View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10138_high_9 (Length: 228)
Name: NF10138_high_9
Description: NF10138
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10138_high_9 |
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Alignment Details
Target: chr7 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 31967385 - 31967583
Alignment:
| Q |
1 |
caacgcacaacataacagcggtagatactggatacacgcatcccgaatagaatactctcactctcctccaccaaccacatttttatatttcatttcatca |
100 |
Q |
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| T |
31967385 |
caacgcacaacataacagcggtagatactggatacacgaatcccgaata-------ctcactctcctccaccaaccacatttttatatttcatttcatca |
31967477 |
T |
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| Q |
101 |
ttcaaaattataaaaacattctttactgtagtagtatacacattttcattttcattttattaattgatcgttgaaccaaagtccaaaacatttattacag |
200 |
Q |
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| T |
31967478 |
ttcaaaattataaaaacattctttact-----agtatacacattttcattttcattttattaattgatcgttgaatcaaagtccaaaacatttattacag |
31967572 |
T |
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