View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10133_low_18 (Length: 323)
Name: NF10133_low_18
Description: NF10133
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10133_low_18 |
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Alignment Details
Target: chr7 (Bit Score: 285; Significance: 1e-160; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 35617919 - 35617611
Alignment:
| Q |
1 |
tactagtaccatgtttaagatcttcctgcacaatactcttctcctgcactttatattcgccttcggctgttacttcctcctccaatatcccagtatcgta |
100 |
Q |
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| T |
35617919 |
tactagtaccatgtttaagatcttccttcacaatactcttctcctgcactttatattcgccttcggctgttacttcctcctccattatcccagtatcgca |
35617820 |
T |
|
| Q |
101 |
aactggaaacttgactgtttttgttgctgttgatttcacagtagcactttcatcatttttcttacatgcatccatattcttgtcattccttgctctctca |
200 |
Q |
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||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35617819 |
aaccggaaacttgactgcttttgttgctgttgatttcacagtagcactttcatcatttttcttacatgcatccatattcttgtcattccttgctctctca |
35617720 |
T |
|
| Q |
201 |
gttacctcaaaatcccttccgtcgtttatttcttccttgctatgattcgaggaagcatcaagtgattgaatcagatttgcatgagactccaccgttgcag |
300 |
Q |
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||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35617719 |
gttacctcaaaatcccttctgtcgtttatttcttccttgctatgattcgaggaagcatcaagtgattgaatcagatttgcatgagactccaccgttgcag |
35617620 |
T |
|
| Q |
301 |
aagtctgtg |
309 |
Q |
| |
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||||||||| |
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| T |
35617619 |
aagtctgtg |
35617611 |
T |
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