View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10137_low_6 (Length: 391)
Name: NF10137_low_6
Description: NF10137
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10137_low_6 |
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Alignment Details
Target: chr3 (Bit Score: 263; Significance: 1e-146; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 26 - 373
Target Start/End: Complemental strand, 27016280 - 27015937
Alignment:
| Q |
26 |
tatgctgttgatcctgtgttgcacacattaacatttgaattcgttgacggaccttcggtcaaagatgtatttcttgaattcggatcatgcggtgtcaatg |
125 |
Q |
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| T |
27016280 |
tatgctgtggatcctgtatcacacactttaacatttgaatttgttgaaggaccttcagtcaaagatgtatttctcgaattcggatcatgtggtgtcaatg |
27016181 |
T |
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| Q |
126 |
aagagcgcctgggaaagattgcatcccaaattggtgatgtaattgcgaagttacatgatggtggtcttgttcatggcgatttaacaacatcaaacatgtt |
225 |
Q |
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| T |
27016180 |
aagagcgcttgggaaagattgcatcccaaattggtgatgtaattgcgaagttacatgatggtggtcttgttcatggcgatttaacaacatcaaacatgtt |
27016081 |
T |
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| Q |
226 |
actaaagaatgatactgatcagttggtgcgttcattcatctcttaggtcctgtaattaatatttattacatttacttaggttatacaatatgagaaatat |
325 |
Q |
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| T |
27016080 |
actaaagaatgatactgatcagttggtgagttcattcgtctcttaggtcctggaattaatatttattacatttacttag----tacaatatgagaaatat |
27015985 |
T |
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| Q |
326 |
cattaacgtttgttagtgctgtgatgtgtattttgtgtaggttcttat |
373 |
Q |
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| T |
27015984 |
cattaacttttgttgctgctgtgatgtgtattttgtgtaggttcttat |
27015937 |
T |
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