View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10133_high_13 (Length: 248)
Name: NF10133_high_13
Description: NF10133
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10133_high_13 |
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Alignment Details
Target: chr1 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 18 - 235
Target Start/End: Original strand, 38766582 - 38766798
Alignment:
| Q |
18 |
tgtgaagaatcacgagaagatagggagataaatcatactcataagaatactaatgagacaaaaactcataagaaatgatatttgattgataaaagataga |
117 |
Q |
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| T |
38766582 |
tgtgaagaatcatgagaagatagggagataaatcatactcataagaatactaatgagacaaaa-ctcataagaaatgatatttgattgataaaagataga |
38766680 |
T |
|
| Q |
118 |
taaagtgtttacgtagccttatttatacaacattttaatatgactcatatatagatacaaaagagagacaaaggcggaagttgagctagcggagcgttgt |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
38766681 |
taaagtgtttacgtagccttatttatacaacattttaatatgactcatatatagatacaaaagagagacaaaggtggaagttgagctagcggagcgttgt |
38766780 |
T |
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| Q |
218 |
gaagctccttttactcct |
235 |
Q |
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||||||| |||||||||| |
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| T |
38766781 |
gaagctcattttactcct |
38766798 |
T |
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