View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10140A_low_166 (Length: 287)

Name: NF10140A_low_166
Description: NF10140A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10140A_low_166
NF10140A_low_166
[»] chr3 (22 HSPs)
chr3 (15-285)||(12100245-12100523)
chr3 (38-155)||(24204984-24205102)
chr3 (47-155)||(3730111-3730217)
chr3 (47-155)||(25074796-25074911)
chr3 (47-141)||(21149074-21149169)
chr3 (47-141)||(25365469-25365564)
chr3 (108-155)||(34185055-34185102)
chr3 (15-96)||(12704659-12704740)
chr3 (38-155)||(15864831-15864948)
chr3 (109-155)||(52369857-52369903)
chr3 (86-155)||(27505299-27505367)
chr3 (60-155)||(40993278-40993373)
chr3 (112-155)||(49651719-49651762)
chr3 (109-155)||(4987223-4987269)
chr3 (48-102)||(35994734-35994788)
chr3 (109-155)||(40052382-40052428)
chr3 (109-155)||(55401145-55401191)
chr3 (60-93)||(1830364-1830397)
chr3 (110-151)||(3631755-3631796)
chr3 (110-155)||(20503536-20503581)
chr3 (107-155)||(16789588-16789636)
chr3 (60-96)||(25892481-25892517)
[»] chr1 (20 HSPs)
chr1 (47-155)||(22794021-22794130)
chr1 (48-144)||(18190062-18190159)
chr1 (105-155)||(42359392-42359442)
chr1 (60-150)||(21145488-21145574)
chr1 (105-155)||(16297224-16297274)
chr1 (32-91)||(40747780-40747840)
chr1 (48-155)||(1486647-1486760)
chr1 (108-155)||(10233325-10233372)
chr1 (48-145)||(40181879-40181977)
chr1 (109-155)||(113363-113409)
chr1 (60-98)||(6936400-6936438)
chr1 (109-155)||(9828125-9828171)
chr1 (60-155)||(20157287-20157388)
chr1 (109-155)||(40917830-40917876)
chr1 (115-155)||(7918157-7918197)
chr1 (60-155)||(11412710-11412806)
chr1 (109-157)||(11634064-11634112)
chr1 (60-155)||(18337350-18337445)
chr1 (107-155)||(21365995-21366043)
chr1 (48-102)||(36878469-36878525)
[»] chr7 (18 HSPs)
chr7 (60-144)||(12278856-12278940)
chr7 (109-155)||(32287406-32287452)
chr7 (112-155)||(24339726-24339769)
chr7 (109-155)||(5409774-5409820)
chr7 (86-155)||(9778553-9778621)
chr7 (47-155)||(23751907-23752015)
chr7 (106-155)||(35749954-35750003)
chr7 (34-96)||(29812666-29812729)
chr7 (86-153)||(43250051-43250118)
chr7 (109-155)||(598278-598324)
chr7 (109-155)||(6490786-6490832)
chr7 (109-155)||(17852070-17852116)
chr7 (109-155)||(43027407-43027453)
chr7 (48-155)||(20549799-20549907)
chr7 (60-96)||(17780086-17780122)
chr7 (60-92)||(18233604-18233636)
chr7 (60-96)||(23930240-23930276)
chr7 (110-154)||(40287306-40287350)
[»] chr6 (13 HSPs)
chr6 (60-156)||(12235461-12235557)
chr6 (104-155)||(9107302-9107353)
chr6 (108-155)||(31959219-31959266)
chr6 (109-155)||(8389411-8389457)
chr6 (48-155)||(34595142-34595250)
chr6 (48-155)||(28152107-28152214)
chr6 (47-155)||(34446572-34446687)
chr6 (109-155)||(8776911-8776957)
chr6 (33-130)||(13689161-13689259)
chr6 (109-155)||(9025448-9025494)
chr6 (47-96)||(12086347-12086397)
chr6 (47-96)||(17168465-17168515)
chr6 (60-127)||(4420149-4420217)
[»] chr5 (14 HSPs)
chr5 (47-155)||(18586232-18586340)
chr5 (47-132)||(7997132-7997218)
chr5 (48-155)||(21190999-21191107)
chr5 (60-132)||(21137710-21137786)
chr5 (110-155)||(38464316-38464361)
chr5 (60-129)||(26205723-26205798)
chr5 (108-156)||(39268540-39268588)
chr5 (109-155)||(2419937-2419983)
chr5 (47-96)||(5467980-5468030)
chr5 (109-155)||(14873592-14873638)
chr5 (109-150)||(17088361-17088402)
chr5 (110-155)||(19820331-19820376)
chr5 (48-96)||(31264446-31264495)
chr5 (47-98)||(18607097-18607149)
[»] chr8 (11 HSPs)
chr8 (47-155)||(30067971-30068080)
chr8 (47-155)||(39820436-39820544)
chr8 (109-155)||(29510236-29510282)
chr8 (105-152)||(40064028-40064075)
chr8 (47-92)||(14692467-14692512)
chr8 (86-155)||(44067574-44067643)
chr8 (60-155)||(1676733-1676828)
chr8 (108-155)||(22652056-22652103)
chr8 (48-155)||(3025559-3025667)
chr8 (86-155)||(16641912-16641980)
chr8 (99-155)||(16987973-16988029)
[»] scaffold0652 (1 HSPs)
scaffold0652 (48-155)||(405-513)
[»] chr4 (15 HSPs)
chr4 (38-155)||(24343505-24343629)
chr4 (92-155)||(53381533-53381596)
chr4 (47-155)||(18513178-18513293)
chr4 (60-144)||(39507073-39507157)
chr4 (109-155)||(3947704-3947750)
chr4 (109-155)||(23292929-23292975)
chr4 (115-155)||(40784029-40784069)
chr4 (38-96)||(20743280-20743339)
chr4 (109-156)||(28084594-28084641)
chr4 (109-155)||(19482749-19482795)
chr4 (47-96)||(31243550-31243600)
chr4 (110-155)||(715548-715593)
chr4 (110-155)||(752874-752919)
chr4 (87-155)||(17876214-17876282)
chr4 (60-96)||(30520438-30520474)
[»] chr2 (17 HSPs)
chr2 (110-155)||(18840956-18841001)
chr2 (48-154)||(37411188-37411295)
chr2 (34-96)||(25544475-25544538)
chr2 (47-155)||(34006933-34007043)
chr2 (109-155)||(37419824-37419870)
chr2 (110-155)||(2438662-2438707)
chr2 (60-96)||(11308006-11308042)
chr2 (92-155)||(10535688-10535751)
chr2 (108-155)||(44860400-44860447)
chr2 (109-155)||(15657945-15657991)
chr2 (110-156)||(21091794-21091840)
chr2 (109-155)||(26769592-26769638)
chr2 (109-155)||(38117102-38117148)
chr2 (47-95)||(10535762-10535811)
chr2 (105-158)||(17776664-17776717)
chr2 (110-155)||(18622673-18622718)
chr2 (47-102)||(12748691-12748747)
[»] scaffold0007 (1 HSPs)
scaffold0007 (86-155)||(225200-225269)
[»] scaffold0199 (1 HSPs)
scaffold0199 (60-155)||(1970-2065)
[»] scaffold0128 (1 HSPs)
scaffold0128 (108-155)||(32773-32820)
[»] scaffold0003 (1 HSPs)
scaffold0003 (109-155)||(241675-241721)
[»] scaffold0793 (1 HSPs)
scaffold0793 (110-155)||(4824-4869)


Alignment Details
Target: chr3 (Bit Score: 196; Significance: 1e-107; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 15 - 285
Target Start/End: Original strand, 12100245 - 12100523
Alignment:
Q  15 gacatagacaaggacaccagacaccgactcgcataataatttgacaaatgacataattcagtgtaataataggtgtcgtgtctgacactaacgtgtgtcc 114  Q
    |||||||| ||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  12100245 gacatagaaaaggacaccggacaccgaatcgcataataatttgacaaatgatataattcagtgtaataataggtgtcgtgtctgacactaacgcgtgtcc 12100344  T
Q  115 gacaccgggacacacctagtccgaggagtgcccgtgcttcacaggcgggaat---------ctaaattctattaattttaagtaatgacctaacattaac 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||           |||  |||  |||||||||||||||||||||||||||    
T  12100345 gacaccgggacacacctagtccgaggagtgcccgtgcttcacaggcgggaataagtgaaaataaaacacta-gaattttaagtaatgacctaacattaac 12100443  T
Q  206 tcaccaataaattgtattttcatcttaacataaaatctgaaaattcaaattaggacaatacctaatgcaactcatcccct 285  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  12100444 tcaccaataaattgtattttcatcttaacataaaatctgaaaattcaaattaggacaatagctaatgcaactcatcccct 12100523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 38 - 155
Target Start/End: Complemental strand, 24205102 - 24204984
Alignment:
Q  38 ccgactcgcataataatttgacaaa-tgacataattcagtgtaataataggtgtcgtgtctgacactaacgtgtgtccgacaccgggacacacctagtcc 136  Q
    ||||| || |||||||||||| ||| ||||||||| ||||||||| ||| |||||||||| |||||| ||| |||||||||||| |||||| |||| | |    
T  24205102 ccgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtcgtgtcggacactgacgcgtgtccgacaccaggacacgcctaattc 24205003  T
Q  137 gaggagtgcccgtgcttca 155  Q
    |||||||| ||||||||||    
T  24205002 gaggagtgtccgtgcttca 24204984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 47 - 155
Target Start/End: Complemental strand, 3730217 - 3730111
Alignment:
Q  47 ataataatttgaca-aatgacataattcagtgtaataataggtgtcgtgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtgc 145  Q
    |||||||||||| | ||||||||||||||||||||| |||||||||||||||||||| || |  ||||   |||||||||||||||| |||||||||||     
T  3730217 ataataatttgagataatgacataattcagtgtaatcataggtgtcgtgtctgacaccaatgcatgtc---caccgggacacacctaatccgaggagtgt 3730121  T
Q  146 ccgtgcttca 155  Q
    || |||||||    
T  3730120 ccatgcttca 3730111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 47 - 155
Target Start/End: Original strand, 25074796 - 25074911
Alignment:
Q  47 ataataatttgacaaa-tgacataattcagtgtaataatagg-----tgtcg-tgtctgacactaacgtgtgtccgacaccgggacacacctagtccgag 139  Q
    |||||||||||| ||| |||||||||| |||||||| |||||     ||||| |||||||||| |||| ||||||||||| |||||||||||| ||||||    
T  25074796 ataataatttgagaaaatgacataattgagtgtaatcataggcgttgtgtcggtgtctgacaccaacgcgtgtccgacactgggacacacctaatccgag 25074895  T
Q  140 gagtgcccgtgcttca 155  Q
    |||||  |||||||||    
T  25074896 gagtgttcgtgcttca 25074911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 47 - 141
Target Start/End: Original strand, 21149074 - 21149169
Alignment:
Q  47 ataataatttgacaaa-tgacataattcagtgtaataataggtgtcg-tgtctgacactaacgtgtgtccgacaccgggacacacctagtccgagga 141  Q
    |||||||||||| ||| ||||||||||||||||||| | || ||||| |||| ||||| |||||||||| |||||| | ||||||||| ||||||||    
T  21149074 ataataatttgagaaaatgacataattcagtgtaatcaaagatgtcgttgtcggacaccaacgtgtgtctgacacc-gaacacacctaatccgagga 21149169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 141
Target Start/End: Original strand, 25365469 - 25365564
Alignment:
Q  47 ataataatttgacaa-atgacataattcagtgtaataataggtgtcgtgtctgacactaacgtgtgtccgacaccgggacacacctagtccgagga 141  Q
    |||||||||||| || |||||||||||| ||||||| ||| |||||||||| |||||  | |||||| ||||||| |||||| |||| || |||||    
T  25365469 ataataatttgagaatatgacataattcggtgtaatcataagtgtcgtgtcggacaccgatgtgtgttcgacaccaggacacgcctaatctgagga 25365564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 155
Target Start/End: Complemental strand, 34185102 - 34185055
Alignment:
Q  108 tgtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 155  Q
    |||||||||||||||||||| |||| ||||||||||| ||||||||||    
T  34185102 tgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttca 34185055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 12704740 - 12704659
Alignment:
Q  15 gacatagacaaggacaccagacaccgactcgcataataatttgacaaa-tgacataattcagtgtaataataggtgtcgtgtc 96  Q
    |||| ||||||||||||| |||||  || || |||||||||||| ||| |||||||||||| |||||| ||||||||||||||    
T  12704740 gacacagacaaggacaccggacaca-acacggataataatttgaaaaaatgacataattcaatgtaatcataggtgtcgtgtc 12704659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 155
Target Start/End: Original strand, 15864831 - 15864948
Alignment:
Q  38 ccgactcgcataataatttgacaaa-tgacataattcagtgtaataataggtgtcgtgtctgacactaacgtgtgtccgacaccgggacacacctagtcc 136  Q
    ||||| || |||||||||||| ||| ||| |||||| |||||||| |||||||||||||| |||||  ||  ||||| |||| |||||||| |||| |||    
T  15864831 ccgacacggataataatttgaaaaaatgatataatttagtgtaatcataggtgtcgtgtcggacaccgacacgtgtctgaca-cgggacacgcctaatcc 15864929  T
Q  137 gaggagtgcccgtgcttca 155  Q
     | ||||| ||||||||||    
T  15864930 aaagagtgtccgtgcttca 15864948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 155
Target Start/End: Original strand, 52369857 - 52369903
Alignment:
Q  109 gtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 155  Q
    |||||| ||||||||||||||||| ||||||||||| ||||||||||    
T  52369857 gtgtccaacaccgggacacacctattccgaggagtgtccgtgcttca 52369903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 86 - 155
Target Start/End: Original strand, 27505299 - 27505367
Alignment:
Q  86 ggtgtcgtgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 155  Q
    ||||||||||||||||| | |  ||||||||||||||||||  |||| ||||||||||| ||||||||||    
T  27505299 ggtgtcgtgtctgacacga-cacgtgtccgacaccgggacatgcctaatccgaggagtgtccgtgcttca 27505367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 155
Target Start/End: Complemental strand, 40993373 - 40993278
Alignment:
Q  60 aaatgacataattcagtgtaataataggtgtcg-tgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 155  Q
    |||| ||||||||||||||||| ||| |||||| |||| ||||| | |   |||||||||||||||||| |||| ||||||||||| || |||||||    
T  40993373 aaatcacataattcagtgtaattatatgtgtcggtgtcggacacga-cacatgtccgacaccgggacacgcctaatccgaggagtgtccatgcttca 40993278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 112 - 155
Target Start/End: Complemental strand, 49651762 - 49651719
Alignment:
Q  112 tccgacaccgggacacacctagtccgaggagtgcccgtgcttca 155  Q
    ||||||||||||||||||||| |||||| |||| ||||||||||    
T  49651762 tccgacaccgggacacacctaatccgagaagtgtccgtgcttca 49651719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 155
Target Start/End: Complemental strand, 4987269 - 4987223
Alignment:
Q  109 gtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 155  Q
    ||||||||||||||||||| |||| ||||||||||| |||| |||||    
T  4987269 gtgtccgacaccgggacacgcctaatccgaggagtgtccgtacttca 4987223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 102
Target Start/End: Complemental strand, 35994788 - 35994734
Alignment:
Q  48 taataatttgacaaatgacataattcagtgtaataataggtgtcgtgtctgacac 102  Q
    ||||||||||| |||| ||||||||||||||||| | | |||||||||| |||||    
T  35994788 taataatttgaaaaatcacataattcagtgtaattacaagtgtcgtgtcggacac 35994734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 155
Target Start/End: Original strand, 40052382 - 40052428
Alignment:
Q  109 gtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 155  Q
    ||||||||||||||||||| |||| |||||||||||  |||||||||    
T  40052382 gtgtccgacaccgggacacgcctaatccgaggagtgttcgtgcttca 40052428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 155
Target Start/End: Original strand, 55401145 - 55401191
Alignment:
Q  109 gtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 155  Q
    ||||||||||||| ||||| |||| ||||||||||| ||||||||||    
T  55401145 gtgtccgacaccgagacacgcctaatccgaggagtgtccgtgcttca 55401191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 93
Target Start/End: Original strand, 1830364 - 1830397
Alignment:
Q  60 aaatgacataattcagtgtaataataggtgtcgt 93  Q
    |||||||||||||||||||||| |||||||||||    
T  1830364 aaatgacataattcagtgtaatcataggtgtcgt 1830397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 151
Target Start/End: Original strand, 3631755 - 3631796
Alignment:
Q  110 tgtccgacaccgggacacacctagtccgaggagtgcccgtgc 151  Q
    ||||||||||| |||||| |||||||||||||||| ||||||    
T  3631755 tgtccgacaccaggacacgcctagtccgaggagtgtccgtgc 3631796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 155
Target Start/End: Original strand, 20503536 - 20503581
Alignment:
Q  110 tgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 155  Q
    |||| ||||||||||||| |||| ||||||||||| ||||||||||    
T  20503536 tgtctgacaccgggacacgcctaatccgaggagtgtccgtgcttca 20503581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 107 - 155
Target Start/End: Complemental strand, 16789636 - 16789588
Alignment:
Q  107 gtgtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 155  Q
    |||||||||||| ||||||||||||| ||| ||||||| || |||||||    
T  16789636 gtgtgtccgacaacgggacacacctaatcctaggagtgtccatgcttca 16789588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 96
Target Start/End: Original strand, 25892481 - 25892517
Alignment:
Q  60 aaatgacataattcagtgtaataataggtgtcgtgtc 96  Q
    |||||| ||||||||||||||| ||||||||||||||    
T  25892481 aaatgatataattcagtgtaatcataggtgtcgtgtc 25892517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 5e-22; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 47 - 155
Target Start/End: Complemental strand, 22794130 - 22794021
Alignment:
Q  47 ataataatttgacaaa-tgacataattcagtgtaataataggtgtcgtgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtgc 145  Q
    |||||||||||| ||| ||||||||| ||||||||| |||||||||||||| |||||| |||  |||||||| |||||||||||||| | |||||||||     
T  22794130 ataataatttgaaaaaatgacataatacagtgtaattataggtgtcgtgtccgacactgacgcatgtccgactccgggacacacctaattcgaggagtgt 22794031  T
Q  146 ccgtgcttca 155  Q
     |||||||||    
T  22794030 acgtgcttca 22794021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 144
Target Start/End: Complemental strand, 18190159 - 18190062
Alignment:
Q  48 taataatttgacaaa-tgacataattcagtgtaataataggtgtcg-tgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtg 144  Q
    ||||||||||| ||| | ||||||||||||||||| | | |||||| |||| ||||| |||  |||||||||||||||||||||||| |||||||||||    
T  18190159 taataatttgaaaaaattacataattcagtgtaattacaagtgtcgatgtcagacac-aacacgtgtccgacaccgggacacacctaatccgaggagtg 18190062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 105 - 155
Target Start/End: Complemental strand, 42359442 - 42359392
Alignment:
Q  105 acgtgtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 155  Q
    ||||||||||||||||||||||| |||| ||||||||||| ||||||||||    
T  42359442 acgtgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttca 42359392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 60 - 150
Target Start/End: Original strand, 21145488 - 21145574
Alignment:
Q  60 aaatgacataattcagtgtaataataggtgtcgtgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtgcccgtg 150  Q
    |||||||||||||||||||||| ||||| |||||||| |    | ||||||||||||||||| ||| |||||| || |||||||| |||||    
T  21145488 aaatgacataattcagtgtaatcataggcgtcgtgtcgg----tgacgtgtgtccgacaccgagacgcacctaatctgaggagtgtccgtg 21145574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 155
Target Start/End: Complemental strand, 16297274 - 16297224
Alignment:
Q  105 acgtgtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 155  Q
    |||||||||||||||| |||||| |||| ||||||||||| ||||||||||    
T  16297274 acgtgtgtccgacaccaggacacgcctaatccgaggagtgtccgtgcttca 16297224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 91
Target Start/End: Complemental strand, 40747840 - 40747780
Alignment:
Q  32 cagacaccgactcgcataataatttgacaaa-tgacataattcagtgtaataataggtgtc 91  Q
    ||||||||||| || |||||||||||| ||| |||||||||||| |||||| |||||||||    
T  40747840 cagacaccgacacggataataatttgagaaaatgacataattcaatgtaattataggtgtc 40747780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 48 - 155
Target Start/End: Complemental strand, 1486760 - 1486647
Alignment:
Q  48 taataatttgacaaa-tgacataattcagtgtaataata------ggtgtcgtgtctgacactaacgtgtgtccgacaccgggacacacctagtccgagg 140  Q
    ||||||||||| ||| | ||||||||||||||||| |||      ||||||||||| ||||| | |  ||||||||||||||||||| |||| |||||||    
T  1486760 taataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcgtgtcggacacga-cacgtgtccgacaccgggacacgcctaatccgagg 1486662  T
Q  141 agtgcccgtgcttca 155  Q
    |||| | ||||||||    
T  1486661 agtgtctgtgcttca 1486647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 108 - 155
Target Start/End: Original strand, 10233325 - 10233372
Alignment:
Q  108 tgtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 155  Q
    ||||||||||||| ||||||||||| || |||||||| ||||||||||    
T  10233325 tgtgtccgacaccaggacacacctaatcagaggagtgtccgtgcttca 10233372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 48 - 145
Target Start/End: Original strand, 40181879 - 40181977
Alignment:
Q  48 taataatttgacaaa-tgacataattcagtgtaataataggtgtcg-tgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtgc 145  Q
    ||||||||||| ||| | ||||||||||||||||| ||| || ||| |||| ||||| |||  |||||| |||||||||||| |||| ||||||||||||    
T  40181879 taataatttgagaaaatcacataattcagtgtaattatatgtatcggtgtcggacac-aacacgtgtcctacaccgggacacgcctaatccgaggagtgc 40181977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 155
Target Start/End: Original strand, 113363 - 113409
Alignment:
Q  109 gtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 155  Q
    |||||| |||||||||||| |||| |||||||||||||| |||||||    
T  113363 gtgtccaacaccgggacacgcctaatccgaggagtgcccatgcttca 113409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 98
Target Start/End: Complemental strand, 6936438 - 6936400
Alignment:
Q  60 aaatgacataattcagtgtaataataggtgtcgtgtctg 98  Q
    ||||||||||||| |||||||| ||||||||||||||||    
T  6936438 aaatgacataattaagtgtaatcataggtgtcgtgtctg 6936400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 155
Target Start/End: Original strand, 9828125 - 9828171
Alignment:
Q  109 gtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 155  Q
    |||||||||||||||||||  ||| ||||||||||| ||||||||||    
T  9828125 gtgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttca 9828171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 155
Target Start/End: Complemental strand, 20157388 - 20157287
Alignment:
Q  60 aaatgacataattcagtgtaataata------ggtgtcgtgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtgcccgtgctt 153  Q
    |||| ||||||||||||||||| |||      ||||||||||| |||||  ||| ||||||||||||| |||||||||| |  |||||||  ||||||||    
T  20157388 aaatcacataattcagtgtaatcatatgtgtcggtgtcgtgtccgacaccgacgcgtgtccgacaccgagacacacctaatttgaggagtatccgtgctt 20157289  T
Q  154 ca 155  Q
    ||    
T  20157288 ca 20157287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 155
Target Start/End: Original strand, 40917830 - 40917876
Alignment:
Q  109 gtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 155  Q
    ||||||||||||||||||| |||| |||||||| || ||||||||||    
T  40917830 gtgtccgacaccgggacacgcctaatccgaggactgtccgtgcttca 40917876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 155
Target Start/End: Complemental strand, 7918197 - 7918157
Alignment:
Q  115 gacaccgggacacacctagtccgaggagtgcccgtgcttca 155  Q
    |||||| ||||||||||| ||||||||||| ||||||||||    
T  7918197 gacaccaggacacacctaatccgaggagtgtccgtgcttca 7918157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 155
Target Start/End: Complemental strand, 11412806 - 11412710
Alignment:
Q  60 aaatgacataattcagtgtaataataggtgtc-gtgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 155  Q
    ||||||||||||||| ||| || ||||||||| ||||  ||||| ||| ||||||||||||  |||||  |||  ||| ||||||| ||||||||||    
T  11412806 aaatgacataattcaatgtgatcataggtgtcggtgttggacaccaacatgtgtccgacactaggacatgccttatcctaggagtgtccgtgcttca 11412710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 157
Target Start/End: Complemental strand, 11634112 - 11634064
Alignment:
Q  109 gtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttcaca 157  Q
    |||||||||||| ||||||||| | ||||| ||||| ||||||||||||    
T  11634112 gtgtccgacaccaggacacaccaaatccgaagagtgtccgtgcttcaca 11634064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 155
Target Start/End: Original strand, 18337350 - 18337445
Alignment:
Q  60 aaatgacataattcagtgtaataataggtgtcg-tgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 155  Q
    |||| ||||||||||||||||| | | |||||| |||| ||||| |||  ||||||||||| ||||||  |||  ||||||||||| ||||||||||    
T  18337350 aaatcacataattcagtgtaattacaagtgtcggtgtcggacac-aacacgtgtccgacactgggacatgcctgatccgaggagtgtccgtgcttca 18337445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 107 - 155
Target Start/End: Complemental strand, 21366043 - 21365995
Alignment:
Q  107 gtgtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 155  Q
    |||| |||||||||| ||||| |||| ||||||||||| ||||||||||    
T  21366043 gtgtatccgacaccgagacacgcctaatccgaggagtgtccgtgcttca 21365995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 102
Target Start/End: Original strand, 36878469 - 36878525
Alignment:
Q  48 taataatttgacaaa-tgacataattcagtgtaataataggtgtc-gtgtctgacac 102  Q
    ||||||||||| ||| | ||||||||||||||||| ||||||||| |||||||||||    
T  36878469 taataatttgagaaaatcacataattcagtgtaattataggtgtcggtgtctgacac 36878525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 2e-21; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 60 - 144
Target Start/End: Original strand, 12278856 - 12278940
Alignment:
Q  60 aaatgacataattcagtgtaataataggtgtcgtgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtg 144  Q
    |||||||||||||||||||||| ||| |||||||||| ||||| |||| ||||| |||||||||||||||||| ||| |||||||    
T  12278856 aaatgacataattcagtgtaattatatgtgtcgtgtcggacaccaacgcgtgtctgacaccgggacacacctaatcctaggagtg 12278940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 109 - 155
Target Start/End: Complemental strand, 32287452 - 32287406
Alignment:
Q  109 gtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 155  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||    
T  32287452 gtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttca 32287406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 112 - 155
Target Start/End: Original strand, 24339726 - 24339769
Alignment:
Q  112 tccgacaccgggacacacctagtccgaggagtgcccgtgcttca 155  Q
    |||||||||||||||| |||| ||||||||||||||||||||||    
T  24339726 tccgacaccgggacacgcctaatccgaggagtgcccgtgcttca 24339769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 155
Target Start/End: Complemental strand, 5409820 - 5409774
Alignment:
Q  109 gtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 155  Q
    ||||||||||||||||||| |||| ||||||||||| ||||||||||    
T  5409820 gtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttca 5409774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 86 - 155
Target Start/End: Original strand, 9778553 - 9778621
Alignment:
Q  86 ggtgtcgtgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 155  Q
    ||||||||||| ||||| |||  ||||||||||||||||||| |||| ||| ||||||| ||||||||||    
T  9778553 ggtgtcgtgtcggacac-aacacgtgtccgacaccgggacacgcctaatccaaggagtgtccgtgcttca 9778621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 155
Target Start/End: Original strand, 23751907 - 23752015
Alignment:
Q  47 ataataatttgacaaa-tgacataattcagtgtaataataggtgtcgtgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtgc 145  Q
    |||||||||||| ||| ||| |||||| |||||||| |||||||||||||| |||||  ||| ||||| |||| |||||||| |||| |||||  ||||     
T  23751907 ataataatttgataaaatgatataatttagtgtaatcataggtgtcgtgtcggacaccgacgcgtgtcagaca-cgggacacgcctaatccgataagtgt 23752005  T
Q  146 ccgtgcttca 155  Q
    | ||||||||    
T  23752006 ctgtgcttca 23752015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 106 - 155
Target Start/End: Original strand, 35749954 - 35750003
Alignment:
Q  106 cgtgtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 155  Q
    ||||||||||| |||||||||||||||||| |||||||| | ||||||||    
T  35749954 cgtgtgtccgaaaccgggacacacctagtcggaggagtgtctgtgcttca 35750003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 29812729 - 29812666
Alignment:
Q  34 gacaccgactcgcataataatttgacaaa-tgacataattcagtgtaataataggtgtcgtgtc 96  Q
    ||||||||| || |||||||||||| ||| ||| |||||| |||||||| ||||||||||||||    
T  29812729 gacaccgacccgtataataatttgagaaaatgatataatttagtgtaatcataggtgtcgtgtc 29812666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 153
Target Start/End: Original strand, 43250051 - 43250118
Alignment:
Q  86 ggtgtcgtgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtgcccgtgctt 153  Q
    ||||||| ||| |||||| ||| |||||||||||| |||||| |||| | ||||||||| ||||||||    
T  43250051 ggtgtcgcgtcggacactgacgcgtgtccgacaccaggacacgcctaattcgaggagtgtccgtgctt 43250118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 155
Target Start/End: Original strand, 598278 - 598324
Alignment:
Q  109 gtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 155  Q
    ||||||||||||||||||| |||| |||||| |||| ||||||||||    
T  598278 gtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttca 598324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 155
Target Start/End: Original strand, 6490786 - 6490832
Alignment:
Q  109 gtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 155  Q
    ||||||||||||||||||| | || ||||||||||| ||||||||||    
T  6490786 gtgtccgacaccgggacacgcttaatccgaggagtgtccgtgcttca 6490832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 155
Target Start/End: Original strand, 17852070 - 17852116
Alignment:
Q  109 gtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 155  Q
    ||||||||||||| |||||||||| | ||||||||| ||||||||||    
T  17852070 gtgtccgacaccgagacacacctaattcgaggagtgtccgtgcttca 17852116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 155
Target Start/End: Complemental strand, 43027453 - 43027407
Alignment:
Q  109 gtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 155  Q
    ||||||||||||||||||| |||| ||||| ||||| ||||||||||    
T  43027453 gtgtccgacaccgggacacgcctaatccgatgagtgtccgtgcttca 43027407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 155
Target Start/End: Original strand, 20549799 - 20549907
Alignment:
Q  48 taataatttgacaaa-tgacataattcagtgtaataataggtgtcg-tgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtgc 145  Q
    ||||||||||| ||| | || |||||||||||||| ||| |||||| |||| ||||| |||   |||||||||  | ||||| |||| ||||||||||||    
T  20549799 taataatttgagaaaatcacgtaattcagtgtaattatatgtgtcggtgtcggacac-aacacatgtccgacaatgagacacgcctaatccgaggagtgc 20549897  T
Q  146 ccgtgcttca 155  Q
    ||||||||||    
T  20549898 ccgtgcttca 20549907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 96
Target Start/End: Complemental strand, 17780122 - 17780086
Alignment:
Q  60 aaatgacataattcagtgtaataataggtgtcgtgtc 96  Q
    ||||||||||||||  |||||||||||||||||||||    
T  17780122 aaatgacataattctatgtaataataggtgtcgtgtc 17780086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 92
Target Start/End: Complemental strand, 18233636 - 18233604
Alignment:
Q  60 aaatgacataattcagtgtaataataggtgtcg 92  Q
    |||||||||||||||||||||| ||||||||||    
T  18233636 aaatgacataattcagtgtaattataggtgtcg 18233604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 96
Target Start/End: Original strand, 23930240 - 23930276
Alignment:
Q  60 aaatgacataattcagtgtaataataggtgtcgtgtc 96  Q
    |||||||||||||||||||||| |||||||| |||||    
T  23930240 aaatgacataattcagtgtaatcataggtgttgtgtc 23930276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 40287350 - 40287306
Alignment:
Q  110 tgtccgacaccgggacacacctagtccgaggagtgcccgtgcttc 154  Q
    |||||||||||||||||  |||| ||||||||||| |||||||||    
T  40287350 tgtccgacaccgggacatgcctaatccgaggagtgtccgtgcttc 40287306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 2e-21; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 60 - 156
Target Start/End: Complemental strand, 12235557 - 12235461
Alignment:
Q  60 aaatgacataattcagtgtaataataggtgtcgtgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttcac 156  Q
    |||||||||||||||||||||| |||||||||||||| |||||  ||||||||||| ||||||||||| |||| ||| |  |||| |||||||||||    
T  12235557 aaatgacataattcagtgtaatcataggtgtcgtgtccgacaccgacgtgtgtccggcaccgggacacccctaatccaaaaagtgtccgtgcttcac 12235461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 104 - 155
Target Start/End: Complemental strand, 9107353 - 9107302
Alignment:
Q  104 aacgtgtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 155  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  9107353 aacgtgtgtccgacaccgggacacacctaatccgaggagtgcccgtgcttca 9107302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 155
Target Start/End: Original strand, 31959219 - 31959266
Alignment:
Q  108 tgtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 155  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  31959219 tgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttca 31959266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 109 - 155
Target Start/End: Complemental strand, 8389457 - 8389411
Alignment:
Q  109 gtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 155  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||    
T  8389457 gtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttca 8389411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 155
Target Start/End: Original strand, 34595142 - 34595250
Alignment:
Q  48 taataatttgacaaa-tgacataattcagtgtaataataggtgtcg-tgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtgc 145  Q
    ||||||||||| ||| | ||||||||||||||||| | | |||||| |||| ||||| | |  ||||| |||||||||||||||||| |||||||||||     
T  34595142 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacga-cacgtgtctgacaccgggacacacctaatccgaggagtgt 34595240  T
Q  146 ccgtgcttca 155  Q
    ||||||||||    
T  34595241 ccgtgcttca 34595250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 48 - 155
Target Start/End: Original strand, 28152107 - 28152214
Alignment:
Q  48 taataatttgacaaatgacataattcagtgtaataataggtgtc-gtgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtgcc 146  Q
    ||||||||||| |||| ||||||||||||||||| | | ||||| ||||| |||||  ||  ||||||||||||||||||  |||| |||||||||||      
T  28152107 taataatttgaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacac-gacacgtgtccgacaccgggacaggcctaatccgaggagtgtt 28152205  T
Q  147 cgtgcttca 155  Q
    |||||||||    
T  28152206 cgtgcttca 28152214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 47 - 155
Target Start/End: Original strand, 34446572 - 34446687
Alignment:
Q  47 ataataatttgacaaa-tgacataattcagtgtaataataggtgtcgtgtctg------acactaacgtgtgtccgacaccgggacacacctagtccgag 139  Q
    |||||||||||| ||| ||||||||||||||||||| |||||||||||||| |      ||||  ||| || || ||||| |||||||||||| ||| ||    
T  34446572 ataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtccaacaccgacgcgtatctgacactgggacacacctaatccaag 34446671  T
Q  140 gagtgcccgtgcttca 155  Q
    ||||| ||||||||||    
T  34446672 gagtgtccgtgcttca 34446687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 155
Target Start/End: Complemental strand, 8776957 - 8776911
Alignment:
Q  109 gtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 155  Q
    ||||||||||||| |||||||||| ||||||||||| ||||||||||    
T  8776957 gtgtccgacaccgagacacacctaatccgaggagtgtccgtgcttca 8776911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 130
Target Start/End: Complemental strand, 13689259 - 13689161
Alignment:
Q  33 agacaccgactcgcataataatttgacaaa-tgacataattcagtgtaataataggtgtcgtgtctgacactaacgtgtgtccgacaccgggacacacc 130  Q
    |||||||||| |  |||||||||||| ||| | ||| | |||| |||||| |||||| ||||||| |||||| |||||||||| ||| |||||||||||    
T  13689259 agacaccgacacagataataatttgagaaaataacaaatttcaatgtaatcataggtatcgtgtcggacactgacgtgtgtcccacatcgggacacacc 13689161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 155
Target Start/End: Complemental strand, 9025494 - 9025448
Alignment:
Q  109 gtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 155  Q
    ||||||||||||||||||| |||| |||||| |||| ||||||||||    
T  9025494 gtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttca 9025448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 96
Target Start/End: Complemental strand, 12086397 - 12086347
Alignment:
Q  47 ataataatttgaca-aatgacataattcagtgtaataataggtgtcgtgtc 96  Q
    |||||||||||| | |||||||||||||||| |||| ||||||||||||||    
T  12086397 ataataatttgagataatgacataattcagtttaatcataggtgtcgtgtc 12086347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 96
Target Start/End: Complemental strand, 17168515 - 17168465
Alignment:
Q  47 ataataatttgacaaa-tgacataattcagtgtaataataggtgtcgtgtc 96  Q
    |||||||||||| ||| ||| |||||| |||||||||||||||||||||||    
T  17168515 ataataatttgagaaaatgatataatttagtgtaataataggtgtcgtgtc 17168465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 127
Target Start/End: Complemental strand, 4420217 - 4420149
Alignment:
Q  60 aaatgacataattcagtgtaataataggtg-tcgtgtctgacactaacgtgtgtccgacaccgggacac 127  Q
    |||||| ||||||||||||||  ||||||| | ||||| ||||| |||||||||| |||||| ||||||    
T  4420217 aaatgatataattcagtgtaaccataggtgttggtgtcagacaccaacgtgtgtctgacaccaggacac 4420149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 2e-21; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 47 - 155
Target Start/End: Complemental strand, 18586340 - 18586232
Alignment:
Q  47 ataataatttgacaaatgacataattcagtgtaataataggtgtcgtgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtgcc 146  Q
    |||||||||||| |||||||||||| ||||||||| |||||||||||||| || ||| |||  |||||||| | || ||||||||| | ||||||||| |    
T  18586340 ataataatttgaaaaatgacataatacagtgtaattataggtgtcgtgtccgagactgacgcatgtccgactctggaacacacctaattcgaggagtgtc 18586241  T
Q  147 cgtgcttca 155  Q
    |||||||||    
T  18586240 cgtgcttca 18586232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 132
Target Start/End: Complemental strand, 7997218 - 7997132
Alignment:
Q  47 ataataatttgacaaa-tgacataattcagtgtaataataggtgtcgtgtctgacactaacgtgtgtccgacaccgggacacaccta 132  Q
    |||||||||||| ||| ||| ||||| ||||||||| ||| |||||||||| |||||| ||| |||||||||| | |||||||||||    
T  7997218 ataataatttgagaaaatgatataatacagtgtaattataagtgtcgtgtcggacactgacgcgtgtccgacatcaggacacaccta 7997132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 155
Target Start/End: Complemental strand, 21191107 - 21190999
Alignment:
Q  48 taataatttgacaaa-tgacataattcagtgtaataataggtgtcg-tgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtgc 145  Q
    ||||||||||| ||| | ||||||||||||||||| | | |||||| |||| ||||| |||  ||||||||| ||||||||| |||| |||||||||||     
T  21191107 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacac-aacacgtgtccgactccgggacacgcctaatccgaggagtgt 21191009  T
Q  146 ccgtgcttca 155  Q
    ||||||||||    
T  21191008 ccgtgcttca 21190999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 132
Target Start/End: Original strand, 21137710 - 21137786
Alignment:
Q  60 aaatgacataattcagtgtaataataggtgtcgtgtctg----acactaacgtgtgtccgacaccgggacacaccta 132  Q
    ||||||| |||||||||| ||| |||||||||||||| |    |||| |||| ||||||||||||||||||||||||    
T  21137710 aaatgacgtaattcagtgaaatcataggtgtcgtgtcggtcggacaccaacgcgtgtccgacaccgggacacaccta 21137786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 155
Target Start/End: Complemental strand, 38464361 - 38464316
Alignment:
Q  110 tgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 155  Q
    ||||||||||||||||||||||| ||||||||||| | ||||||||    
T  38464361 tgtccgacaccgggacacacctaatccgaggagtgtctgtgcttca 38464316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 129
Target Start/End: Complemental strand, 26205798 - 26205723
Alignment:
Q  60 aaatgacataattcagtgtaataataggtgtc------gtgtctgacactaacgtgtgtccgacaccgggacacac 129  Q
    |||||||||||||||||||||| |||||||||      ||||| ||||| |||| || ||||||||||||||||||    
T  26205798 aaatgacataattcagtgtaatcataggtgtcgtgttggtgtcggacaccaacgcgtatccgacaccgggacacac 26205723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 156
Target Start/End: Complemental strand, 39268588 - 39268540
Alignment:
Q  108 tgtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttcac 156  Q
    |||||||||||| ||||||| |||| ||||||||||| |||||||||||    
T  39268588 tgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttcac 39268540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 155
Target Start/End: Original strand, 2419937 - 2419983
Alignment:
Q  109 gtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 155  Q
    ||||||||| |||||||||||||| ||||| ||||| ||||||||||    
T  2419937 gtgtccgaccccgggacacacctaatccgatgagtgtccgtgcttca 2419983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 96
Target Start/End: Complemental strand, 5468030 - 5467980
Alignment:
Q  47 ataataatttgacaaa-tgacataattcagtgtaataataggtgtcgtgtc 96  Q
    |||||||||||| ||| | ||||||||||||||||| ||||||||||||||    
T  5468030 ataataatttgataaaatcacataattcagtgtaattataggtgtcgtgtc 5467980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 155
Target Start/End: Original strand, 14873592 - 14873638
Alignment:
Q  109 gtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 155  Q
    |||||| |||||||||||| |||| ||||||||||| ||||||||||    
T  14873592 gtgtccaacaccgggacacgcctaatccgaggagtgtccgtgcttca 14873638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 150
Target Start/End: Original strand, 17088361 - 17088402
Alignment:
Q  109 gtgtccgacaccgggacacacctagtccgaggagtgcccgtg 150  Q
    ||||||||||||||||||| |||| ||||||||||| |||||    
T  17088361 gtgtccgacaccgggacacgcctaatccgaggagtgtccgtg 17088402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 155
Target Start/End: Complemental strand, 19820376 - 19820331
Alignment:
Q  110 tgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 155  Q
    |||||||||||||||||| |||| || |||||||| ||||||||||    
T  19820376 tgtccgacaccgggacacgcctaatcagaggagtgtccgtgcttca 19820331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 31264446 - 31264495
Alignment:
Q  48 taataatttgacaaa-tgacataattcagtgtaataataggtgtcgtgtc 96  Q
    ||||||||||| ||| ||||||||||||||||||| ||| ||||||||||    
T  31264446 taataatttgagaaaatgacataattcagtgtaatcataagtgtcgtgtc 31264495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 98
Target Start/End: Complemental strand, 18607149 - 18607097
Alignment:
Q  47 ataataatttgacaaa-tgacataattcagtgtaataataggtgtcgtgtctg 98  Q
    |||||||||||| ||| | |||||||||| |||||| ||||||||||||||||    
T  18607149 ataataatttgagaaaataacataattcaatgtaatcataggtgtcgtgtctg 18607097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 3e-17; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 47 - 155
Target Start/End: Complemental strand, 30068080 - 30067971
Alignment:
Q  47 ataataatttgacaaa-tgacataattcagtgtaataataggtgtcgtgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtgc 145  Q
    |||||||||||| ||| |||||||||||||| ||||  |||||| || ||| || ||  ||||||||||||||| |||||||||||| ||||| |||||     
T  30068080 ataataatttgagaaaatgacataattcagtataatcgtaggtgccgagtcggataccgacgtgtgtccgacactgggacacacctaatccgatgagtgt 30067981  T
Q  146 ccgtgcttca 155  Q
    ||||||||||    
T  30067980 ccgtgcttca 30067971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 47 - 155
Target Start/End: Original strand, 39820436 - 39820544
Alignment:
Q  47 ataataatttgacaaa-tgacataattcagtgtaataataggtgtcgtgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtgc 145  Q
    |||||||||||| ||| ||| |||||| |||||||| |||||||||||||| |||||  ||| |||||||||| |||||||| |||| |||||| ||||     
T  39820436 ataataatttgagaaaatgatataatttagtgtaatcataggtgtcgtgtcggacaccgacgcgtgtccgaca-cgggacacgcctaatccgagaagtgt 39820534  T
Q  146 ccgtgcttca 155  Q
    ||||||||||    
T  39820535 ccgtgcttca 39820544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 109 - 155
Target Start/End: Complemental strand, 29510282 - 29510236
Alignment:
Q  109 gtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 155  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||    
T  29510282 gtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttca 29510236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 152
Target Start/End: Original strand, 40064028 - 40064075
Alignment:
Q  105 acgtgtgtccgacaccgggacacacctagtccgaggagtgcccgtgct 152  Q
    |||||||||||||||||||||||| ||| ||||||||||| |||||||    
T  40064028 acgtgtgtccgacaccgggacacatctaatccgaggagtgtccgtgct 40064075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 14692467 - 14692512
Alignment:
Q  47 ataataatttgacaaatgacataattcagtgtaataataggtgtcg 92  Q
    |||||||||||| |||||||||||||||||||||  ||||||||||    
T  14692467 ataataatttgagaaatgacataattcagtgtaactataggtgtcg 14692512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 86 - 155
Target Start/End: Original strand, 44067574 - 44067643
Alignment:
Q  86 ggtgtcgtgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 155  Q
    ||||||||||| |||||| | | |||||||||||| |||||| |||| | ||||||||| ||||||||||    
T  44067574 ggtgtcgtgtcggacactgatgcgtgtccgacaccaggacacgcctaattcgaggagtgtccgtgcttca 44067643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 60 - 155
Target Start/End: Original strand, 1676733 - 1676828
Alignment:
Q  60 aaatgacataattcagtgtaataataggtgtcgtgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 155  Q
    |||||||||| || |||||||| |||||||||||||| |||||  ||   |||| |||||| | ||||||||| ||||| | ||| ||||||||||    
T  1676733 aaatgacatattttagtgtaatcataggtgtcgtgtcggacaccgacacatgtctgacacctgcacacacctaatccgaagggtgtccgtgcttca 1676828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 108 - 155
Target Start/End: Original strand, 22652056 - 22652103
Alignment:
Q  108 tgtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 155  Q
    ||||||||||||||||||||  ||| ||||||||||| ||||||||||    
T  22652056 tgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttca 22652103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 155
Target Start/End: Original strand, 3025559 - 3025667
Alignment:
Q  48 taataatttgacaaa-tgacataattcagtgtaataataggtgtc-gtgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtgc 145  Q
    ||||||||||| ||| | ||||||||||||||||| ||||||||| ||||| |||||  ||  ||||| ||||| | |||||  ||| |||||||||||     
T  3025559 taataatttgagaaaatcacataattcagtgtaattataggtgtcagtgtcggacac-gacacgtgtctgacactgtgacacggctaatccgaggagtgt 3025657  T
Q  146 ccgtgcttca 155  Q
    ||||||||||    
T  3025658 ccgtgcttca 3025667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 155
Target Start/End: Complemental strand, 16641980 - 16641912
Alignment:
Q  86 ggtgtcgtgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 155  Q
    ||||||||||| ||||| | | ||||||  ||||||||||||||||| ||||||||||| | ||||||||    
T  16641980 ggtgtcgtgtcggacacga-catgtgtctaacaccgggacacacctaatccgaggagtgtctgtgcttca 16641912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 155
Target Start/End: Original strand, 16987973 - 16988029
Alignment:
Q  99 acactaacgtgtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 155  Q
    |||| ||| |||| || |||||||||||| |||| ||||||||||| ||||||||||    
T  16987973 acaccaacatgtgcccaacaccgggacacccctaatccgaggagtgtccgtgcttca 16988029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 48 - 155
Target Start/End: Complemental strand, 513 - 405
Alignment:
Q  48 taataatttgacaaa-tgacataattcagtgtaataataggtgtcg-tgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtgc 145  Q
    ||||||||||| ||| | ||| ||||||||||||| | | |||||| |||| ||||| | || |||||||||||||||||||||||| |||||||||||     
T  513 taataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcggacacga-cgcgtgtccgacaccgggacacacctaatccgaggagtgt 415  T
Q  146 ccgtgcttca 155  Q
    ||||||||||    
T  414 ccgtgcttca 405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 38 - 155
Target Start/End: Original strand, 24343505 - 24343629
Alignment:
Q  38 ccgactcgcataataatttgacaaa-tgacataattcagtgtaataataggtgtc------gtgtctgacactaacgtgtgtccgacaccgggacacacc 130  Q
    ||||| || |||||||||||| ||| | ||||||||||||||||| |||||||||      ||||| |||||  ||| ||||||||||||||||||| ||    
T  24343505 ccgacacggataataatttgagaaaattacataattcagtgtaattataggtgtcgtgtcggtgtccgacaccgacgcgtgtccgacaccgggacacgcc 24343604  T
Q  131 tagtccgaggagtgcccgtgcttca 155  Q
    || || |||||||| ||||||||||    
T  24343605 tattctgaggagtgtccgtgcttca 24343629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 155
Target Start/End: Complemental strand, 53381596 - 53381533
Alignment:
Q  92 gtgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 155  Q
    ||||| |||||| ||| || ||||||||||||||||||||| ||||||||||| ||||||||||    
T  53381596 gtgtcggacactgacgcgtatccgacaccgggacacacctaatccgaggagtgtccgtgcttca 53381533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 47 - 155
Target Start/End: Complemental strand, 18513293 - 18513178
Alignment:
Q  47 ataataatttgacaaa-tgacataattcagtgtaataataggtgtc------gtgtctgacactaacgtgtgtccgacaccgggacacacctagtccgag 139  Q
    |||||||||||| ||| |||||||||||| |||||| ||| |||||      ||||| |||||  |||||||||||||||| |||||| |||| || |||    
T  18513293 ataataatttgagaaaatgacataattcaatgtaatcatatgtgtcagtgttgtgtcggacaccgacgtgtgtccgacaccaggacacgcctaatctgag 18513194  T
Q  140 gagtgcccgtgcttca 155  Q
    ||||| ||||||||||    
T  18513193 gagtgtccgtgcttca 18513178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 60 - 144
Target Start/End: Complemental strand, 39507157 - 39507073
Alignment:
Q  60 aaatgacataattcagtgtaataataggtgtcgtgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtg 144  Q
    |||||| |||||| |||||||| ||||||||  |||| |||||| |   ||||||||||||| |||||||||| |||||||||||    
T  39507157 aaatgatataattaagtgtaatcataggtgttatgtcggacactgatacgtgtccgacaccgagacacacctattccgaggagtg 39507073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 155
Target Start/End: Complemental strand, 3947750 - 3947704
Alignment:
Q  109 gtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 155  Q
    |||||||||||| ||||||||||| ||||||||||| ||||||||||    
T  3947750 gtgtccgacaccaggacacacctaatccgaggagtgtccgtgcttca 3947704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 155
Target Start/End: Complemental strand, 23292975 - 23292929
Alignment:
Q  109 gtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 155  Q
    ||||||||||||||||||| |||| ||||||||||| ||||||||||    
T  23292975 gtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttca 23292929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 155
Target Start/End: Original strand, 40784029 - 40784069
Alignment:
Q  115 gacaccgggacacacctagtccgaggagtgcccgtgcttca 155  Q
    |||||||||||||||||| ||||||||||| ||||||||||    
T  40784029 gacaccgggacacacctaatccgaggagtgtccgtgcttca 40784069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 38 - 96
Target Start/End: Complemental strand, 20743339 - 20743280
Alignment:
Q  38 ccgactcgcataataatttgacaaa-tgacataattcagtgtaataataggtgtcgtgtc 96  Q
    ||||| || |||||||||||| ||| ||||||||||||||||||| |||||||| |||||    
T  20743339 ccgacacggataataatttgagaaaatgacataattcagtgtaatcataggtgttgtgtc 20743280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 109 - 156
Target Start/End: Original strand, 28084594 - 28084641
Alignment:
Q  109 gtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttcac 156  Q
    ||||||||||| ||||||| |||| ||||||||||| |||||||||||    
T  28084594 gtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttcac 28084641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 155
Target Start/End: Original strand, 19482749 - 19482795
Alignment:
Q  109 gtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 155  Q
    ||||||||||| |||||||||||| |||||||||||  |||||||||    
T  19482749 gtgtccgacactgggacacacctaatccgaggagtgttcgtgcttca 19482795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 96
Target Start/End: Complemental strand, 31243600 - 31243550
Alignment:
Q  47 ataataatttgacaaa-tgacataattcagtgtaataataggtgtcgtgtc 96  Q
    |||||||||||| ||| ||||||||||||||||||| ||||||||| ||||    
T  31243600 ataataatttgagaaaatgacataattcagtgtaatcataggtgtcatgtc 31243550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 155
Target Start/End: Complemental strand, 715593 - 715548
Alignment:
Q  110 tgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 155  Q
    |||||||||| ||||||| |||| ||||||||||| ||||||||||    
T  715593 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttca 715548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 155
Target Start/End: Complemental strand, 752919 - 752874
Alignment:
Q  110 tgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 155  Q
    |||||||||| ||||||| |||| ||||||||||| ||||||||||    
T  752919 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttca 752874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 155
Target Start/End: Original strand, 17876214 - 17876282
Alignment:
Q  87 gtgtcgtgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 155  Q
    |||||||||| |||||  |||  ||||||||||| ||||||||||| ||| ||||||| | ||||||||    
T  17876214 gtgtcgtgtcagacaccgacgcttgtccgacaccaggacacacctaatccaaggagtgtctgtgcttca 17876282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 96
Target Start/End: Complemental strand, 30520474 - 30520438
Alignment:
Q  60 aaatgacataattcagtgtaataataggtgtcgtgtc 96  Q
    |||||||||||||||||||||| |||||||| |||||    
T  30520474 aaatgacataattcagtgtaatcataggtgtagtgtc 30520438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 110 - 155
Target Start/End: Complemental strand, 18841001 - 18840956
Alignment:
Q  110 tgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 155  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||    
T  18841001 tgtccgacaccgggacacacctaatccgaggagtgtccgtgcttca 18840956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 48 - 154
Target Start/End: Complemental strand, 37411295 - 37411188
Alignment:
Q  48 taataatttgacaaa-tgacataattcagtgtaataataggtgtcg-tgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtgc 145  Q
    ||||||||||| ||| | |||||||||||||| || ||| |||||| ||||  |||| | || ||||||||||| ||||||| |||||||||||||||||    
T  37411295 taataatttgagaaaatcacataattcagtgtgattatatgtgtcgatgtcgaacacga-cgcgtgtccgacactgggacacgcctagtccgaggagtgc 37411197  T
Q  146 ccgtgcttc 154  Q
    | |||||||    
T  37411196 ctgtgcttc 37411188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 25544475 - 25544538
Alignment:
Q  34 gacaccgactcgcataataatttgacaaa-tgacataattcagtgtaataataggtgtcgtgtc 96  Q
    ||||||||| || |||||||||||| ||| ||| ||||||||||||||| ||||||||||||||    
T  25544475 gacaccgacacgtataataatttgagaaaatgatataattcagtgtaatcataggtgtcgtgtc 25544538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 155
Target Start/End: Complemental strand, 34007043 - 34006933
Alignment:
Q  47 ataataatttgacaaat-gacataattcagtgtaataataggtgtc-gtgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtg 144  Q
    |||||||||||| |||| |||||||||||||||||| ||||||||| ||||  |||||  |   ||||| |||||||| ||||||||| | | |||||||    
T  34007043 ataataatttgagaaattgacataattcagtgtaatcataggtgtcggtgtgggacacctattcgtgtctgacaccggaacacacctaattcaaggagtg 34006944  T
Q  145 cccgtgcttca 155  Q
     ||||||||||    
T  34006943 tccgtgcttca 34006933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 155
Target Start/End: Original strand, 37419824 - 37419870
Alignment:
Q  109 gtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 155  Q
    ||||||||||||||||||| |||| ||||||||||| ||||||||||    
T  37419824 gtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttca 37419870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 155
Target Start/End: Complemental strand, 2438707 - 2438662
Alignment:
Q  110 tgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 155  Q
    |||||||||||||||||| |||| ||||||||||| ||||||||||    
T  2438707 tgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttca 2438662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 96
Target Start/End: Complemental strand, 11308042 - 11308006
Alignment:
Q  60 aaatgacataattcagtgtaataataggtgtcgtgtc 96  Q
    |||||||||||||||||||||| ||||||||||||||    
T  11308042 aaatgacataattcagtgtaatcataggtgtcgtgtc 11308006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 92 - 155
Target Start/End: Complemental strand, 10535751 - 10535688
Alignment:
Q  92 gtgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 155  Q
    ||||| |||||||| ||||||| |||||| |||||| |||| |||||||||||  |||||||||    
T  10535751 gtgtccgacactaatgtgtgtctgacaccaggacacgcctaatccgaggagtgttcgtgcttca 10535688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 108 - 155
Target Start/End: Original strand, 44860400 - 44860447
Alignment:
Q  108 tgtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 155  Q
    ||||||||||| ||||||||||||| | ||||||||| ||||||||||    
T  44860400 tgtgtccgacatcgggacacacctaattcgaggagtgtccgtgcttca 44860447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 155
Target Start/End: Original strand, 15657945 - 15657991
Alignment:
Q  109 gtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 155  Q
    ||||||||| ||||||||| |||||||||||||||| || |||||||    
T  15657945 gtgtccgacgccgggacacgcctagtccgaggagtgtccatgcttca 15657991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 156
Target Start/End: Original strand, 21091794 - 21091840
Alignment:
Q  110 tgtccgacaccgggacacacctagtccgaggagtgcccgtgcttcac 156  Q
    |||| |||||||||||||||||| ||||| ||||| |||||||||||    
T  21091794 tgtcggacaccgggacacacctattccgaagagtgtccgtgcttcac 21091840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 155
Target Start/End: Original strand, 26769592 - 26769638
Alignment:
Q  109 gtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 155  Q
    ||||||||||| ||||||| |||| ||||||||||| ||||||||||    
T  26769592 gtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttca 26769638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 155
Target Start/End: Complemental strand, 38117148 - 38117102
Alignment:
Q  109 gtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 155  Q
    ||||||||||||||||||| |||| ||||||| ||| ||||||||||    
T  38117148 gtgtccgacaccgggacacgcctaatccgaggggtgtccgtgcttca 38117102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 10535811 - 10535762
Alignment:
Q  47 ataataatttgacaaa-tgacataattcagtgtaataataggtgtcgtgt 95  Q
    |||||||||||| ||| ||||||||||||||||||| ||| |||||||||    
T  10535811 ataataatttgagaaaatgacataattcagtgtaatcataagtgtcgtgt 10535762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 158
Target Start/End: Original strand, 17776664 - 17776717
Alignment:
Q  105 acgtgtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttcacag 158  Q
    |||||||||||||  |||||||  |||| ||||||||||| |||||||||||||    
T  17776664 acgtgtgtccgacctcgggacaggcctaatccgaggagtgtccgtgcttcacag 17776717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 155
Target Start/End: Original strand, 18622673 - 18622718
Alignment:
Q  110 tgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 155  Q
    ||||| |||||||||||||| || ||||||||||| ||||||||||    
T  18622673 tgtcctacaccgggacacacttaatccgaggagtgtccgtgcttca 18622718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 102
Target Start/End: Original strand, 12748691 - 12748747
Alignment:
Q  47 ataataatttgacaaa-tgacataattcagtgtaataataggtgtcgtgtctgacac 102  Q
    |||||||||||| ||| ||||||| ||||||||||| |||||||| ||||| |||||    
T  12748691 ataataatttgagaaaatgacatagttcagtgtaatcataggtgttgtgtcggacac 12748747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 86 - 155
Target Start/End: Complemental strand, 225269 - 225200
Alignment:
Q  86 ggtgtcgtgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 155  Q
    ||||||||||| |||||| ||| |||| ||||||| |||||| |||| | ||||||||| ||||||||||    
T  225269 ggtgtcgtgtcggacactgacgcgtgttcgacaccaggacacgcctaattcgaggagtgtccgtgcttca 225200  T

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Target: scaffold0199 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 60 - 155
Target Start/End: Original strand, 1970 - 2065
Alignment:
Q  60 aaatgacataattcagtgtaataataggtgtcgtgtctgacactaacgtgtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 155  Q
    |||||||||| || |||||||| |||||||||||||| |||||  ||   |||| |||||| | ||||||||| ||||| | ||| ||||||||||    
T  1970 aaatgacatattttagtgtaatcataggtgtcgtgtcggacaccgacacatgtctgacacctgcacacacctaatccgaagggtgtccgtgcttca 2065  T

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Target: scaffold0128 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 108 - 155
Target Start/End: Original strand, 32773 - 32820
Alignment:
Q  108 tgtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 155  Q
    |||||||||||||||||||||| || ||||||||||| | ||||||||    
T  32773 tgtgtccgacaccgggacacacataatccgaggagtgtcggtgcttca 32820  T

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Target: scaffold0003 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 155
Target Start/End: Original strand, 241675 - 241721
Alignment:
Q  109 gtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 155  Q
    ||||||||||||||||||| |||| |||||| |||| ||||||||||    
T  241675 gtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttca 241721  T

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Target: scaffold0793 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 155
Target Start/End: Complemental strand, 4869 - 4824
Alignment:
Q  110 tgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 155  Q
    |||||||||| ||||||| |||| ||||||||||| ||||||||||    
T  4869 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttca 4824  T

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