View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10138_low_10 (Length: 251)
Name: NF10138_low_10
Description: NF10138
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10138_low_10 |
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Alignment Details
Target: chr5 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 42650452 - 42650691
Alignment:
| Q |
1 |
aaatccataataagaccgacttcgcatgtcggacatggctgtttgcaggtcggtttggttaaaagcagctgttgtggattgagattcaccaactgccaag |
100 |
Q |
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| T |
42650452 |
aaatccataataagaccgactttgcatgtcggacatggctgtttgcaggtcggtttggttaaaagcagctgttgtggattgagattcaccaactgccaag |
42650551 |
T |
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| Q |
101 |
agtgtaaggatgagtacaaaccagagagaaattgtgaaaagcttgagtttttgcttgaatctctaattttgtgtagtaatgaatg--aaatgtaatttca |
198 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
42650552 |
agtgtaaggatgagtacaaaccagagagccattgtgaaaagcttgagtttttgcttgaatctctaattttgtgtagtaatgaatgaaaaatgtaatttca |
42650651 |
T |
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| Q |
199 |
ccttgcatggtatttatagcaatgttattatccattgcct |
238 |
Q |
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| T |
42650652 |
ctttgcatggtatttatagcaatgttattatccattgcct |
42650691 |
T |
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