatcagtttctacaaattaataaacgacctgaaggcctcttcgttgttacttgagtcagaaattgatc |
102 |
Q |
| |
|
|||||||| | ||||| |||| | |||||||||||||| ||| ||| ||||||||| ||||| ||||| ||||| |||||||||||||| ||| |||||| |
|
|
| T |
30056136 |
tttagacattctcacaaattggcagatgcaagaatcagattcaacagattaataaatgaccttaaggcatcttcattgttacttgagtctgaatttgatc |
30056235 |
T |
|
| Q |
103 |
gggttagacttcacgatgttgtaagagatgtggctaaatcaatttcatccaggactcggccaacctatggggtgaaaagatacaccgaagtaaaacaatg |
202 |
Q |
| |
|
|||||||| |||| ||| |||||||||| |||||||||||||| ||| |||||| | |||||||||||||||||||| ||||| ||||||| ||||| |
|
|
| T |
30056236 |
gggttagaattcatgattatgtaagagatatggctaaatcaattacatgtaggactagaccaacctatggggtgaaaaggtacactaaagtaaatcaatg |
30056335 |
T |
|
| Q |
203 |
gccagagatggatcaactaagaaaatgccatcagataatcattccttggtcatatatttacaagcttcctgaaaagctggagtgcccagagctaaagcta |
302 |
Q |
| |
|
||| | ||||||| | || |||||||||||||||| ||| || ||||||| |||||||||||||||||||| ||||||| ||| ||| || | ||||| |
|
|
| T |
30056336 |
gcctgggatggatgagcttcgaaaatgccatcagatcatccttacttggtcttatatttacaagcttcctgagaagctggtgtgtccaaagttggagcta |
30056435 |
T |
|
| Q |
303 |
ctactacttcataatatagatgactttttgaaagtccctgatgacttcttctccgggatgagagagctaaaggtcattaatttatatggaatgatactta |
402 |
Q |
| |
|
|| | |||| | ||||||| ||| |||| ||||||| |||||||||||||| ||||||| ||||||||||||| ||| ||||||||||||||| || |
|
|
| T |
30056436 |
cttcaacttgaaaatataggtgataatttggaagtccccgatgacttcttctctgggatgatagagctaaaggtcgttagtttatatggaatgatgtttg |
30056535 |
T |
|
| Q |
403 |
ccccttctccaccaccatctct |
424 |
Q |
| |
|
||||||||| |||| ||||||| |
|
|
| T |
30056536 |
ccccttctctaccatcatctct |
30056557 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 17 - 426
Target Start/End: Original strand, 30788954 - 30789363
Alignment:
| Q |
17 |
cacattgacggatgcaagaatcagtttctacaaattaataaacgacctgaaggcctcttcgttgttacttgagtcagaaattgatcgggttagacttcac |
116 |
Q |
| |
|
||||||||| ||||| |||| ||| | |||||||||| ||||||| || || || ||||| ||||| ||||||| ||| | || ||||||||| |||| |
|
|
| T |
30788954 |
cacattgacagatgcgagaaccagatactacaaattattaaacgatctcaaagcatcttcactgttaattgagtctgaattggaacgggttagaattcat |
30789053 |
T |
|
| Q |
117 |
gatgttgtaagagatgtggctaaatcaatttcatccaggactcggccaacctatggggtgaaaagatacaccgaagtaaaacaatggccagagatggatc |
216 |
Q |
| |
|
|||||||| | |||||||||||||||||| |||| |||||| | |||||||||||||||||||| | ||| ||||||||||||||| ||| |||| |
|
|
| T |
30789054 |
gatgttgttaaagatgtggctaaatcaatcgcatctaggacttgcccaacctatggggtgaaaaggttcactttgataaaacaatggccagtgatagatc |
30789153 |
T |
|
| Q |
217 |
aactaagaaaatgccatcagataatcattccttggtcatatatttacaagcttcctgaaaagctggagtgcccagagctaaagctactactacttcataa |
316 |
Q |
| |
|
|| | |||||| ||||| || || | |||||||| |||||||||| |||||||| |||||||||||||||||||| ||| |||| |||||||| || |
|
|
| T |
30789154 |
aaattcaaaaatgtcatcaaatcattctaccttggtctaatatttacaatcttcctgagaagctggagtgcccagagctgaagttacttctacttcaaaa |
30789253 |
T |
|
| Q |
317 |
tatagatgactttttgaaagtccctgatgacttcttctccgggatgagagagctaaaggtcattaatttatatggaatgatacttaccccttctccacca |
416 |
Q |
| |
|
||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||| |
|
|
| T |
30789254 |
tataggtgattatttgaaagtccctgatgacttcttctccgggatgagagagctaaaggttgttaatttatatggaatgatgcttaccccttttccacca |
30789353 |
T |
|
| Q |
417 |
ccatctcttt |
426 |
Q |
| |
|
|||||||| |
|
|
| T |
30789354 |
aaatctcttt |
30789363 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 3 - 302
Target Start/End: Complemental strand, 30039029 - 30038730
Alignment:
| Q |
3 |
tttagacactatcacacattgacggatgcaagaatcagtttctacaaattaataaacgacctgaaggcctcttcgttgttacttgagtcagaaattgatc |
102 |
Q |
| |
|
|||||||| | ||||| |||| | |||||||||||||| ||| ||| ||||||||| ||||| ||||| ||||| |||||||||||||| ||| |||||| |
|
|
| T |
30039029 |
tttagacattctcacaaattggcagatgcaagaatcagattcaacagattaataaatgaccttaaggcatcttcattgttacttgagtctgaatttgatc |
30038930 |
T |
|
| Q |
103 |
gggttagacttcacgatgttgtaagagatgtggctaaatcaatttcatccaggactcggccaacctatggggtgaaaagatacaccgaagtaaaacaatg |
202 |
Q |
| |
|
|||||||| |||| ||| |||||||||| |||||||||||||| ||| |||||||| |||||||||||||||||||| ||||| ||||||| ||||| |
|
|
| T |
30038929 |
gggttagaattcatgattatgtaagagatatggctaaatcaattgcatgtaggactcgaccaacctatggggtgaaaaggtacactaaagtaaatcaatg |
30038830 |
T |
|
| Q |
203 |
gccagagatggatcaactaagaaaatgccatcagataatcattccttggtcatatatttacaagcttcctgaaaagctggagtgcccagagctaaagcta |
302 |
Q |
| |
|
||| | ||||||| | || |||||||||||||||| ||| |||||||||| |||||||||||||||||||| ||| || ||||||||||| | |||||| |
|
|
| T |
30038829 |
gcctgggatggatgagcttcgaaaatgccatcagatcatccttccttggtcttatatttacaagcttcctgagaagttgaagtgcccagagttgaagcta |
30038730 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 3 - 302
Target Start/End: Complemental strand, 30108507 - 30108208
Alignment:
| Q |
3 |
tttagacactatcacacattgacggatgcaagaatcagtttctacaaattaataaacgacctgaaggcctcttcgttgttacttgagtcagaaattgatc |
102 |
Q |
| |
|
|||||||| | ||||| |||| | |||||||||||||| ||| ||| ||||||||| ||||| ||||| ||||| |||||||||||||| ||| |||||| |
|
|
| T |
30108507 |
tttagacattctcacaaattggcagatgcaagaatcagattcaacagattaataaatgaccttaaggcatcttcattgttacttgagtctgaatttgatc |
30108408 |
T |
|
| Q |
103 |
gggttagacttcacgatgttgtaagagatgtggctaaatcaatttcatccaggactcggccaacctatggggtgaaaagatacaccgaagtaaaacaatg |
202 |
Q |
| |
|
|||||||| |||| ||| |||||||||| |||||||||||||| ||| |||||||| |||||||||||||||||||| ||||| ||||||| ||||| |
|
|
| T |
30108407 |
gggttagaattcatgattatgtaagagatatggctaaatcaattgcatgtaggactcgaccaacctatggggtgaaaaggtacactaaagtaaatcaatg |
30108308 |
T |
|
| Q |
203 |
gccagagatggatcaactaagaaaatgccatcagataatcattccttggtcatatatttacaagcttcctgaaaagctggagtgcccagagctaaagcta |
302 |
Q |
| |
|
||| | ||||||| | || |||||||||||||||| ||| |||||||||| |||||||||||||||||||| ||| || ||||||||||| | |||||| |
|
|
| T |
30108307 |
gcctgggatggatgagcttcgaaaatgccatcagatcatccttccttggtcttatatttacaagcttcctgagaagttgaagtgcccagagttgaagcta |
30108208 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 3 - 302
Target Start/End: Complemental strand, 30233167 - 30232868
Alignment:
| Q |
3 |
tttagacactatcacacattgacggatgcaagaatcagtttctacaaattaataaacgacctgaaggcctcttcgttgttacttgagtcagaaattgatc |
102 |
Q |
| |
|
|||||||| | ||||| |||| | |||||||||||||| ||| ||| ||||||||| ||||| ||||| ||||| |||||||||||||| ||| |||||| |
|
|
| T |
30233167 |
tttagacattctcacaaattggcagatgcaagaatcagattcaacagattaataaatgaccttaaggcatcttcattgttacttgagtctgaatttgatc |
30233068 |
T |
|
| Q |
103 |
gggttagacttcacgatgttgtaagagatgtggctaaatcaatttcatccaggactcggccaacctatggggtgaaaagatacaccgaagtaaaacaatg |
202 |
Q |
| |
|
|||||||| |||| ||| |||||||||| |||||||||||||| ||| |||||||| |||||||||||||||||||| ||||| ||||||| ||||| |
|
|
| T |
30233067 |
gggttagaattcatgattatgtaagagatatggctaaatcaattgcatgtaggactcgaccaacctatggggtgaaaaggtacactaaagtaaatcaatg |
30232968 |
T |
|
| Q |
203 |
gccagagatggatcaactaagaaaatgccatcagataatcattccttggtcatatatttacaagcttcctgaaaagctggagtgcccagagctaaagcta |
302 |
Q |
| |
|
||| | ||||||| | || |||||||||||||||| ||| |||||||||| |||||||||||||||||||| ||| || ||||||||||| | |||||| |
|
|
| T |
30232967 |
gcctgggatggatgagcttcgaaaatgccatcagatcatccttccttggtcttatatttacaagcttcctgagaagttgaagtgcccagagttgaagcta |
30232868 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 14 - 302
Target Start/End: Original strand, 30080083 - 30080371
Alignment:
| Q |
14 |
tcacacattgacggatgcaagaatcagtttctacaaattaataaacgacctgaaggcctcttcgttgttacttgagtcagaaattgatcgggttagactt |
113 |
Q |
| |
|
||||| |||| | |||||||||||||| ||| ||| ||||||||| ||||| ||||| ||||| |||||||||||||| ||| |||||||||||||| || |
|
|
| T |
30080083 |
tcacaaattggcagatgcaagaatcagattcaacagattaataaatgaccttaaggcatcttcattgttacttgagtctgaatttgatcgggttagaatt |
30080182 |
T |
|
| Q |
114 |
cacgatgttgtaagagatgtggctaaatcaatttcatccaggactcggccaacctatggggtgaaaagatacaccgaagtaaaacaatggccagagatgg |
213 |
Q |
| |
|
|| ||| |||||||||| |||||||||||||| ||| |||||||| |||||||||||||||||||| ||||| ||||||| |||||||| | ||||| |
|
|
| T |
30080183 |
catgattatgtaagagatatggctaaatcaattgcatgtaggactcgaccaacctatggggtgaaaaggtacactaaagtaaatcaatggcctgggatgg |
30080282 |
T |
|
| Q |
214 |
atcaactaagaaaatgccatcagataatcattccttggtcatatatttacaagcttcctgaaaagctggagtgcccagagctaaagcta |
302 |
Q |
| |
|
|| | || |||||||||||||||| ||| |||||||||| |||||||||||||||||||| ||| || ||||||||||| | |||||| |
|
|
| T |
30080283 |
atgagcttcgaaaatgccatcagatcatccttccttggtcttatatttacaagcttcctgagaagttgaagtgcccagagttgaagcta |
30080371 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 27 - 302
Target Start/End: Original strand, 30021690 - 30021965
Alignment:
| Q |
27 |
gatgcaagaatcagtttctacaaattaataaacgacctgaaggcctcttcgttgttacttgagtcagaaattgatcgggttagacttcacgatgttgtaa |
126 |
Q |
| |
|
|||||||||||||| ||| ||| ||||||||| ||||| ||||| ||||| |||||||||||||| ||| |||||||||||||| |||| ||| ||||| |
|
|
| T |
30021690 |
gatgcaagaatcagattcaacagattaataaatgaccttaaggcatcttcattgttacttgagtctgaatttgatcgggttagaattcatgattatgtaa |
30021789 |
T |
|
| Q |
127 |
gagatgtggctaaatcaatttcatccaggactcggccaacctatggggtgaaaagatacaccgaagtaaaacaatggccagagatggatcaactaagaaa |
226 |
Q |
| |
|
||||| |||||||||||||| ||| |||||||| |||||||||||||||||||| ||||| ||||||| |||||||| | ||||||| | || |||| |
|
|
| T |
30021790 |
gagatatggctaaatcaattgcatgtaggactcgaccaacctatggggtgaaaaggtacactaaagtaaatcaatggcctgggatggatgagcttcgaaa |
30021889 |
T |
|
| Q |
227 |
atgccatcagataatcattccttggtcatatatttacaagcttcctgaaaagctggagtgcccagagctaaagcta |
302 |
Q |
| |
|
|||||||||||| ||| |||||||||| |||||||||||||||||||| ||| || ||||||||||| | |||||| |
|
|
| T |
30021890 |
atgccatcagatcatccttccttggtcttatatttacaagcttcctgagaagttgaagtgcccagagttgaagcta |
30021965 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 5 - 425
Target Start/End: Original strand, 30066884 - 30067304
Alignment:
| Q |
5 |
tagacactatcacacattgacggatgcaagaatcagtttctacaaattaataaacgacctgaaggcctcttcgttgttacttgagtcagaaattgatcgg |
104 |
Q |
| |
|
|||||||| |||||||||||| |||||||||| ||| | || |||||||||||| ||||| ||||| | || ||||||||||||| ||| ||| | |
|
|
| T |
30066884 |
tagacactctcacacattgacagatgcaagaaccagatactgcaaattaataaatgacctaaaggcttgctcactgttacttgagtctgaagctgaacta |
30066983 |
T |
|
| Q |
105 |
gttagacttcacgatgttgtaagagatgtggctaaatcaatttcatccaggactcggccaacctatggggtgaaaagatacaccgaagtaaaacaatggc |
204 |
Q |
| |
|
||||| |||| |||||||| ||||||||||| |||||||| |||| |||||||| ||||||||||| ||| |||| | | | ||||||| |||| |
|
|
| T |
30066984 |
attagaattcatgatgttgttagagatgtggccaaatcaatcgcatctaggactcgaccaacctatggtgtgcaaaggttcgctttgataaaacagtggc |
30067083 |
T |
|
| Q |
205 |
cagagatggatcaactaagaaaatgccatcagataatcattccttggtcatatatttacaagcttcctgaaaagctggagtgcccagagctaaagctact |
304 |
Q |
| |
|
||||||| ||||| || ||||||||||||||| | | | |||||| ||||||||||| |||||||| ||| |||||||||||||| | | ||||| |
|
|
| T |
30067084 |
cagagatagatcagctccaaaaatgccatcagatcagtctgcattggtcttatatttacaatcttcctgagaagatggagtgcccagagttgactctact |
30067183 |
T |
|
| Q |
305 |
actacttcataatatagatgactttttgaaagtccctgatgacttcttctccgggatgagagagctaaaggtcattaatttatatggaatgatacttacc |
404 |
Q |
| |
|
||||| | ||||||| ||| | ||| ||| || | |||||||||||||| ||||||||||||||| |||| ||| ||||||||||||||| || | |
|
|
| T |
30067184 |
tatacttgaaaatataggtgagtatttaaaaatctccgatgacttcttctctgggatgagagagctatcggtcgttagtttatatggaatgatgtttgct |
30067283 |
T |
|
| Q |
405 |
ccttctccaccaccatctctt |
425 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
30067284 |
ccttctccaccaccatctctt |
30067304 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 44 - 425
Target Start/End: Complemental strand, 30186043 - 30185659
Alignment:
| Q |
44 |
ctacaaattaataaacgacctgaaggcctcttcgttgttacttgagtcagaaattgatcgggttagacttcacgatgttgtaagagatgtggctaaatca |
143 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||| || |||||||||| |||| || || ||||| |||| |||||||| ||| ||||||||||||| |
|
|
| T |
30186043 |
ctacaaattaataaatgacctaaaggcctcttcactgctacttgagtctgaaaccgagtggattagaattcatgatgttgttagatctgtggctaaatca |
30185944 |
T |
|
| Q |
144 |
atttcatccaggactcggcca---acctatggggtgaaaagatacaccgaagtaaaacaatggccagagatggatcaactaagaaaatgccatcagataa |
240 |
Q |
| |
|
|| |||| | ||||| ||| || | |||| ||||||| |||| ||||||||||||||||||| ||||||| | || |||||||||||||||| | |
|
|
| T |
30185943 |
atcgcatctaagactcaaccaccaacttttgggatgaaaaggtacaatgaagtaaaacaatggccagggatggatgagcttcgaaaatgccatcagatca |
30185844 |
T |
|
| Q |
241 |
tcattccttggtcatatatttacaagcttcctgaaaagctggagtgcccagagctaaagctactactacttcataatatagatgactttttgaaagtccc |
340 |
Q |
| |
|
|| | |||||||| |||||||||||||||||||| ||||||| ||| ||| || | ||||||| | |||| | ||||||| ||| | |||| ||||||| |
|
|
| T |
30185843 |
tcttgccttggtcttatatttacaagcttcctgagaagctggtgtgtccaaagttggagctacttcaacttgaaaatataggtgattatttggaagtccc |
30185744 |
T |
|
| Q |
341 |
tgatgacttcttctccgggatgagagagctaaaggtcattaatttatatggaatgatacttaccccttctccaccaccatctctt |
425 |
Q |
| |
|
| ||||| ||||| |||||||||||| |||| ||| ||| ||||| ||||||||| |||||||||||| |||| |||||||| |
|
|
| T |
30185743 |
caacgacttattctctgggatgagagagttaaaagtcgttagtttatttggaatgatgtttaccccttctctaccatcatctctt |
30185659 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 174 - 424
Target Start/End: Original strand, 30222582 - 30222832
Alignment:
| Q |
174 |
gtgaaaagatacaccgaagtaaaacaatggccagagatggatcaactaagaaaatgccatcagataatcattccttggtcatatatttacaagcttcctg |
273 |
Q |
| |
|
|||||||| ||| ||||||| |||||||||||| |||| ||||| || ||| | |||||| || || | |||||||| |||||| | ||||||||| |
|
|
| T |
30222582 |
gtgaaaaggtactccgaagtcaaacaatggccaaagatagatcagcttcaaaagttccatcaaatcattttgccttggtcttatattaatgagcttcctg |
30222681 |
T |
|
| Q |
274 |
aaaagctggagtgcccagagctaaagctactactacttcataatatagatgactttttgaaagtccctgatgacttcttctccgggatgagagagctaaa |
373 |
Q |
| |
|
| ||| |||||||||||||| | | |||||| |||||||||||||||| ||| |||||||||| ||||||| || ||||| ||||||||||| |||| |
|
|
| T |
30222682 |
agaagttggagtgcccagagttgaggctacttctacttcataatataggcgacaatttgaaagtctctgatgagtttttctctgggatgagagaagtaaa |
30222781 |
T |
|
| Q |
374 |
ggtcattaatttatatggaatgatacttaccccttctccaccaccatctct |
424 |
Q |
| |
|
|| | |||| ||||||||||| | |||||||| ||||| |||||||| |
|
|
| T |
30222782 |
agttctagatttgtatggaatgatgttaaccccttccccacctccatctct |
30222832 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 174 - 424
Target Start/End: Original strand, 30028444 - 30028694
Alignment:
| Q |
174 |
gtgaaaagatacaccgaagtaaaacaatggccagagatggatcaactaagaaaatgccatcagataatcattccttggtcatatatttacaagcttcctg |
273 |
Q |
| |
|
|||||||| ||| ||||||| |||||||||||| ||| ||||| || ||| | |||||| || || | |||||||| |||||| | ||||||||| |
|
|
| T |
30028444 |
gtgaaaaggtactccgaagtcaaacaatggccaacgatagatcagcttcaaaagttccatcaaatcattttgccttggtcttatattaatgagcttcctg |
30028543 |
T |
|
| Q |
274 |
aaaagctggagtgcccagagctaaagctactactacttcataatatagatgactttttgaaagtccctgatgacttcttctccgggatgagagagctaaa |
373 |
Q |
| |
|
| ||| |||||||||||||| | | |||||| |||||||||||||||| ||| |||||||||| ||||||| || ||||| ||||||||||| |||| |
|
|
| T |
30028544 |
agaagttggagtgcccagagttgaggctacttctacttcataatataggcgacaatttgaaagtctctgatgagtttttctctgggatgagagaagtaaa |
30028643 |
T |
|
| Q |
374 |
ggtcattaatttatatggaatgatacttaccccttctccaccaccatctct |
424 |
Q |
| |
|
|| | |||| ||||||||||| | |||||||| ||||| |||||||| |
|
|
| T |
30028644 |
agttctagatttgtatggaatgatgttaaccccttccccacctccatctct |
30028694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 174 - 424
Target Start/End: Original strand, 30112978 - 30113228
Alignment:
| Q |
174 |
gtgaaaagatacaccgaagtaaaacaatggccagagatggatcaactaagaaaatgccatcagataatcattccttggtcatatatttacaagcttcctg |
273 |
Q |
| |
|
|||||||| ||| ||||||| |||||||||||| ||| ||||| || ||| | |||||| || || | |||||||| |||||| | ||||||||| |
|
|
| T |
30112978 |
gtgaaaaggtactccgaagtcaaacaatggccaatgatagatcagcttcaaaagttccatcaaatcattttgccttggtcttatattaatgagcttcctg |
30113077 |
T |
|
| Q |
274 |
aaaagctggagtgcccagagctaaagctactactacttcataatatagatgactttttgaaagtccctgatgacttcttctccgggatgagagagctaaa |
373 |
Q |
| |
|
| ||| |||||||||||||| | | |||||| |||||||||||||||| ||| |||||||||| ||||||| || ||||| ||||||||||| ||| |
|
|
| T |
30113078 |
agaagttggagtgcccagagttgaggctacttctacttcataatataggcgacaatttgaaagtctctgatgagtttttctctgggatgagagaagtaag |
30113177 |
T |
|
| Q |
374 |
ggtcattaatttatatggaatgatacttaccccttctccaccaccatctct |
424 |
Q |
| |
|
|| | |||| ||||||||||| | |||||||| ||||| |||||||| |
|
|
| T |
30113178 |
agttctagatttgtatggaatgatgttaaccccttccccacctccatctct |
30113228 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 246 - 366
Target Start/End: Original strand, 30091197 - 30091317
Alignment:
| Q |
246 |
ccttggtcatatatttacaagcttcctgaaaagctggagtgcccagagctaaagctactactacttcataatatagatgactttttgaaagtccctgatg |
345 |
Q |
| |
|
|||||||| |||||| | |||||||||| ||| |||||||||||||| | | |||||| |||||||||||||||| ||| |||||||||| |||||| |
|
|
| T |
30091197 |
ccttggtcttatattaatgagcttcctgagaagttggagtgcccagagttgaggctacttctacttcataatataggcgacaatttgaaagtctctgatg |
30091296 |
T |
|
| Q |
346 |
acttcttctccgggatgagag |
366 |
Q |
| |
|
| || ||||| |||||||||| |
|
|
| T |
30091297 |
agtttttctctgggatgagag |
30091317 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 246 - 366
Target Start/End: Original strand, 30101515 - 30101635
Alignment:
| Q |
246 |
ccttggtcatatatttacaagcttcctgaaaagctggagtgcccagagctaaagctactactacttcataatatagatgactttttgaaagtccctgatg |
345 |
Q |
| |
|
|||||||| |||||| | |||||||||| ||| |||||||||||||| | | |||||| |||||||||||||||| ||| |||||||||| |||||| |
|
|
| T |
30101515 |
ccttggtcttatattaatgagcttcctgagaagttggagtgcccagagttgaggctacttctacttcataatataggcgacaatttgaaagtctctgatg |
30101614 |
T |
|
| Q |
346 |
acttcttctccgggatgagag |
366 |
Q |
| |
|
| || ||||| |||||||||| |
|
|
| T |
30101615 |
agtttttctctgggatgagag |
30101635 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 246 - 366
Target Start/End: Original strand, 30127802 - 30127922
Alignment:
| Q |
246 |
ccttggtcatatatttacaagcttcctgaaaagctggagtgcccagagctaaagctactactacttcataatatagatgactttttgaaagtccctgatg |
345 |
Q |
| |
|
|||||||| |||||| | |||||||||| ||| |||||||||||||| | | |||||| |||||||||||||||| ||| |||||||||| |||||| |
|
|
| T |
30127802 |
ccttggtcttatattaatgagcttcctgagaagttggagtgcccagagttgaggctacttctacttcataatataggcgacaatttgaaagtctctgatg |
30127901 |
T |
|
| Q |
346 |
acttcttctccgggatgagag |
366 |
Q |
| |
|
| || ||||| |||||||||| |
|
|
| T |
30127902 |
agtttttctctgggatgagag |
30127922 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 174 - 397
Target Start/End: Original strand, 30170042 - 30170265
Alignment:
| Q |
174 |
gtgaaaagatacaccgaagtaaaacaatggccagagatggatcaactaagaaaatgccatcagataatcattccttggtcatatatttacaagcttcctg |
273 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||| || || || |||||||||||| || || | |||||||| |||||| | ||||||||| |
|
|
| T |
30170042 |
gtgaaaagatacactcaagtaaaacaatggccagagatagaccagcttcaaaaatgccatcaaatcattttcccttggtcttatattgaagagcttcctg |
30170141 |
T |
|
| Q |
274 |
aaaagctggagtgcccagagctaaagctactactacttcataatatagatgactttttgaaagtccctgatgacttcttctccgggatgagagagctaaa |
373 |
Q |
| |
|
| ||| ||||||| |||||| | || ||||| | ||||| | ||||| ||| ||||||| |||||||||| || || || | || ||||| ||||| |
|
|
| T |
30170142 |
agaagttggagtgtccagagttgaaactactcgttcttcaaactataggtgatcatttgaaaatccctgatgagtttttttctgagacaagagaactaaa |
30170241 |
T |
|
| Q |
374 |
ggtcattaatttatatggaatgat |
397 |
Q |
| |
|
||| || |||| ||||||||||| |
|
|
| T |
30170242 |
ggttcttgatttgtatggaatgat |
30170265 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 17 - 91
Target Start/End: Original strand, 30278210 - 30278284
Alignment:
| Q |
17 |
cacattgacggatgcaagaatcagtttctacaaattaataaacgacctgaaggcctcttcgttgttacttgagtc |
91 |
Q |
| |
|
||||||||| |||||||||| ||| | ||||||||||||||| || || ||||||||||| |||||||||||||| |
|
|
| T |
30278210 |
cacattgacagatgcaagaaacagatgctacaaattaataaatgatctcaaggcctcttcattgttacttgagtc |
30278284 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 416
Target Start/End: Original strand, 30021961 - 30022010
Alignment:
| Q |
367 |
agctaaaggtcattaatttatatggaatgatacttaccccttctccacca |
416 |
Q |
| |
|
||||||||||||||| ||||||||||||||| || |||| ||||||||| |
|
|
| T |
30021961 |
agctaaaggtcattagtttatatggaatgatgtttgccccctctccacca |
30022010 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 416
Target Start/End: Complemental strand, 30038734 - 30038685
Alignment:
| Q |
367 |
agctaaaggtcattaatttatatggaatgatacttaccccttctccacca |
416 |
Q |
| |
|
||||||||||||||| ||||||||||||||| || |||| ||||||||| |
|
|
| T |
30038734 |
agctaaaggtcattagtttatatggaatgatgtttgccccctctccacca |
30038685 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 416
Target Start/End: Original strand, 30080367 - 30080416
Alignment:
| Q |
367 |
agctaaaggtcattaatttatatggaatgatacttaccccttctccacca |
416 |
Q |
| |
|
||||||||||||||| ||||||||||||||| || |||| ||||||||| |
|
|
| T |
30080367 |
agctaaaggtcattagtttatatggaatgatgtttgccccctctccacca |
30080416 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 416
Target Start/End: Complemental strand, 30108212 - 30108163
Alignment:
| Q |
367 |
agctaaaggtcattaatttatatggaatgatacttaccccttctccacca |
416 |
Q |
| |
|
||||||||||||||| ||||||||||||||| || |||| ||||||||| |
|
|
| T |
30108212 |
agctaaaggtcattagtttatatggaatgatgtttgccccctctccacca |
30108163 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 416
Target Start/End: Complemental strand, 30232872 - 30232823
Alignment:
| Q |
367 |
agctaaaggtcattaatttatatggaatgatacttaccccttctccacca |
416 |
Q |
| |
|
||||||||||||||| ||||||||||||||| || |||| ||||||||| |
|
|
| T |
30232872 |
agctaaaggtcattagtttatatggaatgatgtttgccccctctccacca |
30232823 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 30272229 - 30272312
Alignment:
| Q |
5 |
tagacactatcacacattgacggatgcaagaatcagtttctacaaattaataaacgacctgaaggcctcttcgttgttacttga |
88 |
Q |
| |
|
||||||| |||||||||||| ||||||||| ||| | |||||| ||||||| |||||| |||||||||||| |||||||||| |
|
|
| T |
30272229 |
tagacacgctcacacattgacagatgcaagagccagatactacaagttaataagcgaccttaaggcctcttcgctgttacttga |
30272312 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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