View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10137_low_21 (Length: 224)

Name: NF10137_low_21
Description: NF10137
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10137_low_21
NF10137_low_21
[»] chr1 (60 HSPs)
chr1 (3-110)||(38162851-38162958)
chr1 (3-110)||(29210414-29210521)
chr1 (3-110)||(18043163-18043270)
chr1 (10-110)||(42770075-42770175)
chr1 (3-110)||(14350355-14350462)
chr1 (3-90)||(30294459-30294546)
chr1 (3-110)||(35985699-35985805)
chr1 (11-98)||(47010006-47010093)
chr1 (3-110)||(51368863-51368970)
chr1 (3-109)||(38702011-38702117)
chr1 (11-110)||(5694322-5694421)
chr1 (11-110)||(17333368-17333466)
chr1 (11-100)||(6770348-6770437)
chr1 (134-214)||(34577897-34577977)
chr1 (11-98)||(3784799-3784886)
chr1 (11-110)||(9266814-9266913)
chr1 (11-110)||(24178549-24178648)
chr1 (11-110)||(29657772-29657871)
chr1 (11-110)||(51065834-51065933)
chr1 (11-97)||(3097673-3097759)
chr1 (20-110)||(47532765-47532854)
chr1 (11-100)||(12072148-12072237)
chr1 (11-83)||(15282600-15282672)
chr1 (11-110)||(13961213-13961311)
chr1 (11-110)||(15227740-15227839)
chr1 (11-78)||(50128258-50128325)
chr1 (11-109)||(36446411-36446508)
chr1 (11-92)||(48071501-48071582)
chr1 (11-110)||(30657609-30657708)
chr1 (11-78)||(45431311-45431378)
chr1 (11-84)||(38335196-38335269)
chr1 (11-79)||(19031901-19031969)
chr1 (11-110)||(29683196-29683296)
chr1 (11-87)||(39497331-39497407)
chr1 (11-110)||(12306919-12307017)
chr1 (11-86)||(26228218-26228293)
chr1 (11-81)||(8473000-8473070)
chr1 (11-84)||(43286749-43286822)
chr1 (14-67)||(52431625-52431678)
chr1 (11-81)||(23473550-23473620)
chr1 (11-81)||(45449330-45449400)
chr1 (14-83)||(35700739-35700808)
chr1 (14-67)||(37315356-37315409)
chr1 (14-110)||(39912368-39912464)
chr1 (11-110)||(41730306-41730408)
chr1 (14-65)||(37503260-37503311)
chr1 (14-84)||(3838866-3838936)
chr1 (11-110)||(28481845-28481940)
chr1 (11-100)||(48383197-48383286)
chr1 (14-88)||(33644423-33644498)
chr1 (15-53)||(19011057-19011095)
chr1 (37-90)||(19011108-19011161)
chr1 (31-85)||(10976008-10976062)
chr1 (17-67)||(49867474-49867524)
chr1 (11-81)||(52749632-52749702)
chr1 (14-85)||(39081827-39081898)
chr1 (14-67)||(16590304-16590356)
chr1 (11-85)||(30217786-30217862)
chr1 (20-110)||(28725999-28726091)
chr1 (14-96)||(30664255-30664339)
[»] chr8 (52 HSPs)
chr8 (3-110)||(168467-168574)
chr8 (3-110)||(30675650-30675757)
chr8 (3-110)||(21595848-21595954)
chr8 (11-110)||(27988585-27988684)
chr8 (11-110)||(28045887-28045986)
chr8 (11-110)||(33357215-33357314)
chr8 (11-98)||(42035067-42035154)
chr8 (11-110)||(11112640-11112739)
chr8 (3-110)||(12203856-12203962)
chr8 (3-110)||(12448284-12448390)
chr8 (11-110)||(16888630-16888728)
chr8 (11-100)||(13643023-13643112)
chr8 (11-100)||(13743448-13743537)
chr8 (11-108)||(29444226-29444323)
chr8 (11-100)||(32113919-32114008)
chr8 (11-110)||(4537830-4537929)
chr8 (3-90)||(4648215-4648302)
chr8 (11-78)||(7304604-7304671)
chr8 (11-90)||(9063138-9063217)
chr8 (11-110)||(34228683-34228782)
chr8 (11-110)||(37373207-37373305)
chr8 (11-110)||(43119218-43119317)
chr8 (11-109)||(20831639-20831737)
chr8 (11-85)||(40831303-40831377)
chr8 (11-84)||(36730471-36730544)
chr8 (11-83)||(9537910-9537982)
chr8 (11-110)||(2805346-2805445)
chr8 (11-110)||(16394147-16394246)
chr8 (11-100)||(10618029-10618118)
chr8 (11-79)||(16890566-16890634)
chr8 (11-110)||(9278213-9278312)
chr8 (11-110)||(16785088-16785186)
chr8 (34-110)||(12652631-12652707)
chr8 (11-71)||(34192815-34192875)
chr8 (20-90)||(9253996-9254066)
chr8 (11-81)||(10870382-10870452)
chr8 (11-85)||(28626794-28626868)
chr8 (11-90)||(29235256-29235335)
chr8 (14-67)||(42433632-42433685)
chr8 (11-71)||(3930319-3930379)
chr8 (14-61)||(22451834-22451881)
chr8 (11-84)||(17467630-17467703)
chr8 (14-57)||(30933410-30933453)
chr8 (3-85)||(22956732-22956813)
chr8 (14-67)||(34890647-34890700)
chr8 (14-67)||(4811602-4811656)
chr8 (14-67)||(16196893-16196947)
chr8 (33-107)||(17913543-17913617)
chr8 (14-67)||(33124581-33124635)
chr8 (14-110)||(39751559-39751657)
chr8 (2-39)||(24843356-24843393)
chr8 (11-48)||(39406905-39406942)
[»] chr7 (48 HSPs)
chr7 (3-110)||(5239286-5239393)
chr7 (3-110)||(34333285-34333392)
chr7 (3-110)||(24438478-24438585)
chr7 (11-110)||(47656981-47657080)
chr7 (2-110)||(29993564-29993672)
chr7 (11-110)||(8754671-8754770)
chr7 (11-110)||(12218522-12218621)
chr7 (11-90)||(30810676-30810755)
chr7 (11-110)||(34606262-34606361)
chr7 (11-110)||(24798489-24798587)
chr7 (11-110)||(28587911-28588009)
chr7 (3-82)||(45045799-45045878)
chr7 (11-108)||(23363253-23363349)
chr7 (11-83)||(11686410-11686482)
chr7 (11-110)||(18485962-18486061)
chr7 (11-110)||(27456199-27456297)
chr7 (11-110)||(43594122-43594221)
chr7 (15-80)||(34546404-34546469)
chr7 (11-110)||(1736981-1737080)
chr7 (11-110)||(4628567-4628666)
chr7 (11-110)||(5729347-5729446)
chr7 (11-110)||(37631628-37631727)
chr7 (3-85)||(42044371-42044453)
chr7 (11-84)||(525161-525234)
chr7 (11-83)||(47839520-47839592)
chr7 (11-110)||(7689286-7689385)
chr7 (11-90)||(47083076-47083155)
chr7 (11-84)||(33636479-33636552)
chr7 (11-60)||(37674190-37674239)
chr7 (11-71)||(18117183-18117243)
chr7 (11-81)||(13064963-13065033)
chr7 (37-110)||(23357819-23357892)
chr7 (14-66)||(22739868-22739920)
chr7 (14-84)||(4087650-4087720)
chr7 (14-80)||(18220527-18220593)
chr7 (11-89)||(46716660-46716738)
chr7 (11-100)||(28262042-28262126)
chr7 (13-85)||(4100612-4100684)
chr7 (16-67)||(18470030-18470081)
chr7 (14-80)||(3021922-3021988)
chr7 (14-67)||(18220759-18220812)
chr7 (14-83)||(36437405-36437474)
chr7 (11-81)||(29835790-29835860)
chr7 (18-67)||(18220624-18220673)
chr7 (14-49)||(13556474-13556509)
chr7 (26-60)||(20116941-20116975)
chr7 (42-96)||(22973613-22973667)
chr7 (14-65)||(38022580-38022632)
[»] chr4 (51 HSPs)
chr4 (3-110)||(43944508-43944615)
chr4 (3-110)||(789608-789715)
chr4 (3-110)||(4089143-4089250)
chr4 (3-110)||(15186244-15186351)
chr4 (3-110)||(4268900-4269007)
chr4 (3-110)||(16536049-16536156)
chr4 (3-110)||(18067957-18068064)
chr4 (3-90)||(7768959-7769046)
chr4 (3-110)||(43202461-43202568)
chr4 (11-110)||(32202566-32202665)
chr4 (11-110)||(32217046-32217145)
chr4 (3-110)||(37987937-37988043)
chr4 (11-110)||(42898832-42898931)
chr4 (11-110)||(54897309-54897408)
chr4 (11-110)||(55882685-55882783)
chr4 (11-85)||(28755646-28755720)
chr4 (11-110)||(4220196-4220295)
chr4 (11-110)||(24679728-24679826)
chr4 (11-110)||(29591190-29591289)
chr4 (11-110)||(33108759-33108857)
chr4 (11-98)||(39843920-39844007)
chr4 (11-110)||(47231958-47232057)
chr4 (11-90)||(50619107-50619186)
chr4 (11-85)||(6164120-6164193)
chr4 (11-85)||(54655962-54656036)
chr4 (11-85)||(54945864-54945938)
chr4 (11-84)||(31680549-31680622)
chr4 (11-83)||(19503191-19503263)
chr4 (11-71)||(36395139-36395199)
chr4 (11-110)||(52533871-52533970)
chr4 (11-85)||(49915185-49915259)
chr4 (3-84)||(50603254-50603335)
chr4 (11-83)||(12356272-12356344)
chr4 (11-110)||(46688291-46688395)
chr4 (11-110)||(3783587-3783686)
chr4 (15-85)||(50167617-50167685)
chr4 (11-110)||(54054549-54054648)
chr4 (11-60)||(30387220-30387269)
chr4 (11-88)||(42815132-42815209)
chr4 (11-84)||(53655964-53656037)
chr4 (11-71)||(30154249-30154309)
chr4 (14-67)||(41265503-41265556)
chr4 (11-71)||(46148979-46149039)
chr4 (11-90)||(5091696-5091775)
chr4 (14-60)||(53268771-53268817)
chr4 (11-80)||(52697083-52697151)
chr4 (11-59)||(31517217-31517265)
chr4 (36-85)||(1432653-1432702)
chr4 (11-47)||(39877335-39877371)
chr4 (52-110)||(39877554-39877611)
chr4 (11-51)||(16820912-16820952)
[»] chr6 (41 HSPs)
chr6 (3-110)||(392097-392204)
chr6 (125-214)||(32590128-32590217)
chr6 (125-214)||(32600576-32600665)
chr6 (3-110)||(3515767-3515874)
chr6 (3-110)||(4215696-4215803)
chr6 (3-110)||(27433493-27433600)
chr6 (8-110)||(12525720-12525822)
chr6 (11-110)||(7851245-7851344)
chr6 (11-110)||(12145203-12145302)
chr6 (11-110)||(20897949-20898048)
chr6 (11-110)||(23402139-23402238)
chr6 (11-110)||(32929594-32929693)
chr6 (11-109)||(2350654-2350752)
chr6 (12-96)||(13529470-13529554)
chr6 (11-110)||(18276701-18276799)
chr6 (11-110)||(21878433-21878532)
chr6 (11-110)||(23629662-23629760)
chr6 (11-110)||(29451201-29451299)
chr6 (11-110)||(34396613-34396712)
chr6 (3-85)||(3026087-3026169)
chr6 (11-85)||(26467210-26467284)
chr6 (11-85)||(34477636-34477710)
chr6 (11-110)||(1391264-1391362)
chr6 (3-110)||(31280322-31280429)
chr6 (11-100)||(32985279-32985368)
chr6 (10-85)||(11115180-11115255)
chr6 (10-85)||(13417047-13417122)
chr6 (11-83)||(2580980-2581052)
chr6 (11-71)||(34851935-34851995)
chr6 (11-110)||(29978234-29978332)
chr6 (11-81)||(25165499-25165569)
chr6 (11-84)||(35043917-35043989)
chr6 (11-69)||(961051-961109)
chr6 (11-80)||(28225252-28225320)
chr6 (11-87)||(1840333-1840409)
chr6 (11-87)||(5323424-5323500)
chr6 (11-79)||(9661018-9661086)
chr6 (169-210)||(24883733-24883774)
chr6 (20-108)||(3246181-3246270)
chr6 (3-59)||(11633970-11634027)
chr6 (20-60)||(10431787-10431827)
[»] chr3 (47 HSPs)
chr3 (3-110)||(39074420-39074527)
chr3 (3-110)||(52520682-52520789)
chr3 (10-110)||(43786872-43786972)
chr3 (10-110)||(20923993-20924093)
chr3 (11-110)||(272221-272320)
chr3 (3-90)||(53489902-53489989)
chr3 (11-109)||(43269825-43269923)
chr3 (11-110)||(4168184-4168283)
chr3 (11-90)||(41554026-41554105)
chr3 (11-110)||(42964335-42964434)
chr3 (11-110)||(46352635-46352734)
chr3 (11-110)||(49893332-49893431)
chr3 (11-110)||(10617370-10617468)
chr3 (11-110)||(48725272-48725371)
chr3 (11-110)||(52246583-52246682)
chr3 (11-100)||(858600-858689)
chr3 (11-110)||(2119432-2119531)
chr3 (11-110)||(18014673-18014772)
chr3 (11-110)||(40362666-40362765)
chr3 (11-84)||(7468438-7468511)
chr3 (11-100)||(50395648-50395737)
chr3 (11-110)||(41304006-41304103)
chr3 (11-85)||(50359272-50359346)
chr3 (11-84)||(28139336-28139409)
chr3 (11-83)||(2938126-2938198)
chr3 (11-79)||(13159929-13159997)
chr3 (11-79)||(29241669-29241737)
chr3 (11-90)||(49529352-49529434)
chr3 (11-81)||(2505379-2505449)
chr3 (11-85)||(22248912-22248986)
chr3 (11-85)||(42548121-42548195)
chr3 (11-71)||(31514831-31514891)
chr3 (11-67)||(50299031-50299087)
chr3 (11-60)||(41993705-41993754)
chr3 (11-59)||(33140937-33140985)
chr3 (30-85)||(2391633-2391688)
chr3 (30-85)||(2393394-2393449)
chr3 (11-110)||(11308296-11308395)
chr3 (26-84)||(52718194-52718252)
chr3 (11-79)||(38852246-38852317)
chr3 (11-54)||(6842676-6842719)
chr3 (12-50)||(6842604-6842642)
chr3 (11-85)||(24488392-24488466)
chr3 (14-67)||(21010041-21010092)
chr3 (11-60)||(2362883-2362931)
chr3 (16-54)||(6842636-6842674)
chr3 (31-95)||(51818981-51819045)
[»] chr2 (44 HSPs)
chr2 (3-100)||(4381806-4381903)
chr2 (3-110)||(27856474-27856581)
chr2 (2-110)||(561595-561703)
chr2 (11-110)||(2898073-2898171)
chr2 (3-100)||(3668191-3668287)
chr2 (3-110)||(6580190-6580297)
chr2 (11-110)||(26387150-26387249)
chr2 (11-110)||(31438647-31438746)
chr2 (11-110)||(20552932-20553031)
chr2 (11-110)||(22887751-22887850)
chr2 (11-110)||(31390013-31390112)
chr2 (11-110)||(32860103-32860202)
chr2 (11-110)||(34442618-34442716)
chr2 (11-110)||(44587903-44588002)
chr2 (11-85)||(8969493-8969567)
chr2 (11-84)||(43637191-43637264)
chr2 (11-110)||(26891749-26891848)
chr2 (11-110)||(30486211-30486310)
chr2 (11-89)||(5093625-5093703)
chr2 (11-85)||(38296203-38296277)
chr2 (11-84)||(22567629-22567702)
chr2 (11-110)||(11021308-11021406)
chr2 (11-110)||(32360955-32361054)
chr2 (11-80)||(27584769-27584838)
chr2 (11-90)||(5881238-5881321)
chr2 (11-96)||(22068406-22068490)
chr2 (14-67)||(39531868-39531921)
chr2 (11-110)||(1859163-1859262)
chr2 (11-110)||(38590960-38591059)
chr2 (14-67)||(15079047-15079100)
chr2 (11-83)||(13574115-13574187)
chr2 (11-85)||(28600993-28601066)
chr2 (11-85)||(35851837-35851911)
chr2 (14-110)||(34123113-34123209)
chr2 (11-84)||(25782919-25782989)
chr2 (11-81)||(29102369-29102439)
chr2 (11-71)||(4022565-4022624)
chr2 (11-110)||(25772112-25772211)
chr2 (14-61)||(15146682-15146729)
chr2 (20-109)||(16807318-16807409)
chr2 (20-109)||(16846599-16846690)
chr2 (24-67)||(30217662-30217705)
chr2 (73-110)||(35470368-35470405)
chr2 (20-67)||(29999083-29999131)
[»] chr5 (31 HSPs)
chr5 (3-110)||(12506297-12506404)
chr5 (3-110)||(34650911-34651017)
chr5 (3-110)||(35504318-35504425)
chr5 (3-110)||(10054430-10054537)
chr5 (11-110)||(13661809-13661908)
chr5 (10-110)||(8787340-8787440)
chr5 (11-110)||(6283563-6283662)
chr5 (11-110)||(35132523-35132622)
chr5 (20-110)||(10069970-10070060)
chr5 (11-110)||(4837259-4837357)
chr5 (11-110)||(31909633-31909731)
chr5 (11-92)||(19647744-19647825)
chr5 (11-110)||(2619643-2619742)
chr5 (11-110)||(13470152-13470251)
chr5 (11-80)||(21547480-21547549)
chr5 (11-110)||(11958053-11958152)
chr5 (11-78)||(40564490-40564557)
chr5 (11-83)||(9721693-9721765)
chr5 (22-110)||(39069382-39069469)
chr5 (11-110)||(20175228-20175327)
chr5 (11-77)||(11846106-11846172)
chr5 (11-78)||(40057340-40057407)
chr5 (15-84)||(19436926-19436995)
chr5 (14-84)||(6284822-6284892)
chr5 (11-84)||(39067021-39067095)
chr5 (14-53)||(4268620-4268659)
chr5 (14-95)||(10955967-10956048)
chr5 (20-110)||(21944954-21945046)
chr5 (20-85)||(6042142-6042208)
chr5 (29-67)||(12289458-12289496)
chr5 (14-66)||(25731461-25731514)
[»] scaffold0524 (1 HSPs)
scaffold0524 (2-99)||(837-934)
[»] scaffold0003 (1 HSPs)
scaffold0003 (3-110)||(53763-53870)
[»] scaffold0264 (1 HSPs)
scaffold0264 (11-110)||(22962-23061)
[»] scaffold0045 (2 HSPs)
scaffold0045 (2-110)||(50549-50657)
scaffold0045 (11-84)||(53432-53505)
[»] scaffold0674 (1 HSPs)
scaffold0674 (11-85)||(7983-8057)
[»] scaffold0549 (1 HSPs)
scaffold0549 (11-85)||(7314-7388)
[»] scaffold0021 (1 HSPs)
scaffold0021 (11-100)||(116215-116304)
[»] scaffold1152 (1 HSPs)
scaffold1152 (11-98)||(691-778)
[»] scaffold0188 (1 HSPs)
scaffold0188 (11-110)||(6196-6295)
[»] scaffold1266 (1 HSPs)
scaffold1266 (11-85)||(318-392)
[»] scaffold0014 (1 HSPs)
scaffold0014 (2-110)||(68367-68475)
[»] scaffold0206 (1 HSPs)
scaffold0206 (11-84)||(11056-11129)
[»] scaffold0002 (1 HSPs)
scaffold0002 (11-79)||(146991-147059)
[»] scaffold0190 (1 HSPs)
scaffold0190 (11-110)||(14897-14996)
[»] scaffold0325 (1 HSPs)
scaffold0325 (11-85)||(17557-17630)
[»] scaffold0050 (2 HSPs)
scaffold0050 (11-85)||(69252-69326)
scaffold0050 (14-89)||(33770-33845)
[»] scaffold0113 (1 HSPs)
scaffold0113 (13-97)||(40933-41017)
[»] scaffold0038 (1 HSPs)
scaffold0038 (11-80)||(25750-25818)
[»] scaffold0034 (1 HSPs)
scaffold0034 (11-100)||(95670-95759)
[»] scaffold0533 (1 HSPs)
scaffold0533 (14-80)||(5070-5136)
[»] scaffold0263 (1 HSPs)
scaffold0263 (11-80)||(19671-19740)
[»] scaffold0425 (1 HSPs)
scaffold0425 (11-50)||(10771-10810)
[»] scaffold1128 (1 HSPs)
scaffold1128 (20-60)||(1422-1462)
[»] scaffold0007 (1 HSPs)
scaffold0007 (11-46)||(233918-233953)
[»] scaffold0015 (1 HSPs)
scaffold0015 (11-71)||(74559-74620)


Alignment Details
Target: chr1 (Bit Score: 96; Significance: 3e-47; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 38162958 - 38162851
Alignment:
Q  3 ttttcacattattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtca 102  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |    
T  38162958 ttttgacattattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgccccggaggcaccggtta 38162859  T
Q  103 acatttcc 110  Q
    ||||||||    
T  38162858 acatttcc 38162851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 29210521 - 29210414
Alignment:
Q  3 ttttcacattattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtca 102  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |    
T  29210521 ttttgacattattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtgccccggaggcaccggtta 29210422  T
Q  103 acatttcc 110  Q
     |||||||    
T  29210421 gcatttcc 29210414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 18043270 - 18043163
Alignment:
Q  3 ttttcacattattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtca 102  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||||||||| |    
T  18043270 ttttgacattattataaattaattacacaatttcaatgcattaactactatataatttccttttttatacccttaaccagtgccccggaggcaccggtta 18043171  T
Q  103 acatttcc 110  Q
     |||||||    
T  18043170 gcatttcc 18043163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 10 - 110
Target Start/End: Original strand, 42770075 - 42770175
Alignment:
Q  10 attattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttc 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |||| ||||||||| | ||||||    
T  42770075 attattataaattaattacacaatttcaatgcattaactactatataatttcctttttcataccattaaccagtgccccgggggcaccggttagcatttc 42770174  T
Q  110 c 110  Q
    |    
T  42770175 c 42770175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 14350355 - 14350462
Alignment:
Q  3 ttttcacattattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtca 102  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||| ||||||||| ||||||||| |    
T  14350355 ttttgacattattataaattaattacacaattttaatgcattaactacaatataatttcctttttcatacccttaaccggtgctccgggggcaccggtta 14350454  T
Q  103 acatttcc 110  Q
     |||||||    
T  14350455 gcatttcc 14350462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 3 - 90
Target Start/End: Original strand, 30294459 - 30294546
Alignment:
Q  3 ttttcacattattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccgg 90  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||    
T  30294459 ttttgacattattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccaatgctccgg 30294546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 35985699 - 35985805
Alignment:
Q  3 ttttcacattattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtca 102  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||| ||||| ||||| ||||||||| |    
T  35985699 ttttcactttattataaattaattacacaatttcaatgcattaactactatataatttccttttttatatccttaaacagtgatccgg-ggcaccggtta 35985797  T
Q  103 acatttcc 110  Q
    ||||||||    
T  35985798 acatttcc 35985805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 11 - 98
Target Start/End: Complemental strand, 47010093 - 47010006
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccg 98  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||||    
T  47010093 ttattataaattaattacacaatttcaatacattaactactatataatttcctttttcatatccttaaccagtgctccggatgcaccg 47010006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 51368863 - 51368970
Alignment:
Q  3 ttttcacattattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtca 102  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | | ||||| |||||| |    
T  51368863 ttttgacattattataaattaactacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtaccctggaggtaccggtta 51368962  T
Q  103 acatttcc 110  Q
     |||||||    
T  51368963 gcatttcc 51368970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 3 - 109
Target Start/End: Original strand, 38702011 - 38702117
Alignment:
Q  3 ttttcacattattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtca 102  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||  |||||||| |    
T  38702011 ttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgccccgggagcaccggtta 38702110  T
Q  103 acatttc 109  Q
     ||||||    
T  38702111 gcatttc 38702117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 5694421 - 5694322
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| | |||| ||| ||||||||||||| |||||||||||||| | |||||||    
T  5694421 ttattatcaattaattacacaatttcaatgcattaactactatataatttccctttttatatccttaaccagtgccccggaggcaccggttagcatttcc 5694322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 17333368 - 17333466
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||| ||||||||| | |||||||    
T  17333368 ttattatgaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgc-ccgggggcaccggttagcatttcc 17333466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 11 - 100
Target Start/End: Complemental strand, 6770437 - 6770348
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggt 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||  ||||| ||||||||||||||    
T  6770437 ttattataaattaattacacaatttcaatacattaactactatataatttcctttttcatatccttaattagtgccccggaggcaccggt 6770348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 134 - 214
Target Start/End: Original strand, 34577897 - 34577977
Alignment:
Q  134 tgtctcaacaataggtatataaaaattatttcatgcaccttagctaatgcccaaatgctgaaatgggcacgatattcctct 214  Q
    ||||||||||||| ||||||||||| | ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  34577897 tgtctcaacaatatgtatataaaaagtgtttcatgtaccttagctaatgcccaaatgctgaaatgggcacgatattcctct 34577977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 11 - 98
Target Start/End: Original strand, 3784799 - 3784886
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccg 98  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| | || |||||||    
T  3784799 ttattatcaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcactgggggcaccg 3784886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 9266814 - 9266913
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||||||||  ||| | ||||||| |||||||||    
T  9266814 ttattatgaattaattacacaatttcaatgcattaaatactatataatttcctttttcatatccttaaccagtgccgcggggacaccggttaacatttcc 9266913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 24178549 - 24178648
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||| |||| |||| |||| | |||||||    
T  24178549 ttattatagattaattacacaatttcaatgcattaactattatataatttcctttttcatatccttaaccagtgccccgggggcatcggttagcatttcc 24178648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 29657871 - 29657772
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||| |||| ||||||||| | |||||||    
T  29657871 ttattatcaattaattatacaatttcaatgcattaactactatataatttccttttttatatccttaaccagtgccccgggggcaccggttagcatttcc 29657772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 51065834 - 51065933
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||  |||| | ||||||| | |||||||    
T  51065834 ttattataaattaattacacaatttcaatacattaactactatataatttactttttcatatccttaaccagtgtcccggggacaccggttagcatttcc 51065933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 97
Target Start/End: Complemental strand, 3097759 - 3097673
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcacc 97  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||  |||||| ||||||    
T  3097759 ttattataaattaattacataatttcaatgcattaactactatataatttcctttttcatatccttaaccaggactccgggggcacc 3097673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 47532765 - 47532854
Alignment:
Q  20 attaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| |||||||| ||||||| | |||||||    
T  47532765 attaattacacaatttcaatgcattaactactatataattttctttttcatatccttaa-cagtactccggagacaccggttagcatttcc 47532854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 100
Target Start/End: Original strand, 12072148 - 12072237
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggt 100  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||| |||| |||| |||||||||    
T  12072148 ttattatcaattaattacacaatttcaatgcattaactactacataatttcctttttcatatccttaaccggtgccccgggggcaccggt 12072237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 11 - 83
Target Start/End: Original strand, 15282600 - 15282672
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagt 83  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||    
T  15282600 ttattataaattaattacacaatttcaatatattaactactatataattttctttttcatatccttaaccagt 15282672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 13961311 - 13961213
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||| |||| |||| ||||||||| | |||||||    
T  13961311 ttattatcaattaattacacaatttcaatgcattaactactatataatttt-ttttttatatccttaacccgtgccccgggggcaccggttagcatttcc 13961213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 15227839 - 15227740
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||| || | || |||||| | |||||||    
T  15227839 ttattatcaattaattacacaatttcaatgcattaattactatataatttcctttttcatatccttaaccagtgcccccggggtaccggttagcatttcc 15227740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 11 - 78
Target Start/End: Original strand, 50128258 - 50128325
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaa 78  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  50128258 ttattataaattaattacacaatttcaatgcattaactactatgtaattttctttttcatatccttaa 50128325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 36446411 - 36446508
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttc 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||  ||||||||||||  ||| |||||| || ||||||||    
T  36446411 ttattataaattaattacacaatttcaatgcattaactactatataatttccttttt-atattcttaaccagtgcctcgggggcaccagttaacatttc 36446508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 48071582 - 48071501
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggag 92  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| |||| ||||||||||| | ||||||    
T  48071582 ttattataaattaattacacaatttcaatgcattaactattatataatttccttttacatatccttaaccagtaccccggag 48071501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 30657708 - 30657609
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||  |||||| ||||| ||||  |||||||| | |||||||    
T  30657708 ttattataaattaattacataatttcaatgcattaactactatataatttcttttttcatatgcttaactagtgccccgggagcaccggttagcatttcc 30657609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 78
Target Start/End: Complemental strand, 45431378 - 45431311
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaa 78  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||    
T  45431378 ttattataaattaattacacaatttcaatacattaactactatataatttcctttttcatatccttaa 45431311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 84
Target Start/End: Complemental strand, 38335269 - 38335196
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtg 84  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||| |||||||||| | ||||||||||    
T  38335269 ttattataaattaattacacaattacaatgcattaattactatataatttcctttttcatatctttaaccagtg 38335196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 11 - 79
Target Start/End: Original strand, 19031901 - 19031969
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaac 79  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||| |||||||    
T  19031901 ttattataaattaattacacaatttcaatgttttaactactatataatttcctttttcatatccttaac 19031969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 29683296 - 29683196
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttc-tttttcatacccttaaccagtgctccggaggcaccggtcaacatttc 109  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||||| | ||||| ||| | ||||||||||| |||| ||||||||| | ||||||    
T  29683296 ttattataaattaattatacgatttcaatgcattaactactatataatttcctttttttatatctttaaccagtgccccgggggcaccggttagcatttc 29683197  T
Q  110 c 110  Q
    |    
T  29683196 c 29683196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 39497407 - 39497331
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctc 87  Q
    ||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||| |||||| || |||||    
T  39497407 ttattataaattaattatataattttaatgcattaactactatataattttctttttcatatccttaatcaatgctc 39497331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 12307017 - 12306919
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| || | ||||| || || || ||||||||||| | |||||||    
T  12307017 ttattataaattaattacacaatttcaatgtattaactac-atataattttctttttcgtatcattaactagagccccagaggcaccggttagcatttcc 12306919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 11 - 86
Target Start/End: Complemental strand, 26228293 - 26228218
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgct 86  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||| ||  ||||||||||||||    
T  26228293 ttattataaattaattacataatttcaatgcattaactactatataatttcattttttatctccttaaccagtgct 26228218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 81
Target Start/End: Original strand, 8473000 - 8473070
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaacca 81  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||| |||||| ||| |||||||||    
T  8473000 ttattataaattaattacacaattttaatgcattaactattatataatttccttttttatatccttaacca 8473070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 11 - 84
Target Start/End: Complemental strand, 43286822 - 43286749
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtg 84  Q
    ||||||||||||||||||| ||||||||  ||||||||| |||||||||| |||||||||| ||||||||||||    
T  43286822 ttattataaattaattacataatttcaaaacattaactattatataatttcctttttcatatccttaaccagtg 43286749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 52431678 - 52431625
Alignment:
Q  14 ttataaattaattacacaatttcaatgcattaactactatataattttcttttt 67  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  52431678 ttataaattaattacacaatttcaatgcattaactactatataatttttttttt 52431625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 11 - 81
Target Start/End: Original strand, 23473550 - 23473620
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaacca 81  Q
    ||||||||||||||||| ||||||||||| |||||||| ||||||||| | |||||||||| |||||||||    
T  23473550 ttattataaattaattatacaatttcaatacattaactgctatataatctcctttttcatatccttaacca 23473620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 11 - 81
Target Start/End: Original strand, 45449330 - 45449400
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaacca 81  Q
    ||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||| ||| | |||||||    
T  45449330 ttattataatttaattacactattttaatgcattaactactatataattttcttttttatatctttaacca 45449400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 14 - 83
Target Start/End: Original strand, 35700739 - 35700808
Alignment:
Q  14 ttataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagt 83  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||| ||||||  || |||||||||||    
T  35700739 ttataaattaattacacaatttcaatgtattaactactgtataatttcctttttagtatccttaaccagt 35700808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 14 - 67
Target Start/End: Original strand, 37315356 - 37315409
Alignment:
Q  14 ttataaattaattacacaatttcaatgcattaactactatataattttcttttt 67  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  37315356 ttataaattaattacataatttcaatgcattaactactatataatttccttttt 37315409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 14 - 110
Target Start/End: Original strand, 39912368 - 39912464
Alignment:
Q  14 ttataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    |||||||||||| ||||||||||||||||||||||| |||||||||| | |||| ||| |||||| |||||| |||   || ||||| |||||||||    
T  39912368 ttataaattaatcacacaatttcaatgcattaactagtatataatttccctttttatatccttaatcagtgccccgagtgcgccggttaacatttcc 39912464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 41730408 - 41730306
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcatta---actactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatt 107  Q
    ||||||||||||||||| |||||||||||||||||   |||||||||||||||  |||||||||  ||||||| |||| || | ||||||||| || |||    
T  41730408 ttattataaattaattaaacaatttcaatgcattaattactactatataatttcttttttcatattcttaacccgtgcccctggggcaccggttaagatt 41730309  T
Q  108 tcc 110  Q
    |||    
T  41730308 tcc 41730306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 37503311 - 37503260
Alignment:
Q  14 ttataaattaattacacaatttcaatgcattaactactatataattttcttt 65  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  37503311 ttataaattaattacacaatttcaatgtattaactactatataatttccttt 37503260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 84
Target Start/End: Original strand, 3838866 - 3838936
Alignment:
Q  14 ttataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtg 84  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||| ||||||  ||  |||||||||||    
T  3838866 ttataaattaattacacaattttaatgcattaactattatataatttcctttttagtatgcttaaccagtg 3838936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 28481940 - 28481845
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||||||||||||||||||||| |||||||    |||| |||||||| |||||||||| |||||||||| || |  ||||||||||| | |||||||    
T  28481940 ttattataaattaattacacaattttaatgcat----tactgtataatttcctttttcatatccttaaccagggcccaagaggcaccggttagcatttcc 28481845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 100
Target Start/End: Original strand, 48383197 - 48383286
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggt 100  Q
    ||||||| |||||||||||  |||||||| ||||||||   |||||||||||||||||| | ||||||||||||| ||||  ||||||||    
T  48383197 ttattatcaattaattacattatttcaatacattaactttcatataattttctttttcacatccttaaccagtgccccgggagcaccggt 48383286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 33644423 - 33644498
Alignment:
Q  14 ttataaattaattacacaattt-caatgcattaactactatataattttctttttcatacccttaaccagtgctcc 88  Q
    |||| ||||||||||||||||| ||||||| ||| || ||||||||||||||||| ||| |||||||| |||||||    
T  33644423 ttatgaattaattacacaattttcaatgcaataattattatataattttcttttttatagccttaacctgtgctcc 33644498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 53
Target Start/End: Original strand, 19011057 - 19011095
Alignment:
Q  15 tataaattaattacacaatttcaatgcattaactactat 53  Q
    |||||||||||||||||||||||||||||||||||||||    
T  19011057 tataaattaattacacaatttcaatgcattaactactat 19011095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 90
Target Start/End: Original strand, 19011108 - 19011161
Alignment:
Q  37 aatgcattaactactatataattttctttttcatacccttaaccagtgctccgg 90  Q
    |||||||||||||||||||||||| |||||||||| |||||||| |||| ||||    
T  19011108 aatgcattaactactatataatttcctttttcatatccttaacccgtgccccgg 19011161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 85
Target Start/End: Original strand, 10976008 - 10976062
Alignment:
Q  31 aatttcaatgcattaactactatataattttctttttcatacccttaaccagtgc 85  Q
    ||||| |||||||||||||||||||||| | |||||||||| ||||||| |||||    
T  10976008 aattttaatgcattaactactatataatctcctttttcatatccttaacaagtgc 10976062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 67
Target Start/End: Complemental strand, 49867524 - 49867474
Alignment:
Q  17 taaattaattacacaatttcaatgcattaactactatataattttcttttt 67  Q
    ||||||||||||||||||||||  |||||| |||||||||| |||||||||    
T  49867524 taaattaattacacaatttcaaaacattaattactatataactttcttttt 49867474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 11 - 81
Target Start/End: Complemental strand, 52749702 - 52749632
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaacca 81  Q
    ||||| |||||| | || ||||||||||| ||||||||| |||||||||| |||||||||| | |||||||    
T  52749702 ttattgtaaatttagtatacaatttcaatacattaactattatataatttcctttttcatatctttaacca 52749632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 39081898 - 39081827
Alignment:
Q  14 ttataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgc 85  Q
    |||||||||||||| | ||||||||| ||||||||| ||||||||||  |||||  ||  ||||||||||||    
T  39081898 ttataaattaattataaaatttcaatacattaactagtatataatttcatttttagtatgcttaaccagtgc 39081827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 67
Target Start/End: Original strand, 16590304 - 16590356
Alignment:
Q  14 ttataaattaattacacaatttcaatgcattaactactatataattttcttttt 67  Q
    |||||||||||||||||||||| ||| |||||| |  |||||||||||||||||    
T  16590304 ttataaattaattacacaattt-aatacattaattgttatataattttcttttt 16590356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 85
Target Start/End: Complemental strand, 30217862 - 30217786
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataatt--ttctttttcatacccttaaccagtgc 85  Q
    ||||||||||||||||| | ||||| ||||||||||||||| | |||||   | ||||||||| ||||| |||||||    
T  30217862 ttattataaattaattaaataatttaaatgcattaactactctctaattccctttttttcatatccttagccagtgc 30217786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 28725999 - 28726091
Alignment:
Q  20 attaattacacaattt-caatgcattaactactatataattttctttttcat-acccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    |||||||| ||||||| ||||||| ||| ||  ||||||||| |||||| || | ||||||||||||| |||| ||||||||| | |||||||    
T  28725999 attaattaaacaattttcaatgcaataattaacatataatttccttttttattatccttaaccagtgccccgggggcaccggttagcatttcc 28726091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 30664255 - 30664339
Alignment:
Q  14 ttataaattaattacacaattt-caatgcattaactactatataattttctttttca-tacccttaaccagtgctccggaggcac 96  Q
    ||||| |||||||| ||||||| ||||||| ||| ||  |||||||||||||||| | || ||||||||| ||| ||||||||||    
T  30664255 ttatagattaattaaacaattttcaatgcaataattaacatataattttcttttttattatccttaaccaatgccccggaggcac 30664339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 88; Significance: 2e-42; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 168574 - 168467
Alignment:
Q  3 ttttcacattattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtca 102  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |    
T  168574 ttttgacattattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtgccccggaggcaccggtta 168475  T
Q  103 acatttcc 110  Q
     |||||||    
T  168474 gcatttcc 168467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 30675650 - 30675757
Alignment:
Q  3 ttttcacattattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtca 102  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||| |    
T  30675650 ttttgacattattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtgccccgggggcaccggtta 30675749  T
Q  103 acatttcc 110  Q
     |||||||    
T  30675750 gcatttcc 30675757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 21595954 - 21595848
Alignment:
Q  3 ttttcacattattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtca 102  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||| ||||||||| |    
T  21595954 ttttgacattattataaattaattacacaatttcaatgcattaactcctatataatttcctttttcatacccttaaccagtgc-ccgggggcaccggtta 21595856  T
Q  103 acatttcc 110  Q
     |||||||    
T  21595855 gcatttcc 21595848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 27988585 - 27988684
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||| |||||||||||||| | |||||||    
T  27988585 ttattataaattaattacacaatttcaatgcattaactattatataatttcctttttcatatccttaaccagtgccccggaggcaccggttagcatttcc 27988684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 28045887 - 28045986
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||| |||||||||||||| | |||||||    
T  28045887 ttattataaattaattacacaatttcaatgcattaactattatataatttcctttttcatatccttaaccagtgccccggaggcaccggttagcatttcc 28045986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 33357215 - 33357314
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||| || | |||||||    
T  33357215 ttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgctccgggggcaccagttagcatttcc 33357314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 11 - 98
Target Start/End: Original strand, 42035067 - 42035154
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccg 98  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||    
T  42035067 ttattataaattaattacacaatttcaatacattaactactatataatttcctttttcatatccttaaccagtgctccgggggcaccg 42035154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 11112739 - 11112640
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||  ||||| ||||| || | |||||||    
T  11112739 ttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgtcccggatgcaccagttagcatttcc 11112640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 12203962 - 12203856
Alignment:
Q  3 ttttcacattattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtca 102  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| || | |||| ||||||||| |    
T  12203962 ttttgacattattataaattaattacacaatttcaatgcattaactactatataatttcttttttcatacccttaaccggtac-ccgggggcaccggtta 12203864  T
Q  103 acatttcc 110  Q
     |||||||    
T  12203863 gcatttcc 12203856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 12448390 - 12448284
Alignment:
Q  3 ttttcacattattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtca 102  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| || | |||| ||||||||| |    
T  12448390 ttttgacattattataaattaattacacaatttcaatgcattaactactatataatttcttttttcatacccttaaccggtac-ccgggggcaccggtta 12448292  T
Q  103 acatttcc 110  Q
     |||||||    
T  12448291 gcatttcc 12448284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 16888630 - 16888728
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| |||| |||| ||||||||| | |||||||    
T  16888630 ttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaacctgtgc-ccgggggcaccggttagcatttcc 16888728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 11 - 100
Target Start/End: Complemental strand, 13643112 - 13643023
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggt 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| || ||||||||||||| |||| |||||||||    
T  13643112 ttattataaattaattacataatttcaatgcattaactactatataatttcctttttcgtatccttaaccagtgccccgggggcaccggt 13643023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 11 - 100
Target Start/End: Complemental strand, 13743537 - 13743448
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggt 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| || ||||||||||||| |||| |||||||||    
T  13743537 ttattataaattaattacataatttcaatgcattaactactatataatttcctttttcgtatccttaaccagtgccccgggggcaccggt 13743448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 29444226 - 29444323
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacattt 108  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| |||||| |||||| ||||  |||||||| |||||||    
T  29444226 ttattataaattaattacacaatttcaatgcgttaactactatataatttcctttttcatatccttaatcagtgccccgggagcaccggttaacattt 29444323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 11 - 100
Target Start/End: Complemental strand, 32114008 - 32113919
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggt 100  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| ||||||||| | |||||||| |||||||    
T  32114008 ttattataaattaattaaacaatttcaatgcattaactactatataatttcctttttcatatccttaaccaatactccggagacaccggt 32113919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 4537830 - 4537929
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||| || ||| ||| ||||||||||||| |||||||||||||| | |||||||    
T  4537830 ttattatcaattaattacataatttcaatgcattaactactatataatttcctattttatatccttaaccagtgccccggaggcaccggttagcatttcc 4537929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 3 - 90
Target Start/End: Complemental strand, 4648302 - 4648215
Alignment:
Q  3 ttttcacattattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccgg 90  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||| |||||| ||||    
T  4648302 ttttgacattattataaattaattacacaatttcaatgtattaactactatataatttcctttttcatatccttaatcagtgccccgg 4648215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 11 - 78
Target Start/End: Original strand, 7304604 - 7304671
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaa 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  7304604 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatatccttaa 7304671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 9063138 - 9063217
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccgg 90  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  9063138 ttattataaattaattgcacgatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgctccgg 9063217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 34228782 - 34228683
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||| || | ||||||||| | |||||||    
T  34228782 ttattatcaattaattacacaatttcaatgcattaattactatataatttcctttttcatatccttaaccagtgcccccggggcaccggttagcatttcc 34228683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 37373305 - 37373207
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||| ||||| ||||||||| | |||||||    
T  37373305 ttattatcaattaattacacaatttcaatgcattaactattatataatttcctttttcatatccttaaccagtg-tccgggggcaccggttagcatttcc 37373207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 43119317 - 43119218
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | |||| |||||| |||  ||||||||| | |||||||    
T  43119317 ttattataaattaattatacaatttcaatgcattaactactatataattttctttttcatatctttaatcagtgccccgagggcaccggttagcatttcc 43119218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 20831639 - 20831737
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttc 109  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||| ||||||||||||  |||| ||||||||| | ||||||    
T  20831639 ttattataaattaattatactatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgtcccgggggcaccggttagcatttc 20831737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 85
Target Start/End: Complemental strand, 40831377 - 40831303
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgc 85  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  40831377 ttattataaattaattatacaatttcaatgcattaactactatataattttctttttcatatctttaaccagtgc 40831303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 84
Target Start/End: Complemental strand, 36730544 - 36730471
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtg 84  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||    
T  36730544 ttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaactagtg 36730471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 11 - 83
Target Start/End: Original strand, 9537910 - 9537982
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagt 83  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||    
T  9537910 ttattataaattaattacacaattttaatgcattaactactatataatttcctttttcatatccttaaccagt 9537982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 2805346 - 2805445
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||||  ||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||  |||| ||||| ||| |||||||||    
T  2805346 ttattataggttaattacacaatttcaatgcattaactattatataatttcctttttcatatccttaaccagtgtcccgggggcactggttaacatttcc 2805445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 16394147 - 16394246
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||| |||||||||||  |||||||||||||||||| ||||||||||||||||||| | ||||||||||||| |||| ||||||||| | |||||||    
T  16394147 ttattatcaattaattacattatttcaatgcattaactattatataattttctttttcacatccttaaccagtgccccgggggcaccggttagcatttcc 16394246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 11 - 100
Target Start/End: Complemental strand, 10618118 - 10618029
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggt 100  Q
    ||||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||| |||||||| |||| |  |||||||||||    
T  10618118 ttattatcaattaattacacaatttaattgcattaactactatataattttctttttcatatccttaacctgtgccctagaggcaccggt 10618029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 11 - 79
Target Start/End: Original strand, 16890566 - 16890634
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaac 79  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  16890566 ttattatcaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaac 16890634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 9278312 - 9278213
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| | ||||| ||||  || |||||||| || | |||||||    
T  9278312 ttattataaattaattacacaatttcaatgcattaactattatataatttcctttttcatatctttaacgagtgtccctgaggcaccagttagcatttcc 9278213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 16785186 - 16785088
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||||||  ||||||||| ||||||||||||| | ||| |||||||| | |||||||    
T  16785186 ttattataaattaattacacaatttcaatacattaactgctatataatttcttttttcatatccttaaccagtgccctgga-gcaccggttagcatttcc 16785088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 12652707 - 12652631
Alignment:
Q  34 ttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||||||| | ||||||||| | |||||||    
T  12652707 ttcaatgcattaactactatataatttcctttttcatatccttaaccagtgctccaggggcaccggttagcatttcc 12652631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 34192875 - 34192815
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcata 71  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  34192875 ttattataaattaattacacaatttcaatgcattaactagtatataatttcctttttcata 34192815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 90
Target Start/End: Original strand, 9253996 - 9254066
Alignment:
Q  20 attaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccgg 90  Q
    ||||||||||||||||||||||||||||||||||| |||||  ||||||||| ||||||||||||| ||||    
T  9253996 attaattacacaatttcaatgcattaactactataaaatttcatttttcatatccttaaccagtgccccgg 9254066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 81
Target Start/End: Complemental strand, 10870452 - 10870382
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaacca 81  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||| | |||||||    
T  10870452 ttattataaattaattacacaatttcaatgtattaactattatataattttcttttttatatcattaacca 10870382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 85
Target Start/End: Complemental strand, 28626868 - 28626794
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgc 85  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||| | |||||||| ||||    
T  28626868 ttattataaattaatcacacaatttcaatacattaactactatataatttcctttttcacatccttaaccggtgc 28626794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 29235335 - 29235256
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccgg 90  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||  ||||| ||| |||||| || ||||||||    
T  29235335 ttattataaattaattacacaaatttaatgcattaactactatataatttctttttttatatccttaatcaatgctccgg 29235256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 14 - 67
Target Start/End: Original strand, 42433632 - 42433685
Alignment:
Q  14 ttataaattaattacacaatttcaatgcattaactactatataattttcttttt 67  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  42433632 ttataaattaattacacaatttcaatgcattaactattatataatttccttttt 42433685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 3930319 - 3930379
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcata 71  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||||||| || |||||||    
T  3930319 ttattatcaattaattacacaacttcaatgcattaactactatataatttcctctttcata 3930379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 22451881 - 22451834
Alignment:
Q  14 ttataaattaattacacaatttcaatgcattaactactatataatttt 61  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  22451881 ttataaattaattacacaatttcaatgcattaactgctatataatttt 22451834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 84
Target Start/End: Complemental strand, 17467703 - 17467630
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtg 84  Q
    ||||||| |||||||||||||||||||||||||||| ||||  ||||||| |||||||||| | ||||| ||||    
T  17467703 ttattatcaattaattacacaatttcaatgcattaattactgcataatttcctttttcatatcattaactagtg 17467630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 30933410 - 30933453
Alignment:
Q  14 ttataaattaattacacaatttcaatgcattaactactatataa 57  Q
    ||||||||||||||||||||||||||||||||| ||||||||||    
T  30933410 ttataaattaattacacaatttcaatgcattaattactatataa 30933453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 22956813 - 22956732
Alignment:
Q  3 ttttcacattattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgc 85  Q
    |||| |||||||||||||||||||||| ||||| |||| ||||||||| |||| | || |||||| |||| ||||||||||||    
T  22956813 ttttgacattattataaattaattacataattttaatgtattaactaccatatga-ttccttttttatactcttaaccagtgc 22956732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 67
Target Start/End: Original strand, 34890647 - 34890700
Alignment:
Q  14 ttataaattaattacacaatttcaatgcattaactactatataattttcttttt 67  Q
    |||| |||| ||||||||||||||||| | ||| ||||||||||||||||||||    
T  34890647 ttatgaattgattacacaatttcaatgtaataaatactatataattttcttttt 34890700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 4811656 - 4811602
Alignment:
Q  14 ttataaattaattacacaattt-caatgcattaactactatataattttcttttt 67  Q
    |||| ||||||||| ||||||| ||||||| ||| ||||||||||||||||||||    
T  4811656 ttatgaattaattatacaattttcaatgcaataattactatataattttcttttt 4811602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 67
Target Start/End: Original strand, 16196893 - 16196947
Alignment:
Q  14 ttataaattaattacacaa-tttcaatgcattaactactatataattttcttttt 67  Q
    ||||||||||||||||||| |||||||  | |||||| |||||||||||||||||    
T  16196893 ttataaattaattacacaattttcaatataataactattatataattttcttttt 16196947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 107
Target Start/End: Complemental strand, 17913617 - 17913543
Alignment:
Q  33 tttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatt 107  Q
    |||||||||| |||||||||||||||||  ||||| |   | |||||||||||||||||| |||| || ||||||    
T  17913617 tttcaatgcaataactactatataatttatttttttagtactttaaccagtgctccggagacaccagttaacatt 17913543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 67
Target Start/End: Original strand, 33124581 - 33124635
Alignment:
Q  14 ttataaattaattacacaattt-caatgcattaactactatataattttcttttt 67  Q
    ||||||||| |||||||||||| ||||||| |||||||||||||| || ||||||    
T  33124581 ttataaattgattacacaattttcaatgcaataactactatataacttccttttt 33124635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 110
Target Start/End: Original strand, 39751559 - 39751657
Alignment:
Q  14 ttataaattaattacacaatttc-aatgcattaactactatataattttctttttcat-acccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||| |||||||| |||||||  |||||| ||| || |||||||||||| |||| || | ||||||||||||| |||| ||||||||| | |||||||    
T  39751559 ttatagattaattaaacaatttttaatgcaataaataatatataattttcctttttattatccttaaccagtgccccgggggcaccggttagcatttcc 39751657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 24843356 - 24843393
Alignment:
Q  2 attttcacattattataaattaattacacaatttcaat 39  Q
    ||||| || |||||||||||||||||||||||||||||    
T  24843356 attttgactttattataaattaattacacaatttcaat 24843393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 48
Target Start/End: Complemental strand, 39406942 - 39406905
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaact 48  Q
    ||||||||||||||||||||||||| || |||||||||    
T  39406942 ttattataaattaattacacaattttaacgcattaact 39406905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 88; Significance: 2e-42; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 5239393 - 5239286
Alignment:
Q  3 ttttcacattattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtca 102  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |    
T  5239393 ttttgacattattataaattaattacacaatttcaatgcattaactactatataatttcctttttcataccattaaccagtgctccggaggcaccggtta 5239294  T
Q  103 acatttcc 110  Q
     |||||||    
T  5239293 gcatttcc 5239286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 34333392 - 34333285
Alignment:
Q  3 ttttcacattattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtca 102  Q
    |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| |||| ||||||||| |    
T  34333392 ttttgacattattataaattaattacacaatttcaatgcattaattactatataatttcctttttcatacccttaaccagtgccccgggggcaccggtta 34333293  T
Q  103 acatttcc 110  Q
     |||||||    
T  34333292 gcatttcc 34333285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 24438585 - 24438478
Alignment:
Q  3 ttttcacattattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtca 102  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||| ||||| |||| ||||||||| |    
T  24438585 ttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaactagtgccccgggggcaccggtta 24438486  T
Q  103 acatttcc 110  Q
     |||||||    
T  24438485 gcatttcc 24438478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 47657080 - 47656981
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| || || |||||||| | |||||||    
T  47657080 ttattataaattaattacacaatttcaatgcattaattactatataattttctttttcatatccttaaccagtgcccccgaagcaccggttagcatttcc 47656981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 29993564 - 29993672
Alignment:
Q  2 attttcacattattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtc 101  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| |||| |||| |||||| ||     
T  29993564 attttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccggtgccccgggggcacccgtt 29993663  T
Q  102 aacatttcc 110  Q
    | |||||||    
T  29993664 agcatttcc 29993672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 8754671 - 8754770
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||   ||||||||| | |||||||    
T  8754671 ttattataaattaattacacaatttcaatgcattaactactatataatttcatttttcatatccttaaccagtgctcccagggcaccggttagcatttcc 8754770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 12218522 - 12218621
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||| ||||||| |||| ||||||||| | |||||||    
T  12218522 ttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatacttatccagtgccccgggggcaccggttagcatttcc 12218621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 30810755 - 30810676
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccgg 90  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||    
T  30810755 ttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgccccgg 30810676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 34606361 - 34606262
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||| ||||||||||| || | |||||||    
T  34606361 ttattataaattaatttcacaatttcaatgcattaattactatataatttcctttttcatatccttaaccagtgccccggaggcaccagttagcatttcc 34606262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 24798489 - 24798587
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||| ||||| |||| ||||||||| | |||||||    
T  24798489 ttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatcctcaacaagtgc-ccgggggcaccggttagcatttcc 24798587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 28588009 - 28587911
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||| |||||||||| |||||||||||| ||||| ||||||||| | |||||||    
T  28588009 ttattataaattaattacacaatttcaatacattgactactatataatttcctttttcatatccttaaccagtg-tccgggggcaccggttagcatttcc 28587911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 3 - 82
Target Start/End: Complemental strand, 45045878 - 45045799
Alignment:
Q  3 ttttcacattattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccag 82  Q
    |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||    
T  45045878 ttttgacattattataaattaattacacaatttcaatgcattaattactatataatttcatttttcatacccttaaccag 45045799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 23363253 - 23363349
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacattt 108  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| || ||||||| |||||||||| | ||||||| |||||||    
T  23363253 ttattataaattaattacacaatttcaatgcattaactactatacaatttcctttttcttatccttaacgagtgctccgg-gacaccggttaacattt 23363349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 11 - 83
Target Start/End: Original strand, 11686410 - 11686482
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagt 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||    
T  11686410 ttattataaattaattacacaatttcaatgcattaactactatataatttccttttttatatccttaaccagt 11686482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 18486061 - 18485962
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||  ||| ||||||||||||| |||| ||||||||| | |||||||    
T  18486061 ttattataaattaattacacaatttcaatacattaattactatataatttccttttcaatatccttaaccagtgccccgggggcaccggttagcatttcc 18485962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 27456199 - 27456297
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||| |||| ||||||||||||| |||| |||||| || | |||||||    
T  27456199 ttattataaattaattacacaatttcaatgcattaactactatataatttctttttccatatccttaaccagtgc-ccgggggcaccagttagcatttcc 27456297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 43594122 - 43594221
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||| ||| |||||||||||| ||||| | ||||||| | |||||||    
T  43594122 ttattataaattaattatacaatttcaatgcattaactattatataatttccttttttatatccttaaccagtgttccggggacaccggttagcatttcc 43594221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 15 - 80
Target Start/End: Original strand, 34546404 - 34546469
Alignment:
Q  15 tataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaacc 80  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  34546404 tataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaacc 34546469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 1737080 - 1736981
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||| |||||||||||| |||||||||||||||||| ||||||||||  ||||||||| ||||||||||||| || || |||||||| | |||||||    
T  1737080 ttattatcaattaattacactatttcaatgcattaactattatataatttcatttttcatatccttaaccagtgccccagaagcaccggttagcatttcc 1736981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 4628666 - 4628567
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||||| |||||||||| |||||||| |||| || | |||| |||| | |||||||    
T  4628666 ttattataaattaattaaacaatttcaatgtattaactactatataatttcctttttcatatccttaaccggtgccccaggggcatcggttagcatttcc 4628567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 5729446 - 5729347
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||| |||||||||||  |||||||| ||||||||| |||||||||| |||||||||| ||||||||||||||||||   ||||||| |||||||||    
T  5729446 ttattatcaattaattacattatttcaatacattaactattatataatttcctttttcatatccttaaccagtgctccgggaacaccggttaacatttcc 5729347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 37631628 - 37631727
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||||||||||||||| ||||| |||||||||| || |||||||||| |||||| ||| |||||||| |||| ||||| |||||||| |||||||||    
T  37631628 ttattataaattaattacataattttaatgcattaattattatataatttccttttttatatccttaacccgtgccccggaagcaccggttaacatttcc 37631727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 42044371 - 42044453
Alignment:
Q  3 ttttcacattattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgc 85  Q
    |||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||  ||||||||||| |||||| ||||    
T  42044371 ttttgacattattataaattaattacacaatttcaatctattaactactatataatttcttttttcatacctttaaccggtgc 42044453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 84
Target Start/End: Original strand, 525161 - 525234
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtg 84  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||| |||||||||||||| | ||||||||||    
T  525161 ttattataaattaattatacaatttcaatgcattaactactgtatacttttctttttcatatctttaaccagtg 525234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 11 - 83
Target Start/End: Complemental strand, 47839592 - 47839520
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagt 83  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||| || |||||||||| |||||||||||    
T  47839592 ttattataaattaattacacaatttcaatgtattaactattatataaattcctttttcatatccttaaccagt 47839520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 7689286 - 7689385
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    |||||||||||||||||||||||||||||||||||| |||| || ||||| |||||| ||| |||||| |||||  || ||| ||||||| |||||||||    
T  7689286 ttattataaattaattacacaatttcaatgcattaattactgtaaaatttccttttttatatccttaatcagtgtcccagagacaccggttaacatttcc 7689385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 47083155 - 47083076
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccgg 90  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||||||||  ||||||||| |||||||| ||| |||||    
T  47083155 ttattatcaattaattacacaatttcaatacattaactactatataatttcttttttcatatccttaaccggtgttccgg 47083076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 11 - 84
Target Start/End: Complemental strand, 33636552 - 33636479
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtg 84  Q
    |||||||||||||||||||||||||||||| ||||| || |||||||||||||||||||||  |||||| ||||    
T  33636552 ttattataaattaattacacaatttcaatgaattaattattatataattttctttttcatattcttaactagtg 33636479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 11 - 60
Target Start/End: Original strand, 37674190 - 37674239
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattt 60  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37674190 ttattataaattaattacacaatttcaatgcattaactactatataattt 37674239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 18117243 - 18117183
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcata 71  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||||    
T  18117243 ttattataaattaattacacaatttcaatacattaactactatataatttcctctttcata 18117183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 11 - 81
Target Start/End: Original strand, 13064963 - 13065033
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaacca 81  Q
    |||||||||||||||||||||| |||||| |||||| || |||||||||| |||||||||| |||||||||    
T  13064963 ttattataaattaattacacaaattcaatacattaaatattatataatttcctttttcatatccttaacca 13065033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 37 - 110
Target Start/End: Original strand, 23357819 - 23357892
Alignment:
Q  37 aatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    |||||||||||||||||| |||||||||||||||| ||||||| ||| |||| |||| |||||| |||||||||    
T  23357819 aatgcattaactactatacaattttctttttcatatccttaacgagtactccagaggaaccggttaacatttcc 23357892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 22739920 - 22739868
Alignment:
Q  14 ttataaattaattacacaatttcaatgcattaactactatataattttctttt 66  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  22739920 ttataaattaattacacaatttcaatgcattaactactatatactttcctttt 22739868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 84
Target Start/End: Complemental strand, 4087720 - 4087650
Alignment:
Q  14 ttataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtg 84  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||| ||||||  ||  |||||||||||    
T  4087720 ttataaattaatcacactatttcaatgcattaactactatataatttcctttttagtatgcttaaccagtg 4087650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 80
Target Start/End: Original strand, 18220527 - 18220593
Alignment:
Q  14 ttataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaacc 80  Q
    |||||||||||||||||||||| ||| |||||| ||||||||||||||||||||  || ||||||||    
T  18220527 ttataaattaattacacaattttaatacattaattactatataattttctttttagtatccttaacc 18220593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 46716738 - 46716660
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccg 89  Q
    ||||||||||||||||||| ||||||| |||||||| || |||||||||| |||||| ||| | ||||||| |||||||    
T  46716738 ttattataaattaattacataatttcagtgcattaagtattatataatttccttttttatatctttaaccaatgctccg 46716660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 100
Target Start/End: Complemental strand, 28262126 - 28262042
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggt 100  Q
    ||||||| ||||||||||| |||||||||     |||||||||||||||| |||||||||| |||||||| |||  ||||||||||||||    
T  28262126 ttattatcaattaattacataatttcaat-----aactactatataatttcctttttcatatccttaaccggtgacccggaggcaccggt 28262042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 4100612 - 4100684
Alignment:
Q  13 attataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgc 85  Q
    ||||||||||||| ||| ||||| ||| |||||| ||||||||||||| |||||||||| |||||||| ||||    
T  4100612 attataaattaataacataattttaatacattaattactatataatttcctttttcatatccttaaccggtgc 4100684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 16 - 67
Target Start/End: Original strand, 18470030 - 18470081
Alignment:
Q  16 ataaattaattacacaatttcaatgcattaactactatataattttcttttt 67  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||| ||||||    
T  18470030 ataaattaattacacaatttcaatgtattaactgctatataatttccttttt 18470081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 80
Target Start/End: Complemental strand, 3021988 - 3021922
Alignment:
Q  14 ttataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaacc 80  Q
    |||||||||||||| |||||||||||| |||||||| |||||||||| |||||| |||  |||||||    
T  3021988 ttataaattaattatacaatttcaatgtattaactagtatataatttcctttttaatatgcttaacc 3021922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 67
Target Start/End: Original strand, 18220759 - 18220812
Alignment:
Q  14 ttataaattaattacacaatttcaatgcattaactactatataattttcttttt 67  Q
    ||||||||||||||||||||||| || |||||| ||||||||||||| ||||||    
T  18220759 ttataaattaattacacaatttctatacattaattactatataatttccttttt 18220812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 83
Target Start/End: Complemental strand, 36437474 - 36437405
Alignment:
Q  14 ttataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagt 83  Q
    |||||||||||||| |||||||||||| |||| |||||||||||||  ||||||  || |||||||||||    
T  36437474 ttataaattaattaaacaatttcaatgaattacctactatataattacctttttagtatccttaaccagt 36437405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 11 - 81
Target Start/End: Original strand, 29835790 - 29835860
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaacca 81  Q
    |||||| ||||||||||| |||||| ||| ||||||||| ||||||| || |||||||||| | |||||||    
T  29835790 ttattacaaattaattacgcaattttaatacattaactagtatataacttcctttttcatatctttaacca 29835860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 18220624 - 18220673
Alignment:
Q  18 aaattaattacacaatttcaatgcattaactactatataattttcttttt 67  Q
    |||||||||||||||||||||| || ||| ||||||||||||| ||||||    
T  18220624 aaattaattacacaatttcaatacagtaattactatataatttccttttt 18220673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 49
Target Start/End: Complemental strand, 13556509 - 13556474
Alignment:
Q  14 ttataaattaattacacaatttcaatgcattaacta 49  Q
    ||||||||||||||||||||||||||||||| ||||    
T  13556509 ttataaattaattacacaatttcaatgcattgacta 13556474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 20116975 - 20116941
Alignment:
Q  26 tacacaatttcaatgcattaactactatataattt 60  Q
    ||||||||||||||||||||| |||||||||||||    
T  20116975 tacacaatttcaatgcattaattactatataattt 20116941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 96
Target Start/End: Complemental strand, 22973667 - 22973613
Alignment:
Q  42 attaactactatataattttctttttcatacccttaaccagtgctccggaggcac 96  Q
    |||||||||||||||||||  ||||| ||| | ||||||||||| ||||||||||    
T  22973667 attaactactatataatttctttttttatatcattaaccagtgccccggaggcac 22973613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 38022580 - 38022632
Alignment:
Q  14 ttataaattaattacacaattt-caatgcattaactactatataattttcttt 65  Q
    ||||| |||||||| ||||||| |||| || ||||||||||||||||||||||    
T  38022580 ttatagattaattatacaattttcaatacaataactactatataattttcttt 38022632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 88; Significance: 2e-42; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 43944615 - 43944508
Alignment:
Q  3 ttttcacattattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtca 102  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |    
T  43944615 ttttgacattattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtgccccggaggcaccggtta 43944516  T
Q  103 acatttcc 110  Q
     |||||||    
T  43944515 gcatttcc 43944508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 789608 - 789715
Alignment:
Q  3 ttttcacattattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtca 102  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| |||| ||||||||| |    
T  789608 ttttgacattattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatacccttaacccgtgccccgggggcaccggtta 789707  T
Q  103 acatttcc 110  Q
     |||||||    
T  789708 gcatttcc 789715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 4089250 - 4089143
Alignment:
Q  3 ttttcacattattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtca 102  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || | ||||||||| |    
T  4089250 ttttgacattattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaatcagtgccccaggggcaccggtta 4089151  T
Q  103 acatttcc 110  Q
     |||||||    
T  4089150 gcatttcc 4089143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 15186351 - 15186244
Alignment:
Q  3 ttttcacattattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtca 102  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||| |    
T  15186351 ttttgacattattataaattaattacacaatttcaatggattaactactatataatttcctttttcatacccttaaccagtgccccgggggcaccggtta 15186252  T
Q  103 acatttcc 110  Q
     |||||||    
T  15186251 gcatttcc 15186244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 4268900 - 4269007
Alignment:
Q  3 ttttcacattattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtca 102  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||||||| |||| ||||||||| |    
T  4268900 ttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgccccgggggcaccggtta 4268999  T
Q  103 acatttcc 110  Q
     |||||||    
T  4269000 gcatttcc 4269007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 16536156 - 16536049
Alignment:
Q  3 ttttcacattattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtca 102  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||| |||| ||||||||| |    
T  16536156 ttttgacattattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatacccttaatccgtgccccgggggcaccggtta 16536057  T
Q  103 acatttcc 110  Q
     |||||||    
T  16536056 gcatttcc 16536049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 18067957 - 18068064
Alignment:
Q  3 ttttcacattattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtca 102  Q
    |||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||| |    
T  18067957 ttttgacattatgataaattaattacacaattttaatgcattaactactatataatttcctttttcatacccttaaccagtgccccgggggcaccggtta 18068056  T
Q  103 acatttcc 110  Q
     |||||||    
T  18068057 gcatttcc 18068064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 3 - 90
Target Start/End: Complemental strand, 7769046 - 7768959
Alignment:
Q  3 ttttcacattattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccgg 90  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  7769046 ttttaacattattataaattaattacacaatttcaatacattaactactatataatttcctttttcatacccttaaccagtgccccgg 7768959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 43202461 - 43202568
Alignment:
Q  3 ttttcacattattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtca 102  Q
    |||| |||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||| ||||| |||| ||||||||| |    
T  43202461 ttttgacattattataaattaattacacaattttaatgcattaattactatataatttcctttttcatacccttaactagtgccccgggggcaccggtta 43202560  T
Q  103 acatttcc 110  Q
     |||||||    
T  43202561 gcatttcc 43202568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 32202566 - 32202665
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||| |||| |||| | ||||||| |||||||||    
T  32202566 ttattataaattaattacacaatttcaatgcattaactactatataatttccttttttatatccttaacccgtgccccggggacaccggttaacatttcc 32202665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 32217145 - 32217046
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||| |||| |||||| || | |||||||    
T  32217145 ttattataaattaattacacaatttcaatgcattaactactatataatttccttttttatatccttaaccagtgccccgggggcaccagttagcatttcc 32217046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 37988043 - 37987937
Alignment:
Q  3 ttttcacattattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtca 102  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| | | | ||| |||||||| |    
T  37988043 ttttaacattattataaattaattacacaatttcaatacattaactactatataatttcctttttcatacccttaaccattaccctgga-gcaccggtta 37987945  T
Q  103 acatttcc 110  Q
    ||||||||    
T  37987944 acatttcc 37987937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 42898832 - 42898931
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||| | ||| |||||| | |||||||||    
T  42898832 ttattataaattaattacacaatttcaatgcattaactactatataatttccttttttatatccttaaccagtgccctggaagcaccgattaacatttcc 42898931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 54897408 - 54897309
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||| |||| ||||||||| | |||||||    
T  54897408 ttattataaattaattatacaatttcaatgcattaactactatataatttcctttctcatatccttaaccagtgccccgggggcaccggttagcatttcc 54897309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 55882783 - 55882685
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||| ||||| |||||| ||||||| | |||||||    
T  55882783 ttattataaattaattacacaatttcaatgcattaattactatataatttt-tttttcatatccttaacgagtgccccggagacaccggttagcatttcc 55882685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 85
Target Start/End: Complemental strand, 28755720 - 28755646
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgc 85  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  28755720 ttattatcaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgc 28755646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 4220295 - 4220196
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||| || | ||| ||||| |||| | |||||||    
T  4220295 ttattataaattaattacacaatttcaatacattaactactatataatttcctttttcatatccttaacccgtaccccgaaggcatcggttatcatttcc 4220196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 24679728 - 24679826
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||| ||||||||||||| || ||| ||||||| | |||||||    
T  24679728 ttattataaattaattacacaatttcaatacattaactactatataatttcttttttcatatccttaaccagtgc-cccgagacaccggttagcatttcc 24679826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 29591289 - 29591190
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||  |||||||||||| |||| |||||| || | |||||||    
T  29591289 ttattataaattaagtacacaatttcaatgcattaactactatataatttccttattcatattcttaaccagtgccccgggggcaccagttagcatttcc 29591190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 33108759 - 33108857
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||| ||||||||| || |||||||||||||||||| |||||||||| ||||||||||  |||||||||||| |||||||||||||| |||||||||    
T  33108759 ttattatcaattaattatactatttcaatgcattaactattatataatttcctttttcata-tcttaaccagtgccccggaggcaccggttaacatttcc 33108857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 11 - 98
Target Start/End: Complemental strand, 39844007 - 39843920
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccg 98  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||| ||||||||| ||||| | ||||||||    
T  39844007 ttattataaattaattacataatttcaatgcattaactactatataatttcatttttcatatccttaaccaatgctctgaaggcaccg 39843920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 47231958 - 47232057
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||| |||||||||||  |||||||||||||||||| |||||||||| |||||||| | |||||||||||||||||| ||||||||| | |||||||    
T  47231958 ttattatcaattaattacattatttcaatgcattaactattatataatttcctttttcacatccttaaccagtgctccgggggcaccggttagcatttcc 47232057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 50619186 - 50619107
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccgg 90  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||| ||||    
T  50619186 ttattataaattaagtacacaatttcaatgcattaactactatataattttctttttcatattcttaatcagtgccccgg 50619107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 85
Target Start/End: Complemental strand, 6164193 - 6164120
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgc 85  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||    
T  6164193 ttattataaattaattacacaatttcaatgcattaactactatataattttc-ttttgatatccttaaccagtgc 6164120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 85
Target Start/End: Original strand, 54655962 - 54656036
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgc 85  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||| |||||||||||||    
T  54655962 ttattataaattaattacacaatttcaatacattaactactatataatttccttttttatatccttaaccagtgc 54656036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 85
Target Start/End: Original strand, 54945864 - 54945938
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgc 85  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||| |||||||||||||    
T  54945864 ttattataaattaattacacaatttcaatacattaactgctatataatttcctttttcatatccttaaccagtgc 54945938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 11 - 84
Target Start/End: Original strand, 31680549 - 31680622
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtg 84  Q
    ||||||||||||||||| ||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||    
T  31680549 ttattataaattaattatacaatttcaatgcattaactattatgtaactttctttttcatacccttaaccagtg 31680622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 11 - 83
Target Start/End: Original strand, 19503191 - 19503263
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagt 83  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||||| |||||||||| |||||||||||    
T  19503191 ttattataaattaattacacaatttcaatgtattaactagtatataatttcctttttcatatccttaaccagt 19503263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 36395199 - 36395139
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcata 71  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  36395199 ttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcata 36395139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 52533871 - 52533970
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||| |||||||||  |||||||| |||||||||||||||||||||| ||||||||||  |||||||||||  | |||||||||||| |||||||||    
T  52533871 ttattatcaattaattattcaatttcagtgcattaactactatataatttcctttttcatattcttaaccagtgtcctggaggcaccggttaacatttcc 52533970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 11 - 85
Target Start/End: Complemental strand, 49915259 - 49915185
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgc 85  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||| |||||| ||||||    
T  49915259 ttattataaattaattacacaatttcaatacattaattactatataaatttctttttcatatccttaatcagtgc 49915185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 84
Target Start/End: Complemental strand, 50603335 - 50603254
Alignment:
Q  3 ttttcacattattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtg 84  Q
    |||| ||||||||||||||||||||||||||||||||||||||| || |||| ||||| ||||| || ||||||||||||||    
T  50603335 ttttgacattattataaattaattacacaatttcaatgcattaattattatacaatttccttttccacacccttaaccagtg 50603254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 11 - 83
Target Start/End: Complemental strand, 12356344 - 12356272
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagt 83  Q
    ||||||||||||||||| | |||||||||| ||||||||||||||||||| |||||||||| |||||||||||    
T  12356344 ttattataaattaattatataatttcaatgtattaactactatataatttcctttttcatatccttaaccagt 12356272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 46688291 - 46688395
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttc-----tttttcatacccttaaccagtgctccggaggcaccggtcaaca 105  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||     ||||||||| |||||||||||||  ||| |||||| || | ||    
T  46688291 ttattataaattaattacacaatttcaatgcattaactactgtataattttctttaatttttcatatccttaaccagtgcctcgggggcaccagttagca 46688390  T
Q  106 tttcc 110  Q
    |||||    
T  46688391 tttcc 46688395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 3783587 - 3783686
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||| ||||||||| ||||||| ||||||||||||||||||||||||  |||||||||   |||||| |||| |||||||||||||| | |||||||    
T  3783587 ttattatcaattaattaaacaattttaatgcattaactactatataatttcatttttcatatgtttaaccggtgccccggaggcaccggttagcatttcc 3783686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 15 - 85
Target Start/End: Complemental strand, 50167685 - 50167617
Alignment:
Q  15 tataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgc 85  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| | |||||||||||    
T  50167685 tataaattaattacacaatttcaatgcattaactac--tataattttctttttcatatctttaaccagtgc 50167617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 54054648 - 54054549
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||| |||||||||||| |||||||||||||||||| ||||||||||  ||||||||| |||||||| |||| || | ||||||||| | |||||||    
T  54054648 ttattatcaattaattacactatttcaatgcattaactattatataatttcttttttcatatccttaaccggtgcccccggggcaccggttagcatttcc 54054549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 11 - 60
Target Start/End: Original strand, 30387220 - 30387269
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattt 60  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30387220 ttattataaattaattacacaatttcaatgcattaactactatataattt 30387269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 42815209 - 42815132
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctcc 88  Q
    ||||||||||||||||||| ||||||||| |||||||||  ||||||||| |||||||||| ||||||||||| ||||    
T  42815209 ttattataaattaattacataatttcaatacattaactatgatataatttcctttttcatatccttaaccagtactcc 42815132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 11 - 84
Target Start/End: Original strand, 53655964 - 53656037
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtg 84  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||||  ||||||||| ||||||| ||||    
T  53655964 ttattataaattaattacacaatttcaatacattaactattatataatttcttttttcatatccttaacaagtg 53656037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 30154249 - 30154309
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcata 71  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||||||    
T  30154249 ttattataaattaattacataatttcaatacattaactactatataatttcctttttcata 30154309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 41265556 - 41265503
Alignment:
Q  14 ttataaattaattacacaatttcaatgcattaactactatataattttcttttt 67  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  41265556 ttataaattaattacacaatttcactgcattaactactatataattttcatttt 41265503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 46149039 - 46148979
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcata 71  Q
    |||||||||||||||||||||||||||||| ||||| || |||||||||| ||||||||||    
T  46149039 ttattataaattaattacacaatttcaatgtattaattattatataatttcctttttcata 46148979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 5091696 - 5091775
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccgg 90  Q
    ||||||||||||||||||||||||| |||  ||||| || ||||||||||| |||||||||  |||||||||||| ||||    
T  5091696 ttattataaattaattacacaattttaatatattaattattatataattttatttttcatattcttaaccagtgccccgg 5091775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 60
Target Start/End: Complemental strand, 53268817 - 53268771
Alignment:
Q  14 ttataaattaattacacaatttcaatgcattaactactatataattt 60  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||    
T  53268817 ttataaattaattacacaattttaatgcattaactaatatataattt 53268771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 80
Target Start/End: Complemental strand, 52697151 - 52697083
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaacc 80  Q
    ||||||||||||| ||| | ||||| |||| |||||||||||||||||||| ||||||||| ||||||||    
T  52697151 ttattataaatta-ttatataattttaatgtattaactactatataattttgtttttcatatccttaacc 52697083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 31517265 - 31517217
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataatt 59  Q
    ||||||| |||||||||||| |||||||||||||||||| |||||||||    
T  31517265 ttattatcaattaattacactatttcaatgcattaactattatataatt 31517217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 85
Target Start/End: Original strand, 1432653 - 1432702
Alignment:
Q  36 caatgcattaactactatataattttctttttcatacccttaaccagtgc 85  Q
    ||||| |||||||| |||||||||| |||||||||| |||||||||||||    
T  1432653 caatgtattaactattatataatttcctttttcatatccttaaccagtgc 1432702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 47
Target Start/End: Original strand, 39877335 - 39877371
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaac 47  Q
    ||||||||||||||||||||||||||||| |||||||    
T  39877335 ttattataaattaattacacaatttcaatacattaac 39877371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 110
Target Start/End: Original strand, 39877554 - 39877611
Alignment:
Q  52 atataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    |||||||||||||||||||| | ||||||||||| |||| || |||||| |||||||||    
T  39877554 atataattttctttttcatatcgttaaccagtgc-ccgggggtaccggttaacatttcc 39877611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 16820952 - 16820912
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactact 51  Q
    ||||||||| ||||||||| |||||||||||||||| ||||    
T  16820952 ttattataagttaattacagaatttcaatgcattaattact 16820912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 84; Significance: 5e-40; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 392204 - 392097
Alignment:
Q  3 ttttcacattattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtca 102  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||| |    
T  392204 ttttgacattattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtgccccgggggcaccggtta 392105  T
Q  103 acatttcc 110  Q
     |||||||    
T  392104 gcatttcc 392097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 125 - 214
Target Start/End: Original strand, 32590128 - 32590217
Alignment:
Q  125 atattactttgtctcaacaataggtatataaaaattatttcatgcaccttagctaatgcccaaatgctgaaatgggcacgatattcctct 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  32590128 atattactttgtctcaacaataggtatataaaaattatttcatgcaccttagctaatgcccagatgctgaaatgggaacgatattcctct 32590217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 125 - 214
Target Start/End: Original strand, 32600576 - 32600665
Alignment:
Q  125 atattactttgtctcaacaataggtatataaaaattatttcatgcaccttagctaatgcccaaatgctgaaatgggcacgatattcctct 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  32600576 atattactttgtctcaacaataggtatataaaaattatttcatgcaccttagctaatgcccagatgctgaaatgggaacgatattcctct 32600665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 3515874 - 3515767
Alignment:
Q  3 ttttcacattattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtca 102  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | || ||||||||| |    
T  3515874 ttttgacattattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtgccctgggggcaccggtta 3515775  T
Q  103 acatttcc 110  Q
     |||||||    
T  3515774 gcatttcc 3515767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 4215803 - 4215696
Alignment:
Q  3 ttttcacattattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtca 102  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||| |||| ||||||||| |    
T  4215803 ttttgacattattataaattaattacacaatttcaatgcattaactattatataatttcctttttcatactcttaaccagtgccccgggggcaccggtta 4215704  T
Q  103 acatttcc 110  Q
    ||||||||    
T  4215703 acatttcc 4215696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 27433600 - 27433493
Alignment:
Q  3 ttttcacattattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtca 102  Q
    |||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||| |    
T  27433600 ttttgacattatgataaattaattacacaattttaatgcattaactactatataatttcctttttcatacccttaaccagtgccccgggggcaccggtta 27433501  T
Q  103 acatttcc 110  Q
     |||||||    
T  27433500 gcatttcc 27433493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 8 - 110
Target Start/End: Complemental strand, 12525822 - 12525720
Alignment:
Q  8 acattattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatt 107  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||||| | |||||||||||||| | ||||    
T  12525822 acattattataaattaattacacattttcaatgtattaactactatataatttcctttttcatacccttaaccagtaccccggaggcaccggttagcatt 12525723  T
Q  108 tcc 110  Q
    |||    
T  12525722 tcc 12525720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 7851245 - 7851344
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||||| | || ||||||||| | |||||||    
T  7851245 ttattataaattaattacacaattttaatgcattaattactatataattttctttttcatatccttaaccagtgccctgggggcaccggttagcatttcc 7851344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 12145203 - 12145302
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||| | || ||||||||| | |||||||    
T  12145203 ttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaacaagtgcactgggggcaccggttagcatttcc 12145302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 20898048 - 20897949
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| | || ||||||||| | |||||||    
T  20898048 ttattatcaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgccctgggggcaccggttagcatttcc 20897949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 23402238 - 23402139
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||| ||||||||||| || | |||||||    
T  23402238 ttattataaattaatttcacaatttcaatgcattaattactatataatttcctttttcatatccttaaccagtgccccggaggcaccagttagcatttcc 23402139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 32929594 - 32929693
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||||| ||| |||| ||||||||| | |||||||    
T  32929594 ttattataaattaattacacaatttcaatgcattaattaatatataatttcctttttcatacccttaaccattgccccgggggcaccggttagcatttcc 32929693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 2350752 - 2350654
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttc 109  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||| ||||  |||||||| | ||||||    
T  2350752 ttattataaattaattacacaatttcaatacattaactactatataatttcctttttcatatccttaaccagtgccccgggagcaccggttagcatttc 2350654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 12 - 96
Target Start/End: Complemental strand, 13529554 - 13529470
Alignment:
Q  12 tattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcac 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||| ||| ||||||    
T  13529554 tattataaattaattacacaatttcaatgcattaactactatataatttcctttttcacatccttaaccagtgccccgaaggcac 13529470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 18276701 - 18276799
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||||||||||| || | |||||| || |||||||||    
T  18276701 ttattataaattaattacacaaattcaatgcattaactactatataatttcctttttcatatccttaaccagtgc-ccaggggcaccagttaacatttcc 18276799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 21878433 - 21878532
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||||| |||||||| |||| | |||||||||||| | |||||||    
T  21878433 ttattataaattaattaaataatttcaatgcattaactactatataatttcctttttcatatccttaacccgtgcccgggaggcaccggttagcatttcc 21878532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 23629662 - 23629760
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||| |||| |||| |||| |||||||||    
T  23629662 ttattataaagtaattacacaatttcaatacattaactactatataattttctttttcatatccttaatcagtgccccgg-ggcatcggttaacatttcc 23629760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 29451201 - 29451299
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| |||| ||||||||||| || | |||||||    
T  29451201 ttattataatttaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccggtgc-ccggaggcaccagttagcatttcc 29451299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 34396613 - 34396712
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| |||  | || ||||||||| | |||||||    
T  34396613 ttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaacctgtgtcctgggggcaccggttagcatttcc 34396712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 3026087 - 3026169
Alignment:
Q  3 ttttcacattattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgc 85  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||    
T  3026087 ttttgacattattataaattaattatacaatttcaatgcattaactactgtataatttcatttttcatacccttaaccagtgc 3026169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 85
Target Start/End: Original strand, 26467210 - 26467284
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgc 85  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||    
T  26467210 ttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccggtgc 26467284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 85
Target Start/End: Original strand, 34477636 - 34477710
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgc 85  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  34477636 ttattatcaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgc 34477710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 1391264 - 1391362
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| |||||| |||| | ||||| |||||||| | |||||||    
T  1391264 ttattataaattaattatacaatttcaatgcattaactactatataatttcctttttcatatccttaatcagtaccccgga-gcaccggttagcatttcc 1391362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 31280429 - 31280322
Alignment:
Q  3 ttttcacattattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtca 102  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| | ||||| ||||||  |||  |||||||| |    
T  31280429 ttttgacattattataaattaattatacaatttcaatgcattaactactatataatttcctttttcattctcttaatcagtgcctcgggagcaccggtta 31280330  T
Q  103 acatttcc 110  Q
     |||||||    
T  31280329 gcatttcc 31280322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 11 - 100
Target Start/End: Original strand, 32985279 - 32985368
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggt 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||| ||||||||| ||| |||  |||||||||    
T  32985279 ttattataaattaattacacaatttcaatacattaactactatataatttccttttttatatccttaaccaatgccccgagggcaccggt 32985368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 11115180 - 11115255
Alignment:
Q  10 attattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgc 85  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||| ||| |||||||||||||    
T  11115180 attattataaattaattacacaatttcaatgtattaactattatataatttccttttttatatccttaaccagtgc 11115255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 13417047 - 13417122
Alignment:
Q  10 attattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgc 85  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||| ||||||| |||||    
T  13417047 attattataaattaattacacaatttcaatacattaactaatatataatttcctttttcatatccttaactagtgc 13417122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 11 - 83
Target Start/End: Complemental strand, 2581052 - 2580980
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagt 83  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||| | |||||||||    
T  2581052 ttattataaattaattacataatttcaatgcattaactactatataatttccttttttatatcattaaccagt 2580980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 34851935 - 34851995
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcata 71  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  34851935 ttattataaatcaattacacaatttcaatgcattaactactatataatttcctttttcata 34851995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 29978332 - 29978234
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    |||||||||||  |||||| ||||||||| |||||| ||||||||||||| |||||||||| ||||||| |||| ||||||||||||||| | |||||||    
T  29978332 ttattataaatatattacataatttcaatacattaaatactatataatttcctttttcatatccttaactagtg-tccggaggcaccggttagcatttcc 29978234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 81
Target Start/End: Original strand, 25165499 - 25165569
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaacca 81  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||  ||||||||| |||||||||    
T  25165499 ttattataaattaattacacaatttcaatatattaactactatataatttcttttttcatatccttaacca 25165569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 11 - 84
Target Start/End: Complemental strand, 35043989 - 35043917
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtg 84  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||  ||||||||| ||||||||||||    
T  35043989 ttattataaattaat-acacaatttcaatgaattaactactatataatttcttttttcatatccttaaccagtg 35043917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 961109 - 961051
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttca 69  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  961109 ttattatcaattaattacacaattttaatgcattaactactatataatttcctttttca 961051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 80
Target Start/End: Complemental strand, 28225320 - 28225252
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaacc 80  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||| || |||||||||| ||||||||    
T  28225320 ttattataaattaattacacaatttcaatacattaattactatataa-ttcctttttcatatccttaacc 28225252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 1840333 - 1840409
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctc 87  Q
    ||||||||||||||||||||||||| ||| |||||| || ||||||||||  ||||| ||| |||||||||||||||    
T  1840333 ttattataaattaattacacaattttaatacattaattattatataatttctttttttatatccttaaccagtgctc 1840409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 5323500 - 5323424
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctc 87  Q
    ||||||||||||||||||| ||||| ||||| |||| ||||||||||||| |||||| |||  ||||| ||||||||    
T  5323500 ttattataaattaattacataattttaatgctttaattactatataatttccttttttatattcttaatcagtgctc 5323424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 79
Target Start/End: Complemental strand, 9661086 - 9661018
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaac 79  Q
    ||||| ||||||||||| ||||||||||||||||||||| ||| ||||||  ||||||||| |||||||    
T  9661086 ttattttaaattaattatacaatttcaatgcattaactattatgtaatttcttttttcatatccttaac 9661018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 169 - 210
Target Start/End: Complemental strand, 24883774 - 24883733
Alignment:
Q  169 caccttagctaatgcccaaatgctgaaatgggcacgatattc 210  Q
    ||||||| |||||||||| |||||||||||||||||||||||    
T  24883774 caccttaactaatgcccatatgctgaaatgggcacgatattc 24883733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 3246181 - 3246270
Alignment:
Q  20 attaattacacaa-tttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacattt 108  Q
    ||||||||||||| ||| |||||| ||| |||| |||||||| ||||||  || |||||| |||||||||   ||||||||| |||||||    
T  3246181 attaattacacaatttttaatgcaataattactgtataatttcctttttagtatccttaatcagtgctccaagggcaccggttaacattt 3246270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 11634027 - 11633970
Alignment:
Q  3 ttttcacattattataaattaattacacaattt-caatgcattaactactatataatt 59  Q
    |||| ||||| ||||  |||||||||||||||| ||||||| ||||||||||||||||    
T  11634027 ttttgacatttttatgtattaattacacaattttcaatgcaataactactatataatt 11633970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 10431827 - 10431787
Alignment:
Q  20 attaattacacaatttcaatgcattaactactatataattt 60  Q
    ||||||||||||||||||||| | |||||| ||||||||||    
T  10431827 attaattacacaatttcaatgtaataactattatataattt 10431787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 84; Significance: 5e-40; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 39074527 - 39074420
Alignment:
Q  3 ttttcacattattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtca 102  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||| |    
T  39074527 ttttgacattattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtgccccgggggcaccggtta 39074428  T
Q  103 acatttcc 110  Q
     |||||||    
T  39074427 gcatttcc 39074420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 52520789 - 52520682
Alignment:
Q  3 ttttcacattattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtca 102  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||| |    
T  52520789 ttttgacattattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtgccccgggggcaccggtta 52520690  T
Q  103 acatttcc 110  Q
     |||||||    
T  52520689 gcatttcc 52520682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 10 - 110
Target Start/End: Complemental strand, 43786972 - 43786872
Alignment:
Q  10 attattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttc 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |||||||||||||| | ||||||    
T  43786972 attattataaattaattacacaatttcaatgcattaactactatataatttcctttttcataccattaaccagtgccccggaggcaccggttagcatttc 43786873  T
Q  110 c 110  Q
    |    
T  43786872 c 43786872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 10 - 110
Target Start/End: Complemental strand, 20924093 - 20923993
Alignment:
Q  10 attattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttc 109  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||| | ||||||    
T  20924093 attattataaattaattacacaatttcaatgaattaactactatataatttcctttttcatacccttaaccagtgccccggaagcaccggttagcatttc 20923994  T
Q  110 c 110  Q
    |    
T  20923993 c 20923993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 272320 - 272221
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||| ||||||||| | |||||||    
T  272320 ttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgccccgggggcaccggttagcatttcc 272221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 3 - 90
Target Start/End: Original strand, 53489902 - 53489989
Alignment:
Q  3 ttttcacattattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccgg 90  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  53489902 ttttgacattattataaattaattacacaattttaatgcattaactactatataatttcctttttcatacccttaaccagtgccccgg 53489989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 43269825 - 43269923
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttc 109  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||| | |||||||| ||||||||||||||||| |||||||||| ||||||||    
T  43269825 ttattataaattaattacataatttcaatgcattaactactatgtaatttcccttttcatatccttaaccagtgctccgaaggcaccggttaacatttc 43269923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 4168283 - 4168184
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||| ||||||||||| | |||||||||||||| | |||||||    
T  4168283 ttattataaattaattacacaatttcaatacattaactactatataatttccttttttatatccttaaccagttccccggaggcaccggttagcatttcc 4168184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 41554026 - 41554105
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccgg 90  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||    
T  41554026 ttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcaccgg 41554105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 42964335 - 42964434
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||| ||||||||||||| ||||| ||||| || |||||||||    
T  42964335 ttattataaattaattacacaatttcaatgcattaactactataaaatttcatttttcatatccttaaccagtgccccggaagcaccagttaacatttcc 42964434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 46352734 - 46352635
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||| |||| ||||||||| | |||||||    
T  46352734 ttattatcaattaattacacaatttcaatgcattaactactgtataatttcctttttcatatccttaaccagtgccccgggggcaccggttagcatttcc 46352635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 49893431 - 49893332
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||| |||| ||||||||| | |||||||    
T  49893431 ttattatagattaattacacaatttcaatgcattaactattatataatttcctttttcatatccttaaccagtgccccgggggcaccggttagcatttcc 49893332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 10617370 - 10617468
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| ||| |||||| ||||| ||||| ||||||||| |||||||||    
T  10617370 ttattataaattaattacacaattttaatgcattaactactatataatttccttttttatatccttaatcagtg-tccgggggcaccggttaacatttcc 10617468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 48725371 - 48725272
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||| || | ||||||||| | |||||||    
T  48725371 ttattatcaattaattacacaatttcaatgcattaattactatataatttcctttttcatatccttaaccagtgcccccggggcaccggttagcatttcc 48725272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 52246682 - 52246583
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||||||  ||||||||| ||||||||||||| ||||||||||| || | |||||||    
T  52246682 ttattataaattaattatacaatttcaatgcattaacaactatataatttcatttttcatatccttaaccagtgccccggaggcaccagttagcatttcc 52246583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 100
Target Start/End: Complemental strand, 858689 - 858600
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggt 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||| | || |||||||||    
T  858689 ttattatcaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaactagtgcactgggggcaccggt 858600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 2119531 - 2119432
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| | |||||||||||  ||  | ||||||| |||||||||    
T  2119531 ttattataaattaattactcaatttcaatgcattaactactatataatttcctttttcatatctttaaccagtgcctcgaggacaccggttaacatttcc 2119432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 18014772 - 18014673
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| |||||| |||| |||||| || | |||||||    
T  18014772 ttattatagtttaattacacaatttcaatgcattaactactatataatttactttttcatatccttaatcagtgccccgggggcaccagttagcatttcc 18014673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 40362666 - 40362765
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||||  ||||||||| |||||| |||||| |||||||||| ||| | |||||||    
T  40362666 ttattatcaattaattacacaattttaatgcattaactactatataatttcttttttcatatccttaatcagtgccccggaggcacgggttagcatttcc 40362765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 11 - 84
Target Start/End: Complemental strand, 7468511 - 7468438
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtg 84  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||  ||||||||||||    
T  7468511 ttattataaattaattatacaatttcaatgcattaactactatataatttcctttttcatttccttaaccagtg 7468438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 11 - 100
Target Start/End: Original strand, 50395648 - 50395737
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggt 100  Q
    ||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||||| || |||||||||  |||| |||||||||    
T  50395648 ttattatcaattaattacacaatttctatgcattaactactgtataattttctttttcatatccctaaccagtgtcccgggggcaccggt 50395737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 41304103 - 41304006
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||| |||||||||||  ||||||||||||||| ||||||||||||| |||||||||| ||||||||| ||| |||||||||||||| | |||||||    
T  41304103 ttattatcaattaattaca--atttcaatgcattaattactatataatttcctttttcatatccttaaccactgccccggaggcaccggttagcatttcc 41304006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 11 - 85
Target Start/End: Original strand, 50359272 - 50359346
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgc 85  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||| |||||| || |||||||||||||    
T  50359272 ttattatatattaattacccaatttcaatgcattaactactatataattttttttttcttaaccttaaccagtgc 50359346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 84
Target Start/End: Complemental strand, 28139409 - 28139336
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtg 84  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||||  ||||||||| ||||||||||||    
T  28139409 ttattataaattaattatacaatttcaatgcattaactactatttaatttcttttttcatatccttaaccagtg 28139336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 11 - 83
Target Start/End: Original strand, 2938126 - 2938198
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagt 83  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||| | |||||||||    
T  2938126 ttattataaattaatcacacaatttcagtgcattaactactatataattttcttttttatatctttaaccagt 2938198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 11 - 79
Target Start/End: Complemental strand, 13159997 - 13159929
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaac 79  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||    
T  13159997 ttattatcaattaattacacaatttcaatgtattaactactatataatttcctttttcatatccttaac 13159929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 11 - 79
Target Start/End: Complemental strand, 29241737 - 29241669
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaac 79  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||| |||||||    
T  29241737 ttattataaattaattacataatttcaatgcattaactactatataatttccattttcatatccttaac 29241669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 49529352 - 49529434
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactac---tatataattttctttttcatacccttaaccagtgctccgg 90  Q
    ||||||||||||||||||| ||||||||||||||||||||   ||||||||||||||||||||| |||||| |||||| ||||    
T  49529352 ttattataaattaattacataatttcaatgcattaactactagtatataattttctttttcatatccttaatcagtgccccgg 49529434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 81
Target Start/End: Complemental strand, 2505449 - 2505379
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaacca 81  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||| |||||||||| | |||||||    
T  2505449 ttattatgaattaattacacaatttcaatgcactaactactatataatttcctttttcatatctttaacca 2505379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 85
Target Start/End: Complemental strand, 22248986 - 22248912
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgc 85  Q
    ||||||| ||||||||||||||||||||| || ||||||||||||||||| |||||||||| ||||||| |||||    
T  22248986 ttattatcaattaattacacaatttcaatacaataactactatataatttcctttttcatatccttaactagtgc 22248912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 85
Target Start/End: Complemental strand, 42548195 - 42548121
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgc 85  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||| | |||| ||||||    
T  42548195 ttattataaattaattacataatttcaatgcattaactactatataatttcttttttcatatctttaagcagtgc 42548121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 31514891 - 31514831
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcata 71  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||    
T  31514891 ttattataaattaattacacaattttaatacattaactactatataattttatttttcata 31514831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 50299031 - 50299087
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttcttttt 67  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  50299031 ttattataaattaattacacaatttcagtgcattaactactatataattttcctttt 50299087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 60
Target Start/End: Original strand, 41993705 - 41993754
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattt 60  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  41993705 ttattataaattaattacataatttcaatgcattaactactatataattt 41993754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 33140985 - 33140937
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataatt 59  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  33140985 ttattataaattaattatacaatttcaatgcattaactactatataatt 33140937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 2391688 - 2391633
Alignment:
Q  30 caatttcaatgcattaactactatataattttctttttcatacccttaaccagtgc 85  Q
    ||||||||||||||||||||||||||||||| ||||||| || |||||||||||||    
T  2391688 caatttcaatgcattaactactatataatttcctttttcttatccttaaccagtgc 2391633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 2393449 - 2393394
Alignment:
Q  30 caatttcaatgcattaactactatataattttctttttcatacccttaaccagtgc 85  Q
    ||||||||||||||||||||||||||||||| ||||||| || |||||||||||||    
T  2393449 caatttcaatgcattaactactatataatttcctttttcttatccttaaccagtgc 2393394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 11308296 - 11308395
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||| |||||||||||  |||||||||||||||||| |||||||||| |||||||| | |||||| |||||  |||||  ||||||| | |||||||    
T  11308296 ttattatcaattaattacattatttcaatgcattaactattatataatttcctttttcacatccttaatcagtgtcccggaaacaccggttagcatttcc 11308395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 84
Target Start/End: Complemental strand, 52718252 - 52718194
Alignment:
Q  26 tacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtg 84  Q
    |||||||||| |||| ||||||||||||||||||| |||||||||| ||||||||||||    
T  52718252 tacacaattttaatgtattaactactatataatttcctttttcatatccttaaccagtg 52718194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 79
Target Start/End: Complemental strand, 38852317 - 38852246
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcatta---actactatataattttctttttcatacccttaac 79  Q
    |||||||||||||||||||||||||||||||||||   |||||||||||||||  ||||| ||| |||||||    
T  38852317 ttattataaattaattacacaatttcaatgcattaattactactatataatttcattttttatatccttaac 38852246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 11 - 54
Target Start/End: Complemental strand, 6842719 - 6842676
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactata 54  Q
    ||||||||||||||||||||||||||||||||||||||| ||||    
T  6842719 ttattataaattaattacacaatttcaatgcattaactattata 6842676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 50
Target Start/End: Complemental strand, 6842642 - 6842604
Alignment:
Q  12 tattataaattaattacacaatttcaatgcattaactac 50  Q
    |||||||||||||||||||||||||||||||||||||||    
T  6842642 tattataaattaattacacaatttcaatgcattaactac 6842604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 85
Target Start/End: Complemental strand, 24488466 - 24488392
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgc 85  Q
    ||||||| |||||||||||| ||||| |||||||||||| |||||||||| |||||| | |  ||||||||||||    
T  24488466 ttattatcaattaattacactatttccatgcattaactattatataatttccttttttacattcttaaccagtgc 24488392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 21010092 - 21010041
Alignment:
Q  14 ttataaattaattacacaatttcaatgcattaactactatataattttcttttt 67  Q
    |||||||||||||| ||||||||||||  |||||||||||||||||| ||||||    
T  21010092 ttataaattaattatacaatttcaatg--ttaactactatataatttccttttt 21010041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 60
Target Start/End: Complemental strand, 2362931 - 2362883
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattt 60  Q
    ||||||| |||||||||||| |||||||||||||||||| ||||||||||    
T  2362931 ttattatcaattaattacactatttcaatgcattaacta-tatataattt 2362883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 54
Target Start/End: Complemental strand, 6842674 - 6842636
Alignment:
Q  16 ataaattaattacacaatttcaatgcattaactactata 54  Q
    ||||||||||||||||||||||||| |||||||| ||||    
T  6842674 ataaattaattacacaatttcaatgaattaactattata 6842636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 51818981 - 51819045
Alignment:
Q  31 aatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggca 95  Q
    ||||||||| || ||||||||| ||||||||||||||  || |||||| |||||| || ||||||    
T  51818981 aatttcaatacaataactactaaataattttctttttagtatccttaatcagtgccccagaggca 51819045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 82; Significance: 7e-39; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 4381903 - 4381806
Alignment:
Q  3 ttttcacattattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggt 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||    
T  4381903 ttttgacattattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtgcaccgggggcaccggt 4381806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 27856474 - 27856581
Alignment:
Q  3 ttttcacattattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtca 102  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||| |||| ||||||||| |    
T  27856474 ttttgacattattataaattaattacacaatttcaatgcattaactattatataatttcctttttcatactcttaaccagtgccccgggggcaccggtta 27856573  T
Q  103 acatttcc 110  Q
    ||||||||    
T  27856574 acatttcc 27856581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 561595 - 561703
Alignment:
Q  2 attttcacattattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtc 101  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||| |||||||||     
T  561595 attttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgccccgggggcaccggtt 561694  T
Q  102 aacatttcc 110  Q
    | |||||||    
T  561695 agcatttcc 561703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 2898171 - 2898073
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| | ||||||| |||||||||    
T  2898171 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatatccttaaccagtgttccgg-gacaccggttaacatttcc 2898073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 3668191 - 3668287
Alignment:
Q  3 ttttcacattattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggt 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||    
T  3668191 ttttgacattattataaattaattacacaatttcaatgcattaactactatataatttccttttccatacccttaaccagtg-tccgggggcaccggt 3668287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 6580297 - 6580190
Alignment:
Q  3 ttttcacattattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtca 102  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||||||| || | ||||| ||| |    
T  6580297 ttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccccggggcactggtta 6580198  T
Q  103 acatttcc 110  Q
     |||||||    
T  6580197 gcatttcc 6580190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 26387150 - 26387249
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||| || |||||||||| || | |||||||    
T  26387150 ttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaacaagtacttcggaggcaccagttagcatttcc 26387249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 31438746 - 31438647
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||| ||||  |||||||| | |||||||    
T  31438746 ttattataaattaattacacaatttcaatgcattaactactgtataatttcctttttcatatccttaaccagtgccccgggagcaccggttagcatttcc 31438647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 20553031 - 20552932
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||| || | ||||||||| | |||||||    
T  20553031 ttattatcaattaattacacaatttcaatgcattaattactatataatttcctttttcatatccttaaccagtgcccccggggcaccggttagcatttcc 20552932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 22887850 - 22887751
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||| ||||||||| ||| ||||||||| |||| | |||||||    
T  22887850 ttattataaattaattacataatttcaatgcattaactactatataatttcttttttcatatccttaaccactgccccggaggcatcggttagcatttcc 22887751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 31390112 - 31390013
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||||||| ||||||| ||||| ||||||||||| || | |||||||    
T  31390112 ttattataaattaattacataatttcaatacattaactactatataatttcctttttcatatccttaactagtgccccggaggcaccagttagcatttcc 31390013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 32860202 - 32860103
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| ||| |||||||| |||| || | ||||||||| |||||||||    
T  32860202 ttattataaattaattacacaatttcaatgcattaaatactatataatttccttttttatatccttaacccgtgcccccggggcaccggttaacatttcc 32860103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 34442618 - 34442716
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||  |||| |||| ||||||||| | |||||||    
T  34442618 ttattataaattaattacacaatttcaatgcattaactactatataatcttctttttcatatccttaacatgtgccccgg-ggcaccggttagcatttcc 34442716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 44588002 - 44587903
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||| |||||||| |||| |||| ||||||||| | |||||||    
T  44588002 ttattataaattaattacacaatttcaatgtattaactactatataatttccttttttatatccttaaccggtgccccgggggcaccggttagcatttcc 44587903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 85
Target Start/End: Original strand, 8969493 - 8969567
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgc 85  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  8969493 ttattataaattaattacactatttcaatgcattaactactatataattttctttttcatatccttaactagtgc 8969567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 84
Target Start/End: Complemental strand, 43637264 - 43637191
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtg 84  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||||    
T  43637264 ttattataaattaattacacaatttcaatgcattaactactatataatttccttattcatatccttaaccagtg 43637191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 26891749 - 26891848
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||| |||||| |||||  |||| ||||||||| | |||||||    
T  26891749 ttattataaattaattacacaatttcaatgcattaactaatatataatttccttttttatatccttaatcagtgtcccgggggcaccggttagcatttcc 26891848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 30486310 - 30486211
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||||  ||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||| |||| |||||| || | |||||||    
T  30486310 ttattatagtttaattacacaatttcaatacattaactactatataatttcctttttcatatccttaaccagtgccccgggggcaccagttagcatttcc 30486211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 5093625 - 5093703
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccg 89  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||| ||||||| |||||||||    
T  5093625 ttattataaattaattacacaattttaatgcattaactactatttaatttcctttttcatatccttaactagtgctccg 5093703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 85
Target Start/End: Complemental strand, 38296277 - 38296203
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgc 85  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| | |||||||||||    
T  38296277 ttattataaattaattacacaatttcaatgtattaattactatataattttctttttcatatctttaaccagtgc 38296203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 11 - 84
Target Start/End: Complemental strand, 22567702 - 22567629
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtg 84  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||| ||||||||||||    
T  22567702 ttattataaattaattacacaatttcaatacattaactactatataatttcttttttcatatccttaaccagtg 22567629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 11021308 - 11021406
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||  ||||||||| | |||| ||||||||| |||||||| || |||||||||    
T  11021308 ttattatatattaattacacaatttcaatgcattaactaccatataatttcttttttcatatctttaatcagtgctcc-gaggcaccagttaacatttcc 11021406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 32360955 - 32361054
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||| ||||||||| |  |||||||||||||||||| ||||||||||||||||||| | ||||||||||||| |||| ||||||||| | |||||||    
T  32360955 ttattatcaattaattatattatttcaatgcattaactattatataattttctttttcacatccttaaccagtgccccgggggcaccggttagcatttcc 32361054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 80
Target Start/End: Complemental strand, 27584838 - 27584769
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaacc 80  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| | |||||||| ||||||||    
T  27584838 ttattataaattaattacacaatttcaatgctttaactactatataatttcccttttcatatccttaacc 27584769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 5881321 - 5881238
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcat----taactactatataattttctttttcatacccttaaccagtgctccgg 90  Q
    ||||||| |||||||||||||||||||||||||    ||||||||||||||||| |||||||||| |||||||| |||||||||    
T  5881321 ttattatcaattaattacacaatttcaatgcatgcattaactactatataatttcctttttcatatccttaacctgtgctccgg 5881238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 22068406 - 22068490
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcac 96  Q
    ||||||| ||||||||| ||||||||||||||| |||||||||||||||  |||||||||| ||||||||||||| |||| |||||    
T  22068406 ttattatcaattaattatacaatttcaatgcat-aactactatataattccctttttcatatccttaaccagtgccccgggggcac 22068490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 39531921 - 39531868
Alignment:
Q  14 ttataaattaattacacaatttcaatgcattaactactatataattttcttttt 67  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  39531921 ttataaattaattacacaatttcaatgcattaactactatataatttccttttt 39531868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 1859262 - 1859163
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||||  ||||| ||| ||||||||| | | |||| |||||| || | |||||||    
T  1859262 ttattataaattaattacataatttcaatgcattaactactatacaatttctttttttatatccttaaccattaccccgggggcaccagttagcatttcc 1859163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 38590960 - 38591059
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||| ||||||||||||||||| ||| ||||||||||| |||||||| ||||||||||  |||||||||||| || | | ||||||| | |||||||    
T  38590960 ttattatcaattaattacacaattttaatacattaactactgtataatttcctttttcatattcttaaccagtgccccagggacaccggttagcatttcc 38591059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 14 - 67
Target Start/End: Original strand, 15079047 - 15079100
Alignment:
Q  14 ttataaattaattacacaatttcaatgcattaactactatataattttcttttt 67  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  15079047 ttataaattaattacacaatttcaatacattaactactatataatttccttttt 15079100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 11 - 83
Target Start/End: Original strand, 13574115 - 13574187
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagt 83  Q
    ||||||||||||||||||||||||||||| |||||| |  |||||| ||| |||||||||| |||||||||||    
T  13574115 ttattataaattaattacacaatttcaatacattaatttttatatattttcctttttcatatccttaaccagt 13574187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 85
Target Start/End: Complemental strand, 28601066 - 28600993
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgc 85  Q
    ||||||| ||||||||| ||||||||||||||| ||||||| |||||||  |||||||||| |||||||||||||    
T  28601066 ttattatcaattaattatacaatttcaatgcat-aactactttataattccctttttcatatccttaaccagtgc 28600993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 85
Target Start/End: Original strand, 35851837 - 35851911
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgc 85  Q
    ||||||| |||||||||||  |||||||||||||||||| |||||||||| |||||||| | |||||||| ||||    
T  35851837 ttattatcaattaattacattatttcaatgcattaactattatataatttcctttttcacatccttaaccggtgc 35851911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 110
Target Start/End: Original strand, 34123113 - 34123209
Alignment:
Q  14 ttataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||||||||||||||| ||||| |||||||||| ||||||||||  |||||  ||  || ||||||| | |||||||||||||| | |||||||    
T  34123113 ttataaattaattacacaaattcaaagcattaactattatataatttcttttttagtatgctcaaccagtaccccggaggcaccggttagcatttcc 34123209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 11 - 84
Target Start/End: Original strand, 25782919 - 25782989
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtg 84  Q
    |||||||||| ||||||||||||||||||||||||   |||||||||||| ||||||||||  |||||| ||||    
T  25782919 ttattataaaataattacacaatttcaatgcatta---actatataatttcctttttcatattcttaactagtg 25782989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 81
Target Start/End: Original strand, 29102369 - 29102439
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaacca 81  Q
    ||||||||||||||||| | |||||||||| ||||||  |||||||||||||||||| |||  ||||||||    
T  29102369 ttattataaattaattataaaatttcaatgtattaaccgctatataattttctttttgatattcttaacca 29102439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 4022565 - 4022624
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcata 71  Q
    ||||||||||||||||||| ||||||||| ||||||||||||| ||||||  |||||||||    
T  4022565 ttattataaattaattacagaatttcaatacattaactactat-taatttcttttttcata 4022624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 25772211 - 25772112
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaacta-ctatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttc 109  Q
    ||||||||||||||||||||||||||| |||||||| ||  | |||||||| ||||||||||  |||||| |||| | ||||| ||||| | ||||||||    
T  25772211 ttattataaattaattacacaatttcattgcattaattatttttataatttcctttttcatattcttaactagtg-ttcggagacaccgattaacatttc 25772113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 15146729 - 15146682
Alignment:
Q  14 ttataaattaattacacaatttcaatgcattaactactatataatttt 61  Q
    |||||||||||||| |||||||||||| |||||||| |||||||||||    
T  15146729 ttataaattaattatacaatttcaatgtattaactattatataatttt 15146682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 16807318 - 16807409
Alignment:
Q  20 attaattacacaattt-caatgcattaactactatataattttcttttt-catacccttaaccagtgctccggaggcaccggtcaacatttc 109  Q
    |||||||||||| ||| ||||||| ||||||||||||||||||||||||  | | ||||||||| |||  ||||||||||||| | ||||||    
T  16807318 attaattacacagttttcaatgcaataactactatataattttctttttaaacatccttaaccaatgcctcggaggcaccggttagcatttc 16807409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 16846599 - 16846690
Alignment:
Q  20 attaattacacaattt-caatgcattaactactatataattttcttttt-catacccttaaccagtgctccggaggcaccggtcaacatttc 109  Q
    |||||||||||| ||| ||||||| ||||||||||||||||||||||||  | | ||||||||| |||  ||||||||||||| | ||||||    
T  16846599 attaattacacagttttcaatgcaataactactatataattttctttttaaacatccttaaccaatgcctcggaggcaccggttagcatttc 16846690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 67
Target Start/End: Original strand, 30217662 - 30217705
Alignment:
Q  24 attacacaatttcaatgcattaactactatataattttcttttt 67  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||    
T  30217662 attacacaatttcaatgcaataaatactatataattttcttttt 30217705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 110
Target Start/End: Original strand, 35470368 - 35470405
Alignment:
Q  73 ccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||||||||| |||||||||||||| |||||||||    
T  35470368 ccttaaccagtgccccggaggcaccggttaacatttcc 35470405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 67
Target Start/End: Original strand, 29999083 - 29999131
Alignment:
Q  20 attaattacacaattt-caatgcattaactactatataattttcttttt 67  Q
    |||||||||||||||| |||||||  ||||| |||||||||||||||||    
T  29999083 attaattacacaattttcaatgcaagaactattatataattttcttttt 29999131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 80; Significance: 1e-37; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 12506404 - 12506297
Alignment:
Q  3 ttttcacattattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtca 102  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||||| ||||||||||| |    
T  12506404 ttttgacattattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatactcttaacgagtgctccagaggcaccggtta 12506305  T
Q  103 acatttcc 110  Q
     |||||||    
T  12506304 gcatttcc 12506297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 34650911 - 34651017
Alignment:
Q  3 ttttcacattattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtca 102  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||| |    
T  34650911 ttttgacattattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtgc-ccgggggcaccggtta 34651009  T
Q  103 acatttcc 110  Q
     |||||||    
T  34651010 gcatttcc 34651017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 35504318 - 35504425
Alignment:
Q  3 ttttcacattattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtca 102  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||| ||||||||| |    
T  35504318 ttttgacattattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtgtcccgggggcaccggtta 35504417  T
Q  103 acatttcc 110  Q
     |||||||    
T  35504418 gcatttcc 35504425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 10054430 - 10054537
Alignment:
Q  3 ttttcacattattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtca 102  Q
    |||| ||||||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||||||||| |||| ||||||||| |    
T  10054430 ttttgacattattataaattaattacacaatttcaatgcattaattattatataatttcctttttcatacccttaaccagtgccccgggggcaccggtta 10054529  T
Q  103 acatttcc 110  Q
     |||||||    
T  10054530 gcatttcc 10054537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 13661908 - 13661809
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||||| | |||||||    
T  13661908 ttattatcaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgctccgggggcaccggttagcatttcc 13661809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 10 - 110
Target Start/End: Complemental strand, 8787440 - 8787340
Alignment:
Q  10 attattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttc 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||| |||| | ||||||| | ||||||    
T  8787440 attattataaattaattacacaatttcaatgcattaactactatataatttcatttttcatacccttaaccaatgccccggggacaccggttagcatttc 8787341  T
Q  110 c 110  Q
    |    
T  8787340 c 8787340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 6283662 - 6283563
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| | ||||| ||||| |||||||||||||| | |||||||    
T  6283662 ttattataaattaattacacaatttcaatgcattaattattatataattttctttttcatatctttaactagtgccccggaggcaccggttagcatttcc 6283563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 35132622 - 35132523
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||  |||| ||||||||| | |||||||    
T  35132622 ttattataaattaattacacaatttcaatgtattaactactatataatttcctttttcatatccttaaccagtgtcccgggggcaccggttagcatttcc 35132523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 10070060 - 10069970
Alignment:
Q  20 attaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||| ||||||||| | |||||||    
T  10070060 attaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgccccgggggcaccggttagcatttcc 10069970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 4837357 - 4837259
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||  ||||||| |||| |||| ||||||||| |||||||||    
T  4837357 ttattataaattaattacacaatttcaatgcattaattactatataatttcctttttcatattcttaaccggtgccccgg-ggcaccggttaacatttcc 4837259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 31909731 - 31909633
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| | |||| ||| |||||||||||  ||||||||||||||| |||||||||    
T  31909731 ttattataaatcaattacacaatttcaatgcattaactactatataatttcccttttaatatccttaaccagt-atccggaggcaccggttaacatttcc 31909633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 19647744 - 19647825
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggag 92  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||    
T  19647744 ttattatcaattaattatacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgccccggag 19647825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 2619643 - 2619742
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||| ||||  |||||| |||| || | |||||||    
T  2619643 ttattataaattaattacacaatttcaatacattaactactaaataattttctttttcatatccttaacaagtgtcccggagacaccagttagcatttcc 2619742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 13470251 - 13470152
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||||||||||||| |||||||||||||||| |||||||||| |||| |||||||||| ||||||||||||| ||  |||||||||| | |||||||    
T  13470251 ttattataaattaattatacaatttcaatgcattgactactatattatttcctttttcatatccttaaccagtgccccataggcaccggttagcatttcc 13470152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 21547480 - 21547549
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaacc 80  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||    
T  21547480 ttattataaattaattacacaatttcaatgcattaactactatataatttccttttttatatccttaacc 21547549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 11958053 - 11958152
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||| ||| | |||||| |||| |||| ||||||||| | |||||||    
T  11958053 ttattatcaattaattacacaatttcattgcattaactactatataatttccttttttatatctttaacctgtgccccgggggcaccggttagcatttcc 11958152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 78
Target Start/End: Original strand, 40564490 - 40564557
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaa 78  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||||    
T  40564490 ttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcaaatccttaa 40564557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 11 - 83
Target Start/End: Original strand, 9721693 - 9721765
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagt 83  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||||||||  ||||||||||    
T  9721693 ttattataaattaattaaacaatttcaatgcattaattactatataatttcctttttcatattcttaaccagt 9721765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 22 - 110
Target Start/End: Complemental strand, 39069469 - 39069382
Alignment:
Q  22 taattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    |||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||| | ||| |||||||| | |||||||    
T  39069469 taattacacaattttaatgcattaactactatataa-tttccttttcatacccttaaccagtgccctggaagcaccggttagcatttcc 39069382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 20175327 - 20175228
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||   ||||||||||   ||||| ||||||| | |||||||    
T  20175327 ttattataaattaattacacaatttcaatgcattaactactatataatttctttttttatatttttaaccagtgtctcggagacaccggttagcatttcc 20175228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 77
Target Start/End: Complemental strand, 11846172 - 11846106
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcataccctta 77  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||| |||||    
T  11846172 ttattataaattaattacacaatttcaatgtattaactactatataatttccttttttatatcctta 11846106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 78
Target Start/End: Complemental strand, 40057407 - 40057340
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaa 78  Q
    ||||||||||||||||| || ||||||||||| ||||||||||||||||| |||||||||| ||||||    
T  40057407 ttattataaattaattatactatttcaatgcactaactactatataatttcctttttcatatccttaa 40057340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 19436926 - 19436995
Alignment:
Q  15 tataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtg 84  Q
    ||||||||||||| ||||||||||||| ||||| |||||||||||| |||||||||| ||||||| ||||    
T  19436926 tataaattaattatacaatttcaatgctttaaccactatataatttcctttttcatatccttaacgagtg 19436995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 84
Target Start/End: Complemental strand, 6284892 - 6284822
Alignment:
Q  14 ttataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtg 84  Q
    |||||||||||||| ||||||||||| |||||| ||||||||||||| ||||||  || ||||||||||||    
T  6284892 ttataaattaattatacaatttcaatacattaattactatataatttcctttttagtatccttaaccagtg 6284822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 84
Target Start/End: Original strand, 39067021 - 39067095
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaact-actatataattttctttttcatacccttaaccagtg 84  Q
    ||||||||||||||||||| |||||||||  ||||||| | ||||||||||  ||||||||| ||||||||||||    
T  39067021 ttattataaattaattacataatttcaatatattaactaattatataatttcttttttcatatccttaaccagtg 39067095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 53
Target Start/End: Complemental strand, 4268659 - 4268620
Alignment:
Q  14 ttataaattaattacacaatttcaatgcattaactactat 53  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  4268659 ttataaattaattacacaattttaatgcattaactactat 4268620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 95
Target Start/End: Complemental strand, 10956048 - 10955967
Alignment:
Q  14 ttataaattaattacacaatttcaatgcattaactactatataattttctttt-tcatacccttaaccagtgctccggaggca 95  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||  ||||| |  ||  |||||||||||| |||||||||    
T  10956048 ttataaattaatta-acaatttcaatgcattaactactttataattcccttttatggtatgcttaaccagtgccccggaggca 10955967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 21944954 - 21945046
Alignment:
Q  20 attaattacacaatttc-aatgcattaactactatataattttctttttcat-acccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    |||||||| |||||||  |||||| ||| || |||||||||||| |||| || | ||||||||||||| |||||||||||||| | |||||||    
T  21944954 attaattaaacaatttttaatgcaataattaatatataattttcctttttattatccttaaccagtgccccggaggcaccggttagcatttcc 21945046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 6042142 - 6042208
Alignment:
Q  20 attaattacacaattt-caatgcattaactactatataattttctttttcatacccttaaccagtgc 85  Q
    |||||||||||||||| ||||||| ||| |||||||||||||| |||||  || | |||||||||||    
T  6042142 attaattacacaattttcaatgcaataattactatataattttttttttagtatctttaaccagtgc 6042208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 67
Target Start/End: Original strand, 12289458 - 12289496
Alignment:
Q  29 acaatttcaatgcattaactactatataattttcttttt 67  Q
    |||||||||||||| ||| ||||||||||||||||||||    
T  12289458 acaatttcaatgcaataaatactatataattttcttttt 12289496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 25731461 - 25731514
Alignment:
Q  14 ttataaattaattacacaatttc-aatgcattaactactatataattttctttt 66  Q
    |||||| |||||||||||||||  |||||| |||||||||||||||||| ||||    
T  25731461 ttataacttaattacacaatttttaatgcaataactactatataattttttttt 25731514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0524 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0524
Description:

Target: scaffold0524; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 934 - 837
Alignment:
Q  2 attttcacattattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccgg 99  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||    
T  934 attttgactttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatatccttaactagtgctccggaagcaccgg 837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 53763 - 53870
Alignment:
Q  3 ttttcacattattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtca 102  Q
    |||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||| |    
T  53763 ttttgacattatgataaattaattacacaattttaatgcattaactactatataatttcctttttcatacccttaaccagtgccccgggggcaccggtta 53862  T
Q  103 acatttcc 110  Q
     |||||||    
T  53863 gcatttcc 53870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 23061 - 22962
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||| |||||||||||||||||| ||||||||| | |||||||    
T  23061 ttattataaattaattacacaatttcaatgtattaattactatataatttcctttttcatatccttaaccagtgctccgggggcaccggttagcatttcc 22962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 69; Significance: 4e-31; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 50657 - 50549
Alignment:
Q  2 attttcacattattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtc 101  Q
    ||||| || ||||||||||||||||| ||||||||||  |||||||||||||||||||| |||||||||| | ||||||||||| ||||||||||||||     
T  50657 attttgactttattataaattaattatacaatttcaaaacattaactactatataatttcctttttcatatctttaaccagtgccccggaggcaccggtt 50558  T
Q  102 aacatttcc 110  Q
    |||||||||    
T  50557 aacatttcc 50549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 11 - 84
Target Start/End: Original strand, 53432 - 53505
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtg 84  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||    
T  53432 ttattataaattaattatacaatttcaatgcattaactactatataatttccttttttatatccttaaccagtg 53505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 85
Target Start/End: Original strand, 7983 - 8057
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgc 85  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  7983 ttattatcaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgc 8057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 85
Target Start/End: Complemental strand, 7388 - 7314
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgc 85  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  7388 ttattatcaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgc 7314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 100
Target Start/End: Complemental strand, 116304 - 116215
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggt 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||||| |||| |||| |||||||||    
T  116304 ttattatcaattaattacacaatttcaatgcattaactactatataatttcctttttcatatctttaacctgtgccccgggggcaccggt 116215  T

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Target: scaffold1152 (Bit Score: 60; Significance: 9e-26; HSPs: 1)
Name: scaffold1152
Description:

Target: scaffold1152; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 11 - 98
Target Start/End: Complemental strand, 778 - 691
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccg 98  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| | |||||| |||||| || |||||||    
T  778 ttattataaattaattacacaatttcaatggattaactactatataatttcctttttcatatctttaacccgtgctctgggggcaccg 691  T

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Target: scaffold0188 (Bit Score: 60; Significance: 9e-26; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 6196 - 6295
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||| ||| |||||||||| ||||||||||||| || | ||||||||| | |||||||    
T  6196 ttattataatttaattacacaattccaatgcattaactactatatagtttcctttttcatatccttaaccagtgccccaggggcaccggttagcatttcc 6295  T

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Target: scaffold1266 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold1266
Description:

Target: scaffold1266; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 85
Target Start/End: Complemental strand, 392 - 318
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgc 85  Q
    |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||    
T  392 ttattataaatttattacacaatttcaatgcattaactattatataattttctttttcatatgcttaaccagtgc 318  T

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Target: scaffold0014 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 68367 - 68475
Alignment:
Q  2 attttcacattattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtc 101  Q
    ||||| || ||||||||| ||| ||||||||||| ||||||||||||||||||||||||  ||||||||| ||||||||||||| |||| |||||| ||     
T  68367 attttaactttattataatttatttacacaattttaatgcattaactactatataatttcatttttcatatccttaaccagtgccccgggggcaccagtt 68466  T
Q  102 aacatttcc 110  Q
    | |||||||    
T  68467 agcatttcc 68475  T

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Target: scaffold0206 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 84
Target Start/End: Original strand, 11056 - 11129
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtg 84  Q
    ||||||||  ||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||    
T  11056 ttattatagtttaattacacaatttcaatgcattaactaatatataatttcctttttcatatccttaaccagtg 11129  T

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Target: scaffold0002 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 11 - 79
Target Start/End: Original strand, 146991 - 147059
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaac 79  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||    
T  146991 ttattatcaattaattacacaatttcaatgtattaactactatataatttcctttttcatatccttaac 147059  T

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Target: scaffold0190 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 14996 - 14897
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggtcaacatttcc 110  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||||  ||||| ||| | ||||||||||| |||| | ||||||| | |||||||    
T  14996 ttattataaattaactacacaatttcagtgcattaactactatataatttctttttttatatctttaaccagtgccccggggacaccggttagcatttcc 14897  T

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Target: scaffold0325 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 85
Target Start/End: Original strand, 17557 - 17630
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgc 85  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| || ||| ||||||    
T  17557 ttattataaattaatt-cacaatttcaatgcattagctactatataattttctttttcatatccgtaaacagtgc 17630  T

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Target: scaffold0050 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 85
Target Start/End: Complemental strand, 69326 - 69252
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgc 85  Q
    ||||||||||||||||||| ||||| |||| ||||||||||||||||||| |||||||||| ||||||| |||||    
T  69326 ttattataaattaattacataattttaatgtattaactactatataatttactttttcatatccttaacgagtgc 69252  T

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Target: scaffold0050; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 33770 - 33845
Alignment:
Q  14 ttataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccg 89  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||| | |||| |||  |||||| |||||||||    
T  33770 ttataaattaattacacaatttcaatgtattaactattatataatttccattttaatatacttaacaagtgctccg 33845  T

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Target: scaffold0113 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 41017 - 40933
Alignment:
Q  13 attataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcacc 97  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||||  |||||||||  ||||| | |||||||||| |||||    
T  41017 attataaattaattacataatttcaatgcattaactattatataatttcatttttcatattcttaatcggtgctccggaagcacc 40933  T

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Target: scaffold0038 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 80
Target Start/End: Complemental strand, 25818 - 25750
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaacc 80  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||| || |||||||||| ||||||||    
T  25818 ttattataaattaattacacaatttcaatacattaattactatataa-ttcctttttcatatccttaacc 25750  T

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Target: scaffold0034 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 100
Target Start/End: Original strand, 95670 - 95759
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgctccggaggcaccggt 100  Q
    ||||||||||||||||||| ||||||||| |||||| || |||||||||| ||||||||||  |||||||||| |  ||| |||||||||    
T  95670 ttattataaattaattacataatttcaattcattaattattatataatttcctttttcatattcttaaccagtacctcgggggcaccggt 95759  T

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Target: scaffold0533 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 80
Target Start/End: Complemental strand, 5136 - 5070
Alignment:
Q  14 ttataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaacc 80  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||| ||||| |||  |||||||    
T  5136 ttataaattaattacacaatttcaataaattaactactatataattttttttttaatattcttaacc 5070  T

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Target: scaffold0263 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 19671 - 19740
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaacc 80  Q
    |||||||||||| ||||||||||||||||||||||| || ||||||||||  |||||||||  |||||||    
T  19671 ttattataaattcattacacaatttcaatgcattaattattatataatttcttttttcatatgcttaacc 19740  T

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Target: scaffold0425 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0425
Description:

Target: scaffold0425; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 11 - 50
Target Start/End: Complemental strand, 10810 - 10771
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaactac 50  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  10810 ttattataaattaattacacaatttcaatgcattaactac 10771  T

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Target: scaffold1128 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1128
Description:

Target: scaffold1128; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 1462 - 1422
Alignment:
Q  20 attaattacacaatttcaatgcattaactactatataattt 60  Q
    ||||||||||||||||||||||| |||||| ||||||||||    
T  1462 attaattacacaatttcaatgcaataactattatataattt 1422  T

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Target: scaffold0007 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 46
Target Start/End: Complemental strand, 233953 - 233918
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaa 46  Q
    |||||||||||||||||||||||||||||| |||||    
T  233953 ttattataaattaattacacaatttcaatgaattaa 233918  T

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Target: scaffold0015 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 74559 - 74620
Alignment:
Q  11 ttattataaattaattacacaatttcaatgcattaact-actatataattttctttttcata 71  Q
    ||||||| ||||||||| ||||||||| | |||||| | ||||||||||||| |||||||||    
T  74559 ttattatcaattaattatacaatttcactacattaatttactatataattttttttttcata 74620  T

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