View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10136_low_8 (Length: 293)
Name: NF10136_low_8
Description: NF10136
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10136_low_8 |
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Alignment Details
Target: chr4 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 49 - 275
Target Start/End: Complemental strand, 7518326 - 7518100
Alignment:
| Q |
49 |
acagactggaggatacaacactagcaacaatgaagacctacgaaaagagttccaaagtcagatcattcaacaaatcaaaaaagttatgatttttaagaaa |
148 |
Q |
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| T |
7518326 |
acagactggaggatacaacactagcaacaatgaagacctacgaaaagagttctaaagtcagatcattcaacaaatcaaaaaagttatgatttttaagaaa |
7518227 |
T |
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| Q |
149 |
ttgaaaaattataatcaacatgctgtattgatgatccatgcattttaatttcaatatttgtctccactaacattgctcagatatgcagtgatacacaaga |
248 |
Q |
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| T |
7518226 |
ttgaaaaattataatcaacatgctgtattgatgatccatgcattttaatttcaatatttgtctccactaacattgctcagatatgcagtgatacacaaga |
7518127 |
T |
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| Q |
249 |
cggttcttacttgattttggcccctag |
275 |
Q |
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||||||||||||||||||||||||||| |
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| T |
7518126 |
cggttcttacttgattttggcccctag |
7518100 |
T |
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