View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10138_low_11 (Length: 239)
Name: NF10138_low_11
Description: NF10138
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10138_low_11 |
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Alignment Details
Target: chr4 (Bit Score: 168; Significance: 4e-90; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 58 - 225
Target Start/End: Complemental strand, 45408243 - 45408076
Alignment:
| Q |
58 |
gaaagcaaaataagtggcgaattggaataagcttgaatgcatcaaaattattactcaaatttctgagaaattaaatctactcagaagactttgtcaagca |
157 |
Q |
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| T |
45408243 |
gaaagcaaaataagtggcgaattggaataagcttgaatgcatcaaaattattactcaaatttctgagaaattaaatctactcagaagactttgtcaagca |
45408144 |
T |
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| Q |
158 |
tcttgaaaatgtatttatttcttcataaatccagctataacgtagacgtgtataattgaagtgagtta |
225 |
Q |
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| T |
45408143 |
tcttgaaaatgtatttatttcttcataaatccagctataacgtagacgtgtataattgaagtgagtta |
45408076 |
T |
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