View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10140A_low_113 (Length: 327)
Name: NF10140A_low_113
Description: NF10140A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10140A_low_113 |
 | |
|
| [»] scaffold0167 (1 HSPs) |
| | |
|
| [»] scaffold0014 (3 HSPs) |
| | |
|
| [»] scaffold1270 (1 HSPs) |
| | |
|
| [»] scaffold1284 (1 HSPs) |
| | |
|
Alignment Details
Target: chr8 (Bit Score: 270; Significance: 1e-151; HSPs: 10)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 1 - 312
Target Start/End: Original strand, 40444207 - 40444516
Alignment:
| Q |
1 |
tcaagtacttagtggagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattagg |
100 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40444207 |
tcaagtacttagtggagatattgaaa-gttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattagg |
40444305 |
T |
|
| Q |
101 |
ggttaactaggagactcctacctatataaatgtacactctcacaacataatatgatataataaacatattttcagttctaatannnnnnntctaaatacc |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
40444306 |
ggttaactaggagactcctacctatataaatgtacactctcactacataatatcatataataaacatattttcagttctaata-cccccctctaaatacc |
40444404 |
T |
|
| Q |
201 |
tgacaaagaaggtcggcctcatcagaaaatggtgaccactgaactactgtttcaacattattgttccagtcatccagagaagttcgcaacatctttttcc |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40444405 |
tgacaaagaaggtcggcctcatcagaaaatggtgaccactgaactactgtttcaacattattgttccagtcatccagagaagttcgcaacatctttttcc |
40444504 |
T |
|
| Q |
301 |
atccctgtccat |
312 |
Q |
| |
|
|||||||||||| |
|
|
| T |
40444505 |
atccctgtccat |
40444516 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 171; E-Value: 8e-92
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 18898990 - 18898808
Alignment:
| Q |
1 |
tcaagtacttagtggagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattagg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18898990 |
tcaagtacttagtggagatattgaaaagttgtgactgtttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattagg |
18898891 |
T |
|
| Q |
101 |
ggttaactaggagactcctacctatataaatgtacactctcacaacataatatgatataataaacatattttcagttctaata |
183 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18898890 |
ggttaactagaagactcctacctatataaatgtacactctcaccacataatatgatataataaacatattttcagttctaata |
18898808 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 20793187 - 20793369
Alignment:
| Q |
1 |
tcaagtacttagtggagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattagg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
20793187 |
tcaagtacttagtggagatattgaaaagttgcgactatttagtttcaactccactagccattgtattgattgtattgaataatcttccttattaattagg |
20793286 |
T |
|
| Q |
101 |
ggttaactaggagactcctacctatataaatgtacactctcacaacataatatgatataataaacatattttcagttctaata |
183 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20793287 |
ggttaactaggagactcttacctatataaatgtacactctcaccacataatatgatataataaacatattttcagttctaata |
20793369 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 44197634 - 44197816
Alignment:
| Q |
1 |
tcaagtacttagtggagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattagg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44197634 |
tcaagtacttagtggagatattgaaaagttctgactatttagtttcaactccactggccattgtattgattgtattgattaatcttccttattaattagg |
44197733 |
T |
|
| Q |
101 |
ggttaactaggagactcctacctatataaatgtacactctcacaacataatatgatataataaacatattttcagttctaata |
183 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44197734 |
ggttaactaggagactcttacctatataaatgtacactctcaccacataatatgatataataaacatattttcagttctaata |
44197816 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 44202476 - 44202658
Alignment:
| Q |
1 |
tcaagtacttagtggagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattagg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44202476 |
tcaagtacttagtggagatattgaaaagttctgactatttagtttcaactccactggccattgtattgattgtattgattaatcttccttattaattagg |
44202575 |
T |
|
| Q |
101 |
ggttaactaggagactcctacctatataaatgtacactctcacaacataatatgatataataaacatattttcagttctaata |
183 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44202576 |
ggttaactaggagactcttacctatataaatgtacactctcaccacataatatgatataataaacatattttcagttctaata |
44202658 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 1068046 - 1067864
Alignment:
| Q |
1 |
tcaagtacttagtggagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattagg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1068046 |
tcaagtacttagtggagatattgaaaagttctgactatttagtttcaactccactggccattgtattgattgtattgattaatcttccttattaattagg |
1067947 |
T |
|
| Q |
101 |
ggttaactaggagactcctacctatataaatgtacactctcacaacataatatgatataataaacatattttcagttctaata |
183 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||| |
|
|
| T |
1067946 |
ggttaactaggagactcttacctatataaatgtacactctcaccacataatatgaaataataaacatattttcagttttaata |
1067864 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 18 - 173
Target Start/End: Original strand, 2354909 - 2355061
Alignment:
| Q |
18 |
atattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattaggggttaactaggagactc |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||| | |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
2354909 |
atattgaaaagttgtgactatttagttttaacttcactatttattgtatt---tgtattgattaatcttccttattaattagggattaactaggagactc |
2355005 |
T |
|
| Q |
118 |
ctacctatataaatgtacactctcacaacataatatgatataataaacatattttc |
173 |
Q |
| |
|
||||| ||||||||||||| |||| ||||||| |||||| ||||||||| |||| |
|
|
| T |
2355006 |
ctacccatataaatgtacattctcctcacataatttgatatgataaacataatttc |
2355061 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 15 - 169
Target Start/End: Original strand, 27414679 - 27414824
Alignment:
| Q |
15 |
gagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattaggggttaactaggaga |
114 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||| ||||||| |||| |
|
|
| T |
27414679 |
gagatattgaaaagttgtcactatttagttttaacttcacta---------tttattgtattgattaatcttccttattaattagggattaactaagaga |
27414769 |
T |
|
| Q |
115 |
ctcctacctatataaatgtacactctcacaacataatatgatataataaacatat |
169 |
Q |
| |
|
|||||||| ||||||||||||| |||| |||||| || |||||| |||||||||| |
|
|
| T |
27414770 |
ctcctacccatataaatgtacattctcccaacatgatttgatatgataaacatat |
27414824 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 15 - 176
Target Start/End: Complemental strand, 8475933 - 8475771
Alignment:
| Q |
15 |
gagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattaggggttaactaggaga |
114 |
Q |
| |
|
||||| |||||||||||||||| |||||||||| || ||||| | ||||||||||||||||||||||||||||| ||||| || ||| |||||| | ||| |
|
|
| T |
8475933 |
gagatgttgaaaagttgtgactgtttagttttatcttcactatttattgtattgattgtattgattaatcttccctattatttggggattaactggaaga |
8475834 |
T |
|
| Q |
115 |
ctcctacctatataaatgtacactctcacaacataatatgatataat-aaacatattttcagt |
176 |
Q |
| |
|
||||| |||||||||||||| | |||| | | ||||||||| ||||| ||||||| ||||||| |
|
|
| T |
8475833 |
ctcctgcctatataaatgtaaattctccccatataatatgaaataataaaacataatttcagt |
8475771 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 43901190 - 43901125
Alignment:
| Q |
3 |
aagtacttagtggagatattgaaaagttgtgactatttagttttaactccactagtcattgtattg |
68 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43901190 |
aagtacttagtggagatattgaaaagttgtgactatttagttttaactccactagtcattgtattg |
43901125 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0167 (Bit Score: 179; Significance: 1e-96; HSPs: 1)
Name: scaffold0167
Description:
Target: scaffold0167; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 31756 - 31938
Alignment:
| Q |
1 |
tcaagtacttagtggagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattagg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31756 |
tcaagtacttagtggagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattagg |
31855 |
T |
|
| Q |
101 |
ggttaactaggagactcctacctatataaatgtacactctcacaacataatatgatataataaacatattttcagttctaata |
183 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31856 |
ggttaactagcagactcctacctatataaatgtacactctcacaacataatatgatataataaacatattttcagttctaata |
31938 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 179; Significance: 1e-96; HSPs: 17)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 42109755 - 42109937
Alignment:
| Q |
1 |
tcaagtacttagtggagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattagg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42109755 |
tcaagtacttagtggagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattagg |
42109854 |
T |
|
| Q |
101 |
ggttaactaggagactcctacctatataaatgtacactctcacaacataatatgatataataaacatattttcagttctaata |
183 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42109855 |
ggttaactaggagactcctacctatataaatgtacactctcaccacataatatgatataataaacatattttcagttctaata |
42109937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 42104765 - 42104947
Alignment:
| Q |
1 |
tcaagtacttagtggagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattagg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42104765 |
tcaagtacttagtggagatattgaaaagttgtgactatttagttttaactccactagtcattttattgattgtattgattaatcttccttattaattagg |
42104864 |
T |
|
| Q |
101 |
ggttaactaggagactcctacctatataaatgtacactctcacaacataatatgatataataaacatattttcagttctaata |
183 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42104865 |
ggttaactaggagactcctacctatataaatgtacactctcaccacataatatgatataataaacatattttcagttctaata |
42104947 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 48509140 - 48508958
Alignment:
| Q |
1 |
tcaagtacttagtggagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattagg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48509140 |
tcaagtacttagtggagatattgaaaagttgtgactatttagtttcaactccactagccattgtattgattgtattgattaatcttccttattaattagg |
48509041 |
T |
|
| Q |
101 |
ggttaactaggagactcctacctatataaatgtacactctcacaacataatatgatataataaacatattttcagttctaata |
183 |
Q |
| |
|
||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48509040 |
ggttaactaggagactcttacttatataaatgtacactctcaccacataatatgatataataaacatattttcagttctaata |
48508958 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 48513984 - 48513802
Alignment:
| Q |
1 |
tcaagtacttagtggagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattagg |
100 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48513984 |
tcaagtacttaatggagatattgaaaagttgtgactatttagtttcaactccactagccattgtattgattgtattgattaatcttccttattaattagg |
48513885 |
T |
|
| Q |
101 |
ggttaactaggagactcctacctatataaatgtacactctcacaacataatatgatataataaacatattttcagttctaata |
183 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48513884 |
ggttaactaggagactcttacctatataaatgtacactctcaccacataatatgatataataaacatattttcagttctaata |
48513802 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 48728438 - 48728256
Alignment:
| Q |
1 |
tcaagtacttagtggagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattagg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
48728438 |
tcaagtacttagtggagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattaag |
48728339 |
T |
|
| Q |
101 |
ggttaactaggagactcctacctatataaatgtacactctcacaacataatatgatataataaacatattttcagttctaata |
183 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
48728338 |
ggttaactaggaggctcctacctatataaatgtacattctcaccacataatatgatataataaacttattttcagttctaata |
48728256 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 3714059 - 3713886
Alignment:
| Q |
1 |
tcaagtacttagtggagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattagg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
3714059 |
tcaagtacttagtggagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgatt---------aatcttccttattaattagg |
3713969 |
T |
|
| Q |
101 |
ggttaactaggagactcctacctatataaatgtacactctcacaacataatatgatataataaacatattttcagttctaata |
183 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3713968 |
ggttaactaggagactcctacctatataaatgtacactctcaccacataatatgatataataaacatattttcagttctaata |
3713886 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 19 - 183
Target Start/End: Complemental strand, 3718771 - 3718607
Alignment:
| Q |
19 |
tattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattaggggttaactaggagactcc |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| |
|
|
| T |
3718771 |
tattgaaaagttgtgactatttagttttaacttcactggtcattgtattgattgtattgattaatcttccttattaattaagggttaattaggagactcc |
3718672 |
T |
|
| Q |
119 |
tacctatataaatgtacactctcacaacataatatgatataataaacatattttcagttctaata |
183 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3718671 |
tacctatataaatgtacactctcaccacataatatgatataataaacatattttcagttctaata |
3718607 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 48723566 - 48723393
Alignment:
| Q |
1 |
tcaagtacttagtggagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattagg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |
|
|
| T |
48723566 |
tcaagtacttagtggagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgatt---------aatctaccttattaattagg |
48723476 |
T |
|
| Q |
101 |
ggttaactaggagactcctacctatataaatgtacactctcacaacataatatgatataataaacatattttcagttctaata |
183 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
48723475 |
ggttaactaggagactcctacctatataaatgtacactctcaccacataatatgatataataaacttattttcagttctaata |
48723393 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 15 - 176
Target Start/End: Complemental strand, 45182238 - 45182076
Alignment:
| Q |
15 |
gagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattaggggttaactaggaga |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
45182238 |
gagatattgaaaagttgtgactatttagttttaacttcactatttattgtattgattgtattgattaatcttccttattaattagggattaactaggaga |
45182139 |
T |
|
| Q |
115 |
ctcctacctatataaatgtacactctcacaacataatatgatat-aataaacatattttcagt |
176 |
Q |
| |
|
|||||||| ||||||||||||| |||| | ||||||| |||||| || ||||||||||||||| |
|
|
| T |
45182138 |
ctcctacccatataaatgtacattctccctacataatttgatatgaaaaaacatattttcagt |
45182076 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 15 - 176
Target Start/End: Complemental strand, 37981226 - 37981065
Alignment:
| Q |
15 |
gagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattaggggttaactaggaga |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||| | ||||||||| |||||||||||||||||||||||||||||||| |||||||||| | |
|
|
| T |
37981226 |
gagatattgaaaagttgtgactatttagttttaacttcactatttattgtattggttgtattgattaatcttccttattaattagggattaactaggaaa |
37981127 |
T |
|
| Q |
115 |
ctcctacctatataaatgtacactctcacaacataatatgatataataaacatattttcagt |
176 |
Q |
| |
|
|||||||| ||||||||||||| |||| | ||||||| |||||| ||||||||||||||||| |
|
|
| T |
37981126 |
ctcctacccatataaatgtacattctccccacataatttgatatgataaacatattttcagt |
37981065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 15 - 176
Target Start/End: Complemental strand, 45187796 - 45187634
Alignment:
| Q |
15 |
gagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattaggggttaactaggaga |
114 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
45187796 |
gagatattcaaaagttgtgactatttagttttaacttcactatttattgtattgattgtattgattaatcttccttattaattagggattaactaggaga |
45187697 |
T |
|
| Q |
115 |
ctcctacctatataaatgtacactctcacaacataatatgatat-aataaacatattttcagt |
176 |
Q |
| |
|
|||||||| ||||||||||||| |||| | ||||||| |||||| || ||||||||||||||| |
|
|
| T |
45187696 |
ctcctacccatataaatgtacattctccccacataatttgatatgaaaaaacatattttcagt |
45187634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 15 - 176
Target Start/End: Original strand, 993393 - 993554
Alignment:
| Q |
15 |
gagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattaggggttaactaggaga |
114 |
Q |
| |
|
|||||||||||||||||||||| |||||||||| || ||||| | ||||||||||||||||||||||||||||| |||||||| ||| |||||||||||| |
|
|
| T |
993393 |
gagatattgaaaagttgtgactgtttagttttatcttcactatttattgtattgattgtattgattaatcttccctattaattggggattaactaggaga |
993492 |
T |
|
| Q |
115 |
ctcctacctatataaatgtacactctcacaacataatatgatataataaacatattttcagt |
176 |
Q |
| |
|
||||| |||||||||||||||| |||| | ||||||||||| ||||||||||||||| |||| |
|
|
| T |
993493 |
ctcctgcctatataaatgtacattctccccacataatatgacataataaacatatttccagt |
993554 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 15 - 177
Target Start/End: Complemental strand, 42357079 - 42356926
Alignment:
| Q |
15 |
gagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattaggggttaactaggaga |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
42357079 |
gagatattgaaaagttgtgactatttagttttaacttcacta---------tttattgtattgattaatcttccttattaattagggattaactaggaga |
42356989 |
T |
|
| Q |
115 |
ctcctacctatataaatgtacactctcacaacataatatgatataataaacatattttcagtt |
177 |
Q |
| |
|
|||| ||| |||||||| |||| |||| | ||||||| |||||| |||||||||||||||||| |
|
|
| T |
42356988 |
ctccaacccatataaatatacattctccccacataatttgatatgataaacatattttcagtt |
42356926 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 15 - 172
Target Start/End: Complemental strand, 42360691 - 42360543
Alignment:
| Q |
15 |
gagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattaggggttaactaggaga |
114 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||| ||||| || |||||||||||||||||| |||||||||||||| |||||||||| | |
|
|
| T |
42360691 |
gagatattgaaaagttgtgactgtttagttttaacttcacta---------tttattgtattgattaatcttacttattaattagggattaactaggata |
42360601 |
T |
|
| Q |
115 |
ctcctacctatataaatgtacactctcacaacataatatgatataataaacatatttt |
172 |
Q |
| |
|
||||||| ||||||||||||| |||| | ||||||| |||||| ||||||||||||| |
|
|
| T |
42360600 |
ttcctacccatataaatgtacattctccccacataatttgatatgataaacatatttt |
42360543 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 48728537 - 48728481
Alignment:
| Q |
1 |
tcaagtacttagtggagatattgaaaagttgtgactatttagttttaactccactag |
57 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48728537 |
tcaagtacttagtggagatattgaaaagttgtgactatttagttttaactccactag |
48728481 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 48728636 - 48728580
Alignment:
| Q |
1 |
tcaagtacttagtggagatattgaaaagttgtgactatttagttttaactccactag |
57 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48728636 |
tcaagtacttagtggagatattgaaaagttgtgactatttagttttaactccactag |
48728580 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 176
Target Start/End: Complemental strand, 40124293 - 40124141
Alignment:
| Q |
15 |
gagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattaggggttaactaggaga |
114 |
Q |
| |
|
|||||||||||||||||||||| |||||||||| || ||||| || |||||||||||||||||||| ||| |||| ||| |||| ||||||| |
|
|
| T |
40124293 |
gagatattgaaaagttgtgactgtttagttttatcttcacta---------tttattgtattgattaatcttccctat-aattggggattaaataggaga |
40124204 |
T |
|
| Q |
115 |
ctcctacctatataaatgtaca-ctctcacaacataatatgatataataaacatattttcagt |
176 |
Q |
| |
|
||||| ||||||||||| |||| |||| | ||||||||| |||||||||||||||||||| |
|
|
| T |
40124203 |
ctcctgcctatataaatttacatttctcccctcataatatgtgataataaacatattttcagt |
40124141 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 175; Significance: 3e-94; HSPs: 15)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 20203494 - 20203676
Alignment:
| Q |
1 |
tcaagtacttagtggagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattagg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20203494 |
tcaagtacttagtggagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattagg |
20203593 |
T |
|
| Q |
101 |
ggttaactaggagactcctacctatataaatgtacactctcacaacataatatgatataataaacatattttcagttctaata |
183 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20203594 |
ggttaactaggagactcctacctatataaatatacactctcaccacataatatgatataataaacatattttcagttctaata |
20203676 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 171; E-Value: 8e-92
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 29886679 - 29886861
Alignment:
| Q |
1 |
tcaagtacttagtggagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattagg |
100 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
29886679 |
tcaagtacttagtggagataatgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtgttgattaatcttccttattaattagg |
29886778 |
T |
|
| Q |
101 |
ggttaactaggagactcctacctatataaatgtacactctcacaacataatatgatataataaacatattttcagttctaata |
183 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29886779 |
ggttaactaggagactcctacctatataaatgtacactctcaccacataatatgatataataaacatattttcagttctaata |
29886861 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 20154598 - 20154416
Alignment:
| Q |
1 |
tcaagtacttagtggagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattagg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20154598 |
tcaagtacttagtggagatattgaaaagttgtgactatttagtttcaactccactagccattgtattgattgtattgattaatcttccttattaattagg |
20154499 |
T |
|
| Q |
101 |
ggttaactaggagactcctacctatataaatgtacactctcacaacataatatgatataataaacatattttcagttctaata |
183 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20154498 |
ggttaactaggagactcttacctatataaatgtacactctcaccacataatatgatataataaacatattttcagttctaata |
20154416 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 52604751 - 52604569
Alignment:
| Q |
1 |
tcaagtacttagtggagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattagg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
52604751 |
tcaagtacttagtggagatattgaaaagttgtgactatttagtttcaactccactagccattgtattgattgtattgattaatcttccttattaattagg |
52604652 |
T |
|
| Q |
101 |
ggttaactaggagactcctacctatataaatgtacactctcacaacataatatgatataataaacatattttcagttctaata |
183 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
52604651 |
ggttaactaggagactcttacctatataaatgtacactctcaccacataatatgatataataaacatattttcagttctaata |
52604569 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 52609562 - 52609380
Alignment:
| Q |
1 |
tcaagtacttagtggagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattagg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
52609562 |
tcaagtacttagtggagatattgaaaagttgtgactatttagtttcaactccactagccattgtattgattgtattgattaatcttccttattaattagg |
52609463 |
T |
|
| Q |
101 |
ggttaactaggagactcctacctatataaatgtacactctcacaacataatatgatataataaacatattttcagttctaata |
183 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
52609462 |
ggttaactaggagactcttacctatataaatgtacactctcaccacataatatgatataataaacatattttcagttctaata |
52609380 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 29891419 - 29891592
Alignment:
| Q |
1 |
tcaagtacttagtggagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattagg |
100 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
29891419 |
tcaagtacttggtggagatattgaaaagttgtgactatttagttttaactccactagtcattg---------tattgattaatcttccttattaattagg |
29891509 |
T |
|
| Q |
101 |
ggttaactaggagactcctacctatataaatgtacactctcacaacataatatgatataataaacatattttcagttctaata |
183 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
29891510 |
ggttaactaggagactcctacctatataaatgtacactctcaccacataatatgatataatgaacatattttcagttctaata |
29891592 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 52887459 - 52887631
Alignment:
| Q |
1 |
tcaagtacttagtggagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattagg |
100 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |
|
|
| T |
52887459 |
tcaagtactttgtggagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgatt---------aatctttcttattaattagg |
52887549 |
T |
|
| Q |
101 |
ggttaactaggagactcctacctatataaatgtacactctcacaacataatatgatataataaacatattttcagttctaata |
183 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
52887550 |
ggttaactaggagactcctacc-atataaatgtacactctcaccacataatatgagataataaacatattttcagttctaata |
52887631 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 52890672 - 52890829
Alignment:
| Q |
1 |
tcaagtacttagtggagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattagg |
100 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
52890672 |
tcaaatacttagtggagatattgaaaagttgtgactatttagttttaactccactagtc---------attgtattgattaatcttccttattaattagg |
52890762 |
T |
|
| Q |
101 |
ggttaactaggagactcctacctatataaatgtacactctcacaacataatatgatataataaacatattttcagttctaata |
183 |
Q |
| |
|
||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
52890763 |
ggttaactaggagactcct----------------actctcaccacataatatgatataataaacatattttcagttctaata |
52890829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 69 - 176
Target Start/End: Original strand, 19807286 - 19807393
Alignment:
| Q |
69 |
attgtattgattaatcttccttattaattaggggttaactaggagactcctacctatataaatgtacactctcacaacataatatgatataataaacata |
168 |
Q |
| |
|
|||||||||||||||||||| |||||||| || ||||||||||| ||||| |||||||||||||||| |||| | ||||||||| |||||||||||||| |
|
|
| T |
19807286 |
attgtattgattaatcttccctattaattgaggattaactaggaggctcctgcctatataaatgtacattctccccacataatataatataataaacata |
19807385 |
T |
|
| Q |
169 |
ttttcagt |
176 |
Q |
| |
|
|||||||| |
|
|
| T |
19807386 |
ttttcagt |
19807393 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 90 - 183
Target Start/End: Original strand, 8900938 - 8901031
Alignment:
| Q |
90 |
tattaattaggggttaactaggagactcctacctatataaatgtacactctcacaacataatatgatataataaacatattttcagttctaata |
183 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||| |||| |||||||| || |||||||||||| |||||||||||||| |
|
|
| T |
8900938 |
tattaattaggagttaactaggagactcctacctatataaatgtacattctccttacataatacgacataataaacataatttcagttctaata |
8901031 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 141
Target Start/End: Original strand, 14635152 - 14635229
Alignment:
| Q |
64 |
tattgattgtattgattaatcttccttattaattaggggttaactaggagactcctacctatataaatgtacactctc |
141 |
Q |
| |
|
|||| |||||||||||||||||||| |||||||| ||| ||||||||||||| ||| |||||||||||||||| |||| |
|
|
| T |
14635152 |
tatttattgtattgattaatcttccctattaattggggattaactaggagacccctgcctatataaatgtacattctc |
14635229 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 15 - 71
Target Start/End: Original strand, 8900730 - 8900786
Alignment:
| Q |
15 |
gagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgatt |
71 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||| || | |||||||||||| |
|
|
| T |
8900730 |
gagatattgaaaagttgtgactatttagtttgaactccgttatttattgtattgatt |
8900786 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 15 - 71
Target Start/End: Original strand, 19932640 - 19932696
Alignment:
| Q |
15 |
gagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgatt |
71 |
Q |
| |
|
|||||| ||||||||||||||| |||||||||| |||||||| | |||||||||||| |
|
|
| T |
19932640 |
gagatactgaaaagttgtgactgtttagttttatctccactatttattgtattgatt |
19932696 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 152
Target Start/End: Original strand, 19932694 - 19932755
Alignment:
| Q |
91 |
attaattaggggttaactaggagactcctacctatataaatgtacactctcacaacataata |
152 |
Q |
| |
|
||||||| ||| ||||||||||||||||| ||| |||||||| ||| |||| | |||||||| |
|
|
| T |
19932694 |
attaattggggattaactaggagactcctgcctgtataaatgaacattctccccacataata |
19932755 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 47
Target Start/End: Original strand, 19807241 - 19807273
Alignment:
| Q |
15 |
gagatattgaaaagttgtgactatttagtttta |
47 |
Q |
| |
|
|||||||||||||||||||||| |||||||||| |
|
|
| T |
19807241 |
gagatattgaaaagttgtgactgtttagtttta |
19807273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0014 (Bit Score: 171; Significance: 8e-92; HSPs: 3)
Name: scaffold0014
Description:
Target: scaffold0014; HSP #1
Raw Score: 171; E-Value: 8e-92
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 143444 - 143626
Alignment:
| Q |
1 |
tcaagtacttagtggagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattagg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
143444 |
tcaagtacttagtggagatattgaaaagttgttactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattagg |
143543 |
T |
|
| Q |
101 |
ggttaactaggagactcctacctatataaatgtacactctcacaacataatatgatataataaacatattttcagttctaata |
183 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
143544 |
ggttaactaggagactcctacctatataaatgtacactctcaccacataatatgacataataaacatattttcagttctaata |
143626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0014; HSP #2
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 173250 - 173432
Alignment:
| Q |
1 |
tcaagtacttagtggagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattagg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
173250 |
tcaagtacttagtggagatattgaaaagttgtgactatttagtttcaactccactagccattgtattgattgtattgattaatcttccttattaattagg |
173349 |
T |
|
| Q |
101 |
ggttaactaggagactcctacctatataaatgtacactctcacaacataatatgatataataaacatattttcagttctaata |
183 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
173350 |
ggttaactaggagactcttacctatataaatgtacactctcaccacataatatgatataataaacatattttcagttctaata |
173432 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0014; HSP #3
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 3 - 183
Target Start/End: Original strand, 163952 - 164123
Alignment:
| Q |
3 |
aagtacttagtggagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattagggg |
102 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| |
|
|
| T |
163952 |
aagtacttagtggagatattgaaaagttgtgactatttagttttaactccactagtcattg---------tattgattgatcttccttattaattagggg |
164042 |
T |
|
| Q |
103 |
ttaactaggagactcctacctatataaatgtacactctcacaacataatatgatataataaacatattttcagttctaata |
183 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
164043 |
ttaactaggagactcctacctatataaatgtacactctcaccacataatatgacataataaacatattttcagttctaata |
164123 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 171; Significance: 8e-92; HSPs: 11)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 171; E-Value: 8e-92
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 46073077 - 46073259
Alignment:
| Q |
1 |
tcaagtacttagtggagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattagg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
46073077 |
tcaagtacttagtggagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgaattgattaatcttccttattaattagg |
46073176 |
T |
|
| Q |
101 |
ggttaactaggagactcctacctatataaatgtacactctcacaacataatatgatataataaacatattttcagttctaata |
183 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
46073177 |
ggttaaccaggagactcctacctatataaatgtacactctcaccacataatatgatataataaacatattttcagttctaata |
46073259 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 171; E-Value: 8e-92
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 55488369 - 55488551
Alignment:
| Q |
1 |
tcaagtacttagtggagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattagg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |
|
|
| T |
55488369 |
tcaagtacttagtggagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatctttcttattaattatg |
55488468 |
T |
|
| Q |
101 |
ggttaactaggagactcctacctatataaatgtacactctcacaacataatatgatataataaacatattttcagttctaata |
183 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
55488469 |
ggttaactaggagactcctacctatataaatgtacactctcaccacataatatgatataataaacatattttcagttctaata |
55488551 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 38323399 - 38323217
Alignment:
| Q |
1 |
tcaagtacttagtggagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattagg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38323399 |
tcaagtacttagtggagatattgaaaagttgtgactatttagtttcaactccactagccattgtattgattgtattgattaatcttccttattaattagg |
38323300 |
T |
|
| Q |
101 |
ggttaactaggagactcctacctatataaatgtacactctcacaacataatatgatataataaacatattttcagttctaata |
183 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38323299 |
ggttaactaggagactcttacctatataaatgtacactctcaccacataatatgatataataaacatattttcagttctaata |
38323217 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 46077666 - 46077848
Alignment:
| Q |
1 |
tcaagtacttagtggagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattagg |
100 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
46077666 |
tcaagtagttagtggagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgatattattgattaatcttccttattaattagg |
46077765 |
T |
|
| Q |
101 |
ggttaactaggagactcctacctatataaatgtacactctcacaacataatatgatataataaacatattttcagttctaata |
183 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
46077766 |
ggttaactaggagactcctacctatataaatgtacactctcaccacataatatgatataataaacatattttcagttctaata |
46077848 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 33823131 - 33822951
Alignment:
| Q |
1 |
tcaagtacttagtggagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattagg |
100 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33823131 |
tcaagtacttagtagagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattagg |
33823032 |
T |
|
| Q |
101 |
ggttaactaggagactcctacctatataaatgtacactctcacaacataatatgatataataaacatattttcagttctaata |
183 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
33823031 |
ggttaactagaagactcctacctatataaatgtacactctcatcacataatatgatataataa--atattttcagttctaata |
33822951 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 55493192 - 55493360
Alignment:
| Q |
1 |
tcaagtacttagtggagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattagg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
55493192 |
tcaagtacttagtggagatattgaaaagttgtgactatttagttttaactccactagtcattg---------tattgattaatcttccttattaattagg |
55493282 |
T |
|
| Q |
101 |
ggttaactaggagactcctacctatataaatgtacactctcacaacataatatgatataataaacatattttcagttct |
179 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
55493283 |
ggttaactaggagactcctacctata-aaatgtacactctcaccacataatatgatataataaacatattttcagttct |
55493360 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 44742840 - 44742700
Alignment:
| Q |
1 |
tcaagtacttagtggagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattagg |
100 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
44742840 |
tcaagtacttagtggagatattggaaagttgtgactatttagttttaactccactagtcattgtattgattgtgttgattaatcttccttattaattagg |
44742741 |
T |
|
| Q |
101 |
ggttaactaggagactcctacctatataaatgtacactctc |
141 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||| |||| |
|
|
| T |
44742740 |
agttaactaggagactcctacctatatgaatgtacattctc |
44742700 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 15 - 176
Target Start/End: Original strand, 36501057 - 36501218
Alignment:
| Q |
15 |
gagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattaggggttaactaggaga |
114 |
Q |
| |
|
||||||||| ||||||||||||||||||||| |||| ||||| | |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
36501057 |
gagatattggaaagttgtgactatttagtttcaacttcactatttattgtattgattgtattgattagtcttccttattaattaggggttaactaggaga |
36501156 |
T |
|
| Q |
115 |
ctcctacctatataaatgtacactctcacaacataatatgatataataaacatattttcagt |
176 |
Q |
| |
|
|||||||| ||||||||||||| || | | ||||||| |||||| | ||||||||||||||| |
|
|
| T |
36501157 |
ctcctacccatataaatgtacattcaccccacataatttgatatgagaaacatattttcagt |
36501218 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 15 - 176
Target Start/End: Original strand, 36497438 - 36497599
Alignment:
| Q |
15 |
gagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattaggggttaactaggaga |
114 |
Q |
| |
|
||||||||| |||||||||||||||||||| ||||| ||||| | ||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
36497438 |
gagatattggaaagttgtgactatttagttctaacttcactatttattgtattgattggattgattagtcttccttattaattaggggttaactaggaga |
36497537 |
T |
|
| Q |
115 |
ctcctacctatataaatgtacactctcacaacataatatgatataataaacatattttcagt |
176 |
Q |
| |
|
|||||||| ||||||||||||| || | | ||||||| |||||| | ||||||||||||||| |
|
|
| T |
36497538 |
ctcctacccatataaatgtacattcaccccacataatttgatatgagaaacatattttcagt |
36497599 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 119 - 183
Target Start/End: Original strand, 38328109 - 38328173
Alignment:
| Q |
119 |
tacctatataaatgtacactctcacaacataatatgatataataaacatattttcagttctaata |
183 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38328109 |
tacctatataaatgtacactctcaccacataatatgatataataaacatattttcagttctaata |
38328173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 64 - 128
Target Start/End: Original strand, 11901855 - 11901919
Alignment:
| Q |
64 |
tattgattgtattgattaatcttccttattaattaggggttaactaggagactcctacctatata |
128 |
Q |
| |
|
|||| |||||||||||||||||||| |||| ||| ||| ||||||||||| ||||| |||||||| |
|
|
| T |
11901855 |
tatttattgtattgattaatcttccctattgattggggattaactaggaggctcctgcctatata |
11901919 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 167; Significance: 2e-89; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 29651512 - 29651694
Alignment:
| Q |
1 |
tcaagtacttagtggagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattagg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29651512 |
tcaagtacttagtggagatattgaaaagttgtgactatttagtttcaactccactagccattgtattgattgtattgattaatcttccttattaattagg |
29651611 |
T |
|
| Q |
101 |
ggttaactaggagactcctacctatataaatgtacactctcacaacataatatgatataataaacatattttcagttctaata |
183 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29651612 |
ggttaactaggagactcttacctatataaatgtacactctcaccacataatatgatataataaacatattttcagttctaata |
29651694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 29656356 - 29656538
Alignment:
| Q |
1 |
tcaagtacttagtggagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattagg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29656356 |
tcaagtacttagtggagatattgaaaagttgtgactatttagtttcaactccactagccattgtattgattgtattgattaatcttccttattaattagg |
29656455 |
T |
|
| Q |
101 |
ggttaactaggagactcctacctatataaatgtacactctcacaacataatatgatataataaacatattttcagttctaata |
183 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29656456 |
ggttaactaggagactcttacctatataaatgtacactctcaccacataatatgatataataaacatattttcagttctaata |
29656538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 26846743 - 26846592
Alignment:
| Q |
1 |
tcaagtacttagtggagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattagg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
26846743 |
tcaagtacttagtggagatattgaaaagttgtgactatttagttttaactccaccaatcattgtattcattgtattgattaatcttccttattaattagg |
26846644 |
T |
|
| Q |
101 |
ggttaactaggagactcctacctatataaatgtacactctcacaacataata |
152 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||| |||||| |||||||| |
|
|
| T |
26846643 |
ggttaactagaagactcctacctatataaatgtacattctcaccacataata |
26846592 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 167; Significance: 2e-89; HSPs: 10)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 36674671 - 36674489
Alignment:
| Q |
1 |
tcaagtacttagtggagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattagg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36674671 |
tcaagtacttagtggagatattgaaaagttgtgactatttagtttcaactccactagccattgtattgattgtattgattaatcttccttattaattagg |
36674572 |
T |
|
| Q |
101 |
ggttaactaggagactcctacctatataaatgtacactctcacaacataatatgatataataaacatattttcagttctaata |
183 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36674571 |
ggttaactaggagactcttacctatataaatgtacactctcaccacataatatgatataataaacatattttcagttctaata |
36674489 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 36679515 - 36679333
Alignment:
| Q |
1 |
tcaagtacttagtggagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattagg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36679515 |
tcaagtacttagtggagatattgaaaagttgtgactatttagtttcaactccactagccattgtattgattgtattgattaatcttccttattaattagg |
36679416 |
T |
|
| Q |
101 |
ggttaactaggagactcctacctatataaatgtacactctcacaacataatatgatataataaacatattttcagttctaata |
183 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36679415 |
ggttaactaggagactcttacctatataaatgtacactctcaccacataatatgatataataaacatattttcagttctaata |
36679333 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 36662263 - 36662442
Alignment:
| Q |
1 |
tcaagtacttagtggagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattagg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36662263 |
tcaagtacttagtggagatattgaaaagttctgactatttagtttcaactccactagtcattgtattgattgtattgattaatcttccttattaattagg |
36662362 |
T |
|
| Q |
101 |
ggttaactaggagactcctacctatataaatgtacactctcacaacataatatgatataataaacatattttcagttcta |
180 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
36662363 |
ggttaactaggagactcttacctatataaatgtacactctcaccacataatatgatataataaacatattttcagttcta |
36662442 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 36667104 - 36667283
Alignment:
| Q |
1 |
tcaagtacttagtggagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattagg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36667104 |
tcaagtacttagtggagatattgaaaagttctgactatttagtttcaactccactagccattgtattgattgtattgattaatcttccttattaattagg |
36667203 |
T |
|
| Q |
101 |
ggttaactaggagactcctacctatataaatgtacactctcacaacataatatgatataataaacatattttcagttcta |
180 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
36667204 |
ggttaactaggagactcttacctatataaatgtacactctcaccacataatatgatataataaacatattttcagttcta |
36667283 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 43559911 - 43560094
Alignment:
| Q |
1 |
tcaagtacttagtggagatattgaaaag-ttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattag |
99 |
Q |
| |
|
|||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
43559911 |
tcaagtacttcgtggagatattgaaaagattgtgactatttagttttaactccactagtcattgtattgattgtgttgattaatcttccttattaattag |
43560010 |
T |
|
| Q |
100 |
gggttaactaggagactcctacctatataaatgtacactctcacaacataatatgatataataaacatattttcagttctaata |
183 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43560011 |
gggttaactaggagactcctacctatataaatgtacattctcaccgcataatatgatataataaacatattttcagttctaata |
43560094 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 43564543 - 43564726
Alignment:
| Q |
1 |
tcaagtacttagtggagatattgaaaag-ttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattag |
99 |
Q |
| |
|
||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||| |
|
|
| T |
43564543 |
tcaagtacttagtggcgatattgaaaagattgtgactatttagttttaactccactagtcattgtgttggttgtgttgattaatcttccttattaattag |
43564642 |
T |
|
| Q |
100 |
gggttaactaggagactcctacctatataaatgtacactctcacaacataatatgatataataaacatattttcagttctaata |
183 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43564643 |
gggttaactaggagactcctacctatataaatgtacattctcaccacataatatgatataataaacatattttcagttctaata |
43564726 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 3 - 183
Target Start/End: Complemental strand, 23204295 - 23204124
Alignment:
| Q |
3 |
aagtacttagtggagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattagggg |
102 |
Q |
| |
|
|||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
23204295 |
aagtacgtagtggaaatattgaaaagttgtgactatttagttttaactccgctagtcattgtattgatt---------aatcttccttattaattagggg |
23204205 |
T |
|
| Q |
103 |
ttaactaggagactcctacctatataaatgtacactctcacaacataatatgatataataaacatattttcagttctaata |
183 |
Q |
| |
|
||| ||||||||||| |||||||||||||||||| |||||| | ||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
23204204 |
ttagctaggagactcttacctatataaatgtacattctcaccatataatataatataataaacatattttcagttctaata |
23204124 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 15 - 176
Target Start/End: Original strand, 27378775 - 27378938
Alignment:
| Q |
15 |
gagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattaggggttaactaggaga |
114 |
Q |
| |
|
|||||||||||||||||||||| |||||||||| || || | ||| ||||||||||||||||||||||||| | || ||| ||| ||||||| ||| |
|
|
| T |
27378775 |
gagatattgaaaagttgtgactgtttagttttatctttcatatttattatattgattgtattgattaatcttccctgttgattggggattaactaagagg |
27378874 |
T |
|
| Q |
115 |
ctcctacc--tatataaatgtacactctcacaacataatatgatataataaacatattttcagt |
176 |
Q |
| |
|
|||| || ||||||| |||||| ||| | |||||||| ||||||| |||||||||||||| |
|
|
| T |
27378875 |
ctccggcctatatataactgtacattctgcccacataatacaatataatgaacatattttcagt |
27378938 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 112
Target Start/End: Original strand, 4478475 - 4478563
Alignment:
| Q |
15 |
gagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattaggggttaactagga |
112 |
Q |
| |
|
|||||||||||||||||||||| |||||||||| || ||| |||| |||||||||||||||||||| |||||||| ||| |||||||||| |
|
|
| T |
4478475 |
gagatattgaaaagttgtgactgtttagttttatcttcac---------tatttattgtattgattaatcttccctattaattggggattaactagga |
4478563 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 176
Target Start/End: Original strand, 4478567 - 4478611
Alignment:
| Q |
132 |
gtacactctcacaacataatatgatataataaacatattttcagt |
176 |
Q |
| |
|
||||| |||| | |||||||||||| ||||||||||||||||||| |
|
|
| T |
4478567 |
gtacattctccccacataatatgatgtaataaacatattttcagt |
4478611 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 167; Significance: 2e-89; HSPs: 11)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 12509301 - 12509483
Alignment:
| Q |
1 |
tcaagtacttagtggagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattagg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12509301 |
tcaagtacttagtggagatattgaaaagttgtgactatttagtttcaactccactagccattgtattgattgtattgattaatcttccttattaattagg |
12509400 |
T |
|
| Q |
101 |
ggttaactaggagactcctacctatataaatgtacactctcacaacataatatgatataataaacatattttcagttctaata |
183 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12509401 |
ggttaactaggagactcttacctatataaatgtacactctcaccacataatatgatataataaacatattttcagttctaata |
12509483 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 12504457 - 12504639
Alignment:
| Q |
1 |
tcaagtacttagtggagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattagg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12504457 |
tcaagtacttagtggagatattgaaaagttgtgactatttagtttcaactccactagccattgtattgattgtattgattaatcttccttattaattagg |
12504556 |
T |
|
| Q |
101 |
ggttaactaggagactcctacctatataaatgtacactctcacaacataatatgatataataaacatattttcagttctaata |
183 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12504557 |
ggttaactaggagactcttacctatataaatgtacactctcaccatataatatgatataataaacatattttcagttctaata |
12504639 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 35753361 - 35753543
Alignment:
| Q |
1 |
tcaagtacttagtggagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattagg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35753361 |
tcaagtacttagtggagatattgaaaagttctgactatttagtttcaactccactagccattgtattgattgtattgattaatcttccttattaattagg |
35753460 |
T |
|
| Q |
101 |
ggttaactaggagactcctacctatataaatgtacactctcacaacataatatgatataataaacatattttcagttctaata |
183 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35753461 |
ggttaactaggagactcttacctatataaatgtacactctcaccacataatatgatataataaacatattttcagttctaata |
35753543 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 14676625 - 14676443
Alignment:
| Q |
1 |
tcaagtacttagtggagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattagg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14676625 |
tcaagtacttagtggagatattgaaaagttctgactatttagtttcaactccactggccattgtattgattgtattgattaatcttccttattaattagg |
14676526 |
T |
|
| Q |
101 |
ggttaactaggagactcctacctatataaatgtacactctcacaacataatatgatataataaacatattttcagttctaata |
183 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14676525 |
ggttaactaggagactcttacctatataaatgtacactctcaccacataatatgatataataaacatattttcagttctaata |
14676443 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 14681469 - 14681287
Alignment:
| Q |
1 |
tcaagtacttagtggagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattagg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14681469 |
tcaagtacttagtggagatattgaaaagttctgactatttagtttcaactccactggccattgtattgattgtattgattaatcttccttattaattagg |
14681370 |
T |
|
| Q |
101 |
ggttaactaggagactcctacctatataaatgtacactctcacaacataatatgatataataaacatattttcagttctaata |
183 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14681369 |
ggttaactaggagactcttacctatataaatgtacactctcaccacataatatgatataataaacatattttcagttctaata |
14681287 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 39591741 - 39591892
Alignment:
| Q |
1 |
tcaagtacttagtggagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattagg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39591741 |
tcaagtacttagtggagatattgaaaagttgtaactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattagg |
39591840 |
T |
|
| Q |
101 |
ggttaactaggagactcctacctatataaatgtacactctcacaacataata |
152 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
39591841 |
ggttaactaggagactcctacctatataaatgtacactctcaccgcataata |
39591892 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 15 - 176
Target Start/End: Complemental strand, 4132518 - 4132365
Alignment:
| Q |
15 |
gagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattaggggttaactaggaga |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
4132518 |
gagatattgaaaagttgtgactatttagttttaacttcacta---------tttattgtattgattaatcttccttattaattagggattaactaggaga |
4132428 |
T |
|
| Q |
115 |
ctcctacctatataaatgtacactct-cacaacataatatgatataataaacatattttcagt |
176 |
Q |
| |
|
|||| ||| ||||||||||||| ||| | | |||||||||||||| ||||||||||||||||| |
|
|
| T |
4132427 |
ctcccacccatataaatgtacattctcccccacataatatgatatgataaacatattttcagt |
4132365 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 64 - 176
Target Start/End: Original strand, 26775589 - 26775701
Alignment:
| Q |
64 |
tattgattgtattgattaatcttccttattaattaggggttaactaggagactcctacctatataaatgtacactctcacaacataatatgatataataa |
163 |
Q |
| |
|
|||| ||||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||| |||| | |||||||||||||||||| |
|
|
| T |
26775589 |
tatttattgtattgattaatcttctttattaattagggattaactaggagagtcctacctatataaatgtacattctccccgcataatatgatataataa |
26775688 |
T |
|
| Q |
164 |
acatattttcagt |
176 |
Q |
| |
|
||||||||||||| |
|
|
| T |
26775689 |
acatattttcagt |
26775701 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 39587382 - 39587449
Alignment:
| Q |
1 |
tcaagtacttagtggagatattgaaaagttgtgactatttagttttaactccactagtcattgtattg |
68 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39587382 |
tcaagtacttagtggagatattgaaaagttgtgactatttagttttaactccactagtcattgtattg |
39587449 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 93 - 174
Target Start/End: Complemental strand, 32667645 - 32667563
Alignment:
| Q |
93 |
taattaggggttaactaggagactcctacctatataaatgtacactct-cacaacataatatgatataataaacatattttca |
174 |
Q |
| |
|
||||||||| | |||||||||||||||||| ||||||||||||| ||| | | |||||||||||||| || |||||||||||| |
|
|
| T |
32667645 |
taattagggatcaactaggagactcctacccatataaatgtacattctcccccacataatatgatatgattaacatattttca |
32667563 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 56
Target Start/End: Complemental strand, 32663097 - 32663056
Alignment:
| Q |
15 |
gagatattgaaaagttgtgactatttagttttaactccacta |
56 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| ||||| |
|
|
| T |
32663097 |
gagatattgaaaagttgtaactatttagttttaacttcacta |
32663056 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 160; Significance: 3e-85; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 56135289 - 56135106
Alignment:
| Q |
1 |
tcaagtacttagtggagatattgaaaag-ttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattag |
99 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || |
|
|
| T |
56135289 |
tcaagtacttagtggagatattgaaaagattgtgactatttagttttaactccactagtcattgtattgattgtgttgattaatcttccttattaataag |
56135190 |
T |
|
| Q |
100 |
gggttaactaggagactcctacctatataaatgtacactctcacaacataatatgatataataaacatattttcagttctaata |
183 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
56135189 |
gggttaactaggagactcctacctatataaatgtacattctcaccacataatatgatataataaacatattttcagttctaata |
56135106 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 15 - 176
Target Start/End: Original strand, 37073689 - 37073850
Alignment:
| Q |
15 |
gagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattaggggttaactaggaga |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| || || | |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
37073689 |
gagatattgaaaagttgtgactatttagttttaacttcaatatttattgtattgattgtattgattaatcttccttattaattagggattaactaggaga |
37073788 |
T |
|
| Q |
115 |
ctcctacctatataaatgtacactctcacaacataatatgatataataaacatattttcagt |
176 |
Q |
| |
|
|||| ||| ||||||||||||| | || | ||||||| |||||| ||||||||||||||||| |
|
|
| T |
37073789 |
ctcccacccatataaatgtacattttccccacataatttgatatgataaacatattttcagt |
37073850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 15 - 157
Target Start/End: Original strand, 28830403 - 28830545
Alignment:
| Q |
15 |
gagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattaggggttaactaggaga |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| || || | ||||||||||| ||||||||| |||||||||||||||||||| |||||||||||| |
|
|
| T |
28830403 |
gagatattgaaaagttgtgactatttagttttaacttcaatatttattgtattgatcgtattgattgatcttccttattaattagggattaactaggaga |
28830502 |
T |
|
| Q |
115 |
ctcctacctatataaatgtacactctcacaacataatatgata |
157 |
Q |
| |
|
|| ||||| ||||||||||||| |||| | ||||||||||||| |
|
|
| T |
28830503 |
cttctacccatataaatgtacattctccccacataatatgata |
28830545 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 15 - 175
Target Start/End: Original strand, 37077257 - 37077408
Alignment:
| Q |
15 |
gagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattaggggttaactaggaga |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
37077257 |
gagatattgaaaagttgtgactatttagttttaacttcacta---------tttattgtattgattaatcttccttattaattagggattaactaggaga |
37077347 |
T |
|
| Q |
115 |
ctcctacctatataaatgtacactctcacaacataatatgatataataaacatattttcag |
175 |
Q |
| |
|
|||||||| ||||||||||||| |||| | ||||||| |||||| |||||||||||||||| |
|
|
| T |
37077348 |
ctcctacccatataaatgtacattctccccacataatttgatatgataaacatattttcag |
37077408 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 15 - 176
Target Start/End: Original strand, 26549349 - 26549501
Alignment:
| Q |
15 |
gagatattgaaaagttgtgactatttagttttaactccactagtcattgtattgattgtattgattaatcttccttattaattaggggttaactaggaga |
114 |
Q |
| |
|
|||| ||||||||||| ||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
26549349 |
gagacattgaaaagttatgactatttagttttaact-------tcatt--atttattgtattgattaatcttccttattaattagggattaactaggaga |
26549439 |
T |
|
| Q |
115 |
ctcctacctatataaatgtacactctcacaacataatatgatataataaacatattttcagt |
176 |
Q |
| |
|
|||||||| |||||||| ||| |||| | | |||||||||||||| ||||||||||||||| |
|
|
| T |
26549440 |
ctcctacccatataaattaacattctccccatataatatgatataacaaacatattttcagt |
26549501 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 174
Target Start/End: Complemental strand, 46240605 - 46240552
Alignment:
| Q |
121 |
cctatataaatgtacactctcacaacataatatgatataataaacatattttca |
174 |
Q |
| |
|
|||||||||||||||| |||| |||||||||| |||| |||||||||||||| |
|
|
| T |
46240605 |
cctatataaatgtacattctcctcacataatatggtatattaaacatattttca |
46240552 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1270 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold1270
Description:
Target: scaffold1270; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 62 - 1
Alignment:
| Q |
1 |
tcaagtacttagtggagatattgaaaagttgtgactatttagttttaactccactagtcatt |
62 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
62 |
tcaagtagttagtggagatattgaaaagttgtgactatttagttttaactccactagtcatt |
1 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1284 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1284
Description:
Target: scaffold1284; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 183
Target Start/End: Original strand, 1 - 38
Alignment:
| Q |
146 |
cataatatgatataataaacatattttcagttctaata |
183 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1 |
cataatatgatataataaacatattttcagttctaata |
38 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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