View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10133_low_31 (Length: 201)
Name: NF10133_low_31
Description: NF10133
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10133_low_31 |
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Alignment Details
Target: chr3 (Bit Score: 171; Significance: 5e-92; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 15 - 185
Target Start/End: Complemental strand, 47838133 - 47837963
Alignment:
| Q |
15 |
acatcataatttatacaacaaagggtgtataatttacaataggaatttgtcatttatcatcttggaacatgaatacttcacctgagctgggactgccttt |
114 |
Q |
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| T |
47838133 |
acatcataatttatacaacaaagggtgtataatttacaataggaatttgtcatttatcatcttggaacatgaatacttcacctgagctgggactgccttt |
47838034 |
T |
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| Q |
115 |
gccaattgggcaggtagttctgttatactagtaaacactgatagttgactgataatagacccggtaaaaac |
185 |
Q |
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| T |
47838033 |
gccaattgggcaggtagttctgttatactagtaaacactgatagttgactgataatagacccggtaaaaac |
47837963 |
T |
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