View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10133_low_4 (Length: 407)
Name: NF10133_low_4
Description: NF10133
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10133_low_4 |
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Alignment Details
Target: chr7 (Bit Score: 369; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 369; E-Value: 0
Query Start/End: Original strand, 20 - 392
Target Start/End: Original strand, 32363777 - 32364149
Alignment:
| Q |
20 |
tcattccagttcctttggcacctcgacgcagtacaataccttgaaagagatagactggatttggtagagtctgcataaaaaggtagtgcaaaagaatgtg |
119 |
Q |
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| T |
32363777 |
tcattccagttcctttggcacctcgacgcagtacaataccttgaaagagatagactggatttggtagagtctgcataaaaaggtagtgcaaaagaatgtg |
32363876 |
T |
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| Q |
120 |
gataaactaactctaggaagtatacaatggcaaccatcttcatcaaatttatataccaaaaggcatcaaataaatatctatcaaagaacaaattctcacc |
219 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
32363877 |
gataaactaactctaggaagtatacaatggcaaccatcttcatcaaatttatataccaaaaggcatcaaataaatatctatcaaagaacagattctcacc |
32363976 |
T |
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| Q |
220 |
tttataactgcattgatttctctgtgtgtcagactttttattatgagtacctcatcatctgcaaaataacaaaattaatttactcatttaataaatgtaa |
319 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32363977 |
tttataactgcattgatttctctgtgtgtcagactttttattatgagtacctcatcatctgcaaaataacaaaattaatttactcatttaataaatgtaa |
32364076 |
T |
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| Q |
320 |
acactagatttctagttgagtgaaattctagatttctagttacacgggatagggaacctatctaccagttgat |
392 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32364077 |
acactagatttctagttgagtgaaattctagatttctagttacacgggatagggaacctatctaccagttgat |
32364149 |
T |
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