View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10137_high_7 (Length: 229)
Name: NF10137_high_7
Description: NF10137
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10137_high_7 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 174; Significance: 9e-94; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 53693633 - 53693406
Alignment:
| Q |
1 |
agtagcatcaactgcaataagtattcaataccatacctagacatatgagttaaaatcagtggtgtaaggtttaactcaaaacaaacggaagatcattatc |
100 |
Q |
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| T |
53693633 |
agtagcatcaactgcaataagtattcaataccatacctagacatatgagttataatcagtggtgtaaggtttaactcaaaacaaacggaagatcattatc |
53693534 |
T |
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| Q |
101 |
actataactatgtgacagggaagaacgtagtttaaaatctgtcnnnnnnnnnnnnncacttagtttaaaatctgtagacaatacaaagcatcatttattg |
200 |
Q |
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| T |
53693533 |
actataactatgtgacagggaagaacatagtttaaaatctgtcaaaaaaaaaaaaa-acttagtttaaaatctgtagacaatacaaagcatcatttattg |
53693435 |
T |
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| Q |
201 |
gctacttcatattttcttccaatttcact |
229 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
53693434 |
gctacttcatattttcttccaatttcact |
53693406 |
T |
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