View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10140A_low_189 (Length: 277)

Name: NF10140A_low_189
Description: NF10140A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10140A_low_189
NF10140A_low_189
[»] chr1 (82 HSPs)
chr1 (14-172)||(39789654-39789814)
chr1 (177-275)||(13566832-13566930)
chr1 (177-275)||(35531281-35531379)
chr1 (177-275)||(43500659-43500757)
chr1 (177-275)||(1024709-1024807)
chr1 (177-275)||(30686564-30686662)
chr1 (178-275)||(8464244-8464341)
chr1 (177-275)||(12231057-12231155)
chr1 (181-275)||(19349369-19349463)
chr1 (177-275)||(29830906-29831004)
chr1 (180-275)||(1429437-1429532)
chr1 (177-275)||(38648610-38648708)
chr1 (166-275)||(45368241-45368350)
chr1 (177-275)||(1677351-1677449)
chr1 (177-271)||(20605610-20605704)
chr1 (178-275)||(21927685-21927780)
chr1 (181-275)||(37437043-37437137)
chr1 (167-275)||(40926729-40926837)
chr1 (181-275)||(7783103-7783197)
chr1 (177-275)||(13507923-13508021)
chr1 (177-275)||(13515111-13515209)
chr1 (177-275)||(35483767-35483865)
chr1 (180-277)||(31588729-31588826)
chr1 (171-275)||(31487759-31487863)
chr1 (177-257)||(32168298-32168378)
chr1 (177-275)||(37609290-37609385)
chr1 (177-257)||(51613582-51613662)
chr1 (180-275)||(12124797-12124892)
chr1 (168-270)||(18033803-18033904)
chr1 (178-275)||(49497305-49497402)
chr1 (171-275)||(19929446-19929550)
chr1 (176-275)||(44182912-44183010)
chr1 (181-275)||(9127822-9127916)
chr1 (185-271)||(45226571-45226657)
chr1 (178-257)||(5598216-5598295)
chr1 (180-275)||(39412500-39412595)
chr1 (177-275)||(2059798-2059896)
chr1 (178-264)||(49908166-49908252)
chr1 (177-275)||(50825559-50825656)
chr1 (178-275)||(52749168-52749265)
chr1 (177-257)||(37735125-37735205)
chr1 (177-257)||(48174659-48174738)
chr1 (171-275)||(51974151-51974255)
chr1 (178-257)||(33720688-33720767)
chr1 (177-275)||(13699327-13699425)
chr1 (177-259)||(35700361-35700443)
chr1 (177-259)||(52649715-52649797)
chr1 (182-275)||(30702281-30702374)
chr1 (177-258)||(32348148-32348228)
chr1 (177-257)||(4100895-4100975)
chr1 (180-259)||(36850806-36850885)
chr1 (182-257)||(42800277-42800352)
chr1 (185-275)||(32994463-32994553)
chr1 (185-275)||(35255639-35255729)
chr1 (177-259)||(36318521-36318603)
chr1 (174-259)||(10506980-10507065)
chr1 (186-275)||(51972276-51972365)
chr1 (179-275)||(48508286-48508382)
chr1 (185-275)||(28679174-28679264)
chr1 (181-257)||(12721611-12721687)
chr1 (177-257)||(43809075-43809155)
chr1 (201-259)||(19455410-19455467)
chr1 (189-231)||(43952975-43953017)
chr1 (181-258)||(46096716-46096793)
chr1 (180-232)||(35605794-35605846)
chr1 (168-275)||(10676055-10676162)
chr1 (170-232)||(9362169-9362231)
chr1 (181-275)||(38597744-38597838)
chr1 (177-227)||(52759229-52759279)
chr1 (171-232)||(42787133-42787194)
chr1 (180-232)||(1039061-1039113)
chr1 (180-232)||(1045967-1046019)
chr1 (184-232)||(15660783-15660831)
chr1 (180-227)||(22154626-22154674)
chr1 (176-228)||(45230717-45230769)
chr1 (177-225)||(48264762-48264810)
chr1 (178-253)||(31570624-31570699)
chr1 (177-275)||(18344479-18344577)
chr1 (168-253)||(17013601-17013686)
chr1 (171-223)||(15675317-15675369)
chr1 (181-225)||(41155477-41155521)
chr1 (237-273)||(44818609-44818645)
[»] chr8 (82 HSPs)
chr8 (168-275)||(38482772-38482879)
chr8 (177-275)||(34981982-34982080)
chr8 (177-275)||(35052206-35052304)
chr8 (180-275)||(33935052-33935147)
chr8 (177-275)||(26062860-26062958)
chr8 (177-275)||(38128536-38128634)
chr8 (178-275)||(11994034-11994131)
chr8 (174-275)||(14263697-14263798)
chr8 (177-275)||(39303504-39303603)
chr8 (177-275)||(13328123-13328221)
chr8 (177-275)||(14228311-14228409)
chr8 (168-275)||(45281358-45281465)
chr8 (181-275)||(4057441-4057535)
chr8 (177-275)||(23430062-23430160)
chr8 (181-271)||(23848549-23848639)
chr8 (178-275)||(16656853-16656950)
chr8 (182-275)||(40228448-40228541)
chr8 (177-275)||(25703567-25703665)
chr8 (177-275)||(25812738-25812836)
chr8 (179-275)||(34047004-34047100)
chr8 (185-275)||(1202441-1202531)
chr8 (177-275)||(15596497-15596595)
chr8 (177-275)||(18842682-18842780)
chr8 (178-275)||(1245465-1245562)
chr8 (177-273)||(2888457-2888553)
chr8 (177-259)||(8453225-8453307)
chr8 (182-272)||(9954805-9954895)
chr8 (177-275)||(14061138-14061236)
chr8 (181-275)||(43641982-43642076)
chr8 (180-257)||(26740129-26740206)
chr8 (180-275)||(8554008-8554103)
chr8 (177-275)||(17074571-17074669)
chr8 (177-275)||(17573601-17573699)
chr8 (177-275)||(18291616-18291714)
chr8 (178-275)||(32010074-32010171)
chr8 (177-275)||(41308048-41308147)
chr8 (177-275)||(12248759-12248857)
chr8 (181-275)||(12342607-12342701)
chr8 (177-259)||(31964738-31964820)
chr8 (185-275)||(39615450-39615539)
chr8 (177-259)||(43553208-43553290)
chr8 (177-257)||(14511418-14511499)
chr8 (178-257)||(8672665-8672744)
chr8 (177-232)||(35296240-35296295)
chr8 (177-275)||(23855710-23855808)
chr8 (178-275)||(10180523-10180620)
chr8 (174-259)||(21651732-21651817)
chr8 (178-251)||(29091075-29091148)
chr8 (177-257)||(27911661-27911741)
chr8 (177-257)||(27958080-27958160)
chr8 (179-227)||(45317853-45317901)
chr8 (177-232)||(13174125-13174180)
chr8 (177-275)||(36111932-36112028)
chr8 (177-227)||(7483943-7483993)
chr8 (177-227)||(30205657-30205706)
chr8 (177-275)||(36058385-36058483)
chr8 (168-257)||(3720851-3720940)
chr8 (208-277)||(40603871-40603940)
chr8 (177-273)||(11707443-11707539)
chr8 (210-257)||(17718674-17718721)
chr8 (177-232)||(19972475-19972530)
chr8 (177-232)||(21020303-21020358)
chr8 (177-232)||(41701471-41701526)
chr8 (185-275)||(2456112-2456202)
chr8 (174-232)||(38222008-38222066)
chr8 (177-259)||(41643479-41643561)
chr8 (182-223)||(6661158-6661199)
chr8 (182-223)||(6741560-6741601)
chr8 (227-275)||(3513510-3513558)
chr8 (177-228)||(11163466-11163517)
chr8 (181-229)||(23793264-23793312)
chr8 (181-232)||(1739889-1739940)
chr8 (177-232)||(6757602-6757657)
chr8 (181-228)||(11727782-11727829)
chr8 (208-275)||(35498090-35498157)
chr8 (181-258)||(167470-167548)
chr8 (177-275)||(8730818-8730916)
chr8 (182-260)||(33314712-33314790)
chr8 (182-275)||(7605894-7605986)
chr8 (170-215)||(17718909-17718954)
chr8 (178-225)||(9301533-9301580)
chr8 (179-223)||(40608243-40608287)
[»] chr5 (93 HSPs)
chr5 (168-275)||(39073179-39073286)
chr5 (166-275)||(34261447-34261556)
chr5 (177-275)||(2673964-2674062)
chr5 (177-275)||(4175466-4175564)
chr5 (177-275)||(38910408-38910506)
chr5 (178-277)||(10359222-10359321)
chr5 (177-275)||(1087919-1088017)
chr5 (177-275)||(25344095-25344193)
chr5 (178-275)||(18020755-18020852)
chr5 (180-275)||(26854084-26854179)
chr5 (180-275)||(38702276-38702371)
chr5 (180-275)||(42911685-42911780)
chr5 (177-275)||(8825192-8825290)
chr5 (177-275)||(12869885-12869983)
chr5 (178-275)||(6754166-6754263)
chr5 (177-275)||(7579653-7579752)
chr5 (180-275)||(38363324-38363419)
chr5 (177-275)||(4098466-4098564)
chr5 (177-275)||(4985161-4985259)
chr5 (178-275)||(7403987-7404084)
chr5 (180-275)||(9076206-9076301)
chr5 (180-275)||(38017266-38017361)
chr5 (177-275)||(12664993-12665091)
chr5 (177-275)||(6072587-6072685)
chr5 (177-275)||(18794918-18795016)
chr5 (177-275)||(28024245-28024343)
chr5 (177-275)||(28446971-28447069)
chr5 (177-275)||(36239593-36239691)
chr5 (177-275)||(40198923-40199021)
chr5 (166-275)||(18465832-18465941)
chr5 (186-275)||(24074833-24074922)
chr5 (177-271)||(6008023-6008118)
chr5 (177-275)||(4427391-4427490)
chr5 (178-257)||(37633829-37633908)
chr5 (177-275)||(14793776-14793874)
chr5 (177-275)||(16124246-16124344)
chr5 (177-275)||(18437309-18437407)
chr5 (177-275)||(22582607-22582704)
chr5 (192-274)||(31546000-31546082)
chr5 (181-257)||(12784433-12784509)
chr5 (177-257)||(13703250-13703330)
chr5 (177-257)||(37809912-37809992)
chr5 (177-275)||(1297723-1297822)
chr5 (178-257)||(5842980-5843059)
chr5 (177-260)||(38297511-38297594)
chr5 (181-259)||(26906641-26906719)
chr5 (178-275)||(6689734-6689831)
chr5 (177-245)||(10889174-10889242)
chr5 (181-257)||(12722949-12723025)
chr5 (177-257)||(31803477-31803557)
chr5 (176-275)||(5119313-5119412)
chr5 (180-275)||(8229793-8229887)
chr5 (178-257)||(39893796-39893875)
chr5 (182-275)||(4017549-4017642)
chr5 (178-259)||(25027562-25027643)
chr5 (171-275)||(7408466-7408570)
chr5 (177-229)||(31803118-31803170)
chr5 (185-257)||(37306693-37306765)
chr5 (168-275)||(9127328-9127435)
chr5 (177-275)||(2133894-2133990)
chr5 (178-256)||(24229102-24229180)
chr5 (186-275)||(30368130-30368219)
chr5 (188-257)||(32389139-32389208)
chr5 (177-253)||(18000490-18000565)
chr5 (180-271)||(13461149-13461240)
chr5 (177-259)||(38308112-38308194)
chr5 (186-275)||(3686825-3686914)
chr5 (182-275)||(6330956-6331049)
chr5 (184-257)||(12637940-12638013)
chr5 (178-245)||(7734771-7734838)
chr5 (185-260)||(7834059-7834134)
chr5 (209-275)||(19831560-19831626)
chr5 (177-275)||(28463371-28463469)
chr5 (185-275)||(38502798-38502888)
chr5 (166-259)||(9958858-9958951)
chr5 (180-232)||(4688810-4688862)
chr5 (177-228)||(21157815-21157866)
chr5 (180-259)||(3243947-3244026)
chr5 (208-275)||(4694899-4694966)
chr5 (181-228)||(40927334-40927381)
chr5 (177-275)||(1795103-1795201)
chr5 (181-227)||(4440272-4440318)
chr5 (177-228)||(4609206-4609258)
chr5 (183-257)||(7466335-7466409)
chr5 (181-227)||(13957150-13957196)
chr5 (177-256)||(18676400-18676480)
chr5 (177-223)||(36481262-36481308)
chr5 (181-275)||(38297606-38297700)
chr5 (178-227)||(25786090-25786139)
chr5 (185-274)||(31985044-31985133)
chr5 (177-256)||(11413516-11413595)
chr5 (177-228)||(18392957-18393008)
chr5 (177-228)||(21150674-21150725)
[»] chr4 (108 HSPs)
chr4 (177-275)||(8735545-8735643)
chr4 (177-275)||(38617299-38617395)
chr4 (177-275)||(44069187-44069285)
chr4 (177-275)||(44217862-44217960)
chr4 (177-275)||(19527210-19527308)
chr4 (177-271)||(39683704-39683798)
chr4 (177-275)||(44013903-44014001)
chr4 (172-275)||(35231846-35231949)
chr4 (177-275)||(5374340-5374438)
chr4 (181-275)||(13629187-13629281)
chr4 (177-275)||(16464772-16464870)
chr4 (177-275)||(39671481-39671579)
chr4 (177-275)||(53599776-53599874)
chr4 (177-275)||(56576094-56576192)
chr4 (174-271)||(26620338-26620435)
chr4 (178-275)||(35232289-35232386)
chr4 (178-275)||(48782355-48782452)
chr4 (186-275)||(50623569-50623658)
chr4 (180-275)||(46872077-46872172)
chr4 (177-275)||(21044738-21044835)
chr4 (177-275)||(22828391-22828489)
chr4 (185-275)||(36408879-36408969)
chr4 (185-275)||(36423045-36423135)
chr4 (191-275)||(16664397-16664481)
chr4 (177-248)||(9834463-9834534)
chr4 (177-275)||(42513015-42513114)
chr4 (177-275)||(22678299-22678397)
chr4 (177-275)||(33755021-33755119)
chr4 (186-275)||(3436066-3436155)
chr4 (177-275)||(12252248-12252346)
chr4 (177-275)||(52061714-52061812)
chr4 (177-275)||(54231695-54231793)
chr4 (177-275)||(55703076-55703174)
chr4 (178-275)||(23237786-23237883)
chr4 (186-271)||(29295514-29295599)
chr4 (181-277)||(6195178-6195274)
chr4 (178-273)||(26906380-26906475)
chr4 (176-271)||(34464437-34464532)
chr4 (177-275)||(19093143-19093241)
chr4 (185-273)||(31984150-31984238)
chr4 (186-273)||(42099866-42099953)
chr4 (177-249)||(52677156-52677228)
chr4 (177-275)||(354122-354220)
chr4 (181-275)||(38542270-38542364)
chr4 (178-255)||(42629493-42629570)
chr4 (177-257)||(30939329-30939409)
chr4 (187-275)||(37502178-37502266)
chr4 (177-257)||(49089080-49089160)
chr4 (181-277)||(32239550-32239650)
chr4 (177-275)||(31861976-31862074)
chr4 (189-275)||(53125240-53125326)
chr4 (178-275)||(33084634-33084726)
chr4 (180-257)||(43888156-43888232)
chr4 (178-259)||(47596604-47596685)
chr4 (177-257)||(9220031-9220111)
chr4 (177-232)||(33751333-33751388)
chr4 (177-260)||(47884977-47885060)
chr4 (177-275)||(23719774-23719872)
chr4 (171-257)||(33809261-33809347)
chr4 (177-227)||(38009756-38009806)
chr4 (177-259)||(45725708-45725790)
chr4 (181-227)||(48087902-48087948)
chr4 (180-257)||(42133211-42133288)
chr4 (178-231)||(47428719-47428772)
chr4 (177-273)||(55147050-55147147)
chr4 (180-256)||(30151847-30151923)
chr4 (163-271)||(44549803-44549910)
chr4 (168-260)||(47251584-47251676)
chr4 (170-257)||(3036557-3036644)
chr4 (185-271)||(8741617-8741708)
chr4 (185-275)||(18135048-18135139)
chr4 (181-260)||(29832354-29832433)
chr4 (177-232)||(38027565-38027620)
chr4 (185-272)||(42645420-42645507)
chr4 (185-275)||(49122258-49122349)
chr4 (177-232)||(55935306-55935361)
chr4 (177-227)||(8456901-8456951)
chr4 (180-250)||(17698643-17698713)
chr4 (177-275)||(29511199-29511297)
chr4 (181-227)||(34603828-34603874)
chr4 (177-275)||(36659417-36659515)
chr4 (211-257)||(53691678-53691724)
chr4 (171-259)||(44176573-44176661)
chr4 (177-228)||(1180891-1180942)
chr4 (184-259)||(26933769-26933844)
chr4 (181-227)||(14090444-14090490)
chr4 (177-227)||(18091446-18091496)
chr4 (181-275)||(40412099-40412193)
chr4 (181-259)||(47751702-47751780)
chr4 (182-256)||(48509865-48509938)
chr4 (177-243)||(23621583-23621641)
chr4 (177-225)||(1391161-1391209)
chr4 (180-228)||(9746431-9746479)
chr4 (178-252)||(1146037-1146111)
chr4 (180-223)||(14949077-14949120)
chr4 (210-257)||(34361229-34361276)
chr4 (181-232)||(52977923-52977974)
chr4 (182-225)||(55430302-55430345)
chr4 (185-228)||(56499610-56499653)
chr4 (181-223)||(51654867-51654909)
chr4 (178-223)||(4201321-4201366)
chr4 (180-232)||(7243005-7243058)
chr4 (177-218)||(34361703-34361744)
chr4 (177-214)||(36408969-36409006)
chr4 (177-214)||(36423135-36423172)
chr4 (177-258)||(52057442-52057522)
chr4 (177-253)||(31369979-31370055)
chr4 (181-228)||(37551660-37551707)
[»] chr2 (57 HSPs)
chr2 (177-275)||(15893572-15893670)
chr2 (177-275)||(15182993-15183091)
chr2 (177-275)||(10812352-10812450)
chr2 (177-275)||(26342733-26342831)
chr2 (177-275)||(36375726-36375824)
chr2 (178-275)||(14308546-14308643)
chr2 (177-275)||(3363737-3363835)
chr2 (169-271)||(3376261-3376363)
chr2 (177-275)||(30264594-30264692)
chr2 (182-275)||(14295754-14295847)
chr2 (177-273)||(41885780-41885876)
chr2 (168-275)||(19594503-19594610)
chr2 (177-275)||(34399355-34399453)
chr2 (177-275)||(37093602-37093700)
chr2 (177-275)||(34357331-34357429)
chr2 (177-271)||(44360590-44360684)
chr2 (166-275)||(10263910-10264018)
chr2 (177-272)||(1259621-1259716)
chr2 (181-275)||(478969-479063)
chr2 (178-275)||(14288584-14288679)
chr2 (177-275)||(25558178-25558276)
chr2 (177-267)||(38072224-38072314)
chr2 (177-275)||(34262814-34262912)
chr2 (181-265)||(14284247-14284330)
chr2 (180-265)||(28145566-28145653)
chr2 (187-275)||(38186054-38186142)
chr2 (185-275)||(11560047-11560137)
chr2 (171-275)||(36404827-36404931)
chr2 (177-275)||(13965760-13965858)
chr2 (177-259)||(31011710-31011792)
chr2 (167-260)||(11222298-11222391)
chr2 (178-259)||(13754125-13754205)
chr2 (179-258)||(9706957-9707036)
chr2 (177-275)||(13215546-13215644)
chr2 (171-257)||(43077463-43077549)
chr2 (166-273)||(35158332-35158439)
chr2 (177-275)||(4654872-4654970)
chr2 (181-232)||(8443874-8443925)
chr2 (187-271)||(15677298-15677377)
chr2 (178-257)||(25186823-25186902)
chr2 (180-254)||(14541505-14541579)
chr2 (185-257)||(9370145-9370217)
chr2 (177-257)||(37116595-37116675)
chr2 (181-228)||(25787527-25787574)
chr2 (181-259)||(13000907-13000985)
chr2 (178-232)||(31024933-31024987)
chr2 (180-257)||(34884533-34884610)
chr2 (183-227)||(838068-838112)
chr2 (177-257)||(13849707-13849787)
chr2 (179-254)||(4952690-4952765)
chr2 (177-232)||(32674647-32674702)
chr2 (177-227)||(37354190-37354240)
chr2 (182-275)||(4883756-4883849)
chr2 (178-223)||(36173264-36173309)
chr2 (177-275)||(1395717-1395814)
chr2 (185-223)||(33947429-33947467)
chr2 (177-257)||(32854774-32854852)
[»] scaffold0280 (1 HSPs)
scaffold0280 (177-275)||(8307-8405)
[»] chr7 (64 HSPs)
chr7 (177-275)||(33099827-33099925)
chr7 (177-275)||(8265102-8265200)
chr7 (177-275)||(12838070-12838168)
chr7 (180-275)||(7312770-7312865)
chr7 (177-275)||(8381979-8382077)
chr7 (181-275)||(31430712-31430806)
chr7 (170-275)||(32966034-32966139)
chr7 (184-275)||(41891423-41891514)
chr7 (181-275)||(18470460-18470554)
chr7 (170-271)||(22950803-22950904)
chr7 (177-275)||(29497526-29497624)
chr7 (177-275)||(32528320-32528418)
chr7 (168-249)||(17896474-17896555)
chr7 (176-275)||(44480132-44480232)
chr7 (177-275)||(36922392-36922491)
chr7 (178-257)||(42841859-42841938)
chr7 (181-275)||(29722301-29722395)
chr7 (181-275)||(41675183-41675276)
chr7 (177-275)||(47408266-47408364)
chr7 (186-275)||(36298175-36298264)
chr7 (177-275)||(26724077-26724176)
chr7 (181-275)||(28608747-28608841)
chr7 (178-275)||(31398925-31399022)
chr7 (167-275)||(5732055-5732163)
chr7 (168-275)||(10227409-10227516)
chr7 (178-257)||(18194207-18194286)
chr7 (177-260)||(33173975-33174058)
chr7 (177-275)||(3838015-3838113)
chr7 (177-275)||(33921766-33921864)
chr7 (177-271)||(38168780-38168875)
chr7 (181-259)||(19327787-19327865)
chr7 (170-252)||(44820592-44820674)
chr7 (178-275)||(7477191-7477288)
chr7 (177-258)||(33258051-33258132)
chr7 (171-257)||(31815055-31815140)
chr7 (178-227)||(9601886-9601935)
chr7 (178-227)||(9829457-9829506)
chr7 (186-275)||(35112582-35112671)
chr7 (177-232)||(3310401-3310456)
chr7 (177-252)||(6799595-6799670)
chr7 (168-227)||(35860166-35860225)
chr7 (177-232)||(41888986-41889041)
chr7 (176-259)||(42881118-42881200)
chr7 (177-275)||(30866728-30866826)
chr7 (231-275)||(17896569-17896613)
chr7 (177-253)||(24283754-24283830)
chr7 (181-257)||(35746641-35746717)
chr7 (177-232)||(8380584-8380639)
chr7 (181-228)||(46715308-46715355)
chr7 (177-232)||(47459834-47459889)
chr7 (221-275)||(20035201-20035255)
chr7 (221-275)||(20045612-20045666)
chr7 (181-219)||(34368656-34368694)
chr7 (190-275)||(36648011-36648095)
chr7 (177-256)||(8965892-8965971)
chr7 (177-225)||(36406957-36407005)
chr7 (181-228)||(3178130-3178177)
chr7 (181-228)||(22786079-22786126)
chr7 (220-275)||(26632215-26632270)
chr7 (181-256)||(43874079-43874154)
chr7 (179-228)||(35684346-35684395)
chr7 (182-231)||(36340583-36340632)
chr7 (203-275)||(37353888-37353960)
chr7 (177-257)||(41408784-41408864)
[»] chr6 (45 HSPs)
chr6 (177-275)||(3850473-3850571)
chr6 (178-275)||(24663532-24663629)
chr6 (168-275)||(364523-364630)
chr6 (181-275)||(3621743-3621837)
chr6 (178-275)||(17836046-17836143)
chr6 (178-275)||(12732328-12732425)
chr6 (170-275)||(17123968-17124073)
chr6 (177-275)||(1751421-1751519)
chr6 (177-271)||(22050205-22050299)
chr6 (182-275)||(23923708-23923801)
chr6 (177-275)||(32359430-32359528)
chr6 (177-262)||(30388932-30389017)
chr6 (187-275)||(373876-373964)
chr6 (177-275)||(1252319-1252417)
chr6 (177-275)||(17193311-17193409)
chr6 (177-275)||(30416065-30416163)
chr6 (182-275)||(26470718-26470811)
chr6 (178-257)||(31244740-31244819)
chr6 (182-275)||(8992701-8992795)
chr6 (182-275)||(9017148-9017242)
chr6 (171-275)||(23777449-23777553)
chr6 (177-252)||(53807-53882)
chr6 (181-275)||(26485679-26485773)
chr6 (178-275)||(22784659-22784756)
chr6 (177-257)||(24949278-24949358)
chr6 (181-275)||(8176586-8176680)
chr6 (177-257)||(17251245-17251326)
chr6 (181-257)||(11129002-11129078)
chr6 (177-257)||(11676605-11676685)
chr6 (185-269)||(17601131-17601215)
chr6 (180-275)||(1249692-1249787)
chr6 (181-259)||(9838116-9838194)
chr6 (177-275)||(34730713-34730810)
chr6 (178-254)||(24356045-24356121)
chr6 (178-253)||(19645713-19645788)
chr6 (177-232)||(34379055-34379110)
chr6 (177-275)||(7056130-7056228)
chr6 (177-275)||(34607251-34607349)
chr6 (180-275)||(7632030-7632125)
chr6 (180-257)||(7170323-7170400)
chr6 (177-232)||(33260901-33260956)
chr6 (186-228)||(11000809-11000851)
chr6 (170-272)||(11431140-11431242)
chr6 (176-228)||(32250941-32250993)
chr6 (177-253)||(22400554-22400630)
[»] chr3 (80 HSPs)
chr3 (177-275)||(790703-790801)
chr3 (178-275)||(53745278-53745375)
chr3 (179-275)||(19550399-19550495)
chr3 (177-275)||(34266435-34266533)
chr3 (170-275)||(27992393-27992498)
chr3 (178-275)||(47069853-47069950)
chr3 (177-275)||(29698144-29698242)
chr3 (177-275)||(29803801-29803899)
chr3 (177-275)||(43554542-43554640)
chr3 (170-275)||(6902431-6902536)
chr3 (182-271)||(54898086-54898175)
chr3 (167-271)||(51244781-51244885)
chr3 (177-275)||(29651821-29651919)
chr3 (177-275)||(45101353-45101451)
chr3 (177-275)||(54106416-54106514)
chr3 (168-271)||(46973580-46973683)
chr3 (177-275)||(51219088-51219189)
chr3 (177-275)||(52663595-52663693)
chr3 (178-275)||(24981443-24981540)
chr3 (174-271)||(35315289-35315386)
chr3 (178-265)||(41168918-41169008)
chr3 (177-273)||(43945534-43945630)
chr3 (177-275)||(13158434-13158532)
chr3 (181-275)||(27483787-27483881)
chr3 (181-271)||(32980797-32980887)
chr3 (177-275)||(42671885-42671983)
chr3 (190-275)||(51697571-51697657)
chr3 (178-273)||(36234522-36234614)
chr3 (177-273)||(41425784-41425880)
chr3 (180-275)||(33074276-33074371)
chr3 (178-245)||(45513314-45513381)
chr3 (181-275)||(29458202-29458296)
chr3 (177-275)||(33491134-33491232)
chr3 (167-273)||(40318913-40319019)
chr3 (177-275)||(45145281-45145379)
chr3 (177-275)||(52627233-52627331)
chr3 (177-257)||(20848719-20848799)
chr3 (177-257)||(33874541-33874621)
chr3 (177-259)||(2858572-2858654)
chr3 (178-240)||(13168193-13168255)
chr3 (185-275)||(39866852-39866942)
chr3 (177-275)||(43775385-43775483)
chr3 (177-275)||(40139837-40139927)
chr3 (181-277)||(41926829-41926927)
chr3 (177-257)||(32853355-32853435)
chr3 (178-257)||(52175891-52175969)
chr3 (177-275)||(41351189-41351287)
chr3 (177-265)||(49123688-49123773)
chr3 (183-257)||(51065054-51065128)
chr3 (178-275)||(45055340-45055437)
chr3 (181-258)||(48214225-48214302)
chr3 (177-257)||(3643191-3643271)
chr3 (185-248)||(7329004-7329067)
chr3 (168-258)||(48152155-48152245)
chr3 (185-275)||(54911305-54911394)
chr3 (178-257)||(42515170-42515247)
chr3 (177-232)||(40010659-40010714)
chr3 (178-229)||(52173945-52173995)
chr3 (177-260)||(20105349-20105424)
chr3 (178-224)||(28226620-28226666)
chr3 (186-260)||(28885845-28885919)
chr3 (177-227)||(53290756-53290806)
chr3 (182-275)||(24064-24157)
chr3 (182-259)||(3114390-3114466)
chr3 (176-253)||(47104149-47104226)
chr3 (177-256)||(2642874-2642953)
chr3 (176-232)||(31610080-31610136)
chr3 (168-227)||(35458490-35458549)
chr3 (181-275)||(11473555-11473649)
chr3 (181-275)||(25983662-25983755)
chr3 (177-227)||(30861539-30861589)
chr3 (181-227)||(35077588-35077634)
chr3 (178-232)||(44543727-44543781)
chr3 (181-227)||(47843842-47843888)
chr3 (177-227)||(50092146-50092196)
chr3 (182-275)||(3376304-3376397)
chr3 (184-228)||(26748552-26748596)
chr3 (181-232)||(27039605-27039656)
chr3 (215-273)||(36370861-36370919)
chr3 (186-259)||(17102923-17102996)
[»] scaffold0024 (2 HSPs)
scaffold0024 (178-271)||(49303-49396)
scaffold0024 (180-238)||(89360-89418)
[»] scaffold0040 (1 HSPs)
scaffold0040 (168-275)||(69253-69359)
[»] scaffold0007 (1 HSPs)
scaffold0007 (177-275)||(77241-77339)
[»] scaffold0886 (1 HSPs)
scaffold0886 (177-275)||(4668-4765)
[»] scaffold0014 (1 HSPs)
scaffold0014 (178-275)||(195578-195675)
[»] scaffold0172 (1 HSPs)
scaffold0172 (181-271)||(26121-26211)
[»] scaffold0002 (2 HSPs)
scaffold0002 (177-275)||(148456-148554)
scaffold0002 (178-240)||(138733-138795)
[»] scaffold0343 (1 HSPs)
scaffold0343 (180-257)||(7595-7672)
[»] scaffold0831 (1 HSPs)
scaffold0831 (177-271)||(2964-3060)
[»] scaffold0009 (1 HSPs)
scaffold0009 (177-257)||(147117-147197)
[»] scaffold0274 (1 HSPs)
scaffold0274 (177-275)||(230-327)
[»] scaffold0001 (1 HSPs)
scaffold0001 (185-259)||(419490-419564)
[»] scaffold0135 (1 HSPs)
scaffold0135 (177-257)||(30682-30762)
[»] scaffold0016 (1 HSPs)
scaffold0016 (178-231)||(91867-91920)
[»] scaffold0471 (1 HSPs)
scaffold0471 (177-275)||(1808-1905)
[»] scaffold0006 (1 HSPs)
scaffold0006 (177-228)||(96051-96102)
[»] scaffold0003 (1 HSPs)
scaffold0003 (177-228)||(252794-252845)
[»] scaffold0236 (1 HSPs)
scaffold0236 (177-259)||(14240-14322)
[»] scaffold2146 (1 HSPs)
scaffold2146 (177-259)||(721-803)
[»] scaffold0325 (1 HSPs)
scaffold0325 (181-257)||(486-562)
[»] scaffold0018 (1 HSPs)
scaffold0018 (171-275)||(184111-184215)


Alignment Details
Target: chr1 (Bit Score: 126; Significance: 5e-65; HSPs: 82)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 14 - 172
Target Start/End: Original strand, 39789654 - 39789814
Alignment:
Q  14 gaagacaatatgtataagtactgtagtacgta--gtcatgttcattactaacattagcatatcatcatggaattaattagaatttaccttacagataggt 111  Q
    ||||||| |||||||||||||||  |||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || |    
T  39789654 gaagacagtatgtataagtactgcggtacgtatagtcatgttcattactgacattagcatatcatcatggaattaattagaatttaccttacagacagat 39789753  T
Q  112 atcatgattattttctctaggaattcatataagtttacacgctaaaaaagcttcaaatata 172  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39789754 atcatgattattttctctaggaattcatataagtttacacgctaaaaaagcttcaaatata 39789814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 13566930 - 13566832
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  13566930 ctccgttcctttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagctatatttttactat 13566832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 35531281 - 35531379
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  35531281 ctccgttcctttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagctatacttttactat 35531379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 43500757 - 43500659
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  43500757 ctccgttcctttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagctatacttttactat 43500659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 1024807 - 1024709
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| ||||| |||||||||    
T  1024807 ctccgttcctttttaattgtcacattttgatattttacacaaaccaaaacaatcaacaattgatactacttttgatgcaataaactatacttttactat 1024709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 30686662 - 30686564
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |||||||||    
T  30686662 ctccgttcctttttaattgtcacgttttgatattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagttatacttttactat 30686564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 178 - 275
Target Start/End: Original strand, 8464244 - 8464341
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  8464244 tccgttcctttttaattgtcacattttgacattttacataaaccaagacaatcaacaattgatactacttttgatgcaataagctatacttttactat 8464341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 12231057 - 12231155
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||||||||| || |||||||||    
T  12231057 ctccgttcctttttaattgtcacattttgacattttacataaaccaagacaatcaacaattgatactacttttgatgcaataagctgtacttttactat 12231155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 181 - 275
Target Start/End: Original strand, 19349369 - 19349463
Alignment:
Q  181 gttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  19349369 gttcctttttaattgtcacattctgacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagctatacttttactat 19349463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 29831004 - 29830906
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||| |||||||||||| |||||||||    
T  29831004 ctccgttcctttttaattgtcacattttgacattttacacaaaccaagacaatcaataattgatattacttttgatgcaataagctatacttttactat 29830906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 180 - 275
Target Start/End: Complemental strand, 1429532 - 1429437
Alignment:
Q  180 cgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||| |||||||||||| |||||||||    
T  1429532 cgttcctttttaattgtcacattttgatattttacacaaactaagacaatctacaaatgatactacttttgatgcaataagctatacttttactat 1429437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 38648708 - 38648610
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| ||||||| |||||||||||| |||||||||    
T  38648708 ctccgtttctttttaattgtcacattttgacattttacacaaatcaagacaatcaacaattgatactatttttgatgcaataagctatacttttactat 38648610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 166 - 275
Target Start/End: Complemental strand, 45368350 - 45368241
Alignment:
Q  166 aaatatattaactccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctata 265  Q
    ||||||| || ||| |||| |||||||||||| |||||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  45368350 aaatatactacctcagttcttttttaattgtcgcattttgacattttacacaaaccaaaacaatcaacaattgatactacttttgatgcaataagctata 45368251  T
Q  266 tttttactat 275  Q
     |||||||||    
T  45368250 cttttactat 45368241  T

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Target: chr1; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 1677449 - 1677351
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||| |||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||| || |||||||||||| |||||||||    
T  1677449 ctccgctcctttttaattgtcacattttgacattttacacaaatcaagacaatcaataattgatactacttttaatgcaataagctatacttttactat 1677351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 177 - 271
Target Start/End: Original strand, 20605610 - 20605704
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatattttta 271  Q
    |||| ||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  20605610 ctccattcatttttaattgtcatattttgacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagctatactttta 20605704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 178 - 275
Target Start/End: Original strand, 21927685 - 21927780
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||||||  || ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  21927685 tccgttcctttttaattgtcacatt--gacattttacacaaactaagacaatcaacaattgatactacttttgatgcaataagctatacttttactat 21927780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 181 - 275
Target Start/End: Original strand, 37437043 - 37437137
Alignment:
Q  181 gttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||| |||||||||    
T  37437043 gttcctttttaattgtcatattttgacattttacacaaaccaagacaatcaataattgataccacttttgatgcaataagctatacttttactat 37437137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 167 - 275
Target Start/End: Original strand, 40926729 - 40926837
Alignment:
Q  167 aatatattaactccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatat 266  Q
    |||||| || |||||||| ||||||||||||||||||||| |||||||| ||||||| |||||||| ||||| ||||||||||||||||||||| ||||     
T  40926729 aatatactacctccgttcttttttaattgtcacattttgacattttacataaaccaatacaatcaataattgttactacttttgatacaataagttatac 40926828  T
Q  267 ttttactat 275  Q
    |||||||||    
T  40926829 ttttactat 40926837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 181 - 275
Target Start/End: Complemental strand, 7783197 - 7783103
Alignment:
Q  181 gttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||| |||| | ||||| |||||||||    
T  7783197 gttcctttttaattgtcacattttgacattttatacaaaccaagataatcaacaattgatactacttttgatgcaattaactatacttttactat 7783103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 13508021 - 13507923
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||| ||||||||||| |||||||| ||| |||||||||||| ||||||||||||||| ||| |||||||||||| |||||||||    
T  13508021 ctccgttcctttttaattatcacattttgacattttacataaatcaagacaatcaataattgatactactttggatgcaataagctatacttttactat 13507923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 13515209 - 13515111
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||| ||||||||||| |||||||| ||| |||||||||||| ||||||||||||||| ||| |||||||||||| |||||||||    
T  13515209 ctccgttcctttttaattatcacattttgacattttacataaatcaagacaatcaataattgatactactttggatgcaataagctatacttttactat 13515111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 35483767 - 35483865
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||| ||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||| || ||||||| |||||||||||| |||||||||    
T  35483767 ctccgttcttttttaattgtcatattttgacattttacacaaaccaaaacaatcaacaattgatattatttttgatgcaataagctatacttttactat 35483865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 180 - 277
Target Start/End: Original strand, 31588729 - 31588826
Alignment:
Q  180 cgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactatga 277  Q
    ||||| |||||||||||||||||||   |||||||||||||||||| |||||| |||| ||||||||||||||||||||||||||| |||||||||||    
T  31588729 cgttcttttttaattgtcacattttagcattttacacaaaccaagataatcaaaaattaatactacttttgatacaataagctatacttttactatga 31588826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 171 - 275
Target Start/End: Original strand, 31487759 - 31487863
Alignment:
Q  171 tattaactccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatattttt 270  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |  | ||||||||||||||||||  | |||||||    
T  31487759 tattacctccgttcctttttaattgtcacattttgacattttacacaaaccaagacaatcaataaatattgctacttttgatacaataatttctattttt 31487858  T
Q  271 actat 275  Q
    |||||    
T  31487859 actat 31487863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 177 - 257
Target Start/End: Original strand, 32168298 - 32168378
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaat 257  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || || ||||||||||||||||||    
T  32168298 ctccgttcctttttaattgtcactttttgatattttacacaaaccaagacaatcaataaatggtactacttttgatacaat 32168378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 37609290 - 37609385
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||   |||||||||| |||||||||||| |||||||||    
T  37609290 ctccgttcctttttaattgtcacattttgacattttacataaatcaagacaatcaacaattga---tacttttgatgcaataagctatacttttactat 37609385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 177 - 257
Target Start/End: Complemental strand, 51613662 - 51613582
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaat 257  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  51613662 ctccgttcctttttaattgtcacttttttatattttacacaaaccaagacaatcaataaatgatactacttttgatacaat 51613582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 180 - 275
Target Start/End: Complemental strand, 12124892 - 12124797
Alignment:
Q  180 cgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||||||||||||||||||  |||||||||||| ||||| |||||||||||||| ||||||||||| ||||||| |||| |||||||||    
T  12124892 cgttcctttttaattgtcacattttgccattttacacaaatcaagataatcaacaattgatgctacttttgatgcaataagttatacttttactat 12124797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 168 - 270
Target Start/End: Original strand, 18033803 - 18033904
Alignment:
Q  168 atatattaactccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatt 267  Q
    ||||| || ||||||||||||||||||||||||||||   ||||||| ||||||||||||||||||||||||||||  ||||||| ||||||||||||||    
T  18033803 atatactacctccgttcctttttaattgtcacatttttc-attttacgcaaaccaagacaatcaacaattgatactcattttgatgcaataagctatatt 18033901  T
Q  268 ttt 270  Q
    |||    
T  18033902 ttt 18033904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 178 - 275
Target Start/End: Complemental strand, 49497402 - 49497305
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||||||||||| |||||||||||||||| |||||| |||||||| ||||||||||| || ||||||| ||||||| |||| |||||||||    
T  49497402 tccgttcctttttaattgttacattttgatattttatacaaactaagacaattaacaattgatattatttttgatgcaataagttatacttttactat 49497305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 171 - 275
Target Start/End: Original strand, 19929446 - 19929550
Alignment:
Q  171 tattaactccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatattttt 270  Q
    ||||| ||||||||||||||||||||||  |||| | ||||||||||||||||||||||||| ||||| | ||||||||||| ||||||| |||| ||||    
T  19929446 tattacctccgttcctttttaattgtcattttttaacattttacacaaaccaagacaatcaataattgtttctacttttgatgcaataagttatactttt 19929545  T
Q  271 actat 275  Q
    |||||    
T  19929546 actat 19929550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 176 - 275
Target Start/End: Complemental strand, 44183010 - 44182912
Alignment:
Q  176 actccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||||||||||   ||||||||||||||||||||||||| |||||||| ||| ||||||| |||||| |||| |||||||||    
T  44183010 actccgttcctttttaattgtcacattttagcattttacacaaaccaagacaatcaaaaattgatattac-tttgatataataagatatacttttactat 44182912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 181 - 275
Target Start/End: Complemental strand, 9127916 - 9127822
Alignment:
Q  181 gttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||| |||| || || ||||||||||||||||||||  |||| |||||||||    
T  9127916 gttcctttttaattgtcactttttgacattttacacaaaccaagacattcaataaatgttactacttttgatacaataatatatacttttactat 9127822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 185 - 271
Target Start/End: Original strand, 45226571 - 45226657
Alignment:
Q  185 ctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatattttta 271  Q
    |||||||||||||||||||||| |||||| |||||  |||||||||||||||||||||||||||||||  ||||||||||| |||||    
T  45226571 ctttttaattgtcacattttgacattttatacaaattaagacaatcaacaattgatactacttttgatgtaataagctatactttta 45226657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 178 - 257
Target Start/End: Complemental strand, 5598295 - 5598216
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaat 257  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||  ||||||||||||| ||||    
T  5598295 tccgttcctttttaattgtcatattttgacattttacacaaaccaagacaatcaataattattactacttttgatgcaat 5598216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 180 - 275
Target Start/End: Original strand, 39412500 - 39412595
Alignment:
Q  180 cgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||| |||| | |||||| ||||||||| |||||||| ||||| | ||||||||||| ||||||| ||||||||||||||    
T  39412500 cgttcctttttaattgtcactttttaacattttatacaaaccaaaacaatcaataattgtttctacttttgatgcaataagttatatttttactat 39412595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 2059798 - 2059896
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||| | |||||| ||||| |||||| |||||| ||||||| |||| ||| |||||    
T  2059798 ctccattcctttttaattgtcacattttgacattttacacaaaccaaaataatcaataattgttactacatttgatgcaataagttatactttcactat 2059896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 178 - 264
Target Start/End: Original strand, 49908166 - 49908252
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctat 264  Q
    |||||| |||||||||| ||||||||||| |||||| || ||| ||||||||||||||||||||||||||||||| |||||| ||||    
T  49908166 tccgttactttttaattatcacattttgacattttatacgaactaagacaatcaacaattgatactacttttgatgcaataaactat 49908252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 50825559 - 50825656
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||  |||||||||||||| |||||| ||||| |||||||||||||||||||| |||| ||||||||||||| ||||||| |||| |||||||||    
T  50825559 ctccgtttttttttaattgtcactttttgacatttttcacaaaccaagacaatcaac-attgctactacttttgatgcaataagttatacttttactat 50825656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 178 - 275
Target Start/End: Complemental strand, 52749265 - 52749168
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||| |||||||| || | ||||||| ||||||||| || |||||||||||||||||||||||| ||||||| |||||| ||||| |||||||||    
T  52749265 tccgttcatttttaatcgttatattttgacattttacacgaatcaagacaatcaacaattgatactatttttgatgcaataaactatacttttactat 52749168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 177 - 257
Target Start/End: Original strand, 37735125 - 37735205
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaat 257  Q
    |||||||||||||||||| |||| |||| | ||||||| ||||||||||||||||| || |||||||||||||||||||||    
T  37735125 ctccgttcctttttaattatcactttttcaaattttacgcaaaccaagacaatcaataaatgatactacttttgatacaat 37735205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 177 - 257
Target Start/End: Original strand, 48174659 - 48174738
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaat 257  Q
    |||||||||||||||||| |||| ||||||||||||||||||| |||||||||||| || |||||||| ||||||||||||    
T  48174659 ctccgttcctttttaattatcactttttgatattttacacaaatcaagacaatcaataaatgatacta-ttttgatacaat 48174738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 171 - 275
Target Start/End: Original strand, 51974151 - 51974255
Alignment:
Q  171 tattaactccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatattttt 270  Q
    ||||| ||||||||||||||||||||||| |||||| ||||||||| |||||| ||| |||| || |  ||||||||||||||||||||  |||| ||||    
T  51974151 tattacctccgttcctttttaattgtcactttttgacattttacacgaaccaaaacattcaataaatattactacttttgatacaataatgtatactttt 51974250  T
Q  271 actat 275  Q
    |||||    
T  51974251 actat 51974255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 178 - 257
Target Start/End: Complemental strand, 33720767 - 33720688
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaat 257  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||||  ||||| || |||||||| ||||||||||||    
T  33720767 tccgtttctttttaattgttacattttgatattttacacaaaccaagattatcaataaatgatactatttttgatacaat 33720688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 13699425 - 13699327
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||||||||||| || ||||||| |||||||| ||||||||| | ||||  |||| ||||||||||||| ||||||| |||| |||||||||    
T  13699425 ctccgttcctttttaattgccatattttgacattttacataaaccaagatagtcaatgattgttactacttttgatgcaataagttatacttttactat 13699327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 177 - 259
Target Start/End: Original strand, 35700361 - 35700443
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataa 259  Q
    ||||||||||||||||||||||  || |||||||||||||||| |||||||||||| || || |||||||||||||| |||||    
T  35700361 ctccgttcctttttaattgtcattttgtgatattttacacaaatcaagacaatcaataaatgttactacttttgatataataa 35700443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 177 - 259
Target Start/End: Original strand, 52649715 - 52649797
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataa 259  Q
    ||||||||||||||||||||||| |||||| ||||| ||| || |||||||||||| || || ||||||||||||||||||||    
T  52649715 ctccgttcctttttaattgtcactttttgacatttttcactaatcaagacaatcaataaatgttactacttttgatacaataa 52649797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 182 - 275
Target Start/End: Original strand, 30702281 - 30702374
Alignment:
Q  182 ttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||| |||||| |||||||||||||||| |||||||| || || ||| |||||||||||||||   |||| |||||||||    
T  30702281 ttcctttttaattgtcactttttgacattttacacaaaccaatacaatcaataaatgttaccacttttgatacaatattttatacttttactat 30702374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 177 - 258
Target Start/End: Complemental strand, 32348228 - 32348148
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaata 258  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||| |||||||| || |  |||||||||||||||||||    
T  32348228 ctccgttcctttttaattgtcac-ttttgacattttacacaaaccaatacaatcaataaatattactacttttgatacaata 32348148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 177 - 257
Target Start/End: Original strand, 4100895 - 4100975
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaat 257  Q
    |||||||||||||||||| | || |||||||||||||||||||| ||||||||||| || || || |||||||||||||||    
T  4100895 ctccgttcctttttaattattactttttgatattttacacaaactaagacaatcaataaatgttattacttttgatacaat 4100975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 180 - 259
Target Start/End: Complemental strand, 36850885 - 36850806
Alignment:
Q  180 cgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataa 259  Q
    |||||||||||||||||||  ||||||||||||||||||| ||||||| |||| || || |||||||||||||| |||||    
T  36850885 cgttcctttttaattgtcattttttgatattttacacaaatcaagacagtcaataaatgttactacttttgatataataa 36850806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 182 - 257
Target Start/End: Complemental strand, 42800352 - 42800277
Alignment:
Q  182 ttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaat 257  Q
    |||||||||||||||||| |||||| |||||||||||||||| |||||||| || || ||||||| ||||||||||    
T  42800352 ttcctttttaattgtcactttttgacattttacacaaaccaaaacaatcaataaatgttactactcttgatacaat 42800277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 185 - 275
Target Start/End: Original strand, 32994463 - 32994553
Alignment:
Q  185 ctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||   |||||| ||||||||||||||||||||||||| ||||  ||||||||||||| ||||||| | || |||||||||    
T  32994463 ctttttaattgtctttttttgacattttacacaaaccaagacaatcaataattattactacttttgatgcaataagttgtacttttactat 32994553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 185 - 275
Target Start/End: Complemental strand, 35255729 - 35255639
Alignment:
Q  185 ctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||||||| |||||| |||||||| |||||||||||||||| ||||| |  |||||||||| ||||||| |||  |||||||||    
T  35255729 ctttttaattgtcactttttgacattttacataaaccaagacaatcaataattgtttttacttttgatgcaataagttatgcttttactat 35255639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 177 - 259
Target Start/End: Complemental strand, 36318603 - 36318521
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataa 259  Q
    ||||||||||||||||||||||| |||||| | |||||||||||||| ||| |||| || ||  |||||||||||||||||||    
T  36318603 ctccgttcctttttaattgtcactttttgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 36318521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 174 - 259
Target Start/End: Complemental strand, 10507065 - 10506980
Alignment:
Q  174 taactccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataa 259  Q
    ||||| |||||||||||||||||||  || |||||||||||||||| |||||||||||| || |  ||||||||||||| ||||||    
T  10507065 taactacgttcctttttaattgtcattttgtgatattttacacaaatcaagacaatcaataaatattactacttttgatgcaataa 10506980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 186 - 275
Target Start/End: Original strand, 51972276 - 51972365
Alignment:
Q  186 tttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||| || |||||| ||||||||||||  ||||||||||| | ||| ||||||||||||| ||||||| |||| |||||||||    
T  51972276 tttttaattgttactttttgacattttacacaaattaagacaatcaatagttgttactacttttgatgcaataagttatacttttactat 51972365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 179 - 275
Target Start/End: Complemental strand, 48508382 - 48508286
Alignment:
Q  179 ccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||| |||||||||||||||||||||| |||||| ||||||||| | |||||| || || |  |||||||||||||||||  | ||||||||||||    
T  48508382 ccgtttctttttaattgtcacattttgacattttatacaaaccaaaataatcaataaatgttgttacttttgatacaataatttttatttttactat 48508286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 275
Target Start/End: Complemental strand, 28679264 - 28679174
Alignment:
Q  185 ctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||| ||||||||||| |||||| | |||  |||||||| ||||||| |||||||||||||| ||||||  |||| |||||||||    
T  28679264 ctttttaattatcacattttgacattttatataaattaagacaattaacaatttatactacttttgatgcaataaattatacttttactat 28679174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 257
Target Start/End: Complemental strand, 12721687 - 12721611
Alignment:
Q  181 gttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaat 257  Q
    ||||||||||||||||||| |||| | |||||||| ||||||||||||| || || |  ||||||||||||||||||    
T  12721687 gttcctttttaattgtcactttttaacattttacataaaccaagacaataaataaatattactacttttgatacaat 12721611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 177 - 257
Target Start/End: Complemental strand, 43809155 - 43809075
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaat 257  Q
    ||||||||||||||||||||||| |||| | |||||||| |||  ||||||||||| || || |||| |||||||||||||    
T  43809155 ctccgttcctttttaattgtcactttttaacattttacataaattaagacaatcaataagtgttactgcttttgatacaat 43809075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 259
Target Start/End: Original strand, 19455410 - 19455467
Alignment:
Q  201 ttttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataa 259  Q
    |||||| ||||||||||||||||||||||||| || || ||||||||||||||||||||    
T  19455410 ttttgacattttacacaaaccaagacaatcaataa-tgttactacttttgatacaataa 19455467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 189 - 231
Target Start/End: Complemental strand, 43953017 - 43952975
Alignment:
Q  189 ttaattgtcacattttgatattttacacaaaccaagacaatca 231  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  43953017 ttaattgtcacattttgacattttacacaaaccaagacaatca 43952975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 46096793 - 46096716
Alignment:
Q  181 gttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaata 258  Q
    ||||||| ||||||||||| ||||||||||||| ||| | ||| |||||||| || |  |||||||||||||||||||    
T  46096793 gttccttcttaattgtcactttttgatattttatacacatcaatacaatcaataaatattactacttttgatacaata 46096716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 180 - 232
Target Start/End: Complemental strand, 35605846 - 35605794
Alignment:
Q  180 cgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaa 232  Q
    ||||||||||||||||||||  ||||| |||||||||||||||| ||||||||    
T  35605846 cgttcctttttaattgtcactatttgacattttacacaaaccaatacaatcaa 35605794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 275
Target Start/End: Complemental strand, 10676162 - 10676055
Alignment:
Q  168 atatattaactccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatt 267  Q
    ||||| || ||| |||||||||||||| ||||||||||| |||||||| ||| ||| | | ||||  |||| || |||||||||| ||||||| | || |    
T  10676162 atatactacctctgttcctttttaattatcacattttgacattttacataaatcaatatagtcaatgattgttattacttttgatgcaataagttgtact 10676063  T
Q  268 tttactat 275  Q
    ||||||||    
T  10676062 tttactat 10676055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 9362231 - 9362169
Alignment:
Q  170 atattaactccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaa 232  Q
    |||||| |||||||||||||||| |||||| |||||| |||||| ||||| ||||||| ||||    
T  9362231 atattacctccgttcctttttaactgtcactttttgacattttatacaaatcaagacactcaa 9362169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 275
Target Start/End: Complemental strand, 38597838 - 38597744
Alignment:
Q  181 gttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||| |||||| |||||| ||||||||||||| |||||| |||| || || ||||  || | |||||||||  |||| |||||||||    
T  38597838 gttcctttttaactgtcactttttgacattttacacaaactaagacactcaataaatgttactttttcttatacaataatttatacttttactat 38597744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 227
Target Start/End: Complemental strand, 52759279 - 52759229
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagaca 227  Q
    |||||||| |||||||||||||||||||||  || ||||||||||||||||    
T  52759279 ctccgttcttttttaattgtcacattttgactttatacacaaaccaagaca 52759229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 232
Target Start/End: Original strand, 42787133 - 42787194
Alignment:
Q  171 tattaactccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaa 232  Q
    ||||| ||||||||||||||||||||||  |||||| |||||||  ||| ||||||||||||    
T  42787133 tattacctccgttcctttttaattgtcattttttgacattttacctaaatcaagacaatcaa 42787194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 232
Target Start/End: Original strand, 1039061 - 1039113
Alignment:
Q  180 cgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaa 232  Q
    ||||| |||||||||||||| |||| | |||||||||||| ||||||||||||    
T  1039061 cgttcttttttaattgtcactttttaacattttacacaaatcaagacaatcaa 1039113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 232
Target Start/End: Original strand, 1045967 - 1046019
Alignment:
Q  180 cgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaa 232  Q
    ||||| |||||||||||||| |||| | |||||||||||| ||||||||||||    
T  1045967 cgttcttttttaattgtcactttttaacattttacacaaatcaagacaatcaa 1046019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 232
Target Start/End: Complemental strand, 15660831 - 15660783
Alignment:
Q  184 cctttttaattgtcacattttgatattttacacaaaccaagacaatcaa 232  Q
    ||||||||| | |||| ||||||||||||||||||||||||||| ||||    
T  15660831 cctttttaactatcactttttgatattttacacaaaccaagacactcaa 15660783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 227
Target Start/End: Original strand, 22154626 - 22154674
Alignment:
Q  180 cgttcctttttaattgtcacattttga-tattttacacaaaccaagaca 227  Q
    ||||||||||||||||||||||||||| | |||||||||||| ||||||    
T  22154626 cgttcctttttaattgtcacattttgacttttttacacaaactaagaca 22154674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 228
Target Start/End: Complemental strand, 45230769 - 45230717
Alignment:
Q  176 actccgttcctttttaattgtcacattttgatattttacacaaaccaagacaa 228  Q
    |||| |||||||||||||||| |||||||||  ||||||| ||||||||||||    
T  45230769 actctgttcctttttaattgttacattttgactttttacataaaccaagacaa 45230717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 225
Target Start/End: Original strand, 48264762 - 48264810
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaaga 225  Q
    ||||||| ||||||||||||||||||||||  ||||| |||||||||||    
T  48264762 ctccgtttctttttaattgtcacattttgacgttttatacaaaccaaga 48264810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 178 - 253
Target Start/End: Original strand, 31570624 - 31570699
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgata 253  Q
    ||||||||||||||| |||||| ||  |  |||||||||||||||| ||| |||| || || ||||||||||||||    
T  31570624 tccgttcctttttaagtgtcactttaaggcattttacacaaaccaatacattcaataaatgttactacttttgata 31570699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 18344577 - 18344479
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||| |||||||||||||| |||| | |||||||||||| ||| | ||| || || |  ||| |||||||||||||||   |||| |||||||||    
T  18344577 ctccgttcatttttaattgtcactttttaacattttacacaaatcaatataattaataaatattaccacttttgatacaatactttatacttttactat 18344479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 253
Target Start/End: Complemental strand, 17013686 - 17013601
Alignment:
Q  168 atatattaactccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgata 253  Q
    ||||| || |||||||||||||||| |||||  ||   | |||||||||||||||| ||| |||| || || ||||||||||||||    
T  17013686 atatactacctccgttcctttttaagtgtcaatttaaaacattttacacaaaccaatacattcaataaatgttactacttttgata 17013601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 223
Target Start/End: Original strand, 15675317 - 15675369
Alignment:
Q  171 tattaactccgttcctttttaattgtcacattttgatattttacacaaaccaa 223  Q
    |||| ||||| |||||||||||||||||| |||||| |||||  |||||||||    
T  15675317 tattcactccattcctttttaattgtcactttttgacattttttacaaaccaa 15675369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 225
Target Start/End: Complemental strand, 41155521 - 41155477
Alignment:
Q  181 gttcctttttaattgtcacattttgatattttacacaaaccaaga 225  Q
    |||||||||||||||||  ||||||| |||||||||||| |||||    
T  41155521 gttcctttttaattgtcttattttgacattttacacaaatcaaga 41155477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 273
Target Start/End: Complemental strand, 44818645 - 44818609
Alignment:
Q  237 tgatactacttttgatacaataagctatatttttact 273  Q
    |||||||||||||||| |||||||||||| |||||||    
T  44818645 tgatactacttttgatgcaataagctatagttttact 44818609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 92; Significance: 9e-45; HSPs: 82)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 168 - 275
Target Start/End: Original strand, 38482772 - 38482879
Alignment:
Q  168 atatattaactccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatt 267  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  38482772 atatactacctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagctatact 38482871  T
Q  268 tttactat 275  Q
    ||||||||    
T  38482872 tttactat 38482879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 34982080 - 34981982
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||| |||||||||    
T  34982080 ctccgttcctttttaattgtcacattttgatattttacacaaaccaaaacaatcaacaattaatactacttttgatgcaataagctatacttttactat 34981982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 35052304 - 35052206
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||||||    
T  35052304 ctccgttcctttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactatttttgatgcaataagctatacttttactat 35052206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 180 - 275
Target Start/End: Original strand, 33935052 - 33935147
Alignment:
Q  180 cgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||    
T  33935052 cgttcctttttaattgtcacattttgacattttacacaaaccaagacaatcaataattgatactacttttgatgcaataagctataattttactat 33935147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 26062958 - 26062860
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||| ||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  26062958 ctccattcctttttaattgtcacattttgacattttacacaaatcaagataatcaacaattgatactacttttgatgcaataagctatatttttactat 26062860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 38128536 - 38128634
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  38128536 ctccgttcctttttaattgttacattttgacattttatacaaaccaagacaatcaacaattgatactacttttgatgcaataagctatacttttactat 38128634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 178 - 275
Target Start/End: Complemental strand, 11994131 - 11994034
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||| |||||||||||| |||||||||    
T  11994131 tccgttcctttttaattgtcacattttgacattttacacaaatcaagacaataaacaattgatactacttttgatgcaataagctatacttttactat 11994034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 174 - 275
Target Start/End: Complemental strand, 14263798 - 14263697
Alignment:
Q  174 taactccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttact 273  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||| |||||||    
T  14263798 taactccgttcttttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatattacttttgatgcaataagttatacttttact 14263699  T
Q  274 at 275  Q
    ||    
T  14263698 at 14263697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 39303504 - 39303603
Alignment:
Q  177 ctccgttcctttttaatt-gtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  39303504 ctccgttcctttttaatttgtcacattttgacattttacacaaatcaagacaatcaacaattgatactacttttgatgcaataagctatacttttactat 39303603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 13328221 - 13328123
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||| |||||||||| |||| |||||||||    
T  13328221 ctccgttcctttttaattgtcacattttgacattttacacaaactaagacaatcaaaaattgatactacttttaatacaataagttatacttttactat 13328123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 14228311 - 14228409
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||   |||||||||| |||||||||    
T  14228311 ctccgttcatttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactacttttgatgtcataagctatacttttactat 14228409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 168 - 275
Target Start/End: Original strand, 45281358 - 45281465
Alignment:
Q  168 atatattaactccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatt 267  Q
    ||||| || ||||||||| |||||||||||||||||| | |||||||||||||||||| |||||||||||||||||||||||||| |||||| ||||| |    
T  45281358 atatactagctccgttcccttttaattgtcacattttaacattttacacaaaccaagataatcaacaattgatactacttttgatgcaataaactatact 45281457  T
Q  268 tttactat 275  Q
    ||||||||    
T  45281458 tttactat 45281465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 181 - 275
Target Start/End: Complemental strand, 4057535 - 4057441
Alignment:
Q  181 gttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| || | |||||||||| |||||||||    
T  4057535 gttcctttttaattgtcacattttgacattttacacaaaccaagacaattaacaattgatactactttttatgccataagctatacttttactat 4057441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 23430160 - 23430062
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||| |||||||||||| |||||||||| | |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  23430160 ctccattcctttttaatcgtcacattttaacattttacacaaatcaagacaatcaacaattgatactacttttgatgcaataagctatacttttactat 23430062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 181 - 271
Target Start/End: Original strand, 23848549 - 23848639
Alignment:
Q  181 gttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatattttta 271  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||    
T  23848549 gttcctttttaattgtcacattttgacatttgacacaaaccaagacaatcaataattgatactacttttgatgcaataaactatattttta 23848639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 178 - 275
Target Start/End: Complemental strand, 16656950 - 16656853
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||||| |||||| ||||| |||||||||    
T  16656950 tccgtttctttttaattgtcacattttgacattttacacaaaccaagacactcaacaattgatactaattttgatgcaataaactatacttttactat 16656853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 182 - 275
Target Start/End: Complemental strand, 40228541 - 40228448
Alignment:
Q  182 ttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| ||||||| ||||||||| || |||||||||    
T  40228541 ttcctttttaattgtcacattttgacgttttacacaaaccaagacaatcaacaattgatactatttttgatgcaataagctgtacttttactat 40228448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 25703567 - 25703665
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||| |||||||||||||||||||||| |||||||||||| ||||| ||||||||||| ||||||||||| || |||||||||||| |||||||||    
T  25703567 ctccgtttctttttaattgtcacattttgacattttacacaaaacaagataatcaacaattaatactactttttatgcaataagctatacttttactat 25703665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 25812738 - 25812836
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||| |||||||||||||||||||||| |||||||||||| ||||| ||||||||||| ||||||||||| || |||||||||||| |||||||||    
T  25812738 ctccgtttctttttaattgtcacattttgacattttacacaaaacaagataatcaacaattaatactactttttatgcaataagctatacttttactat 25812836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 179 - 275
Target Start/End: Complemental strand, 34047100 - 34047004
Alignment:
Q  179 ccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||| ||||||| |||||| ||||| |||||||||    
T  34047100 ccgtacctttttaattgtcacattttgacattttacacaaaccaagaatatcaacaattgatactatttttgatgcaataaactatacttttactat 34047004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 185 - 275
Target Start/End: Original strand, 1202441 - 1202531
Alignment:
Q  185 ctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||| ||||||| ||||||| |||| |||||||||    
T  1202441 ctttttaattgtcacattttaacattttacacaaatcaagacaatcaacaattgatactatttttgatgcaataagttatacttttactat 1202531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 15596595 - 15596497
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||||| || ||||||| || ||||||| |||| |||||||||    
T  15596595 ctccgttcctttttaattgtcacattttgacattttacacaaaccaagataatcaataattgttattactttttatgcaataagttatacttttactat 15596497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 18842780 - 18842682
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||| |||||| || || ||||||||||||||||||||  | ||||||||||||    
T  18842780 ctccgttcctttttaattgtcacattttgacattttacacaaatcaagataatcaataaatgttactacttttgatacaataatttttatttttactat 18842682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 178 - 275
Target Start/End: Complemental strand, 1245562 - 1245465
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||| |||||| |||||||| ||| |||||||||||| ||||| ||||||||||||| ||||||| |||| |||||||||    
T  1245562 tccgttcctttttaattgtcactttttgacattttacataaatcaagacaatcaataattgttactacttttgattcaataagttatacttttactat 1245465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 177 - 273
Target Start/End: Original strand, 2888457 - 2888553
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttact 273  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||||||||| || || | ||||||||||||||||||  | ||||||||||    
T  2888457 ctccgttcctttttaattgtcacattttaacattttacacaaaccaagacaatcaataaatgttgctacttttgatacaataatttctatttttact 2888553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 177 - 259
Target Start/End: Original strand, 8453225 - 8453307
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataa 259  Q
    |||||||||||||||||||||||||||||| ||||||||||||| |||| |||||| ||||| ||||||||||||| ||||||    
T  8453225 ctccgttcctttttaattgtcacattttgacattttacacaaactaagataatcaataattgttactacttttgatgcaataa 8453307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 182 - 272
Target Start/End: Complemental strand, 9954895 - 9954805
Alignment:
Q  182 ttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttac 272  Q
    ||||||||||||||||| ||||| | |||||||| ||||||||||||||||||||||||| |||||||||| ||||||| |||| ||||||    
T  9954895 ttcctttttaattgtcatattttaacattttacataaaccaagacaatcaacaattgatattacttttgatgcaataagttatacttttac 9954805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 14061138 - 14061236
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||||||||||||||| |||| | ||||||||||||||||||||||||| || |  ||||||||||||||||||||  |||| |||||||||    
T  14061138 ctccgttcctttttaattgtcactttttaacattttacacaaaccaagacaatcaataaatattactacttttgatacaataatttatacttttactat 14061236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 181 - 275
Target Start/End: Original strand, 43641982 - 43642076
Alignment:
Q  181 gttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||||||||||| |||||| ||||||||||||| ||||||||||| ||||| ||||||||||||| ||||||  |||| |||||||||    
T  43641982 gttcctttttaattgtcactttttgacattttacacaaactaagacaatcaataattgttactacttttgatgcaataaattatacttttactat 43642076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 180 - 257
Target Start/End: Original strand, 26740129 - 26740206
Alignment:
Q  180 cgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaat 257  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||||||| || || ||||||||||||||||||    
T  26740129 cgttcctttttaattgtcactttttgacattttacacaaaccaagacaatcaataagtgttactacttttgatacaat 26740206  T

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Target: chr8; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 180 - 275
Target Start/End: Original strand, 8554008 - 8554103
Alignment:
Q  180 cgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||| |||||||||||||||| |||||||||||| |||||||||||| || || | ||||||||||||||||||  | ||||||||||||    
T  8554008 cgttccttttcaattgtcacattttgacattttacacaaatcaagacaatcaataaatgttgctacttttgatacaataatttttatttttactat 8554103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 17074571 - 17074669
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||||||||| || |  | ||||||||||| ||||||  | ||||||||||||    
T  17074571 ctccgttcctttttaattgtcacattttaacattttacacaaaccaagacaatcaataaatattgctacttttgatgcaataatttttatttttactat 17074669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 17573699 - 17573601
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||||||||| || |  | ||||||||||| ||||||  | ||||||||||||    
T  17573699 ctccgttcctttttaattgtcacattttaacattttacacaaaccaagacaatcaataaatattgctacttttgatgcaataatttttatttttactat 17573601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 18291714 - 18291616
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||||||||||| |||||||| ||| ||||| | ||||  |||| ||||||||||||| ||||||| |||| |||||||||    
T  18291714 ctccgttcctttttaattgtcacattttgacattttacaaaaatcaagatagtcaatgattgttactacttttgatgcaataagttatacttttactat 18291616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 178 - 275
Target Start/End: Original strand, 32010074 - 32010171
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||| |||||||||||||| |||| | ||||| ||||||||||||||||||| ||||| ||||||||||||| ||||||  |||| |||||||||    
T  32010074 tccgttcatttttaattgtcactttttaacatttttcacaaaccaagacaatcaataattgctactacttttgatgcaataatttatacttttactat 32010171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 41308147 - 41308048
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttga-tacaataagctatatttttactat 275  Q
    ||||||| |||||||||||||| ||||||| |||||||| | ||||||||||| || ||||| |||||||||||| | ||||||| |||| |||||||||    
T  41308147 ctccgtttctttttaattgtcatattttgacattttacatataccaagacaattaataattgttactacttttgattgcaataagttatacttttactat 41308048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 12248759 - 12248857
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||||||||||| ||  |||||| ||||||||| |||||||||| |||| || |  ||||||||||||||||||||  |||| |||||||||    
T  12248759 ctccgttcctttttaattgacagtttttgacattttacacgaaccaagacattcaataaatattactacttttgatacaataatatatacttttactat 12248857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 181 - 275
Target Start/End: Original strand, 12342607 - 12342701
Alignment:
Q  181 gttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||| ||||||| |||||||| ||||||||| | ||||  |||| ||||||||||||| ||||||| | || |||||||||    
T  12342607 gttcctttttaattgtcatattttgacattttacataaaccaagatagtcaatgattgttactacttttgatgcaataagttgtacttttactat 12342701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 177 - 259
Target Start/End: Complemental strand, 31964820 - 31964738
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataa 259  Q
    |||||||||| |||||||||||  || ||| ||||||||||||||||||||||||| || || ||||| ||||||||||||||    
T  31964820 ctccgttcctctttaattgtcattttatgacattttacacaaaccaagacaatcaataaatgttactatttttgatacaataa 31964738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 185 - 275
Target Start/End: Original strand, 39615450 - 39615539
Alignment:
Q  185 ctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| || || || |  |||||||||||||||||  | ||||||||||||    
T  39615450 ctttttaattgtcacattttgatattttacataaaccaagacaattaataa-tgttgttacttttgatacaataatttttatttttactat 39615539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 177 - 259
Target Start/End: Complemental strand, 43553290 - 43553208
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataa 259  Q
    ||||||| ||||||||||||| | || ||| ||||||| ||||||||||||||||| || || ||||||||||||||||||||    
T  43553290 ctccgtttctttttaattgtcgctttgtgacattttacgcaaaccaagacaatcaataaatgttactacttttgatacaataa 43553208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 177 - 257
Target Start/End: Original strand, 14511418 - 14511499
Alignment:
Q  177 ctccgttcctttt-taattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaat 257  Q
    ||||||||||||| |||||||||| |||||| |||||||||||||||||||||| || || || ||||| ||||||||||||    
T  14511418 ctccgttccttttttaattgtcactttttgaaattttacacaaaccaagacaattaataaatgttactatttttgatacaat 14511499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 178 - 257
Target Start/End: Complemental strand, 8672744 - 8672665
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaat 257  Q
    |||||||||||||||||||||  ||||||||||||||||||||||| | |||||| || || || || ||||||||||||    
T  8672744 tccgttcctttttaattgtcattttttgatattttacacaaaccaaaataatcaataaatgttattatttttgatacaat 8672665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 35296295 - 35296240
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaa 232  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||    
T  35296295 ctccgttcctttttaactgtcactttttgatattttacacaaaccaagacactcaa 35296240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 23855808 - 23855710
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||||||||| ||||  |||||| |||||||| ||||||| |||||||| || |  ||||||||||||||||||| |  ||| |||||||||    
T  23855808 ctccgttcctttttaatcgtcattttttgacattttacataaaccaatacaatcaataaatattactacttttgatacaatacgtcatacttttactat 23855710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 178 - 275
Target Start/End: Complemental strand, 10180620 - 10180523
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||| |||||||||||||| ||||||| |||||||| ||| ||||| | ||||  |||| ||||||||||||| ||||||| | || |||||||||    
T  10180620 tccgtttctttttaattgtcatattttgacattttacataaatcaagatagtcaatgattgttactacttttgatgcaataagttgtacttttactat 10180523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 174 - 259
Target Start/End: Original strand, 21651732 - 21651817
Alignment:
Q  174 taactccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataa 259  Q
    |||||||||| |||||||||||||||||||||| |||||||| ||||||||| |  |||  || | ||||||||||||| ||||||    
T  21651732 taactccgtttctttttaattgtcacattttgacattttacataaaccaagatagccaatgatcgttactacttttgatgcaataa 21651817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 29091075 - 29091148
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttga 251  Q
    ||||||| |||||||||||||| |||||| |||||||||||| |||||||||||| || |  ||||||||||||    
T  29091075 tccgttcttttttaattgtcactttttgacattttacacaaatcaagacaatcaataaatattactacttttga 29091148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 177 - 257
Target Start/End: Original strand, 27911661 - 27911741
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaat 257  Q
    |||||| ||||||||| ||| |  |||||| |||||||||||| |||||||||||| || || ||||||||||||||||||    
T  27911661 ctccgtacctttttaagtgttattttttgacattttacacaaatcaagacaatcaataaatgttactacttttgatacaat 27911741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 177 - 257
Target Start/End: Original strand, 27958080 - 27958160
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaat 257  Q
    |||||| ||||||||| ||| |  |||||| |||||||||||| |||||||||||| || || ||||||||||||||||||    
T  27958080 ctccgtacctttttaagtgttattttttgacattttacacaaatcaagacaatcaataaatgttactacttttgatacaat 27958160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 45317901 - 45317853
Alignment:
Q  179 ccgttcctttttaattgtcacattttgatattttacacaaaccaagaca 227  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||    
T  45317901 ccgttcctttttaattgtcacattttgactttttacacaaaccaagaca 45317853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 13174180 - 13174125
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaa 232  Q
    |||||||||||||||| |||||| |||||| |||||||||||||||||||| ||||    
T  13174180 ctccgttcctttttaactgtcactttttgacattttacacaaaccaagacactcaa 13174125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 36111932 - 36112028
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||| ||||||  ||||| |||||||||||||||||||| |||| || || ||||  || | ||||||||| ||||| |||||||||    
T  36111932 ctccgttcctttttaactgtcac--tttgacattttacacaaaccaagacactcaataaatgttactttttcttatacaataatctatacttttactat 36112028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 227
Target Start/End: Complemental strand, 7483993 - 7483943
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagaca 227  Q
    |||||||||||||||| |||||| |||||||||||||||||||| ||||||    
T  7483993 ctccgttcctttttaactgtcactttttgatattttacacaaactaagaca 7483943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 227
Target Start/End: Complemental strand, 30205706 - 30205657
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagaca 227  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  30205706 ctccgttcctttt-aattgtcacattttgattttttacacaaaccaagaca 30205657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 36058483 - 36058385
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||||||||||||| |||||||| |||||||| |||  || | | ||||  |||| ||||||||||||| ||||||| | || |||||||||    
T  36058483 ctccgttcctttttaattgtcgcattttgacattttacataaattaaaatagtcaatgattgttactacttttgatgcaataagttgtacttttactat 36058385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 257
Target Start/End: Complemental strand, 3720940 - 3720851
Alignment:
Q  168 atatattaactccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaat 257  Q
    ||||| || ||||||||||||||||||||||| |||| | ||||||||||||| || |||||||| || |   ||| |||||||||||||    
T  3720940 atatactatctccgttcctttttaattgtcactttttaacattttacacaaactaaaacaatcaataagtttgactgcttttgatacaat 3720851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 277
Target Start/End: Original strand, 40603871 - 40603940
Alignment:
Q  208 attttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactatga 277  Q
    |||||| ||||| |||||||||||||||||||||||| |||||||  ||||| ||| | |||||||||||    
T  40603871 attttatacaaatcaagacaatcaacaattgatactatttttgatgtaataaactaaacttttactatga 40603940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 177 - 273
Target Start/End: Original strand, 11707443 - 11707539
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttact 273  Q
    ||||||| |||||||||||||| ||||| | |||||||| |||  ||||||||||| ||||  |||||||||||||  | |||| |||| |||||||    
T  11707443 ctccgtttctttttaattgtcatatttttacattttacataaattaagacaatcaataattattactacttttgatgtattaagttatacttttact 11707539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 210 - 257
Target Start/End: Complemental strand, 17718721 - 17718674
Alignment:
Q  210 tttacacaaaccaagacaatcaacaattgatactacttttgatacaat 257  Q
    ||||||||||||||||||||||| ||||| ||||| ||||||||||||    
T  17718721 tttacacaaaccaagacaatcaataattgttactatttttgatacaat 17718674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 19972530 - 19972475
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaa 232  Q
    ||||||||||||||||  ||||| |||||| |||||||||||||||||||| ||||    
T  19972530 ctccgttcctttttaacggtcactttttgacattttacacaaaccaagacactcaa 19972475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 21020303 - 21020358
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaa 232  Q
    ||||||||||||||||  ||||| |||||| |||||||||||||||||||| ||||    
T  21020303 ctccgttcctttttaacggtcactttttgacattttacacaaaccaagacactcaa 21020358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 41701471 - 41701526
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaa 232  Q
    |||||||||||||||| |||||| |||| |||||||||||||| ||||||| ||||    
T  41701471 ctccgttcctttttaactgtcactttttaatattttacacaaatcaagacactcaa 41701526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 275
Target Start/End: Original strand, 2456112 - 2456202
Alignment:
Q  185 ctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||| |||||||||||| |||||||| ||| ||| | | ||||  |||| ||||||||||||| ||||||| | || |||||||||    
T  2456112 ctttttaatcgtcacattttgacattttacataaatcaatatagtcaatgattgttactacttttgatgcaataagttgtacttttactat 2456202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 232
Target Start/End: Complemental strand, 38222066 - 38222008
Alignment:
Q  174 taactccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaa 232  Q
    |||||||||||||||||||  ||||| |||||| | |||||||||||||||||| ||||    
T  38222066 taactccgttcctttttaacggtcactttttgacactttacacaaaccaagacattcaa 38222008  T

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Target: chr8; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 259
Target Start/End: Original strand, 41643479 - 41643561
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataa 259  Q
    |||||||| ||||||||||| |  |||||| |||||||||||||||| | | |||| || || |||||||||||||| |||||    
T  41643479 ctccgttcatttttaattgtaattttttgacattttacacaaaccaataaagtcaataaatgttactacttttgatataataa 41643561  T

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Target: chr8; HSP #67
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 223
Target Start/End: Complemental strand, 6661199 - 6661158
Alignment:
Q  182 ttcctttttaattgtcacattttgatattttacacaaaccaa 223  Q
    |||||||||||||||||||||||||  |||||||||||||||    
T  6661199 ttcctttttaattgtcacattttgactttttacacaaaccaa 6661158  T

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Target: chr8; HSP #68
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 223
Target Start/End: Complemental strand, 6741601 - 6741560
Alignment:
Q  182 ttcctttttaattgtcacattttgatattttacacaaaccaa 223  Q
    |||||||||||||||||||||||||  |||||||||||||||    
T  6741601 ttcctttttaattgtcacattttgactttttacacaaaccaa 6741560  T

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Target: chr8; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 275
Target Start/End: Complemental strand, 3513558 - 3513510
Alignment:
Q  227 aatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||| |||||||| |||||||||||||||||||||||  ||||||||    
T  3513558 aatcaaaaattgatattacttttgatacaataagctatacatttactat 3513510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 11163517 - 11163466
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgata-ttttacacaaaccaagacaa 228  Q
    ||||||||||||||||||||||| |||||| | ||||||||||||||||||||    
T  11163517 ctccgttcctttttaattgtcac-ttttgagatttttacacaaaccaagacaa 11163466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 229
Target Start/End: Original strand, 23793264 - 23793312
Alignment:
Q  181 gttcctttttaattgtcacattttgatattttacacaaaccaagacaat 229  Q
    ||||||||||||||||||  |||| | ||||||||||||||||||||||    
T  23793264 gttcctttttaattgtcattttttaacattttacacaaaccaagacaat 23793312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 232
Target Start/End: Complemental strand, 1739940 - 1739889
Alignment:
Q  181 gttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaa 232  Q
    ||||||||||||||||||| |||||| |||||||| ||| ||| ||||||||    
T  1739940 gttcctttttaattgtcactttttgacattttacataaatcaacacaatcaa 1739889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 6757657 - 6757602
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaa 232  Q
    |||||||||||||| | |||||| |||||| |||||||||||| ||||||| ||||    
T  6757657 ctccgttccttttttactgtcactttttgacattttacacaaatcaagacactcaa 6757602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 228
Target Start/End: Complemental strand, 11727829 - 11727782
Alignment:
Q  181 gttcctttttaattgtcacattttgatattttacacaaaccaagacaa 228  Q
    ||||||||||||||||| |||||| |  ||||||||||||||||||||    
T  11727829 gttcctttttaattgtcgcattttaactttttacacaaaccaagacaa 11727782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 208 - 275
Target Start/End: Original strand, 35498090 - 35498157
Alignment:
Q  208 attttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||||||||||||||  | || || |||||||||||||| |||||  |||| |||||||||    
T  35498090 attttacacaaaccaagacaattcataaatgttactacttttgatataataatttatacttttactat 35498157  T

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Target: chr8; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 167470 - 167548
Alignment:
Q  181 gttcctttttaattgtcacattttgat-attttacacaaaccaagacaatcaacaattgatactacttttgatacaata 258  Q
    ||||||||||||||||||| |||| |  |||| ||||||||||| | |||||| || |  |||||||||||||||||||    
T  167470 gttcctttttaattgtcacttttttaacatttcacacaaaccaatataatcaataaatattactacttttgatacaata 167548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 8730818 - 8730916
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||| ||||||||||| || ||| |||| | |||||||||||||||||||| |||| || || ||||  || | |||||||||  |||| |||||||||    
T  8730818 ctccattcctttttaagtgccactttttaacattttacacaaaccaagacactcaataaatgttactttttcttatacaataatttatacttttactat 8730916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 260
Target Start/End: Complemental strand, 33314790 - 33314712
Alignment:
Q  182 ttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataag 260  Q
    |||||||||||||||| |||||||| |||||||| ||||||| | | ||||  |||| ||||| |||| || |||||||    
T  33314790 ttcctttttaattgtcgcattttgacattttacataaaccaatatagtcaatgattgttactattttttatgcaataag 33314712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 275
Target Start/End: Original strand, 7605894 - 7605986
Alignment:
Q  182 ttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||||||| |  |||| | |||||||||||| |||||||||||| |||   || ||||||| || ||||||| |||| |||||||||    
T  7605894 ttcctttttaattgttat-ttttaacattttacacaaatcaagacaatcaataatcattattacttttaatgcaataagttatacttttactat 7605986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 215
Target Start/End: Complemental strand, 17718954 - 17718909
Alignment:
Q  170 atattaactccgttcctttttaattgtcacattttgatattttaca 215  Q
    |||||| || |||||||||||||||||||| |||||| ||||||||    
T  17718954 atattaccttcgttcctttttaattgtcactttttgacattttaca 17718909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 225
Target Start/End: Original strand, 9301533 - 9301580
Alignment:
Q  178 tccgttcctttttaattgtcacattttga-tattttacacaaaccaaga 225  Q
    |||||||||||||||||||||| |||||| | |||||||||||||||||    
T  9301533 tccgttcctttttaattgtcac-ttttgagttttttacacaaaccaaga 9301580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 223
Target Start/End: Complemental strand, 40608287 - 40608243
Alignment:
Q  179 ccgttcctttttaattgtcacattttgatattttacacaaaccaa 223  Q
    ||||| ||||||||||||||||||||||  || ||||||||||||    
T  40608287 ccgttgctttttaattgtcacattttgactttctacacaaaccaa 40608243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 92; Significance: 9e-45; HSPs: 93)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 168 - 275
Target Start/End: Complemental strand, 39073286 - 39073179
Alignment:
Q  168 atatattaactccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatt 267  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  39073286 atatactacctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagctatact 39073187  T
Q  268 tttactat 275  Q
    ||||||||    
T  39073186 tttactat 39073179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 166 - 275
Target Start/End: Complemental strand, 34261556 - 34261447
Alignment:
Q  166 aaatatattaactccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctata 265  Q
    ||||||| || ||| |||||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34261556 aaatatactacctctgttcctttttaattgtcatattttgacattttagacaaaccaagacaatcaacaattgatactacttttgatacaataagctata 34261457  T
Q  266 tttttactat 275  Q
    ||||||||||    
T  34261456 tttttactat 34261447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 2673964 - 2674062
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||||    
T  2673964 ctccgttcctttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatattacttttgatgcaataagctatacttttactat 2674062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 4175466 - 4175564
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  4175466 ctccgttcctttttaattgtcacattttgacattttacacaaagcaagacaataaacaattgatactacttttgatacaataagctatacttttactat 4175564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 38910506 - 38910408
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||    
T  38910506 ctccgttcctttttaattgtcacattttgacattttacacaaaccaagataatcaacaattgatactacttttgatgcaataagctatacttttactat 38910408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 10359222 - 10359321
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactatga 277  Q
    |||||| |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  10359222 tccgtttctttttaattgtcacattttgacattttacacaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactatga 10359321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 1087919 - 1088017
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  1087919 ctccgtttctttttaattgtcacattttaacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataaactatatttttactat 1088017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 25344193 - 25344095
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  25344193 ctccgttcctttttaattgtcacattttgtcattttacacaaatcaagacaatcaacaattgatcctacttttgatgcaataagctatatttttactat 25344095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 178 - 275
Target Start/End: Original strand, 18020755 - 18020852
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| || |||||||||||| |||||||||    
T  18020755 tccgttcctttttaattgtcacattttgacattttacacagaccaagacaatcaacaattgatactacttttaatgcaataagctatacttttactat 18020852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 180 - 275
Target Start/End: Original strand, 26854084 - 26854179
Alignment:
Q  180 cgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||| |||||||||    
T  26854084 cgttcctttttaattgtcacattttgacattttacacaaaccaagataatcaataattgatactacttttgatgcaataagctatacttttactat 26854179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 180 - 275
Target Start/End: Complemental strand, 38702371 - 38702276
Alignment:
Q  180 cgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  38702371 cgttcctttttaattgtcatattttaatattttacataaaccaagacaatcaacaattgatactacttttgatgcaataagctatacttttactat 38702276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 180 - 275
Target Start/End: Complemental strand, 42911780 - 42911685
Alignment:
Q  180 cgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||| |||| |||||||||    
T  42911780 cgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaataattgttactacttttgatgcaataagttatacttttactat 42911685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 8825290 - 8825192
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||| |||||||||    
T  8825290 ctccgttcctttttaattatcacattttgacattttacacaaatcaagacaatcaacaattgatactacttttgatgcaataaactatacttttactat 8825192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 12869885 - 12869983
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||| |||| |||||||||    
T  12869885 ctccgttcatttttaattgtcacattttgatattttatacaaaccaagataatcaacaattgatactacttttgatgcaataagttatacttttactat 12869983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 178 - 275
Target Start/End: Original strand, 6754166 - 6754263
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||  |||||||||| |||||||||||| |||||||||    
T  6754166 tccgttcctttttaattgtcacattttgacattttacacaaaccaagacaatcaataattgatcatacttttgatgcaataagctatacttttactat 6754263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 7579653 - 7579752
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactac-ttttgatacaataagctatatttttactat 275  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| | |||||| ||||| |||||||||    
T  7579653 ctccgttcctttttaattgtcacattttgatattttacacaaaccaaaacaatcaacaattgatactactttttgttgcaataaactatacttttactat 7579752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 180 - 275
Target Start/End: Complemental strand, 38363419 - 38363324
Alignment:
Q  180 cgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||| |||||||||    
T  38363419 cgttcctttttaattgtcacaatttgacattttacacaaaccaagacaatcaacaattgatactaattttgatgcaataaactatacttttactat 38363324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 4098564 - 4098466
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||  ||||||||    
T  4098564 ctccgtttctttttaattgtcacattttgacattttacacaaaccaagacaatcaaaaattgatattacttttgatacaataagttatacctttactat 4098466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 4985161 - 4985259
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||||||||||| | ||| ||||||||||||| ||||||| ||||||||||||||    
T  4985161 ctccgttcctttttaattgtcacattttgacattttacacataccaagacaatcaatagttgttactacttttgatgcaataagttatatttttactat 4985259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 178 - 275
Target Start/End: Complemental strand, 7404084 - 7403987
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| ||||||| ||||||  |||| |||||||||    
T  7404084 tccgttcctttttaattgtcacattttgatattttacataaaccaagataatcaacaattgatactatttttgatgcaataaattatacttttactat 7403987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 180 - 275
Target Start/End: Complemental strand, 9076301 - 9076206
Alignment:
Q  180 cgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||  |||| |||||||||    
T  9076301 cgttcctttttaattgtcataatttgacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataaattatacttttactat 9076206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 180 - 275
Target Start/End: Original strand, 38017266 - 38017361
Alignment:
Q  180 cgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||| ||||||||||||||||||| | ||||||||||||| |||||||||||||||||||| |||||||||| |||||||||||| |||||||||    
T  38017266 cgttcttttttaattgtcacattttaacattttacacaaacgaagacaatcaacaattgatattacttttgatgcaataagctatacttttactat 38017361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 12665091 - 12664993
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||||| | | || |||||||||    
T  12665091 ctccgttcctttttaattgtcatattttgacattttacataaaccaagacaatcaacaattgatactacttttgatgcaatatgatgtacttttactat 12664993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 6072685 - 6072587
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||| ||||||||  | ||||||||||||  ||||||||||||||||||||||||||||||| ||||||| |||| |||||||||    
T  6072685 ctccgttcctttttaattatcacatttaaacattttacacaaattaagacaatcaacaattgatactacttttgatgcaataagttatacttttactat 6072587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 18795016 - 18794918
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||| ||||| ||||| |||||||||||| ||||||||||||||||||||  ||||||||||  ||||||||||| |||||||||    
T  18795016 ctccgttcctttttaattttcacactttgacattttacacaaatcaagacaatcaacaattgatcatacttttgatgtaataagctatacttttactat 18794918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 28024245 - 28024343
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||| ||||  ||||||||||||| ||||||| |||| |||||||||    
T  28024245 ctccgttcctttttaattgtcatattttgacattttacaccaaccaagacaatcaataattattactacttttgatgcaataagttatacttttactat 28024343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 28446971 - 28447069
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||| ||||||||||||||| |||||| |||||||||||||||||| |||||| ||||| ||||| ||||||||||||||| |||| |||||||||    
T  28446971 ctccgtttctttttaattgtcactttttgacattttacacaaaccaagataatcaataattgttactatttttgatacaataagttatacttttactat 28447069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 36239691 - 36239593
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||| ||||||||||||||||||||| |||||||||| | |||||||||||| | ||| ||||||||||||| ||||||| ||||||||||||||    
T  36239691 ctccgttcatttttaattgtcacattttgacattttacacatatcaagacaatcaatagttgttactacttttgatgcaataagttatatttttactat 36239593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 40199021 - 40198923
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||| ||||||||||| || ||||||||||||||||| | |||||||||||||||||| ||||||||||||| ||||||| |||| |||||||||    
T  40199021 ctccgttcttttttaattgttactttttgatattttacacagatcaagacaatcaacaattgttactacttttgatgcaataagttatacttttactat 40198923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 166 - 275
Target Start/End: Complemental strand, 18465941 - 18465832
Alignment:
Q  166 aaatatattaactccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctata 265  Q
    ||||||| || |||| ||||||||||||| ||| ||||||||||||| || ||||||| ||||||||||||||||||||||||||||  |||||| ||||    
T  18465941 aaatataatacctccattcctttttaattatcatattttgatatttttcagaaaccaaaacaatcaacaattgatactacttttgatgtaataagttata 18465842  T
Q  266 tttttactat 275  Q
     |||||||||    
T  18465841 cttttactat 18465832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 186 - 275
Target Start/End: Original strand, 24074833 - 24074922
Alignment:
Q  186 tttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||| ||||| ||||||||||||| ||||||| |||| |||||||||    
T  24074833 tttttaattgtcacattttgacattttacacaaaccaaaacaatcaataattgttactacttttgatgcaataagttatacttttactat 24074922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 177 - 271
Target Start/End: Complemental strand, 6008118 - 6008023
Alignment:
Q  177 ctccgttcctttttaattgtcacatttt-gatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatattttta 271  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |  ||||||||||    
T  6008118 ctccgttcctttttaattgtcacttttttgatattttacacaaaccaatacaatcaataattgttactacttttgatacaatgatttatattttta 6008023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 4427391 - 4427490
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattga-tactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||||||||||||||| |||||||||||||||| || |||||||||||  |||| | | ||||||||||||||||||| |||| |||||||||    
T  4427391 ctccgttcctttttaattgtcactttttgatattttacacgaatcaagacaatcagtaatttattgctacttttgatacaataagttatacttttactat 4427490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 178 - 257
Target Start/End: Complemental strand, 37633908 - 37633829
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaat 257  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||||||||| || || || ||||||||||||||||||    
T  37633908 tccgatcctttttaattgtcactttttgatattttacacaaaccaagacaattaataaatgttactacttttgatacaat 37633829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 14793776 - 14793874
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||| | |||||| ||||  ||||| ||||||| ||||||| |||| |||||||||    
T  14793776 ctcccttcctttttaattgtcacattttgacattttacacaaaccaatataatcaataattattactatttttgatgcaataagttatacttttactat 14793874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 16124246 - 16124344
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||| | | ||||  |||| ||||||||||||| ||||||| | ||||||||||||    
T  16124246 ctccgttcctttttaattgtcacattttgacattttacataaaccaatatagtcaatgattgttactacttttgatgcaataagttgtatttttactat 16124344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 18437309 - 18437407
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| || || ||| | |||||||||||||   |||| |||||||||    
T  18437309 ctccgttcctttttaattgtcactttttgatattttacacaaaccaatacaatcaataaatgttaccatttttgatacaatactttatacttttactat 18437407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 22582704 - 22582607
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||  ||||||||||| |||||| ||||| ||||||||||||||||| |||||||||||||| |||||| ||||| || ||||||    
T  22582704 ctccgttcctttttaata-tcacattttgacattttatacaaatcaagacaatcaacaatttatactacttttgatgcaataaactatacttgtactat 22582607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 192 - 274
Target Start/End: Original strand, 31546000 - 31546082
Alignment:
Q  192 attgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttacta 274  Q
    |||||||| |||||| ||||||||||||||||||||||||| ||||| ||||||||||||| ||||||| |||| ||||||||    
T  31546000 attgtcaccttttgacattttacacaaaccaagacaatcaataattgttactacttttgatgcaataagttatacttttacta 31546082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 181 - 257
Target Start/End: Original strand, 12784433 - 12784509
Alignment:
Q  181 gttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaat 257  Q
    |||||||||||||| |||| |||||| ||||||||||||||||||||||||| || || ||||||||||||||||||    
T  12784433 gttcctttttaattctcactttttgacattttacacaaaccaagacaatcaataaatgttactacttttgatacaat 12784509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 177 - 257
Target Start/End: Complemental strand, 13703330 - 13703250
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaat 257  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| || |  ||||| ||||||||||||    
T  13703330 ctccgttcctttttaattgtcactttttgatattttacacaaatcaagacaatcaataaatattactatttttgatacaat 13703250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 177 - 257
Target Start/End: Complemental strand, 37809992 - 37809912
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaat 257  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||||||||| || || || ||||||||||||| ||||    
T  37809992 ctccgatcctttttaattgtcactttttgatattttacacaaaccaagacaattaataaatgttactacttttgatgcaat 37809912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 1297723 - 1297822
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatacta-cttttgatacaataagctatatttttactat 275  Q
    |||| ||||||||||||||| ||||||||| |||||| | |||| |||||||||||||||| ||||||  ||||||| |||||||||||| |||||||||    
T  1297723 ctccattcctttttaattgttacattttgacattttatataaactaagacaatcaacaattaatactattttttgatgcaataagctatacttttactat 1297822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 178 - 257
Target Start/End: Original strand, 5842980 - 5843059
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaat 257  Q
    ||||||||||||||||| |||| |||||| |||||||| |||||||||||||||| || || ||||||||||||||||||    
T  5842980 tccgttcctttttaattatcactttttgacattttacataaaccaagacaatcaataaatgttactacttttgatacaat 5843059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 177 - 260
Target Start/End: Original strand, 38297511 - 38297594
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataag 260  Q
    ||||||||||||||||||||||| |||| | |||||||||||| |||||||||||| ||||| | ||||||||||| |||||||    
T  38297511 ctccgttcctttttaattgtcactttttaacattttacacaaaacaagacaatcaataattgtttctacttttgatgcaataag 38297594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 181 - 259
Target Start/End: Complemental strand, 26906719 - 26906641
Alignment:
Q  181 gttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataa 259  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||| |||| || |  ||||||||||||||||||||    
T  26906719 gttcctttttaattgtcactttttgatattttacacaaaccaaaacattcaataaatcttactacttttgatacaataa 26906641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 178 - 275
Target Start/End: Complemental strand, 6689831 - 6689734
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||||||||||| |  |||| | |||||||||||| ||| ||||| || ||||| ||||| |||||||||||||||||||| |||||||||    
T  6689831 tccgttcctttttaattgttatttttttacattttacacaaatcaaaacaattaataattgttactatttttgatacaataagctatacttttactat 6689734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 177 - 245
Target Start/End: Original strand, 10889174 - 10889242
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactac 245  Q
    ||||||| |||||||||||||||||||| | |||||||| |||||||||||||||||||||||| ||||    
T  10889174 ctccgtttctttttaattgtcacattttaacattttacataaaccaagacaatcaacaattgatcctac 10889242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 181 - 257
Target Start/End: Original strand, 12722949 - 12723025
Alignment:
Q  181 gttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaat 257  Q
    |||||||||||||| |||| |||||| ||||||||||||||||||||||||| || |  ||||||||||||||||||    
T  12722949 gttcctttttaattctcactttttgacattttacacaaaccaagacaatcaataaatattactacttttgatacaat 12723025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 177 - 257
Target Start/End: Complemental strand, 31803557 - 31803477
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaat 257  Q
    |||||||| |||||||||||||| |||||| |||||||||||| ||||||||| || || || ||||||||||||||||||    
T  31803557 ctccgttcttttttaattgtcactttttgacattttacacaaatcaagacaattaataaatgttactacttttgatacaat 31803477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 176 - 275
Target Start/End: Complemental strand, 5119412 - 5119313
Alignment:
Q  176 actccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||||  |||| |||||||| |||||  || |||||||| ||||| | ||||||||||| ||||||| |||| |||||||||    
T  5119412 actccgttcctttttaattgtcattttttaatattttatacaaattaatacaatcaataattgtttctacttttgatgcaataagttatacttttactat 5119313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 180 - 275
Target Start/End: Original strand, 8229793 - 8229887
Alignment:
Q  180 cgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||| |||||| || |||||||||  ||||||||||| ||||| || |||||||||| ||||||| |||| |||||||||    
T  8229793 cgttcctttttaattgtcac-ttttgacatcttacacaaattaagacaatcaataattgttaatacttttgatgcaataagttatacttttactat 8229887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 257
Target Start/End: Original strand, 39893796 - 39893875
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaat 257  Q
    |||||||||||||||||||||| |||| | |||||||||||||||| | |||||| || || ||||||||||||||||||    
T  39893796 tccgttcctttttaattgtcactttttaacattttacacaaaccaaaataatcaataagtgttactacttttgatacaat 39893875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 182 - 275
Target Start/End: Complemental strand, 4017642 - 4017549
Alignment:
Q  182 ttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||| |||||| |||||||||||| ||||| |||||| ||||| |  |||||||||| ||||||| |||  |||||||||    
T  4017642 ttcctttttaattgtcactttttgacattttacacaaatcaagataatcaataattgtttttacttttgatgcaataagttattcttttactat 4017549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 178 - 259
Target Start/End: Original strand, 25027562 - 25027643
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataa 259  Q
    |||||| ||||||||||||||| || ||| |||||||| |||| ||||||||||| || || ||||||||||||||||||||    
T  25027562 tccgtttctttttaattgtcactttgtgacattttacataaactaagacaatcaataaatgttactacttttgatacaataa 25027643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 171 - 275
Target Start/End: Complemental strand, 7408570 - 7408466
Alignment:
Q  171 tattaactccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatattttt 270  Q
    ||||| || |||||||||||||||||||  |||||| |||||||||||||||| |||||||| ||    || |||||||||||||||||  |||| ||||    
T  7408570 tattaccttcgttcctttttaattgtcatcttttgacattttacacaaaccaaaacaatcaataaacattaatacttttgatacaataatttatactttt 7408471  T
Q  271 actat 275  Q
    |||||    
T  7408470 actat 7408466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 177 - 229
Target Start/End: Complemental strand, 31803170 - 31803118
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaat 229  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  31803170 ctccgttcctttttaattgtcaccttttgatattttacacataccaagacaat 31803118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 257
Target Start/End: Original strand, 37306693 - 37306765
Alignment:
Q  185 ctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaat 257  Q
    ||||||||||||||| |||| | |||||||||||||||||||||| || || || ||||||||||||||||||    
T  37306693 ctttttaattgtcactttttaacattttacacaaaccaagacaattaataaatgttactacttttgatacaat 37306765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 168 - 275
Target Start/End: Original strand, 9127328 - 9127435
Alignment:
Q  168 atatattaactccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatt 267  Q
    ||||| || |||||||||||||||||||||||||||||| |||||||| ||||||| | | ||||  |||| ||  ||||||||| ||||||| | || |    
T  9127328 atatactacctccgttcctttttaattgtcacattttgacattttacataaaccaaaatagtcaatgattgttatcacttttgatgcaataagttgtact 9127427  T
Q  268 tttactat 275  Q
    ||||||||    
T  9127428 tttactat 9127435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 2133894 - 2133990
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||| ||||||||||| |||  |||||| |||||||| |||||||||||||||| ||||| ||||| ||||||| ||||||| |||| |||||||||    
T  2133894 ctccgtgcctttttaattatcat-ttttgacattttacataaaccaagacaatcaataattgttacta-ttttgatgcaataagttatacttttactat 2133990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 256
Target Start/End: Complemental strand, 24229180 - 24229102
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaa 256  Q
    ||||||| ||||||||||||   || |||||||||||||||||||||||| |||| || || |||||||||||||||||    
T  24229180 tccgttcatttttaattgtctttttctgatattttacacaaaccaagacattcaataaatgttactacttttgatacaa 24229102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 186 - 275
Target Start/End: Original strand, 30368130 - 30368219
Alignment:
Q  186 tttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||| ||||||| | ||||||||||||| ||||||||||| || || ||||| |||||||| |||||  | ||||||||||||    
T  30368130 tttttaattgttacattttaacattttacacaaactaagacaatcaataaatgttactatttttgatataataatttttatttttactat 30368219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 188 - 257
Target Start/End: Complemental strand, 32389208 - 32389139
Alignment:
Q  188 tttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaat 257  Q
    |||||||||||| |||| | |||||||| |||||||||||||||| || || ||||||||||||||||||    
T  32389208 tttaattgtcactttttaacattttacataaaccaagacaatcaataagtgttactacttttgatacaat 32389139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 177 - 253
Target Start/End: Complemental strand, 18000565 - 18000490
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgata 253  Q
    |||||||||||||||||||| || |||||| |||||||||||||||| ||||| || || || ||||||||||||||    
T  18000565 ctccgttcctttttaattgttaccttttgacattttacacaaaccaaaacaattaataa-tgttactacttttgata 18000490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 271
Target Start/End: Complemental strand, 13461240 - 13461149
Alignment:
Q  180 cgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatattttta 271  Q
    |||||||||||||||||||| |||||| |||||||||||||||| ||| |||| || || ||||  || | |||||||||  ||||||||||    
T  13461240 cgttcctttttaattgtcactttttgacattttacacaaaccaatacactcaataaatgttactttttgttatacaataatttatattttta 13461149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 259
Target Start/End: Original strand, 38308112 - 38308194
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataa 259  Q
    ||||||||||||||||  ||||| |||||| |||||||||||||||||||| |||| || || ||||  |||| |||||||||    
T  38308112 ctccgttcctttttaacggtcactttttgacattttacacaaaccaagacactcaataaatgttacttttttttatacaataa 38308194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 275
Target Start/End: Complemental strand, 3686914 - 3686825
Alignment:
Q  186 tttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||| |||||||||||  ||||| | ||||||| |||||||| || || | ||||||||||||||||||  | ||||||||||||    
T  3686914 tttttaattatcacattttgacgttttatataaaccaaaacaatcaataaatgttgctacttttgatacaataatttctatttttactat 3686825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 275
Target Start/End: Complemental strand, 6331049 - 6330956
Alignment:
Q  182 ttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||||| || | |||||| |||||||| ||||  |||||||||| || |  |||||||||||||| |||||  ||||||||||||||    
T  6331049 ttcctttttaattatctctttttgacattttacataaacttagacaatcaataaatattactacttttgataaaataatttatatttttactat 6330956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 257
Target Start/End: Original strand, 12637940 - 12638013
Alignment:
Q  184 cctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaat 257  Q
    |||||||||||||||| |||| | |||||||| ||| |||||||||||| || |  ||||||||||||||||||    
T  12637940 cctttttaattgtcactttttaacattttacataaatcaagacaatcaataaatattactacttttgatacaat 12638013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 178 - 245
Target Start/End: Original strand, 7734771 - 7734838
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactac 245  Q
    |||||||||||||||||||||  |||| | |||||||| ||| |||||||||||| || |||||||||    
T  7734771 tccgttcctttttaattgtcattttttcaaattttacataaatcaagacaatcaataaatgatactac 7734838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 260
Target Start/End: Original strand, 7834059 - 7834134
Alignment:
Q  185 ctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataag 260  Q
    ||||||||||||||| ||||||||||||||||||| ||| | |||||| ||||  |  |||||||||| |||||||    
T  7834059 ctttttaattgtcaccttttgatattttacacaaatcaaaataatcaataattatttttacttttgatgcaataag 7834134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 275
Target Start/End: Original strand, 19831560 - 19831626
Alignment:
Q  209 ttttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||||| || || || || ||||||||||||||  ||||| ||||||||    
T  19831560 ttttacacaaaccaagacaatcaataaatgttaatatttttgatacaataatttatatgtttactat 19831626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 28463371 - 28463469
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||| |||||||| | || | ||||||||||||||||||||||||||| |||| || || ||||  || | |||||||||  |||| |||||||||    
T  28463371 ctccgtttctttttaactatcgctttttgatattttacacaaaccaagacactcaataaatgttactttttcttatacaataatttatacttttactat 28463469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 275
Target Start/End: Original strand, 38502798 - 38502888
Alignment:
Q  185 ctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||| ||||||| | |||||||||||||||| | | ||||  |||| |||||||||||||  |||||| | || |||||||||    
T  38502798 ctttttaattgttacattttaacattttacacaaaccaaaatagtcaatgattgttactacttttgatgtaataagttgtacttttactat 38502888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 259
Target Start/End: Original strand, 9958858 - 9958951
Alignment:
Q  166 aaatatattaactccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataa 259  Q
    ||||||| || || ||||| |||||||||||||  |||||| | |||||||||| ||| ||| |||| || ||  |||||||||||||||||||    
T  9958858 aaatatactaccttcgttcatttttaattgtcattttttgacaatttacacaaatcaatacattcaataaatgtcactacttttgatacaataa 9958951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 232
Target Start/End: Original strand, 4688810 - 4688862
Alignment:
Q  180 cgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaa 232  Q
    |||| |||||||||||||||||||||| ||||| || ||| ||||||||||||    
T  4688810 cgtttctttttaattgtcacattttgacattttccataaatcaagacaatcaa 4688862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 21157866 - 21157815
Alignment:
Q  177 ctccgttcctttttaattgtcacattttga-tattttacacaaaccaagacaa 228  Q
    ||||||||||||||||||||||| |||||| | ||||||||||||||||||||    
T  21157866 ctccgttcctttttaattgtcac-ttttgagttttttacacaaaccaagacaa 21157815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 259
Target Start/End: Complemental strand, 3244026 - 3243947
Alignment:
Q  180 cgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataa 259  Q
    ||||| |||||||||||||  |||||| |||||||| ||| ||||||||| || || || ||||| |||| |||||||||    
T  3244026 cgttcatttttaattgtcattttttgacattttacataaatcaagacaattaataaatgttactattttttatacaataa 3243947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 208 - 275
Target Start/End: Complemental strand, 4694966 - 4694899
Alignment:
Q  208 attttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||| |||||||||||| |||||| ||||| || ||||||||||  |||||| |||| |||||||||    
T  4694966 atttttcacaaaccaagataatcaataattgctaatacttttgatgtaataagttatacttttactat 4694899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 228
Target Start/End: Complemental strand, 40927381 - 40927334
Alignment:
Q  181 gttcctttttaattgtcacattttgatattttacacaaaccaagacaa 228  Q
    ||||||||||||||||||| ||||||| |||||||||||  |||||||    
T  40927381 gttcctttttaattgtcacgttttgattttttacacaaattaagacaa 40927334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 1795103 - 1795201
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||||||||  || || |||||| |||||||||||| ||||||| |||| || || ||||  || | |||||||||  |||| |||||||||    
T  1795103 ctccgttcctttttaacggttactttttgacattttacacaaatcaagacactcaataaatgttactttttcttatacaataatttatacttttactat 1795201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 227
Target Start/End: Complemental strand, 4440318 - 4440272
Alignment:
Q  181 gttcctttttaattgtcacattttgatattttacacaaaccaagaca 227  Q
    |||||||||||||||||| ||||| |  |||||||||||||||||||    
T  4440318 gttcctttttaattgtcatattttaactttttacacaaaccaagaca 4440272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 4609258 - 4609206
Alignment:
Q  177 ctccgttcctttttaattgtcacattttga--tattttacacaaaccaagacaa 228  Q
    ||||||||||||||||||||||| ||||||  | ||||||||||||||||||||    
T  4609258 ctccgttcctttttaattgtcac-ttttgagtttttttacacaaaccaagacaa 4609206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 257
Target Start/End: Complemental strand, 7466409 - 7466335
Alignment:
Q  183 tcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaat 257  Q
    |||||||||||||| |  ||||||||||||||| ||| ||||||||| || || || || ||||||| |||||||    
T  7466409 tcctttttaattgttattttttgatattttacataaatcaagacaattaataaatgttattacttttaatacaat 7466335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 227
Target Start/End: Original strand, 13957150 - 13957196
Alignment:
Q  181 gttcctttttaattgtcacattttgatattttacacaaaccaagaca 227  Q
    |||| |||||||||||||||||||||  ||||||| |||||||||||    
T  13957150 gttcttttttaattgtcacattttgactttttacataaaccaagaca 13957196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #86
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 256
Target Start/End: Original strand, 18676400 - 18676480
Alignment:
Q  177 ctccgttcctttttaattgtcacattttga--tattttacacaaaccaagacaatcaacaattgatactacttttgatacaa 256  Q
    ||||||||||||||||||||||| ||||||  | ||||||||||| ||||||||  || | ||  |||||||||||||||||    
T  18676400 ctccgttcctttttaattgtcac-ttttgaatttttttacacaaatcaagacaacaaatactttttactacttttgatacaa 18676480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #87
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 223
Target Start/End: Complemental strand, 36481308 - 36481262
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaa 223  Q
    |||||||||||||||||| ||| |||||||  |||||||||||||||    
T  36481308 ctccgttcctttttaattatcatattttgactttttacacaaaccaa 36481262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #88
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 275
Target Start/End: Original strand, 38297606 - 38297700
Alignment:
Q  181 gttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||||  ||||| |||||| ||||||||||||| |||||| |||| || || ||||  || | |||||||||  |||| |||||||||    
T  38297606 gttcctttttaaccgtcactttttgacattttacacaaactaagacactcaataaatgttactttttcttatacaataatttatacttttactat 38297700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #89
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 227
Target Start/End: Complemental strand, 25786139 - 25786090
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagaca 227  Q
    |||||||||||||||||||| | ||| ||| ||||| |||||||||||||    
T  25786139 tccgttcctttttaattgtcgcttttagattttttatacaaaccaagaca 25786090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #90
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 274
Target Start/End: Original strand, 31985044 - 31985133
Alignment:
Q  185 ctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttacta 274  Q
    |||| ||||| |||| |||||| |||||||| ||| |||||||||||| || ||  | ||||||| ||| |||||  |||||||||||||    
T  31985044 ctttctaattatcactttttgacattttacataaatcaagacaatcaataaatgtcattacttttaatataataatttatatttttacta 31985133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #91
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 256
Target Start/End: Original strand, 11413516 - 11413595
Alignment:
Q  177 ctccgttcctttttaattgtcacattttga-tattttacacaaaccaagacaatcaacaattgatactacttttgatacaa 256  Q
    |||||||||||||||||| |||  |||||| | ||||||||||||||||||||  || | ||  |||||||||||||||||    
T  11413516 ctccgttcctttttaattatcat-ttttgagttttttacacaaaccaagacaacaaatactttttactacttttgatacaa 11413595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #92
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 18392957 - 18393008
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgata-ttttacacaaaccaagacaa 228  Q
    ||||||||||||||||||||||| |||||| | ||||||| ||||||||||||    
T  18392957 ctccgttcctttttaattgtcac-ttttgagatttttacataaaccaagacaa 18393008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #93
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 21150725 - 21150674
Alignment:
Q  177 ctccgttcctttttaattgtcacattttga-tattttacacaaaccaagacaa 228  Q
    |||||||||||||||| |||||| |||||| | ||||||||||||||||||||    
T  21150725 ctccgttcctttttaactgtcac-ttttgagttttttacacaaaccaagacaa 21150674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 91; Significance: 4e-44; HSPs: 108)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 8735643 - 8735545
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  8735643 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagctatacttttactat 8735545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 38617299 - 38617395
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  38617299 ctccgttcctttttaattgtcacattttgatattttacacaaacca--acaatcaacaattgatactacttttgatgcaataagctatatttttactat 38617395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 44069285 - 44069187
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  44069285 ctccgtttctttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagctatacttttactat 44069187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 44217960 - 44217862
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |||||||||    
T  44217960 ctccgttcctttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagatatacttttactat 44217862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 19527210 - 19527308
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  19527210 ctcctttcctttttaattgtcacattttgacgttttacacaaaccaagataatcaacaattgatactacttttgatacaataagctataattttactat 19527308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 177 - 271
Target Start/End: Original strand, 39683704 - 39683798
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatattttta 271  Q
    |||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  39683704 ctccgttcctttttaattatcacattttcacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagctatattttta 39683798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 44013903 - 44014001
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||| |||||||||    
T  44013903 ctccgttcctttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgaaactatttttgatgcaataagctatacttttactat 44014001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 172 - 275
Target Start/End: Complemental strand, 35231949 - 35231846
Alignment:
Q  172 attaactccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatattttta 271  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||| |||||| ||||| |||||    
T  35231949 attacctccgttcctttttaattgtcacattttgacattttacacaaattaagacaatcaacaattgatactacttttgatgcaataaactatactttta 35231850  T
Q  272 ctat 275  Q
    ||||    
T  35231849 ctat 35231846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 5374340 - 5374438
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||| |||||||||||||| ||||||| |||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  5374340 ctccgtttctttttaattgtcatattttgacattttatacaaatcaagacaatcaacaattgatactacttttgatgcaataagctatatttttactat 5374438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 181 - 275
Target Start/End: Original strand, 13629187 - 13629281
Alignment:
Q  181 gttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| || |||||||||||| |||||||||    
T  13629187 gttcctttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactatttttcatgcaataagctatacttttactat 13629281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 16464772 - 16464870
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||| |||||||||    
T  16464772 ctccgttcctttttagttgtcacattttgacattttacacaaacctagacaatcaacaattgatactatttttgatgcaataagctatacttttactat 16464870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 39671579 - 39671481
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||||    
T  39671579 ctccgttcctatttaattgtcacattatgacattttacacaaaccaagacaatcaacaattgatattacttttgatgcaataagctatacttttactat 39671481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 53599776 - 53599874
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||| |||||||||    
T  53599776 ctccgttcctttttaattgtcacattttaacattttacacaaaccaagacaatcaacaattgatattacttttgatgcaataagttatacttttactat 53599874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 56576094 - 56576192
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||| |||||||||    
T  56576094 ctccgttcctttttaattgtcacattttgacgttttacacaaaccaagataatcaacaattgatactacctttgatgcaataagctatacttttactat 56576192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 174 - 271
Target Start/End: Original strand, 26620338 - 26620435
Alignment:
Q  174 taactccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatattttta 271  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||||| |||| ||||||||||||||||||||||| |||||||||||| |||||    
T  26620338 taactccgttcctttttaattgtcacattttgacattttgcacaaaccaaaacaaacaacaattgatactacttttgatgcaataagctatactttta 26620435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 178 - 275
Target Start/End: Original strand, 35232289 - 35232386
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||||| |||| |||||||||    
T  35232289 tccgttcttttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactgcttttgatgcaataagatatacttttactat 35232386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 178 - 275
Target Start/End: Complemental strand, 48782452 - 48782355
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||| |||||||||    
T  48782452 tccgttcatttttaattgtcacattttgacattttacacaaaccaagataatcaacaattgatactacttttgatgcaataagcaatacttttactat 48782355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 186 - 275
Target Start/End: Complemental strand, 50623658 - 50623569
Alignment:
Q  186 tttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  50623658 tttttaattgtcacattttaacattttacacaaaccaagacaatcaaaaattgatactacttttgatacaataagctatacttttactat 50623569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 180 - 275
Target Start/End: Complemental strand, 46872172 - 46872077
Alignment:
Q  180 cgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||  |||||||||    
T  46872172 cgttccttttaaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagttattcttttactat 46872077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 21044738 - 21044835
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||||||    
T  21044738 ctccgttccttttta-ttatcacattttgacattttacacaaaccaagacaatcaacaattgatactatttttgatgcaataagctatacttttactat 21044835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 22828391 - 22828489
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||| ||||||||||||| ||||||| |||| |||||||||    
T  22828391 ctccgttcctttttaattgtcacattttgacattttacacaaaccaagacaaccaataattgctactacttttgatgcaataagttatacttttactat 22828489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 185 - 275
Target Start/End: Complemental strand, 36408969 - 36408879
Alignment:
Q  185 ctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||| |||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||| |||||||||    
T  36408969 ctttttaattgtcacattttgacattttacacaaaccaagacaataaacatttgatactacttttgatgcaataagctatacttttactat 36408879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 185 - 275
Target Start/End: Complemental strand, 36423135 - 36423045
Alignment:
Q  185 ctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||| |||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||| |||||||||    
T  36423135 ctttttaattgtcacattttgacattttacacaaaccaagacaataaacatttgatactacttttgatgcaataagctatacttttactat 36423045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 191 - 275
Target Start/End: Complemental strand, 16664481 - 16664397
Alignment:
Q  191 aattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  16664481 aattgtcacattttgacattttacacaaatcaagacaatcaacaattgatactacttttgatgcaataagctatacttttactat 16664397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 177 - 248
Target Start/End: Complemental strand, 9834534 - 9834463
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttt 248  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  9834534 ctccgttcctttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactacttt 9834463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 42513015 - 42513114
Alignment:
Q  177 ctccgttcctttttaattgtcacatttt-gatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||| ||||||||||||||||||| || |||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||| |||||||||    
T  42513015 ctccgttcatttttaattgtcacatttttgaaattttacacaaatcaagacaatcaacaattaatactacttttgatgcaataagctatacttttactat 42513114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 22678299 - 22678397
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||| ||||||||||||||||||||| |||||| | ||||||||| |||||||||||||||||||| ||||| |||||||||||| |||||||||    
T  22678299 ctccgttcatttttaattgtcacattttgacattttatataaaccaagataatcaacaattgatactactattgatgcaataagctatacttttactat 22678397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 33755021 - 33755119
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||||||||| | |||||||| |||| |||||||||||||||||||||| ||||| || |||||||||||| |||||||||    
T  33755021 ctccgttcctttttaattgtcacattttaacattttacataaactaagacaatcaacaattgatactccttttaatgcaataagctatacttttactat 33755119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 186 - 275
Target Start/End: Original strand, 3436066 - 3436155
Alignment:
Q  186 tttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||| ||||| |||||||||    
T  3436066 tttttaattatcacattttgacattttacacaaaccaagacaatcaacaattaatactacttttgatgcaataaactatacttttactat 3436155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 12252346 - 12252248
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||| ||||| ||||||| |||||||| ||| ||||||||||||||||||||| |||||||||| ||||||| |||| |||||||||    
T  12252346 ctccgttcctttttaactgtcatattttgacattttacataaatcaagacaatcaacaattgataatacttttgatgcaataagttatacttttactat 12252248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 52061812 - 52061714
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||| ||||||| |||||||||||| ||||||||||||  |||| ||||||||||||| ||||||| |||| |||||||||    
T  52061812 ctccgttcctttttaattgtcatattttgacattttacacaaatcaagacaatcaatcattgttactacttttgatgcaataagttatacttttactat 52061714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 54231793 - 54231695
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||||||||||||||  |||||| |||||||||||| |||||||||||| ||||| ||||||||||||| ||||||| |||| |||||||||    
T  54231793 ctccgttcctttttaattgtcattttttgacattttacacaaatcaagacaatcaataattgttactacttttgatgcaataagttatacttttactat 54231695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 55703174 - 55703076
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||| ||||||| |||||||| | |||||||||||||| ||||| || |||||||||| ||||||| ||||||||||||||    
T  55703174 ctccgttcctttttaattgtcatattttgacattttacatataccaagacaatcaataattgttattacttttgatgcaataagttatatttttactat 55703076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 178 - 275
Target Start/End: Complemental strand, 23237883 - 23237786
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||||||||||| ||||||| | ||||||||||||| |  |||||||||||||||||||||||||||| | |||||||||| |||||||||    
T  23237883 tccgttcctttttaattgttacattttaacattttacacaaactagaacaatcaacaattgatactacttttgatgcgataagctatacttttactat 23237786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 186 - 271
Target Start/End: Complemental strand, 29295599 - 29295514
Alignment:
Q  186 tttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatattttta 271  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||| |||| |||||    
T  29295599 tttttaattatcacattttgatattttacacaaaccaagacaatcaataattgatactactttcgatgcaataagttatactttta 29295514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 181 - 277
Target Start/End: Complemental strand, 6195274 - 6195178
Alignment:
Q  181 gttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactatga 277  Q
    ||||||||||||||||||| |||||| ||||| ||||||||||||||||| | ||||| ||||||||||||| ||||||| |||| |||||||||||    
T  6195274 gttcctttttaattgtcactttttgacatttttcacaaaccaagacaatccataattgctactacttttgatgcaataagttatacttttactatga 6195178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 178 - 273
Target Start/End: Original strand, 26906380 - 26906475
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttact 273  Q
    ||||||| ||||||||||||| ||||||||||||||||||||| || ||||||||||||||||| ||||||| || ||||||| |||| |||||||    
T  26906380 tccgttcatttttaattgtcatattttgatattttacacaaactaaaacaatcaacaattgatattactttttatgcaataagttatacttttact 26906475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 176 - 271
Target Start/End: Complemental strand, 34464532 - 34464437
Alignment:
Q  176 actccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatattttta 271  Q
    ||||||||||||||||||||| |||||||||||||||| |||||  || |||||||| |||||||| |||||||||| |||||||||||| |||||    
T  34464532 actccgttcctttttaattgttacattttgatattttatacaaattaaaacaatcaataattgatattacttttgatgcaataagctatactttta 34464437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 19093143 - 19093241
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||| | |||| ||||| ||||||||||||| ||||||| | || |||||||||    
T  19093143 ctccgttcctttttaattgtcacattttgacattttacataaaccaagatagtcaataattgttactacttttgatgcaataagttgtacttttactat 19093241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 185 - 273
Target Start/End: Original strand, 31984150 - 31984238
Alignment:
Q  185 ctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttact 273  Q
    ||||||||||||||| |||||| |||||||||||||||| |||||||| ||||| ||||||||||||| ||||||| |||| |||||||    
T  31984150 ctttttaattgtcactttttgacattttacacaaaccaacacaatcaataattgttactacttttgatgcaataagttatacttttact 31984238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 186 - 273
Target Start/End: Complemental strand, 42099953 - 42099866
Alignment:
Q  186 tttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttact 273  Q
    ||||||||||||||||||||| |||  |||||||||||||||||||| ||||| ||||||||||||| ||||||| |||| |||||||    
T  42099953 tttttaattgtcacattttgacattaaacacaaaccaagacaatcaataattgttactacttttgatgcaataagttatacttttact 42099866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 177 - 249
Target Start/End: Original strand, 52677156 - 52677228
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactactttt 249  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||| |||||||| ||||||| ||||||||    
T  52677156 ctccattcctttttaattgtcacattttgacattttacacaaaccaaaacaatcaataattgatgctactttt 52677228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 354220 - 354122
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||| | ||||  |||| ||||| ||||||| ||||||| | || |||||||||    
T  354220 ctccgttcctttttaattgtcacattttgacattttacataaaccaagatagtcaatgattgttactatttttgatgcaataagttgtacttttactat 354122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 181 - 275
Target Start/End: Original strand, 38542270 - 38542364
Alignment:
Q  181 gttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||||||||||  |||||| |||||||| ||||||||||||| || ||||| ||||||||||||| ||||||| || | |||||||||    
T  38542270 gttcctttttaattgtcattttttgacattttacataaaccaagacaattaataattgttactacttttgatgcaataagttagacttttactat 38542364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 178 - 255
Target Start/End: Complemental strand, 42629570 - 42629493
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgataca 255  Q
    ||||||| |||||||||||||  |||||||||||||||||||||||||||||||| || || ||||||||||| ||||    
T  42629570 tccgttcgtttttaattgtcattttttgatattttacacaaaccaagacaatcaataaatgttactacttttggtaca 42629493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 177 - 257
Target Start/End: Complemental strand, 30939409 - 30939329
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaat 257  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||  |||| || || || |||||||||||||||    
T  30939409 ctccgttcctttttaattgtcatattttgattttttacacaaaccaagacggtcaataaatggtagtacttttgatacaat 30939329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 187 - 275
Target Start/End: Complemental strand, 37502266 - 37502178
Alignment:
Q  187 ttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||| |||||||| |||||| |||||| |||||||||||||||||| || || ||||||||||||||||||||  |||| |||||||||    
T  37502266 ttttgattgtcactttttgacattttatacaaaccaagacaatcaataaatgttactacttttgatacaataatttatacttttactat 37502178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 177 - 257
Target Start/End: Complemental strand, 49089160 - 49089080
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaat 257  Q
    ||||||||||||||||||||||| |||||||||||||| | ||||||||||||||| || |  |||||| |||||||||||    
T  49089160 ctccgttcctttttaattgtcactttttgatattttactcgaaccaagacaatcaataaatattactacgtttgatacaat 49089080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 277
Target Start/End: Complemental strand, 32239650 - 32239550
Alignment:
Q  181 gttcctttttaattgtcacattttgatattttacacaaaccaa----gacaatcaacaattgatactacttttgatacaataagctatatttttactatg 276  Q
    |||| ||||||||||| | | |||||||||||| ||||| |||    |||||| |||||||||||||||||||||| |||||||||||| ||||||||||    
T  32239650 gttcatttttaattgttatactttgatattttatacaaatcaatcaagacaattaacaattgatactacttttgatgcaataagctatacttttactatg 32239551  T
Q  277 a 277  Q
    |    
T  32239550 a 32239550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 31861976 - 31862074
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||| |  |||||| ||||||||||||| |||| |||||| ||||| ||||||||||||| ||| ||  |||| |||||||||    
T  31861976 ctccgttcctttttaattgttattttttgaaattttacacaaactaagataatcaataattgttactacttttgatgcaaaaaattatacttttactat 31862074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 189 - 275
Target Start/End: Original strand, 53125240 - 53125326
Alignment:
Q  189 ttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||| ||||||| |||||||||||||||||| |||||| ||||| ||||| |||| || ||||||| |||| |||||||||    
T  53125240 ttaattgtcatattttgacattttacacaaaccaagataatcaataattgttactattttttatgcaataagttatacttttactat 53125326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 178 - 275
Target Start/End: Complemental strand, 33084726 - 33084634
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||| |||||| |||||||| ||||     ||||||| ||||| ||||||||||||| ||||||| |||| |||||||||    
T  33084726 tccgttcctttttaattgtcactttttgacattttacagaaac-----caatcaataattgttactacttttgatgcaataagttatacttttactat 33084634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 180 - 257
Target Start/End: Complemental strand, 43888232 - 43888156
Alignment:
Q  180 cgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaat 257  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||| |||||| || || |||||| |||||||||||    
T  43888232 cgttcctttttaattgtcactttttgatattttacataaaccaagagaatcaataaatgttactac-tttgatacaat 43888156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 178 - 259
Target Start/End: Original strand, 47596604 - 47596685
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataa 259  Q
    |||||||||||||||||||||  |||||| |||||||||||||||| | | |||| || || ||||||||||||||||||||    
T  47596604 tccgttcctttttaattgtcattttttgacattttacacaaaccaataaagtcaataaatgttactacttttgatacaataa 47596685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 177 - 257
Target Start/End: Original strand, 9220031 - 9220111
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaat 257  Q
    ||||||| ||||||||||||||| |||||| |||||||||||| ||||||||| || || |  ||||||||||||||||||    
T  9220031 ctccgtttctttttaattgtcactttttgaaattttacacaaaacaagacaattaataaatcttactacttttgatacaat 9220111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 33751333 - 33751388
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaa 232  Q
    |||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||    
T  33751333 ctccgttcctttttaattgttacattttgacattttacacaaactaagacaatcaa 33751388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 260
Target Start/End: Original strand, 47884977 - 47885060
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataag 260  Q
    |||||||||  ||||||||||||||||||| ||||||||| |||||| |||||||| ||||  || |||||||||| |||||||    
T  47884977 ctccgttccaatttaattgtcacattttgacattttacacgaaccaaaacaatcaataattattattacttttgatgcaataag 47885060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 23719774 - 23719872
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||| |  |||||| |||||||| |||| |||||| |||| || |  ||||||||||||||||||||  |||| |||||||||    
T  23719774 ctccgttcctttttaattgttattttttgacattttacataaactaagacattcaataaatattactacttttgatacaataatatatacttttactat 23719872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 171 - 257
Target Start/End: Complemental strand, 33809347 - 33809261
Alignment:
Q  171 tattaactccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaat 257  Q
    ||||| ||| ||||||||||||||||||| |||| | |||||||||||| ||| |||||||| || || ||||||||||||| ||||    
T  33809347 tattacctctgttcctttttaattgtcactttttaacattttacacaaatcaaaacaatcaataaatgttactacttttgatgcaat 33809261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 177 - 227
Target Start/End: Original strand, 38009756 - 38009806
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagaca 227  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  38009756 ctccgttcctttttaattgtcacattttgactttttacacaaaccaagaca 38009806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 177 - 259
Target Start/End: Complemental strand, 45725790 - 45725708
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataa 259  Q
    ||||||||||||||||||||||  |||||| ||||||||||||| || | | |||| || || ||||||||||||||||||||    
T  45725790 ctccgttcctttttaattgtcattttttgacattttacacaaacaaataaagtcaataaatgttactacttttgatacaataa 45725708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 227
Target Start/End: Complemental strand, 48087948 - 48087902
Alignment:
Q  181 gttcctttttaattgtcacattttgatattttacacaaaccaagaca 227  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||    
T  48087948 gttcctttttaattgtcacattttgattttttacacaaaccaagaca 48087902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 180 - 257
Target Start/End: Complemental strand, 42133288 - 42133211
Alignment:
Q  180 cgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaat 257  Q
    |||| ||||||||||||||| |||  |||||||||||||||||| |||||||| || || ||||| ||||||||||||    
T  42133288 cgtttctttttaattgtcacttttcaatattttacacaaaccaaaacaatcaataaatgttactatttttgatacaat 42133211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 178 - 231
Target Start/End: Complemental strand, 47428772 - 47428719
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatca 231  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||||| |||||    
T  47428772 tccgttcctttttaattgtcacattttgatattttacataaatcaagataatca 47428719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 177 - 273
Target Start/End: Original strand, 55147050 - 55147147
Alignment:
Q  177 ctccgttcctttttaattgtcacattttg-atattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttact 273  Q
    |||||||| |||||||||||||  ||||  | |||||||| ||||||||||||| || ||||| || |||||||||| |||||||||||| |||||||    
T  55147050 ctccgttcttttttaattgtcattttttttacattttacataaaccaagacaattaataattgttattacttttgatgcaataagctatacttttact 55147147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 180 - 256
Target Start/End: Complemental strand, 30151923 - 30151847
Alignment:
Q  180 cgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaa 256  Q
    ||||| |||||||||||| | |||| |||||||||||||||||||||| |||| || || |||| ||||||||||||    
T  30151923 cgttcatttttaattgtctctttttaatattttacacaaaccaagacattcaataaatgttactgcttttgatacaa 30151847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 163 - 271
Target Start/End: Complemental strand, 44549910 - 44549803
Alignment:
Q  163 ttcaaatatattaactccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagct 262  Q
    |||||||||| || ||||||||||||| |||| ||||  |||||||||||| | ||| ||| || ||||| ||||  ||||||||||||||||||||| |    
T  44549910 ttcaaatatactacctccgttcctttt-aattatcactgtttgatattttatataaatcaaaacgatcaataattattactacttttgatacaataagtt 44549812  T
Q  263 atattttta 271  Q
    ||| |||||    
T  44549811 atactttta 44549803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 168 - 260
Target Start/End: Complemental strand, 47251676 - 47251584
Alignment:
Q  168 atatattaactccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataag 260  Q
    ||||| || ||||||| ||||||||||||||||||||   |||||||| ||||||| | ||||||  |||| ||||||||||||| |||||||    
T  47251676 atatactacctccgtttctttttaattgtcacattttatcattttacataaaccaaaataatcaatgattgttactacttttgatgcaataag 47251584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 170 - 257
Target Start/End: Complemental strand, 3036644 - 3036557
Alignment:
Q  170 atattaactccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaat 257  Q
    |||||| |||||||||||||||||||||| ||||| | |||||||| ||| ||  |||||||| || || || |||||||||||||||    
T  3036644 atattacctccgttcctttttaattgtcatatttttacattttacataaatcataacaatcaataaatgttattacttttgatacaat 3036557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 271
Target Start/End: Original strand, 8741617 - 8741708
Alignment:
Q  185 ctttttaattgtcacattttga-----tattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatattttta 271  Q
    ||||||||||| ||||||||||     ||||||| ||||||||  ||||| ||||||||||| |||||||||| |||||||||||| |||||    
T  8741617 ctttttaattgacacattttgacattttattttatacaaaccattacaattaacaattgatattacttttgatgcaataagctatactttta 8741708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 275
Target Start/End: Original strand, 18135048 - 18135139
Alignment:
Q  185 ctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatacta-cttttgatacaataagctatatttttactat 275  Q
    |||||||||||||| ||||||| |||||||||||||||| |||||||| || |  |||||  ||||||||||||||  | ||||||||||||    
T  18135048 ctttttaattgtcatattttgacattttacacaaaccaaaacaatcaataaatattactattttttgatacaataatttttatttttactat 18135139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 260
Target Start/End: Original strand, 29832354 - 29832433
Alignment:
Q  181 gttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataag 260  Q
    ||||||||||||||||| | |||||| |||||||  | |||||||||||||| ||||| ||| ||||||||| |||||||    
T  29832354 gttcctttttaattgtctccttttgacattttacttataccaagacaatcaataattgttacaacttttgatgcaataag 29832433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 38027565 - 38027620
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaa 232  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||| ||| ||||    
T  38027565 ctccgttcctttttaattgtcactttttgatattttacataaaccaaaacactcaa 38027620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 272
Target Start/End: Complemental strand, 42645507 - 42645420
Alignment:
Q  185 ctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttac 272  Q
    |||||||||| ||||||||||| |||||||| | || |||| |||||| ||||| || |||||||||| ||||||| |||| ||||||    
T  42645507 ctttttaattatcacattttgacattttacatatactaagataatcaataattgttattacttttgatgcaataagttatacttttac 42645420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 275
Target Start/End: Original strand, 49122258 - 49122349
Alignment:
Q  185 ctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatacta-cttttgatacaataagctatatttttactat 275  Q
    |||||||||||||| ||||||| |||||||||||||||| |||||||| || |  |||||  ||||||||||||||  | ||||||||||||    
T  49122258 ctttttaattgtcatattttgacattttacacaaaccaaaacaatcaataaatattactattttttgatacaataatttttatttttactat 49122349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 55935361 - 55935306
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaa 232  Q
    |||||||||||||||| |||||| ||||||||||||||||||| ||||||| ||||    
T  55935361 ctccgttcctttttaactgtcactttttgatattttacacaaatcaagacactcaa 55935306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 227
Target Start/End: Original strand, 8456901 - 8456951
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagaca 227  Q
    ||||||||||||||||||||||||||||||  || ||||||||||||||||    
T  8456901 ctccgttcctttttaattgtcacattttgactttctacacaaaccaagaca 8456951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 180 - 250
Target Start/End: Complemental strand, 17698713 - 17698643
Alignment:
Q  180 cgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttg 250  Q
    ||||||||||||||||||| ||||||| |||||||| ||||||||| | ||||  |||| |||||||||||    
T  17698713 cgttcctttttaattgtcatattttgacattttacataaaccaagatagtcaatgattgttactacttttg 17698643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 29511297 - 29511199
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||| |||||||||||||| |||||| |||||||| ||||||||| | |  | || || ||||||||||||||||| ||  |||| |||||||||    
T  29511297 ctccgttcatttttaattgtcaccttttgacattttacataaaccaagaaatttcataaatgttactacttttgatacaacaatgtatacttttactat 29511199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 227
Target Start/End: Complemental strand, 34603874 - 34603828
Alignment:
Q  181 gttcctttttaattgtcacattttgatattttacacaaaccaagaca 227  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||    
T  34603874 gttcctttttaattgtcacattttgattttttacacaaatcaagaca 34603828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 36659417 - 36659515
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||| ||||||||||  |||||| |||||||||||| |||||||||||| ||||| |  || |||| || ||||||| |||  |||||||||    
T  36659417 ctccgttccttcttaattgtcattttttgacattttacacaaatcaagacaatcaataattgtttttatttttaatgcaataagttatgcttttactat 36659515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 211 - 257
Target Start/End: Original strand, 53691678 - 53691724
Alignment:
Q  211 ttacacaaaccaagacaatcaacaattgatactacttttgatacaat 257  Q
    |||||||||||||||||||||| || |||||||||||||||||||||    
T  53691678 ttacacaaaccaagacaatcaataaatgatactacttttgatacaat 53691724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 171 - 259
Target Start/End: Original strand, 44176573 - 44176661
Alignment:
Q  171 tattaactccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataa 259  Q
    ||||| ||||||| ||||||||||||||| |||| | |||||||| ||||||| ||| | || || |  ||||||||||||||||||||    
T  44176573 tattacctccgtttctttttaattgtcactttttaacattttacataaaccaaaacatttaataaatattactacttttgatacaataa 44176661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 1180891 - 1180942
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaa 228  Q
    ||||||||||||||||||||||| ||| | | ||||||||||||||||||||    
T  1180891 ctccgttcctttttaattgtcacttttaggttttttacacaaaccaagacaa 1180942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 259
Target Start/End: Original strand, 26933769 - 26933844
Alignment:
Q  184 cctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataa 259  Q
    |||||||||  ||||| || ||| |||||||||||||||| |||||||| || || |||||||||||| |||||||    
T  26933769 cctttttaaccgtcactttgtgacattttacacaaaccaaaacaatcaataaatgttactacttttgacacaataa 26933844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 227
Target Start/End: Complemental strand, 14090490 - 14090444
Alignment:
Q  181 gttcctttttaattgtcacattttgatattttacacaaaccaagaca 227  Q
    |||| |||||||||||||||||||||| |||||||||||| ||||||    
T  14090490 gttcttttttaattgtcacattttgattttttacacaaactaagaca 14090444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 227
Target Start/End: Complemental strand, 18091496 - 18091446
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagaca 227  Q
    |||||||| |||||||||||||||||||||  || ||||||||||||||||    
T  18091496 ctccgttcttttttaattgtcacattttgactttatacacaaaccaagaca 18091446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 275
Target Start/End: Complemental strand, 40412193 - 40412099
Alignment:
Q  181 gttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||| ||||| |||||  |||||| |||||||| |||  |||||||| || ||||| ||||| |||||||  |||||| ||||||||||||||    
T  40412193 gttcctatttaactgtcattttttgacattttacataaattaagacaattaataattgttactatttttgatgtaataagttatatttttactat 40412099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 259
Target Start/End: Complemental strand, 47751780 - 47751702
Alignment:
Q  181 gttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataa 259  Q
    ||||||||||||||||||| || ||| |||||||||||||||| | |||  | || || ||||| ||||||||||||||    
T  47751780 gttcctttttaattgtcactttgtgacattttacacaaaccaaaataatttataaatgttactatttttgatacaataa 47751702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 256
Target Start/End: Original strand, 48509865 - 48509938
Alignment:
Q  182 ttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaa 256  Q
    |||||||||||||||||||||||||  ||||||| ||| |||||||| |||  |||  |||||||||||||||||    
T  48509865 ttcctttttaattgtcacattttgactttttacataaatcaagacaa-caaatatttttactacttttgatacaa 48509938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 243
Target Start/End: Original strand, 23621583 - 23621641
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatact 243  Q
    |||||||||||||||||||||||||||||        |||||||||||||||||||||||| |||||    
T  23621583 ctccgttcctttttaattgtcacattttg--------cacaaaccaagacaatcaacaattaatact 23621641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 225
Target Start/End: Original strand, 1391161 - 1391209
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaaga 225  Q
    ||||||||||||||| ||||||| ||||||  |||||||||||||||||    
T  1391161 ctccgttcctttttatttgtcactttttgactttttacacaaaccaaga 1391209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 228
Target Start/End: Complemental strand, 9746479 - 9746431
Alignment:
Q  180 cgttcctttttaattgtcacattttgatattttacacaaaccaagacaa 228  Q
    |||||||||||||||||||| |||  || ||||||||||||||||||||    
T  9746479 cgttcctttttaattgtcacttttgaattttttacacaaaccaagacaa 9746431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 178 - 252
Target Start/End: Original strand, 1146037 - 1146111
Alignment:
Q  178 tccgttcctttttaattgtcacattttga-tattttacacaaaccaagacaatcaacaattgatactacttttgat 252  Q
    |||||||||||||||||||||| |||||| | ||||||||||||||||| ||| || | ||  |||||||||||||    
T  1146037 tccgttcctttttaattgtcac-ttttgagttttttacacaaaccaagataataaatactttttactacttttgat 1146111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 14949077 - 14949120
Alignment:
Q  180 cgttcctttttaattgtcacattttgatattttacacaaaccaa 223  Q
    |||||||||||||||| ||||||||||  |||||||||||||||    
T  14949077 cgttcctttttaattgccacattttgacgttttacacaaaccaa 14949120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 257
Target Start/End: Complemental strand, 34361276 - 34361229
Alignment:
Q  210 tttacacaaaccaagacaatcaacaattgatactacttttgatacaat 257  Q
    ||||||||||| ||||||||||| || || ||||||||||||||||||    
T  34361276 tttacacaaactaagacaatcaataaatgttactacttttgatacaat 34361229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 232
Target Start/End: Original strand, 52977923 - 52977974
Alignment:
Q  181 gttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaa 232  Q
    |||| ||||||||||| || |||||| |||||||||||||||||| ||||||    
T  52977923 gttcatttttaattgttaccttttgacattttacacaaaccaagataatcaa 52977974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 182 - 225
Target Start/End: Original strand, 55430302 - 55430345
Alignment:
Q  182 ttcctttttaattgtcacattttgatattttacacaaaccaaga 225  Q
    ||||||||||||||||||||||| |  |||||||||||||||||    
T  55430302 ttcctttttaattgtcacatttttactttttacacaaaccaaga 55430345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 228
Target Start/End: Original strand, 56499610 - 56499653
Alignment:
Q  185 ctttttaattgtcacattttgatattttacacaaaccaagacaa 228  Q
    ||||||||||||||| ||||||  ||||||||||||||||||||    
T  56499610 ctttttaattgtcaccttttgactttttacacaaaccaagacaa 56499653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 223
Target Start/End: Original strand, 51654867 - 51654909
Alignment:
Q  181 gttcctttttaattgtcacattttgatattttacacaaaccaa 223  Q
    ||||||||||||| ||||||||||||  |||||||||||||||    
T  51654867 gttcctttttaatcgtcacattttgactttttacacaaaccaa 51654909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 223
Target Start/End: Original strand, 4201321 - 4201366
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaa 223  Q
    ||||||| |||| |||||||||||||||| |||||||| |||||||    
T  4201321 tccgttcgttttcaattgtcacattttgacattttacataaaccaa 4201366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #102
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 232
Target Start/End: Complemental strand, 7243058 - 7243005
Alignment:
Q  180 cgttcctttttaattgtca-cattttgatattttacacaaaccaagacaatcaa 232  Q
    |||| |||||||||||| | |||||||| |||||||||||||||| ||||||||    
T  7243058 cgtttctttttaattgttaacattttgacattttacacaaaccaaaacaatcaa 7243005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #103
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 177 - 218
Target Start/End: Complemental strand, 34361744 - 34361703
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaa 218  Q
    ||||||| ||||||||||||||| |||||| |||||||||||    
T  34361744 ctccgttactttttaattgtcactttttgacattttacacaa 34361703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #104
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 177 - 214
Target Start/End: Complemental strand, 36409006 - 36408969
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttac 214  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  36409006 ctccgttcctttttaattgtcatattttgacattttac 36408969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #105
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 177 - 214
Target Start/End: Complemental strand, 36423172 - 36423135
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttac 214  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  36423172 ctccgttcctttttaattgtcatattttgacattttac 36423135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #106
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 177 - 258
Target Start/End: Original strand, 52057442 - 52057522
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaata 258  Q
    |||| ||||||||||| ||| ||  ||||| ||||||||||||||||  ||||||| || |  |||||||||||||||||||    
T  52057442 ctcccttcctttttaactgt-actatttgacattttacacaaaccaatccaatcaataaatattactacttttgatacaata 52057522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #107
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 253
Target Start/End: Complemental strand, 31370055 - 31369979
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgata 253  Q
    ||||||| |||||||| |||||| ||  || |||||||||||||||| ||| |||| || || || |||||||||||    
T  31370055 ctccgtttctttttaagtgtcactttaagacattttacacaaaccaatacattcaataaatgttattacttttgata 31369979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #108
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 228
Target Start/End: Original strand, 37551660 - 37551707
Alignment:
Q  181 gttcctttttaattgtcacattttga-tattttacacaaaccaagacaa 228  Q
    ||||||||||||||||||| |||||| | ||||||||||||||||||||    
T  37551660 gttcctttttaattgtcac-ttttgagttttttacacaaaccaagacaa 37551707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 91; Significance: 4e-44; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 15893572 - 15893670
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  15893572 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagctatacttttactat 15893670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 15182993 - 15183091
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  15182993 ctccgttcctttttaattgtcacattttgacattttacacaaaccaagataatcaacaattgatactacttttgatgcaataagctatatttttactat 15183091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 10812450 - 10812352
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||    
T  10812450 ctccgttcctttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactacttttgatgccataagctatacttttactat 10812352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 26342831 - 26342733
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  26342831 ctccgttcctttttaattgtcacgttttgacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagctatacttttactat 26342733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 36375824 - 36375726
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||    
T  36375824 ctccgttcctttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactacctttgatgcaataagctataattttactat 36375726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 178 - 275
Target Start/End: Complemental strand, 14308643 - 14308546
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  14308643 tccgtttctttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagctatacttttactat 14308546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 3363835 - 3363737
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||    
T  3363835 ctccgttcctttttaattgtcgcattttgacattttacacaaaccaagacaatcaataattgatactacttttgatgcaataagctatacttttactat 3363737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 169 - 271
Target Start/End: Original strand, 3376261 - 3376363
Alignment:
Q  169 tatattaactccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatattt 268  Q
    ||||||| |||||||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||| ||| ||||||||||||||    
T  3376261 tatattacctccgttcctttttaattgtcacattttgacattttacacaaatcaagacaatcaataattgatactacttttaatataataagctatattt 3376360  T
Q  269 tta 271  Q
    |||    
T  3376361 tta 3376363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 30264594 - 30264692
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||    
T  30264594 ctccgttcctttttaattgtcacattttgacattttacataaaccaagacaatcaacaattgatactacttttgatgcaataaactatacttttactat 30264692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 182 - 275
Target Start/End: Original strand, 14295754 - 14295847
Alignment:
Q  182 ttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |||||||||    
T  14295754 ttcctttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataaggtatacttttactat 14295847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 177 - 273
Target Start/End: Complemental strand, 41885876 - 41885780
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttact 273  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || |||||||    
T  41885876 ctccgttcctttttcattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagctgtacttttact 41885780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 168 - 275
Target Start/End: Complemental strand, 19594610 - 19594503
Alignment:
Q  168 atatattaactccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatt 267  Q
    ||||| || ||||||| |||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||| |||||||||| ||||||||||||||    
T  19594610 atatactacctccgttactttttaattgtcacattttgacattttacacaaacaaagataatcaacaattgatattacttttgatgcaataagctatatt 19594511  T
Q  268 tttactat 275  Q
    ||||||||    
T  19594510 tttactat 19594503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 34399453 - 34399355
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||    
T  34399453 ctccgttcctttttaattatcacattttgacactttacacaaaccaagacaatcaacaattgatactacttttgatgcaataaactatacttttactat 34399355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 37093700 - 37093602
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| ||||||| |||| |||||||||    
T  37093700 ctccgtacctttttaattgtcacattttgacattttacacaaaccaagacaattaacaattgatactacttttgatgcaataagttatacttttactat 37093602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 34357429 - 34357331
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||| ||||||||||| |||||| ||||||| ||||||| ||||||||||||||    
T  34357429 ctccgttcctttttaattgtcacatttcgacattttacacaaaccaagataatcaacaatttatactatttttgatgcaataagttatatttttactat 34357331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 177 - 271
Target Start/End: Complemental strand, 44360684 - 44360590
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatattttta 271  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||| ||||||| |||| |||||    
T  44360684 ctccgttcctttttaattgtcacattttgacattttacacaaaccaagacaatcaataattgttactacttttgatgcaataagttatactttta 44360590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 166 - 275
Target Start/End: Complemental strand, 10264018 - 10263910
Alignment:
Q  166 aaatatattaactccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctata 265  Q
    |||||||||| ||||||||||||| |||||||| ||||||| ||||||||||||||||||||| ||| ||||||||||||||||||| |||||| |||||    
T  10264018 aaatatattacctccgttccttttaaattgtcatattttgacattttacacaaaccaagacaaccaa-aattgatactacttttgatgcaataaactata 10263920  T
Q  266 tttttactat 275  Q
     |||||||||    
T  10263919 cttttactat 10263910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 1259621 - 1259716
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttac 272  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||  |||||| ||||| ||||||    
T  1259621 ctccgtttctttttaattgttacattttgatattttacacaaaccaagagaatcaacaattgatactacttttgacgcaataaactataattttac 1259716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 181 - 275
Target Start/End: Original strand, 478969 - 479063
Alignment:
Q  181 gttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||| ||||||||||||||||||| | |||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||| |||||||||    
T  478969 gttcttttttaattgtcacattttaacattttacacaaaccaagataatcaataattgatactacttttgatgcaataagctatacttttactat 479063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 178 - 275
Target Start/End: Complemental strand, 14288679 - 14288584
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||||||||||||||||| |||||  ||||||||||| |||||||||||||||| || |||||||||||| |||||||||    
T  14288679 tccgttcctttttaattgtcacattttgatattttatacaaa--aagacaatcaataattgatactactttttatgcaataagctatacttttactat 14288584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 25558178 - 25558276
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||| || || ||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||||    
T  25558178 ctccgttctttcttgattgttacattttgacattttacacaaaccaagacaatcaaaaattgatactacttttgatacaataagctagacttttactat 25558276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 177 - 267
Target Start/End: Original strand, 38072224 - 38072314
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatt 267  Q
    ||||||||||||||| |||||| ||||| | |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  38072224 ctccgttcctttttatttgtcatattttaacattttacacaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatatt 38072314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 34262814 - 34262912
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||||||||||||||  |||| |||||||||||||||||||||| |||| ||||| |||||||||||||| |||||  ||||||||||||||    
T  34262814 ctccgttcctttttaattgtcaattttttatattttacacaaaccaagacattcaataattgttactacttttgatataataatatatatttttactat 34262912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 181 - 265
Target Start/End: Complemental strand, 14284330 - 14284247
Alignment:
Q  181 gttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctata 265  Q
    |||| ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  14284330 gttcttttttaattgtcacattttgacattt-acacaaaccaagacaatcaacaattgatactaattttgatgcaataagctata 14284247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 180 - 265
Target Start/End: Original strand, 28145566 - 28145653
Alignment:
Q  180 cgttcctttttaattgtcacattttgatatttt--acacaaaccaagacaatcaacaattgatactacttttgatacaataagctata 265  Q
    |||||||||||||||||||||||||||||||||  | | ||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  28145566 cgttcctttttaattgtcacattttgatattttttatataaatcaagacaatcaacaattgatactacttttgatgcaataagctata 28145653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 275
Target Start/End: Original strand, 38186054 - 38186142
Alignment:
Q  187 ttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||||  ||||| |||||||||||||||    
T  38186054 tttttattgtcacattttgatattttacacaaactaagacaatcaacaattgatattatttttgatgtaataaactatatttttactat 38186142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 185 - 275
Target Start/End: Original strand, 11560047 - 11560137
Alignment:
Q  185 ctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||  |||||||| || |||||||||    
T  11560047 ctttttaattatcacattttgacattttacataaaccaagacaatcaacaattgatattacttttgatgtaataagctgtacttttactat 11560137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 171 - 275
Target Start/End: Original strand, 36404827 - 36404931
Alignment:
Q  171 tattaactccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatattttt 270  Q
    ||||| |||| ||| ||||||||||||||||||||||||||||||  |||||||| | ||||  |||| ||||||||||||| ||||||| |||||||||    
T  36404827 tattagctccattcatttttaattgtcacattttgatattttacatgaaccaagatagtcaatgattgttactacttttgatgcaataagttatattttt 36404926  T
Q  271 actat 275  Q
    |||||    
T  36404927 actat 36404931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 13965858 - 13965760
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||| |  ||| |||||| ||||||| |||  |||||||||    
T  13965858 ctccgttcctttttaattgtcactttttgacattttacacaaaccaagacaatcaataattgtttttacatttgatccaataagttatgcttttactat 13965760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 177 - 259
Target Start/End: Original strand, 31011710 - 31011792
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataa 259  Q
    |||||||||||||||||||| ||||||||| |||||| |||||||||||||||||| || || | ||||||||||||||||||    
T  31011710 ctccgttcctttttaattgttacattttgacattttatacaaaccaagacaatcaataaatgttgctacttttgatacaataa 31011792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 167 - 260
Target Start/End: Original strand, 11222298 - 11222391
Alignment:
Q  167 aatatattaactccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataag 260  Q
    |||||| || |||||||||||||||||||||||||||||| |||||||| ||||||||| | ||||  |||| ||||||||||||| |||||||    
T  11222298 aatatactacctccgttcctttttaattgtcacattttgacattttacataaaccaagatagtcaatgattgttactacttttgatgcaataag 11222391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 178 - 259
Target Start/End: Complemental strand, 13754205 - 13754125
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataa 259  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||  || || ||||||||||||||||||||    
T  13754205 tccgttcctttttaattgtcac-ttttgacattttacacaaaccaagacaatcattaaatgttactacttttgatacaataa 13754125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 179 - 258
Target Start/End: Complemental strand, 9707036 - 9706957
Alignment:
Q  179 ccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaata 258  Q
    ||||||||||||||||||||| |||||| |||||||||||||||| |||||||| || |  |||||||||||||||||||    
T  9707036 ccgttcctttttaattgtcactttttgacattttacacaaaccaatacaatcaataaatattactacttttgatacaata 9706957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 13215644 - 13215546
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||| || |||||| |||||||||||||||| ||| |||| || || |||||||||||||||||| |  | ||||||||||||    
T  13215644 ctccgttcctttttaattgttactttttgacattttacacaaaccaatacactcaataaatgttactacttttgatacaatgatatgtatttttactat 13215546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 171 - 257
Target Start/End: Complemental strand, 43077549 - 43077463
Alignment:
Q  171 tattaactccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaat 257  Q
    ||||| ||||||||||||||||||||||  |||| | ||||||||||||||||||||||||| || || || |||||||||||||||    
T  43077549 tattacctccgttcctttttaattgtcattttttaacattttacacaaaccaagacaatcaataagtgttattacttttgatacaat 43077463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 273
Target Start/End: Original strand, 35158332 - 35158439
Alignment:
Q  166 aaatatattaactccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctata 265  Q
    ||||||| || ||||||| ||||||||||||||| |||||| ||||||||  |||||||||| |||| || |  ||||||||||||||||||||  ||||    
T  35158332 aaatatactacctccgtttctttttaattgtcactttttgacattttacatgaaccaagacattcaataaatattactacttttgatacaataatatata 35158431  T
Q  266 tttttact 273  Q
     |||||||    
T  35158432 cttttact 35158439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 4654970 - 4654872
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||||||||||||| |||||||| |||||||| ||||||| | | ||||  |||| ||||||||||||| ||||||| | | ||||||||||    
T  4654970 ctccgttcctttttaattgtctcattttgacattttacataaaccaaaatagtcaatgattgttactacttttgatgcaataagttgtgtttttactat 4654872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 181 - 232
Target Start/End: Complemental strand, 8443925 - 8443874
Alignment:
Q  181 gttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaa 232  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  8443925 gttcctttttaattgtcactttttgacattttacacaaaccaagacaatcaa 8443874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 187 - 271
Target Start/End: Original strand, 15677298 - 15677377
Alignment:
Q  187 ttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatattttta 271  Q
    |||||||||||||||||||| ||    ||||||||||||||||||||| ||||||||||||||||| ||||||| |||| |||||    
T  15677298 ttttaattgtcacattttgacat----cacaaaccaagacaatcaaca-ttgatactacttttgatgcaataagttatactttta 15677377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 178 - 257
Target Start/End: Original strand, 25186823 - 25186902
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaat 257  Q
    |||||||||||||||  ||||| |||||| |||||||||||||||||| |||||| |  || ||||||||||||||||||    
T  25186823 tccgttcctttttaaccgtcactttttgacattttacacaaaccaagataatcaatatatgttactacttttgatacaat 25186902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 254
Target Start/End: Complemental strand, 14541579 - 14541505
Alignment:
Q  180 cgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatac 254  Q
    |||||||||||||||||||| |||||| |||||| ||||||||| |||||||| || |  |||||||||||||||    
T  14541579 cgttcctttttaattgtcactttttgacattttatacaaaccaatacaatcaataaatattactacttttgatac 14541505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 257
Target Start/End: Complemental strand, 9370217 - 9370145
Alignment:
Q  185 ctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaat 257  Q
    ||||||||||||||| |||||| |||||||| |||||||||| || || || || ||||||||||||||||||    
T  9370217 ctttttaattgtcactttttgacattttacataaaccaagaccattaataagtgttactacttttgatacaat 9370145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 177 - 257
Target Start/End: Original strand, 37116595 - 37116675
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaat 257  Q
    ||||||||||||||||||||||   | ||| ||||||||||||||||||||| ||| || || ||||| ||||||||||||    
T  37116595 ctccgttcctttttaattgtcattctctgacattttacacaaaccaagacaaccaataaatgttactatttttgatacaat 37116675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 228
Target Start/End: Complemental strand, 25787574 - 25787527
Alignment:
Q  181 gttcctttttaattgtcacattttgatattttacacaaaccaagacaa 228  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||    
T  25787574 gttcctttttaattgtcacattttgactttttacacaaaccaagacaa 25787527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 259
Target Start/End: Original strand, 13000907 - 13000985
Alignment:
Q  181 gttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataa 259  Q
    |||| ||||||||||| || || ||| ||||||||||||  ||||||||||| || || ||||||||||||||||||||    
T  13000907 gttcttttttaattgttactttgtgacattttacacaaattaagacaatcaataaatgttactacttttgatacaataa 13000985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 232
Target Start/End: Original strand, 31024933 - 31024987
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaa 232  Q
    ||||||||||||||| ||| || ||||||||||||||||||||||||||| ||||    
T  31024933 tccgttcctttttaactgtaactttttgatattttacacaaaccaagacactcaa 31024987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 257
Target Start/End: Original strand, 34884533 - 34884610
Alignment:
Q  180 cgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaat 257  Q
    ||||| |||| || |||||| |||||| |||||||||||||||||| |||||| || |  ||||||||||||||||||    
T  34884533 cgttcattttaaactgtcactttttgacattttacacaaaccaagataatcaataaatattactacttttgatacaat 34884610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 838068 - 838112
Alignment:
Q  183 tcctttttaattgtcacattttgatattttacacaaaccaagaca 227  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||    
T  838068 tcctttttaattgtcgcattttgattttttacacaaaccaagaca 838112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 177 - 257
Target Start/End: Original strand, 13849707 - 13849787
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaat 257  Q
    ||||||||||||||||||||||  ||||||||||||| | ||||||| |||||||| || |  || || ||||||||||||    
T  13849707 ctccgttcctttttaattgtcattttttgatattttatataaaccaaaacaatcaataaatattattagttttgatacaat 13849787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 179 - 254
Target Start/End: Original strand, 4952690 - 4952765
Alignment:
Q  179 ccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatac 254  Q
    ||||||||||||||||||||| |||||| |||||||| ||||||| |  ||||| || || |||||||||| ||||    
T  4952690 ccgttcctttttaattgtcactttttgacattttacataaaccaaaatgatcaataaatgttactacttttaatac 4952765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 32674702 - 32674647
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaa 232  Q
    ||||||||||| |||| |||||| || |||||||||||||||||||||||| ||||    
T  32674702 ctccgttccttcttaactgtcactttgtgatattttacacaaaccaagacagtcaa 32674647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 227
Target Start/End: Complemental strand, 37354240 - 37354190
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagaca 227  Q
    ||||||||| |||||||||||||||||| || ||||||||||| |||||||    
T  37354240 ctccgttccattttaattgtcacattttaattttttacacaaatcaagaca 37354190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 275
Target Start/End: Complemental strand, 4883849 - 4883756
Alignment:
Q  182 ttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||||||||||||||||| |||||||| |||| || | |  |||  |||| |||||||||||||  |||||| | || |||||||||    
T  4883849 ttcctttttaattgtcacattttgacattttacataaactaatatagccaatgattgttactacttttgatgtaataagttgtacttttactat 4883756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 223
Target Start/End: Complemental strand, 36173309 - 36173264
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaa 223  Q
    ||||||| |||||||||||||||||||||  |||||||||||||||    
T  36173309 tccgttcttttttaattgtcacattttgactttttacacaaaccaa 36173264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 1395814 - 1395717
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||| ||| || |||||| |||||||||||||||| ||| | || || || ||||  || | |||||||||  ||||||||||||||    
T  1395814 ctccgttcctttttaactgt-actttttgacattttacacaaaccaatacacttaataaatgttactttttcttatacaataatttatatttttactat 1395717  T

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Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 223
Target Start/End: Original strand, 33947429 - 33947467
Alignment:
Q  185 ctttttaattgtcacattttgatattttacacaaaccaa 223  Q
    ||||||||||||||||||||||| || ||||||||||||    
T  33947429 ctttttaattgtcacattttgattttctacacaaaccaa 33947467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 177 - 257
Target Start/End: Original strand, 32854774 - 32854852
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaat 257  Q
    |||||||||||||||| |||||| |||| | |||||  |||||| |||| |||||| || || || |||||||||||||||    
T  32854774 ctccgttcctttttaactgtcactttttaacatttt--acaaactaagataatcaataaatgttattacttttgatacaat 32854852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 8405 - 8307
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |||||||||    
T  8405 ctccgttcctttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagttatacttttactat 8307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 83; Significance: 2e-39; HSPs: 64)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 33099827 - 33099925
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |||||||||    
T  33099827 ctccgttcttttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagttatacttttactat 33099925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 8265200 - 8265102
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||    
T  8265200 ctccgttcttttttaattgtcacattttgaaattttacacaaaccaagacaatcaacaattgatactccttttgatgcaataaactatatttttactat 8265102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 12838070 - 12838168
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||  ||||||||    
T  12838070 ctccgatcctttttaattgtcacattttgatattttacacaaaccaagacaatcaaaaattgatattacttttgatacaataagctatacctttactat 12838168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 180 - 275
Target Start/End: Complemental strand, 7312865 - 7312770
Alignment:
Q  180 cgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||| |||||||||    
T  7312865 cgttcctttgtaattgtcacattttgatattttacacaaatcaagacaatcaacaattgatactacttttgatgcaataagttatacttttactat 7312770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 8382077 - 8381979
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||| |||||||||    
T  8382077 ctccgttcctttttaattatcacattttgacattttacacaaaccaagacaatcaacaattgatattacttttgatgcaataagatatacttttactat 8381979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 181 - 275
Target Start/End: Complemental strand, 31430806 - 31430712
Alignment:
Q  181 gttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| || |||||||||||| |||||||||    
T  31430806 gttcctttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactatttttcatgcaataagctatacttttactat 31430712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 170 - 275
Target Start/End: Original strand, 32966034 - 32966139
Alignment:
Q  170 atattaactccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttt 269  Q
    |||||| |||||||||||||||||||||||||||| | ||||||||||||  ||||||||||||||||||||| ||||||||| |||||||||||| |||    
T  32966034 atattacctccgttcctttttaattgtcacattttaacattttacacaaattaagacaatcaacaattgataccacttttgatgcaataagctatacttt 32966133  T
Q  270 tactat 275  Q
    ||||||    
T  32966134 tactat 32966139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 184 - 275
Target Start/End: Complemental strand, 41891514 - 41891423
Alignment:
Q  184 cctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||| |||||||||    
T  41891514 cctttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactaattttgatgcaataagttatacttttactat 41891423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 181 - 275
Target Start/End: Complemental strand, 18470554 - 18470460
Alignment:
Q  181 gttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||| || |||||||||||| |||||||||    
T  18470554 gttcctttttaattgtcgcattttaatattttacgcaaaccaagacaatcaacaattgatactactttttatgcaataagctatacttttactat 18470460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 170 - 271
Target Start/End: Original strand, 22950803 - 22950904
Alignment:
Q  170 atattaactccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttt 269  Q
    |||||| ||| |||||||||||||||| | ||||||| |||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |||    
T  22950803 atattacctctgttcctttttaattgttatattttgacattttacacaaaccaagacaataaaaaattgatactacttttgatacaataagctatacttt 22950902  T
Q  270 ta 271  Q
    ||    
T  22950903 ta 22950904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 29497526 - 29497624
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||| |||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||||||||||| || | |||||||||| |||||||||    
T  29497526 ctccgtttctttttaattatcacattttgacattttacacaaaccaggacaatcaacaattgatactactttttatgccataagctatacttttactat 29497624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 32528320 - 32528418
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||| ||||||||||||| ||||||| |||||| ||||| |||||||||||||||||||| ||||||||||| |||||||||||| |||||||||    
T  32528320 ctccgttcatttttaattgtcatattttgacattttatacaaatcaagacaatcaacaattgatgctacttttgatgcaataagctatacttttactat 32528418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 168 - 249
Target Start/End: Original strand, 17896474 - 17896555
Alignment:
Q  168 atatattaactccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactactttt 249  Q
    ||||| || |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  17896474 atatactacctccgttcctttttaattgtcacattttgacattttacacaaatcaagacaatcaacaattgatactactttt 17896555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 176 - 275
Target Start/End: Original strand, 44480132 - 44480232
Alignment:
Q  176 actccgttcctttttaattg-tcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttacta 274  Q
    ||||||||||||||||| || |  |||||||| ||||||||||||||||||||||||||||||||||||| |||| || |||||||||||||||||||||    
T  44480132 actccgttcctttttaaatggttgcattttgacattttacacaaaccaagacaatcaacaattgatactattttttatgcaataagctatatttttacta 44480231  T
Q  275 t 275  Q
    |    
T  44480232 t 44480232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 36922491 - 36922392
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactac-ttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||||||||||| |||||| | ||| ||||||||||||||||||||| ||| ||||||| ||||||||||| ||||||||||    
T  36922491 ctccgttcctttttaattgtcacattttgacattttaaataaatcaagacaatcaacaattgatattactttttgatgcaataagctatgtttttactat 36922392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 178 - 257
Target Start/End: Original strand, 42841859 - 42841938
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaat 257  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||| || || ||||||||||||||||||    
T  42841859 tccgttcctttttaattgtcactttttgatattttacacaaaccaagacaatcaataaatgttactacttttgatacaat 42841938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 181 - 275
Target Start/End: Original strand, 29722301 - 29722395
Alignment:
Q  181 gttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||| ||||||||||||||| | ||||||| ||||||||||||||||||||| ||||||||||||||| ||||||| |||| |||||||||    
T  29722301 gttcctttataattgtcacattttaacattttacgcaaaccaagacaatcaacaatcgatactacttttgatgcaataagttatacttttactat 29722395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 181 - 275
Target Start/End: Original strand, 41675183 - 41675276
Alignment:
Q  181 gttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||| ||| ||||||| |||||||||||| |||||||||    
T  41675183 gttcctttttaattgtcacattttgacattttacataaaccaagacaatcaataattgat-ctatttttgatgcaataagctatagttttactat 41675276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 47408364 - 47408266
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||| |||| || || ||||||||||||||||||||  |||| |||||||||    
T  47408364 ctccgttcctttttaattgtcactttttgacattttacacaaaccaagacattcaataaatgttactacttttgatacaataatatatacttttactat 47408266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 186 - 275
Target Start/End: Original strand, 36298175 - 36298264
Alignment:
Q  186 tttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||||||||||||| |||||||||||| ||| |||||||| ||||| ||||||||||||| ||||||| ||||||||||||||    
T  36298175 tttttaattgtcacattttgacattttacacaaatcaaaacaatcaataattgttactacttttgatgcaataagttatatttttactat 36298264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 26724176 - 26724077
Alignment:
Q  177 ctccgttcctttttaattgtcacatttt-gatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||||||||||  |||  ||||||||||||| ||||||| |||| |||||||||    
T  26724176 ctccgttcctttttaattgtcacatttttgacattttacacaaaccaagacaatcaatgattattactacttttgatgcaataagttatacttttactat 26724077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 181 - 275
Target Start/End: Complemental strand, 28608841 - 28608747
Alignment:
Q  181 gttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||||| || || | ||||||||||||||||||  | ||||||||||||    
T  28608841 gttcctttttaattgtcatattttgatattttacacaaatcaagacaatcaataaatgttgctacttttgatacaataatttttatttttactat 28608747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 178 - 275
Target Start/End: Original strand, 31398925 - 31399022
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||| ||||||||||||||||||||   |||||||| ||||||||||||| || |||||||||||||||||||| ||||| ||||| |||||||||    
T  31398925 tccgttgctttttaattgtcacattttagcattttacataaaccaagacaattaaaaattgatactacttttgatataataaactatacttttactat 31399022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 167 - 275
Target Start/End: Original strand, 5732055 - 5732163
Alignment:
Q  167 aatatattaactccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatat 266  Q
    |||||| || |||||||||||||||||||||||||||||| |||||||| ||||||||| | ||||  |||| ||||||||||||| ||||||| | ||     
T  5732055 aatatactacctccgttcctttttaattgtcacattttgacattttacataaaccaagatagtcaatgattgttactacttttgatgcaataagttgtac 5732154  T
Q  267 ttttactat 275  Q
    |||||||||    
T  5732155 ttttactat 5732163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 168 - 275
Target Start/End: Complemental strand, 10227516 - 10227409
Alignment:
Q  168 atatattaactccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatt 267  Q
    ||||| || ||||||||||||||||||||||| |||| | |||||||||||| |||||||||||| ||||  | ||||||||||| ||||||| |||| |    
T  10227516 atatactacctccgttcctttttaattgtcactttttaacattttacacaaatcaagacaatcaataattatttctacttttgatgcaataagttatact 10227417  T
Q  268 tttactat 275  Q
    ||||||||    
T  10227416 tttactat 10227409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 178 - 257
Target Start/End: Original strand, 18194207 - 18194286
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaat 257  Q
    |||||||||||||||||||||  |||| | ||||||||||||||||||||||||| || |||||||||||||||||||||    
T  18194207 tccgttcctttttaattgtcagtttttcaaattttacacaaaccaagacaatcaataaatgatactacttttgatacaat 18194286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 177 - 260
Target Start/End: Complemental strand, 33174058 - 33173975
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataag 260  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||| | | ||||  |||| |||||||||||||||||||||    
T  33174058 ctccgttcctttttaattgtcacattttgacattttacataaaccaaaatagtcaatgattgttactacttttgatacaataag 33173975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 3838113 - 3838015
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||| |||||||||||||||||| |||||| ||||||| |||| |||||||||||| ||||| || |||||||||| | ||||| |||| |||||||||    
T  3838113 ctccattcctttttaattgtcactttttgacattttacgcaaatcaagacaatcaataattgttattacttttgatgccataagttatacttttactat 3838015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 33921766 - 33921864
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||||||||| | |||||||| |||| |||| | ||||  |||| ||||||||||||| ||||||  ||||||||||||||    
T  33921766 ctccgttcctttttaattgtcacattttaacattttacataaactaagatagtcaatgattgttactacttttgatgcaataaattatatttttactat 33921864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 177 - 271
Target Start/End: Original strand, 38168780 - 38168875
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaa-ttgatactacttttgatacaataagctatattttta 271  Q
    ||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||  || ||| ||||| ||||||| ||||||| |||| |||||    
T  38168780 ctccgtttctttttaattgtcactttttaatattttacacaaaccaagacaatcattaatttgttactatttttgatgcaataagttatactttta 38168875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 181 - 259
Target Start/End: Original strand, 19327787 - 19327865
Alignment:
Q  181 gttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataa 259  Q
    |||||||||||||||||||||||| | |||||||||||||||| |||||||| || |  | ||||||||||||||||||    
T  19327787 gttcctttttaattgtcacattttaacattttacacaaaccaaaacaatcaataaatattgctacttttgatacaataa 19327865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 170 - 252
Target Start/End: Original strand, 44820592 - 44820674
Alignment:
Q  170 atattaactccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgat 252  Q
    |||||| |||||||| ||||||| ||||| ||||||| |||||| |||||||||||||||||| ||||  |||||||||||||    
T  44820592 atattacctccgttcatttttaactgtcatattttgacattttatacaaaccaagacaatcaataattattactacttttgat 44820674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 178 - 275
Target Start/End: Original strand, 7477191 - 7477288
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||| |||||||||||| ||||||||| |||||||| |||| |||| | ||||  |||| ||||||||||||| ||||||| |||| |||||||||    
T  7477191 tccgtttctttttaattgttacattttgacattttacataaactaagatagtcaatgattgttactacttttgatgcaataagttatacttttactat 7477288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 177 - 258
Target Start/End: Complemental strand, 33258132 - 33258051
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaata 258  Q
    ||||||||||||||||||||||  |||||| |||||||||||| ||| |||||||| || |  |||||||||||||||||||    
T  33258132 ctccgttcctttttaattgtcattttttgacattttacacaaatcaatacaatcaataaatattactacttttgatacaata 33258051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 171 - 257
Target Start/End: Original strand, 31815055 - 31815140
Alignment:
Q  171 tattaactccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaat 257  Q
    ||||| ||||||||||||||||||||||  |||| | |||||||||||| ||||| |||||| || || ||||||||||||||||||    
T  31815055 tattacctccgttcctttttaattgtcattttttaacattttacacaaatcaagataatcaataa-tgttactacttttgatacaat 31815140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 178 - 227
Target Start/End: Original strand, 9601886 - 9601935
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagaca 227  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||    
T  9601886 tccgttcctttttaattgtcacattttgactttttacacaaaccaagaca 9601935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 178 - 227
Target Start/End: Original strand, 9829457 - 9829506
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagaca 227  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||    
T  9829457 tccgttcctttttaattgtcacattttgactttttacacaaaccaagaca 9829506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 186 - 275
Target Start/End: Complemental strand, 35112671 - 35112582
Alignment:
Q  186 tttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||| |||||| ||||||||||||| || |||||||| || |  |||||||||||||||||||    |||||||||||||    
T  35112671 tttttaattgtcactttttgacattttacacaaacaaatacaatcaataaatattactacttttgatacaatacttcatatttttactat 35112582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 3310456 - 3310401
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaa 232  Q
    |||||||||||||||| ||||| ||||||| ||||||| |||||||||||||||||    
T  3310456 ctccgttcctttttaactgtcatattttgacattttacgcaaaccaagacaatcaa 3310401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 252
Target Start/End: Complemental strand, 6799670 - 6799595
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgat 252  Q
    ||||||||||||||||||||||||| |||| |||||||| ||||||||||| |||   |||| ||||| |||||||    
T  6799670 ctccgttcctttttaattgtcacatgttgacattttacataaaccaagacagtcagtgattgttactatttttgat 6799595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 168 - 227
Target Start/End: Complemental strand, 35860225 - 35860166
Alignment:
Q  168 atatattaactccgttcctttttaattgtcacattttgatattttacacaaaccaagaca 227  Q
    |||||||  |||||||||||||||||||| |||||||||  |||||||||||||||||||    
T  35860225 atatattctctccgttcctttttaattgttacattttgactttttacacaaaccaagaca 35860166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 41888986 - 41889041
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaa 232  Q
    |||||||||||||||||| |||| || ||| |||||||||||||||||||||||||    
T  41888986 ctccgttcctttttaattatcactttgtgacattttacacaaaccaagacaatcaa 41889041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 176 - 259
Target Start/End: Complemental strand, 42881200 - 42881118
Alignment:
Q  176 actccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataa 259  Q
    |||| |||||||||||||||| |  ||||||||||||| ||||||||||||||| || ||||  ||||||||||||| ||||||    
T  42881200 actctgttcctttttaattgttat-ttttgatattttatacaaaccaagacaattaataatttttactacttttgatgcaataa 42881118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 30866728 - 30866826
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||| |||||  |||||| |||||||||||||||||||| |||| || || ||||  || | |||||||||  ||||| ||||||||    
T  30866728 ctccgttcctttttaactgtcattttttgacattttacacaaaccaagacactcaataaatgttactttttcttatacaataatttatatgtttactat 30866826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 231 - 275
Target Start/End: Original strand, 17896569 - 17896613
Alignment:
Q  231 aacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||    
T  17896569 aacaattgatattacttttgatgcaataagctatatttttactat 17896613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 177 - 253
Target Start/End: Complemental strand, 24283830 - 24283754
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgata 253  Q
    ||||||||||||||||||||||  |||| |  |||||||||||| |||||||| || || || ||||||||||||||    
T  24283830 ctccgttcctttttaattgtcatttttttaccttttacacaaactaagacaattaataaatgttactacttttgata 24283754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 181 - 257
Target Start/End: Original strand, 35746641 - 35746717
Alignment:
Q  181 gttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaat 257  Q
    ||||||||||||||||||| |||| | |||||||| |||  ||||||||||| || || ||||| ||||||||||||    
T  35746641 gttcctttttaattgtcactttttaacattttacataaattaagacaatcaataaatgttactatttttgatacaat 35746717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 8380584 - 8380639
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaa 232  Q
    |||||||||||||||| ||||   ||||||||||||||||||||||||||| ||||    
T  8380584 ctccgttcctttttaactgtccatttttgatattttacacaaaccaagacactcaa 8380639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 228
Target Start/End: Original strand, 46715308 - 46715355
Alignment:
Q  181 gttcctttttaattgtcacattttgatattttacacaaaccaagacaa 228  Q
    ||||||||||||||||||||||||||  ||||||||||| ||||||||    
T  46715308 gttcctttttaattgtcacattttgactttttacacaaatcaagacaa 46715355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 47459889 - 47459834
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaa 232  Q
    |||||||||||||||||||| |  ||||||||||||||||||| ||||||| ||||    
T  47459889 ctccgttcctttttaattgttattttttgatattttacacaaatcaagacattcaa 47459834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 275
Target Start/End: Complemental strand, 20035255 - 20035201
Alignment:
Q  221 caagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||||||||||||| | ||||| || |||||||||||| |||||||||    
T  20035255 caagacaatcaacaattgatattccttttaatgcaataagctatacttttactat 20035201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 275
Target Start/End: Complemental strand, 20045666 - 20045612
Alignment:
Q  221 caagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||||||||||||| | ||||| || |||||||||||| |||||||||    
T  20045666 caagacaatcaacaattgatattccttttaatgcaataagctatacttttactat 20045612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 219
Target Start/End: Original strand, 34368656 - 34368694
Alignment:
Q  181 gttcctttttaattgtcacattttgatattttacacaaa 219  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  34368656 gttcctttttaattgtcactttttgatattttacacaaa 34368694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 275
Target Start/End: Original strand, 36648011 - 36648095
Alignment:
Q  190 taattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||| |||| | ||||||||||||||||||||||||| ||||  |  |||||||||| ||||||| |||  |||||||||    
T  36648011 taattgtcac-ttttaacattttacacaaaccaagacaatcaataattatttttacttttgatgcaataagttatgcttttactat 36648095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 256
Target Start/End: Original strand, 8965892 - 8965971
Alignment:
Q  177 ctccgttcctttttaattgtcacattttga-tattttacacaaaccaagacaatcaacaattgatactacttttgatacaa 256  Q
    ||||||||||||||||||||||| |||||| | |||||| |||||||||||||  || | ||  |||||||||||||||||    
T  8965892 ctccgttcctttttaattgtcac-ttttgagttttttacgcaaaccaagacaacaaatactttttactacttttgatacaa 8965971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 225
Target Start/End: Complemental strand, 36407005 - 36406957
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaaga 225  Q
    ||||||| |||||||| |||||| |||||| ||||||||||||||||||    
T  36407005 ctccgtttctttttaactgtcactttttgacattttacacaaaccaaga 36406957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 228
Target Start/End: Complemental strand, 3178177 - 3178130
Alignment:
Q  181 gttcctttttaattgtcacattttgatattttacacaaaccaagacaa 228  Q
    ||||||||||||||||||| ||| ||| ||| ||||||||||||||||    
T  3178177 gttcctttttaattgtcacttttagatttttgacacaaaccaagacaa 3178130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 228
Target Start/End: Complemental strand, 22786126 - 22786079
Alignment:
Q  181 gttcctttttaattgtcacattttgatattttacacaaaccaagacaa 228  Q
    ||||| ||||||||||||||||||||  ||||||||||||||| ||||    
T  22786126 gttcccttttaattgtcacattttgactttttacacaaaccaaaacaa 22786079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 275
Target Start/End: Original strand, 26632215 - 26632270
Alignment:
Q  220 ccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||  ||||| |||||||| ||||||| |||||||||||| |||||||||    
T  26632215 ccaagacaaataacaaatgatactatttttgatgcaataagctatacttttactat 26632270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 256
Target Start/End: Original strand, 43874079 - 43874154
Alignment:
Q  181 gttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaa 256  Q
    ||||||||||||| ||| | |||||| ||||||||| ||| || ||| |||| || || |||||||||||||||||    
T  43874079 gttcctttttaatggtctctttttgacattttacacgaacaaatacattcaataaatgttactacttttgatacaa 43874154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 35684395 - 35684346
Alignment:
Q  179 ccgttcctttttaattgtcacattttgatattttacacaaaccaagacaa 228  Q
    ||||||||||||||||||||| |||  || |||||||||| |||||||||    
T  35684395 ccgttcctttttaattgtcacttttgaattttttacacaatccaagacaa 35684346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 231
Target Start/End: Complemental strand, 36340632 - 36340583
Alignment:
Q  182 ttcctttttaattgtcacattttgatattttacacaaaccaagacaatca 231  Q
    ||||||||||||||| |  |||| | ||||||||||||||||||||||||    
T  36340632 ttcctttttaattgttatttttttacattttacacaaaccaagacaatca 36340583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 275
Target Start/End: Original strand, 37353888 - 37353960
Alignment:
Q  203 ttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||| ||||||||  || ||| |||||||| ||||| |||||||| |||| ||||||| || |||||||||||    
T  37353888 ttgacattttacatgaatcaaaacaatcaataattgttactacttctgatgcaataagttacatttttactat 37353960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 257
Target Start/End: Original strand, 41408784 - 41408864
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaat 257  Q
    |||| ||| |||||||||||||| ||||   |||||||||||| ||||||||| || || || || || ||||||||||||    
T  41408784 ctccattcatttttaattgtcactttttatcattttacacaaatcaagacaattaataaatgttattaattttgatacaat 41408864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 83; Significance: 2e-39; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 3850571 - 3850473
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||    
T  3850571 ctccgttactttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatgccacaagctatatttttactat 3850473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 178 - 275
Target Start/End: Complemental strand, 24663629 - 24663532
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||||    
T  24663629 tccgttcctttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatattacttttgatgcaataagctatacttttactat 24663532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 168 - 275
Target Start/End: Original strand, 364523 - 364630
Alignment:
Q  168 atatattaactccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatt 267  Q
    ||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||||||| |    
T  364523 atatactacctccgtttctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatcttacttttgatgcaataagctatact 364622  T
Q  268 tttactat 275  Q
    ||||||||    
T  364623 tttactat 364630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 181 - 275
Target Start/End: Complemental strand, 3621837 - 3621743
Alignment:
Q  181 gttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |||||||||    
T  3621837 gttcctttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagttatacttttactat 3621743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 178 - 275
Target Start/End: Complemental strand, 17836143 - 17836046
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| || |||||||||||| |||||||||    
T  17836143 tccgttcctttttaattgtcacatattgatattttacacaaaccaagacaatcaacaattgattctacttttaatgcaataagctatacttttactat 17836046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 178 - 275
Target Start/End: Complemental strand, 12732425 - 12732328
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||||||||||||||||||| | |||||||||||| ||||||||| |||||||||||||||||||||| |||||||||||| |||||||||    
T  12732425 tccgttcctttttaattgtcacattttaacattttacacaaaacaagacaattaacaattgatactacttttgatgcaataagctatacttttactat 12732328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 170 - 275
Target Start/End: Original strand, 17123968 - 17124073
Alignment:
Q  170 atattaactccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttt 269  Q
    |||||| |||| ||||||||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||||||||||||| ||||||| |||| |||    
T  17123968 atattacctccattcctttttaattgtcacattttgacattttacacaaactaagacaatcaataattgatactacttttgatgcaataagttatacttt 17124067  T
Q  270 tactat 275  Q
    ||||||    
T  17124068 tactat 17124073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 1751421 - 1751519
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||| ||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||| ||||||| |||| |||||||||    
T  1751421 ctccgttcttttttaattgtcacattttgacattttacacaaatcaagataatcaacaattgatactacttttgatgcaataagttatacttttactat 1751519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 177 - 271
Target Start/End: Complemental strand, 22050299 - 22050205
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatattttta 271  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||| ||||||| |||| |||||    
T  22050299 ctccgttcctttttaattgtcacattttgacattttacacaaaccaagacaatcaataattgttactacttttgatgcaataagttatactttta 22050205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 182 - 275
Target Start/End: Original strand, 23923708 - 23923801
Alignment:
Q  182 ttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| ||  ||||||||||| |||||||||    
T  23923708 ttcctttttaattgtcacattttgacattttgcacaaaccaagacaatcaacaattgatactacttttaatgtaataagctatacttttactat 23923801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 32359430 - 32359528
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||||||| || |||||| ||| |||||||| |||||||||||| |||||||||    
T  32359430 ctccgttcctttttaattgttacattttgatattttatacaaaccaagacaattaataattgacacttcttttgatgcaataagctatacttttactat 32359528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 177 - 262
Target Start/End: Complemental strand, 30389017 - 30388932
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagct 262  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||| ||||||| |||||||||    
T  30389017 ctccgttcctttttaattatcacattttgacattttacacaaaccaagacaatcaacaattaatactatttttgatgcaataagct 30388932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 187 - 275
Target Start/End: Complemental strand, 373964 - 373876
Alignment:
Q  187 ttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||| |||||| ||||| |||||||||    
T  373964 ttttaattgtcacattttgacattttacataaaccaagacaatcagcaattgatactacttttgatgcaataaactatacttttactat 373876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 1252417 - 1252319
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||| ||||||||| ||||||||||| |||||| | |||| |||||||||||||||||||||||||||||||  ||||| |||||||||||||||    
T  1252417 ctccgttcatttttaattatcacattttgacattttatataaactaagacaatcaacaattgatactacttttgatgtaataaactatatttttactat 1252319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 17193409 - 17193311
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||||||||||||||| |||||| |||||| | |||||||||||||||||||||||| ||||||||||| ||||||| |||  |||||||||    
T  17193409 ctccgttcctttttaattgtcacgttttgacattttatataaaccaagacaatcaacaattgatcctacttttgatgcaataagttattattttactat 17193311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 30416065 - 30416163
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||| ||| || |||| |||||||| |||||||||||||||| ||||| ||||||||||||||||||||| |||| |||||||||    
T  30416065 ctccgttcctttttaattatcatatgttgacattttacataaaccaagacaatcaataattgttactacttttgatacaataagttatacttttactat 30416163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 182 - 275
Target Start/End: Original strand, 26470718 - 26470811
Alignment:
Q  182 ttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||| |||||| |||||||| |||||||||||||||| ||||| ||||||||||||| ||||||| |||| |||||||||    
T  26470718 ttcctttttaattgtcactttttgacattttacataaaccaagacaatcaataattgttactacttttgatgcaataagttatacttttactat 26470811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 178 - 257
Target Start/End: Original strand, 31244740 - 31244819
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaat 257  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||| || || || |||||||||||||||    
T  31244740 tccgttcctttttaattgtcacattttgattttttacacaaaccaagacaatcaataaatggtagtacttttgatacaat 31244819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 182 - 275
Target Start/End: Complemental strand, 8992795 - 8992701
Alignment:
Q  182 ttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaa-ttgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||  || ||| ||||||||||||| ||||||| |||| |||||||||    
T  8992795 ttcctttttaattgtcacattttgatattttacacaaaccaagataatcagtaatttgttactacttttgatgcaataagttatacttttactat 8992701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 182 - 275
Target Start/End: Complemental strand, 9017242 - 9017148
Alignment:
Q  182 ttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaa-ttgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||  || ||| ||||||||||||| ||||||| |||| |||||||||    
T  9017242 ttcctttttaattgtcacattttgatattttacacaaaccaagataatcagtaatttgttactacttttgatgcaataagttatacttttactat 9017148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 171 - 275
Target Start/End: Complemental strand, 23777553 - 23777449
Alignment:
Q  171 tattaactccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatattttt 270  Q
    ||||| || |||||||||||||||||||| |||||| |||||||||||||||||||| | || || || ||||||||||||||||||||  |||| ||||    
T  23777553 tattaccttcgttcctttttaattgtcactttttgacattttacacaaaccaagacattaaataaatgttactacttttgatacaataatatatactttt 23777454  T
Q  271 actat 275  Q
    |||||    
T  23777453 actat 23777449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 177 - 252
Target Start/End: Complemental strand, 53882 - 53807
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgat 252  Q
    ||||||| ||||||||||||||||||||||||||||||| | |||||||||||||| ||||| |||||||||||||    
T  53882 ctccgtttctttttaattgtcacattttgatattttacatataccaagacaatcaataattgttactacttttgat 53807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 181 - 275
Target Start/End: Original strand, 26485679 - 26485773
Alignment:
Q  181 gttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||||||||||| |||||| |||||||| ||||||||||| |||| || || ||||||||||||||||||||  |||| |||||||||    
T  26485679 gttcctttttaattgtcactttttgacattttacataaaccaagacattcaataaatgttactacttttgatacaataatatatacttttactat 26485773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 178 - 275
Target Start/End: Original strand, 22784659 - 22784756
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||| |||| | |||||||| ||||||||| | |||| || |||||||||||||||||||||||  |||| |||||||||    
T  22784659 tccgttcctttttaattgtcactttttaacattttacataaaccaagatattcaataaatgatactacttttgatacaataatgtatacttttactat 22784756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 177 - 257
Target Start/End: Complemental strand, 24949358 - 24949278
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaat 257  Q
    |||||||||||||||||||| |  ||||||||||||||||||||||| |||||||| || || ||||||||||||||||||    
T  24949358 ctccgttcctttttaattgttattttttgatattttacacaaaccaaaacaatcaataaatgttactacttttgatacaat 24949278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 181 - 275
Target Start/End: Complemental strand, 8176680 - 8176586
Alignment:
Q  181 gttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||| |||||||||||||| |||| | |||||||||||| |||||||||||| ||||| | ||||||||||| ||||||| |||| |||||||||    
T  8176680 gttcttttttaattgtcactttttaacattttacacaaatcaagacaatcaataattgtttctacttttgatgcaataagttatacttttactat 8176586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 177 - 257
Target Start/End: Original strand, 17251245 - 17251326
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaa-caattgatactacttttgatacaat 257  Q
    ||||||||||||||||||||||| |||| | |||||||||||||||||||||||||  || || ||||||||||||||||||    
T  17251245 ctccgttcctttttaattgtcactttttaacattttacacaaaccaagacaatcaattaagtgttactacttttgatacaat 17251326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 181 - 257
Target Start/End: Complemental strand, 11129078 - 11129002
Alignment:
Q  181 gttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaat 257  Q
    ||||||||||||||||||| |||||| |||||||||||| ||||||||| || || || ||||||||||||||||||    
T  11129078 gttcctttttaattgtcactttttgacattttacacaaatcaagacaattaataaatgttactacttttgatacaat 11129002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 177 - 257
Target Start/End: Original strand, 11676605 - 11676685
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaat 257  Q
    |||| ||| ||||||||||| || |||||||||||||||||||||||||||||||| || |  ||||||||||||||||||    
T  11676605 ctccattcatttttaattgttactttttgatattttacacaaaccaagacaatcaataaatattactacttttgatacaat 11676685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 185 - 269
Target Start/End: Original strand, 17601131 - 17601215
Alignment:
Q  185 ctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttt 269  Q
    ||||||||||||||||||||||  |||||||||||| ||||||||||| || || | ||||||||||||||||||  ||||||||    
T  17601131 ctttttaattgtcacattttgacgttttacacaaactaagacaatcaataaatgttgctacttttgatacaataatttatatttt 17601215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 180 - 275
Target Start/End: Complemental strand, 1249787 - 1249692
Alignment:
Q  180 cgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||| || |||||||||| | |||| ||||||||||| || || ||||| ||||||||||||||   |||||||||||||    
T  1249787 cgttcctttttaattgtcactttatgatattttatataaactaagacaatcaataaatgttactatttttgatacaataattgatatttttactat 1249692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 181 - 259
Target Start/End: Original strand, 9838116 - 9838194
Alignment:
Q  181 gttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataa 259  Q
    ||||||||||||||||||  || |||||||||||||||| ||| |||||||| || || ||||||||||||||||||||    
T  9838116 gttcctttttaattgtcattttgtgatattttacacaaatcaaaacaatcaataaatgttactacttttgatacaataa 9838194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 34730810 - 34730713
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||| |||  ||||||||||||| ||||||||||||| ||||  | || ||||||||||||||||| ||  ||||||||||||||    
T  34730810 ctccgttcctttttaattatcat-ttttgatattttatacaaaccaagacattcaatgaatgttactacttttgatacaacaatgtatatttttactat 34730713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 254
Target Start/End: Original strand, 24356045 - 24356121
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatac 254  Q
    |||||| ||||||||||||||| |||||||||||||  |||||||| |||||||| || || |||||||||||||||    
T  24356045 tccgtttctttttaattgtcactttttgatattttatccaaaccaaaacaatcaataaatgttactacttttgatac 24356121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 178 - 253
Target Start/End: Original strand, 19645713 - 19645788
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgata 253  Q
    ||||||| |||||||||||||| |||||| ||||||||||||| ||||||||||| |  || ||||||||||||||    
T  19645713 tccgttcttttttaattgtcactttttgacattttacacaaactaagacaatcaatagatgttactacttttgata 19645788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 34379110 - 34379055
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaa 232  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||    
T  34379110 ctccgttcctttttaactgtcactttttgatattttacacaaaccaagacactcaa 34379055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 7056130 - 7056228
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||| |||||||||||||||| |||||| |||||||||||| ||||| |||||| ||||  |  |||||||||| ||||||| |||  |||||||||    
T  7056130 ctccgtacctttttaattgtcactttttgacattttacacaaatcaagataatcaataattatttttacttttgatgcaataagttattcttttactat 7056228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 34607349 - 34607251
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||| |  |||||| |||||| ||||||||||||| ||||  | || ||||||||||||||||| ||  |||| |||||||||    
T  34607349 ctccgttcctttttaattgttaatttttgacattttatacaaaccaagacattcaatgaatgttactacttttgatacaacaatgtatacttttactat 34607251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 275
Target Start/End: Original strand, 7632030 - 7632125
Alignment:
Q  180 cgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||||||  |||| |||||| |||||| | ||| |||||||||||| ||||  ||||| ||||||| ||||||| |||| |||||||||    
T  7632030 cgttcctttttaataatcactttttgacattttatataaatcaagacaatcaataattattactatttttgatgcaataagttatacttttactat 7632125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 257
Target Start/End: Complemental strand, 7170400 - 7170323
Alignment:
Q  180 cgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaat 257  Q
    |||||||||||||||| ||  ||||  |||||||||||||  ||||||||||| || || ||||||||||||||||||    
T  7170400 cgttcctttttaattgccattttttagtattttacacaaattaagacaatcaataaatgttactacttttgatacaat 7170323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 33260956 - 33260901
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaa 232  Q
    |||||||||||| ||| |||||| |||||| |||||||||||||||||| ||||||    
T  33260956 ctccgttcctttataactgtcactttttgacattttacacaaaccaagataatcaa 33260901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 228
Target Start/End: Original strand, 11000809 - 11000851
Alignment:
Q  186 tttttaattgtcacattttgatattttacacaaaccaagacaa 228  Q
    |||||||||||||||||||||| |||||||||||| |||||||    
T  11000809 tttttaattgtcacattttgattttttacacaaactaagacaa 11000851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 272
Target Start/End: Original strand, 11431140 - 11431242
Alignment:
Q  170 atattaactccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttt 269  Q
    |||||| ||| ||| | |||||||||||||||||| | || ||||||||| |||||||||||| |  |  | ||||||||||||||||||  |||| |||    
T  11431140 atattacctctgtttcgttttaattgtcacatttttacatgttacacaaatcaagacaatcaatagctattcctacttttgatacaataacttatacttt 11431239  T
Q  270 tac 272  Q
    |||    
T  11431240 tac 11431242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 228
Target Start/End: Original strand, 32250941 - 32250993
Alignment:
Q  176 actccgttcctttttaattgtcacattttgatattttacacaaaccaagacaa 228  Q
    |||| ||| |||||||||| |||||||||||  ||||||||||||||||||||    
T  32250941 actctgtttctttttaattatcacattttgactttttacacaaaccaagacaa 32250993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 253
Target Start/End: Original strand, 22400554 - 22400630
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgata 253  Q
    |||||||| | ||||| |||||| ||  || |||||||||||||||| ||| |||| || || ||||||||||||||    
T  22400554 ctccgttcttgtttaagtgtcactttaagacattttacacaaaccaatacattcaataaatgttactacttttgata 22400630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 83; Significance: 2e-39; HSPs: 80)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 790801 - 790703
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  790801 ctccgttcctttttaatgatcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagctatacttttactat 790703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 178 - 275
Target Start/End: Original strand, 53745278 - 53745375
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||    
T  53745278 tccgttcctttttaattgtcacattttgacattttacacaaaccaagataatcaacaattgatactacttttgatgcaataagctatacttttactat 53745375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 179 - 275
Target Start/End: Complemental strand, 19550495 - 19550399
Alignment:
Q  179 ccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  19550495 ccgttcctttttaattgtcacattttgacattttacacaaactaagacaatcaacaattgatattacttttgatgcaataagctatatttttactat 19550399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 34266435 - 34266533
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |||||||||    
T  34266435 ctccgttcctttttaatcgtcacattttgacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagttatacttttactat 34266533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 170 - 275
Target Start/End: Complemental strand, 27992498 - 27992393
Alignment:
Q  170 atattaactccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttt 269  Q
    |||||| ||| |||||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||||| |||||||||||| |||    
T  27992498 atattacctctgttcctttttaattgtcacattttgacattttacacaacccaatacaatcaacaattgatactacttttgatgcaataagctatacttt 27992399  T
Q  270 tactat 275  Q
    ||||||    
T  27992398 tactat 27992393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 178 - 275
Target Start/End: Original strand, 47069853 - 47069950
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |||||||||    
T  47069853 tccgtttctttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagttatacttttactat 47069950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 29698242 - 29698144
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||| ||||||| |||||||||||| |||||||||    
T  29698242 ctccgttcctttttaattgtcacattttgacattttacacaaattaagacaatcaacaattgatactatttttgatgcaataagctatacttttactat 29698144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 29803899 - 29803801
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||| ||||||| |||| |||||||||    
T  29803899 ctccgttcctttttaattgtcacattttgatattttacacgaaccaagacaatcaacaattgatactattattgatgcaataagttatacttttactat 29803801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 43554640 - 43554542
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||  |||||||||| |||||||||||| |||||||||    
T  43554640 ctccgttactttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatcatacttttgatgcaataagctatacttttactat 43554542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 170 - 275
Target Start/End: Complemental strand, 6902536 - 6902431
Alignment:
Q  170 atattaactccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttt 269  Q
    |||||| | ||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| |||||||||||| |||    
T  6902536 atattatccccgtttctttttaactgtcacattttgatattttacacaaaccaagaccatcaacaattgatactacatttgatgcaataagctataattt 6902437  T
Q  270 tactat 275  Q
    ||||||    
T  6902436 tactat 6902431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 182 - 271
Target Start/End: Original strand, 54898086 - 54898175
Alignment:
Q  182 ttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatattttta 271  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  54898086 ttcctttttaattgtcacattttgacattttacataaaccaagacaatcaacaattgatactacttttgatgcaataagctatactttta 54898175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 167 - 271
Target Start/End: Complemental strand, 51244885 - 51244781
Alignment:
Q  167 aatatattaactccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatat 266  Q
    ||||||||| ||||||| ||||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||    
T  51244885 aatatattacctccgtttctttttacttgtaatattttgatattttacacaaaccaagacaatcaacaattgatactagttttgatgcaataagccatat 51244786  T
Q  267 tttta 271  Q
    |||||    
T  51244785 tttta 51244781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 29651919 - 29651821
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||| ||||||||||||||||||| | |||||||||||||||| |||||||||| ||||||||||||||||| |||||||||||| |||||||||    
T  29651919 ctccgttcttttttaattgtcacatttttacattttacacaaaccaaaacaatcaacagttgatactacttttgatgcaataagctatacttttactat 29651821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 45101353 - 45101451
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||| ||||||||||| |||||||||||| |||| ||||    
T  45101353 ctccgttcctttttaattgtcacattttgacattttacacaaaccaagacaatcaacagctgatgctacttttgatgcaataagctatacttttcctat 45101451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 54106514 - 54106416
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||||||| |||||||||| |||||| ||||| |||||||||    
T  54106514 ctccgttcctttttaattgttacattttgacattttacataaaccaagacaatcaacaattgatattacttttgatgcaataaactatacttttactat 54106416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 168 - 271
Target Start/End: Complemental strand, 46973683 - 46973580
Alignment:
Q  168 atatattaactccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatt 267  Q
    ||||||||  |||||| |||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||| |||| |    
T  46973683 atatattatatccgtttctttttaattgttacattttgatattttacacaaaccaaagcaatcaacaattgatactacttttgatgcaataagttatact 46973584  T
Q  268 ttta 271  Q
    ||||    
T  46973583 ttta 46973580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 51219088 - 51219189
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaat---caacaattgatactacttttgatacaataagctatatttttact 273  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||||   ||||||||||||||||||||||| ||||||| |||| |||||||    
T  51219088 ctccgttcctttttaattgtcacatattgacattttacacaaaccaagacaatcaacaacaattgatactacttttgatgcaataagttatacttttact 51219187  T
Q  274 at 275  Q
    ||    
T  51219188 at 51219189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 52663693 - 52663595
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||| ||||||||||||| ||||||| |||| |||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||| ||||    
T  52663693 ctccgttcatttttaattgtcatattttgacatttcacacaaaccaagacaatcaataattgatactacttttgatgcaataagctatacttttgctat 52663595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 178 - 275
Target Start/End: Complemental strand, 24981540 - 24981443
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||| ||||||||||||||||||||| ||||| ||||||| |||| |||||||||||||||||||||||||| |||||| ||||| |||||||||    
T  24981540 tccgttcttttttaattgtcacattttgacattttgcacaaactaagataatcaacaattgatactacttttgatgcaataaactatacttttactat 24981443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 174 - 271
Target Start/End: Complemental strand, 35315386 - 35315289
Alignment:
Q  174 taactccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatattttta 271  Q
    |||||||||||||||||||||||||  |||||| |||||||||||| |||||||||||||||||| ||||||||||||| ||||||| |||| |||||    
T  35315386 taactccgttcctttttaattgtcattttttgacattttacacaaatcaagacaatcaacaattgttactacttttgatgcaataagttatactttta 35315289  T

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Target: chr3; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 178 - 265
Target Start/End: Complemental strand, 41169008 - 41168918
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatac---tacttttgatacaataagctata 265  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||   |||||||||| ||||||||||||    
T  41169008 tccgttcttttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactactacttttgatgcaataagctata 41168918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 177 - 273
Target Start/End: Complemental strand, 43945630 - 43945534
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttact 273  Q
    ||||||||||||||| |||||||||||||| |||||| | |||||||||||||||||||||||||||| ||||||| |||||| ||||| |||||||    
T  43945630 ctccgttcctttttagttgtcacattttgacattttatataaaccaagacaatcaacaattgatactatttttgatgcaataaactatacttttact 43945534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 13158434 - 13158532
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||| | ||||||| |||||||| ||||||||||||| || |||||||||||||||||||| |||||| |||| |||||||||    
T  13158434 ctccgttcctttttaattgttatattttgacattttacataaaccaagacaataaaaaattgatactacttttgatataataagttatacttttactat 13158532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 181 - 275
Target Start/End: Original strand, 27483787 - 27483881
Alignment:
Q  181 gttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||| ||||| | |||||| ||||| || ||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  27483787 gttcctttttaattgtcatattttaacattttatacaaatcaggacaatcaacaattgatactacttttgatgcaataagttatatttttactat 27483881  T

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Target: chr3; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 181 - 271
Target Start/End: Complemental strand, 32980887 - 32980797
Alignment:
Q  181 gttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatattttta 271  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| || |||||||||| ||||||| |||| |||||    
T  32980887 gttcctttttaattgtcacattttgacattttacacaaaccaagacaatcaataattgttaatacttttgatgcaataagttatactttta 32980797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 42671885 - 42671983
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||| ||||||||||||||||||||| |||||| | |||| |||||||||||||||||||| |||||||||| |||||| ||||| |||||||||    
T  42671885 ctccgttcttttttaattgtcacattttgacattttatataaactaagacaatcaacaattgatattacttttgatgcaataaactatacttttactat 42671983  T

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Target: chr3; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 190 - 275
Target Start/End: Original strand, 51697571 - 51697657
Alignment:
Q  190 taattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctata-tttttactat 275  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||    
T  51697571 taattgtcatattttgacattttacacaaaccaagacaatcaacaattgatactatttttgatgcaataagctatactttttactat 51697657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 178 - 273
Target Start/End: Complemental strand, 36234614 - 36234522
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttact 273  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||||||||||| || |||   ||||||||||||||||||||||| |||||||    
T  36234614 tccgttcctttttaattgtcacattttgatattttacacaaattaagacaatcaaaaagtga---tacttttgatacaataagctatacttttact 36234522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 177 - 273
Target Start/End: Complemental strand, 41425880 - 41425784
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttact 273  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||||||||| || || | ||||||||||||||||||  | ||||||||||    
T  41425880 ctccgttcctttttaattgtcacattttaacattttacacaaaccaagacaatcaataaatgttgctacttttgatacaataatttctatttttact 41425784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 180 - 275
Target Start/End: Original strand, 33074276 - 33074371
Alignment:
Q  180 cgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||||||| || || | ||||||||||||||||||  | ||||||||||||    
T  33074276 cgttcctttttatttgtcacattttgacattttacacaaaccaagacaatcaataaatgctgctacttttgatacaataatttttatttttactat 33074371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 178 - 245
Target Start/End: Original strand, 45513314 - 45513381
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactac 245  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||||    
T  45513314 tccgttcctttttaattgtcatattttgatattttacacaaatcaaaacaatcaacaattgatactac 45513381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 181 - 275
Target Start/End: Original strand, 29458202 - 29458296
Alignment:
Q  181 gttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||| |||||||| |||||||||||| ||||||||||||||||||||||||| || || | ||||||||||||||||||  | ||||||||||||    
T  29458202 gttcatttttaatcgtcacattttgacattttacacaaaccaagacaatcaataaatgttgctacttttgatacaataatttctatttttactat 29458296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 33491134 - 33491232
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||||||||||| |||||||| |||| |||| | ||||  |||| ||||||||||||| ||||||| |||| |||||||||    
T  33491134 ctccgttcctttttaattgtcacattttgacattttacataaactaagatagtcaatgattgttactacttttgatgcaataagttatacttttactat 33491232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 167 - 273
Target Start/End: Original strand, 40318913 - 40319019
Alignment:
Q  167 aatatattaactccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatat 266  Q
    |||||| || |||||||| ||||||||||||||||||| | |||||||||||||||||| |||||| || || | ||||||||||||||||||  | |||    
T  40318913 aatatactacctccgttcatttttaattgtcacattttaacattttacacaaaccaagataatcaataaatgttgctacttttgatacaataatttctat 40319012  T
Q  267 ttttact 273  Q
    |||||||    
T  40319013 ttttact 40319019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 45145379 - 45145281
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||| |||||||||||||||||  |||||||||||||||||||||||||||||||| ||||  || |||||||| | ||||||| |||| |||||||||    
T  45145379 ctcctttcctttttaattgtcattttttgatattttacacaaaccaagacaatcaataattattattacttttgctgcaataagttatacttttactat 45145281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 52627233 - 52627331
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||||||||||| ||||| | || ||||||| ||| ||| ||||||| |||||||||| ||||||| |||| |||||||||    
T  52627233 ctccgttcctttttaattgtcacattttgacattttcctcataccaagataattaacgattgatattacttttgatgcaataagttatacttttactat 52627331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 177 - 257
Target Start/End: Original strand, 20848719 - 20848799
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaat 257  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||| | |||||| || || ||||||||||||||||||    
T  20848719 ctccgttcctttttaactgtcacattttgacattttacacaaaccaaaataatcaataaatgttactacttttgatacaat 20848799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 177 - 257
Target Start/End: Original strand, 33874541 - 33874621
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaat 257  Q
    ||||||||||||||||||||||  |||||| |||||||||||||||| |||||||| || || ||||||||||||||||||    
T  33874541 ctccgttcctttttaattgtcattttttgacattttacacaaaccaaaacaatcaataaatgttactacttttgatacaat 33874621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 177 - 259
Target Start/End: Original strand, 2858572 - 2858654
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataa 259  Q
    |||||||||||||||||||||||||||| | |||||||||| |||||||||||||| ||  | | ||||||||||||||||||    
T  2858572 ctccgttcctttttaattgtcacattttaacattttacacagaccaagacaatcaataaaggttgctacttttgatacaataa 2858654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 13168255 - 13168193
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgat 240  Q
    ||||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||    
T  13168255 tccgttcctttttaattgtcacatttttacattttatacaaaccaagacaatcaacaattgat 13168193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 185 - 275
Target Start/End: Original strand, 39866852 - 39866942
Alignment:
Q  185 ctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||| ||||| |  |||||||||| ||||||| |||  |||||||||    
T  39866852 ctttttaattgtcactttttgacattttacacaaaccaagacaatcaataattgtttttacttttgatgcaataagttatgcttttactat 39866942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 43775385 - 43775483
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||| ||||||||||| |||||||| ||||||||| | ||||  |||| ||||||||||||| ||||||| | || |||||||||    
T  43775385 ctccgttcctttttaattttcacattttgacattttacataaaccaagatagtcaatgattgttactacttttgatgcaataagttgtacttttactat 43775483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 40139837 - 40139927
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||||||||||        ||||||||||||||||||||| ||||| ||||||||||||| ||||||| |||| |||||||||    
T  40139837 ctccgttcctttttaattgtcacattt--------tacacaaaccaagacaatcaataattgttactacttttgatgcaataagttatacttttactat 40139927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 181 - 277
Target Start/End: Complemental strand, 41926927 - 41926829
Alignment:
Q  181 gttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattg---atactacttttgatacaataagctatatttttactatga 277  Q
    ||||||||||||||||||| |||| | ||||||||||||||||||||||||| |||||    ||||||||||||| ||||||| |||| |||||||||||    
T  41926927 gttcctttttaattgtcacttttt-acattttacacaaaccaagacaatcaataattgttactactacttttgatgcaataagttatacttttactatga 41926829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 177 - 257
Target Start/End: Original strand, 32853355 - 32853435
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaat 257  Q
    |||| ||||||||||||||| || |||||| ||||||||||||| ||||||||||| || || ||||||||||||||||||    
T  32853355 ctccattcctttttaattgtaactttttgacattttacacaaactaagacaatcaataaatgttactacttttgatacaat 32853435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 257
Target Start/End: Complemental strand, 52175969 - 52175891
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaat 257  Q
    ||||||||||||||||| | ||||||||| |||||||||||||||||||||| ||||| || || |||||||||||||||    
T  52175969 tccgttcctttttaattatgacattttgacattttacacaaaccaagacaattaacaa-tgttattacttttgatacaat 52175891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 41351189 - 41351287
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||||||||||||||| || |||||||||||| ||| ||||||| ||||  | || |||||||||||||| |||||  |||| |||||||||    
T  41351189 ctccgttcctttttaattgtcactttctgatattttacataaatcaagacattcaattaatgttactacttttgatataataatatatacttttactat 41351287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 177 - 265
Target Start/End: Complemental strand, 49123773 - 49123688
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctata 265  Q
    ||||||||||||||||| |||||||||||| |||||||||||| ||||| |||   ||||||||||||| |||||| |||||| |||||    
T  49123773 ctccgttcctttttaatagtcacattttgacattttacacaaatcaagataat---caattgatactacatttgatgcaataaactata 49123688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 183 - 257
Target Start/End: Complemental strand, 51065128 - 51065054
Alignment:
Q  183 tcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaat 257  Q
    |||||||||||| |||| |||| | ||||||||||||||||||||||||| || || ||||||||||||||||||    
T  51065128 tcctttttaattatcactttttaacattttacacaaaccaagacaatcaataaatgttactacttttgatacaat 51065054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 178 - 275
Target Start/End: Complemental strand, 45055437 - 45055340
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||| |||||||||||||  |||| |||||||||| ||| |||||||||||| ||||  |  |||||||||||||||||| |||| |||||||||    
T  45055437 tccgttcttttttaattgtcaatttttaatattttacataaatcaagacaatcaataattatttttacttttgatacaataagttatacttttactat 45055340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 48214302 - 48214225
Alignment:
Q  181 gttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaata 258  Q
    ||||||||||||||||||| |||||| |||||||||| ||||| |||||||| || |  |||||||||||||||||||    
T  48214302 gttcctttttaattgtcactttttgacattttacacacaccaatacaatcaataaatattactacttttgatacaata 48214225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 177 - 257
Target Start/End: Original strand, 3643191 - 3643271
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaat 257  Q
    |||| ||||||||||| |||||| |||||| |||||||||||| ||| |||||||| || || ||||||||||||||||||    
T  3643191 ctccattcctttttaagtgtcactttttgacattttacacaaatcaatacaatcaagaaatgttactacttttgatacaat 3643271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 185 - 248
Target Start/End: Complemental strand, 7329067 - 7329004
Alignment:
Q  185 ctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttt 248  Q
    |||||||||||||||||||| | ||||||||||||| ||||||||||| ||||| |||||||||    
T  7329067 ctttttaattgtcacattttaacattttacacaaactaagacaatcaataattgttactacttt 7329004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 168 - 258
Target Start/End: Complemental strand, 48152245 - 48152155
Alignment:
Q  168 atatattaactccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaata 258  Q
    ||||| || ||||||||||||||||||||||  |||| |||||||||||||| ||| |||||||| || |  || ||||||||||||||||    
T  48152245 atatagtatctccgttcctttttaattgtcatttttttatattttacacaaatcaatacaatcaataaatattattacttttgatacaata 48152155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 275
Target Start/End: Original strand, 54911305 - 54911394
Alignment:
Q  185 ctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||| | |||||||| | |  ||||||||||| ||||| ||||||||||||| ||||||| |||| |||||||||    
T  54911305 ctttttaattgtcacattttaaaattttacatatat-aagacaatcaataattgttactacttttgatgcaataagttatacttttactat 54911394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 257
Target Start/End: Original strand, 42515170 - 42515247
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaat 257  Q
    ||||||||||||||||||| || |||| | ||||||||||||||||||||||||| ||  | ||||| ||||||||||||    
T  42515170 tccgttcctttttaattgtaactttttaacattttacacaaaccaagacaatcaataa--gttactatttttgatacaat 42515247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 40010659 - 40010714
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaa 232  Q
    |||||||||||||||| ||| || ||||||||||||||||||||||||||| ||||    
T  40010659 ctccgttcctttttaagtgttactttttgatattttacacaaaccaagacactcaa 40010714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 229
Target Start/End: Complemental strand, 52173995 - 52173945
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagacaat 229  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  52173995 tccgttcctttttaattgtcactttttgata-tttacacaaaccaagacaat 52173945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 260
Target Start/End: Complemental strand, 20105424 - 20105349
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataag 260  Q
    ||||||||||||||||||||||||||||        ||| ||| |||||||||||||||||||||| ||||||||| |||||||    
T  20105424 ctccgttcctttttaattgtcacatttt--------acataaatcaagacaatcaacaattgataccacttttgatgcaataag 20105349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 28226666 - 28226620
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaag 224  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||    
T  28226666 tccgttcctttttaattgtcacattttgactttttacacaaaccaag 28226620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 186 - 260
Target Start/End: Complemental strand, 28885919 - 28885845
Alignment:
Q  186 tttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataag 260  Q
    ||||||||||||||||||| | |||||||| ||||||||| | ||||  |||| ||||||||||||| |||||||    
T  28885919 tttttaattgtcacattttaacattttacataaaccaagatagtcaattattgttactacttttgatgcaataag 28885845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 227
Target Start/End: Original strand, 53290756 - 53290806
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagaca 227  Q
    |||||||||||||||||||||| |||||||| |||||||||||||| ||||    
T  53290756 ctccgttcctttttaattgtcatattttgattttttacacaaaccatgaca 53290806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 275
Target Start/End: Original strand, 24064 - 24157
Alignment:
Q  182 ttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||| |||||| || ||| |||||||| ||||||||||| | || || |  ||||||||||||||||||||  |||| |||||||||    
T  24064 ttcctttttaagtgtcactttgtgacattttacataaaccaagacatttaataaatattactacttttgatacaataatatatacttttactat 24157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 259
Target Start/End: Original strand, 3114390 - 3114466
Alignment:
Q  182 ttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataa 259  Q
    |||||||||||||||||| |||| ||||||||| |||||||| |||||||  || || |||||||||| |||||||||    
T  3114390 ttcctttttaattgtcactttttaatattttactcaaaccaa-acaatcagtaaatgttactacttttaatacaataa 3114466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 253
Target Start/End: Original strand, 47104149 - 47104226
Alignment:
Q  176 actccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgata 253  Q
    |||||||||||||||||||| ||| |||||| |||||||| ||| ||| |||||||| || || ||||| ||||||||    
T  47104149 actccgttcctttttaattgccactttttgacattttacataaatcaaaacaatcaataaatgttactatttttgata 47104226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 177 - 256
Target Start/End: Complemental strand, 2642953 - 2642874
Alignment:
Q  177 ctccgttcctttttaattgtcacattttga-tattttacacaaaccaagacaatcaacaattgatactacttttgatacaa 256  Q
    ||||||||||||||||||||||| |||||| | ||||||||||||||||||||  || | ||  |||||||||||||||||    
T  2642953 ctccgttcctttttaattgtcac-ttttgagttttttacacaaaccaagacaacaaatactttttactacttttgatacaa 2642874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 232
Target Start/End: Original strand, 31610080 - 31610136
Alignment:
Q  176 actccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaa 232  Q
    ||||||||| ||| |||||||||| ||||||||||||||| ||| ||||||||||||    
T  31610080 actccgttcttttataattgtcactttttgatattttacataaatcaagacaatcaa 31610136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 227
Target Start/End: Original strand, 35458490 - 35458549
Alignment:
Q  168 atatattaactccgttcctttttaattgtcacattttgatattttacacaaaccaagaca 227  Q
    ||||| || ||||||| |||||||||||||||||||| |  |||||||||||||||||||    
T  35458490 atatactacctccgtttctttttaattgtcacattttaactttttacacaaaccaagaca 35458549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 275
Target Start/End: Complemental strand, 11473649 - 11473555
Alignment:
Q  181 gttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||||||||| | |||||| ||||||||||||| |||||| |||| || || ||||  || | |||||||||  |||| |||||||||    
T  11473649 gttcctttttaattgtcgctttttgacattttacacaaactaagacattcaataaatgttactttttcttatacaataatttatacttttactat 11473555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 275
Target Start/End: Original strand, 25983662 - 25983755
Alignment:
Q  181 gttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||| |||||||||||||  |||||| ||||||||||||  |||| |||| ||||||| ||||| |||||||  |||||| |||| |||||||||    
T  25983662 gttcttttttaattgtcagtttttgacattttacacaaattaagataatctacaattgttactatttttgat-gaataagttatacttttactat 25983755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 227
Target Start/End: Original strand, 30861539 - 30861589
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagaca 227  Q
    ||||||||||||||||   |||| |||||||||||||||||||||||||||    
T  30861539 ctccgttcctttttaacgttcactttttgatattttacacaaaccaagaca 30861589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 227
Target Start/End: Complemental strand, 35077634 - 35077588
Alignment:
Q  181 gttcctttttaattgtcacattttgatattttacacaaaccaagaca 227  Q
    |||||||||||||||||| |||||||  |||||||||||||||||||    
T  35077634 gttcctttttaattgtcatattttgactttttacacaaaccaagaca 35077588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 232
Target Start/End: Original strand, 44543727 - 44543781
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaa 232  Q
    |||||| ||||||||||||||  |||||| |||||||||||||||||| ||||||    
T  44543727 tccgttactttttaattgtcattttttgacattttacacaaaccaagataatcaa 44543781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 227
Target Start/End: Original strand, 47843842 - 47843888
Alignment:
Q  181 gttcctttttaattgtcacattttgatattttacacaaaccaagaca 227  Q
    ||||||||||||||||||||||||||| ||||||| ||| |||||||    
T  47843842 gttcctttttaattgtcacattttgattttttacataaatcaagaca 47843888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 227
Target Start/End: Complemental strand, 50092196 - 50092146
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagaca 227  Q
    |||||||||||||||| |||| | |||||| ||||||||||||||||||||    
T  50092196 ctccgttcctttttaactgtcgctttttgacattttacacaaaccaagaca 50092146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 275
Target Start/End: Original strand, 3376304 - 3376397
Alignment:
Q  182 ttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||  ||||||||||||| |||||||| |||| |||| ||||||  |||| ||||| |||| ||  |||||| | ||||||||||||    
T  3376304 ttcctttttatctgtcacattttgacattttacataaactaagataatcaatgattgttactattttttatgtaataagttgtatttttactat 3376397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 26748596 - 26748552
Alignment:
Q  184 cctttttaattgtcacattttgatattttacacaaaccaagacaa 228  Q
    |||||||||||||||||||||||  ||||||||||| ||||||||    
T  26748596 cctttttaattgtcacattttgactttttacacaaatcaagacaa 26748552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 232
Target Start/End: Original strand, 27039605 - 27039656
Alignment:
Q  181 gttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaa 232  Q
    ||||||||||||  ||||| |||||| |||||||||||||||||||| ||||    
T  27039605 gttcctttttaaccgtcactttttgacattttacacaaaccaagacattcaa 27039656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 215 - 273
Target Start/End: Original strand, 36370861 - 36370919
Alignment:
Q  215 acaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttact 273  Q
    |||||||||||||||||| || || | ||||||||||||||||||  | ||||||||||    
T  36370861 acaaaccaagacaatcaataaatgttgctacttttgatacaataatttctatttttact 36370919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 186 - 259
Target Start/End: Complemental strand, 17102996 - 17102923
Alignment:
Q  186 tttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataa 259  Q
    ||||||||||| |  |||||| ||||||||||||  || ||||| || ||||| ||||||||||||| ||||||    
T  17102996 tttttaattgttattttttgacattttacacaaattaaaacaattaataattgttactacttttgatgcaataa 17102923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 74; Significance: 5e-34; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 178 - 271
Target Start/End: Complemental strand, 49396 - 49303
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatattttta 271  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||    
T  49396 tccgttcctttttaattgtcacattttgacattttacgcaaaccaagacaatcaacaattgatactacttttgatgcaataaactatactttta 49303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 89418 - 89360
Alignment:
Q  180 cgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattg 238  Q
    ||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  89418 cgttcttttttaattgtcacattttgacattttacacaaatcaagacaatcaacaattg 89360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 168 - 275
Target Start/End: Complemental strand, 69359 - 69253
Alignment:
Q  168 atatattaactccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatt 267  Q
    ||||| || ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||||||| |||||||||||| |    
T  69359 atatactacctccgttccttttcaattgtcacattttgacattttacacaaaccaagacaatcaacaatt-atactatttttgatgcaataagctatact 69261  T
Q  268 tttactat 275  Q
    ||||||||    
T  69260 tttactat 69253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 77339 - 77241
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||| |||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||| |||||||||    
T  77339 ctccgttccttcttaattgtcacattttaacattttacacaaatcaagacaatcaacaattgatactacttttgatgcaataaactatacttttactat 77241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0886 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold0886
Description:

Target: scaffold0886; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 4765 - 4668
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||||||||||||||||||||||| | ||||||||| |||||||||||||||| ||||| ||||||||||||| ||||||| ||||||||||||||    
T  4765 ctccgttcctttttaattgtcacatttgg-tattttacataaaccaagacaatcaataattgttactacttttgatgcaataagttatatttttactat 4668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 178 - 275
Target Start/End: Original strand, 195578 - 195675
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||  ||||||||||||| ||||| |||||||||    
T  195578 tccgttcttttttaattgtcacattttgacattttacacaaaccaagataatcgacaattgatactatgtttgatacaataaactatacttttactat 195675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 181 - 271
Target Start/End: Original strand, 26121 - 26211
Alignment:
Q  181 gttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatattttta 271  Q
    |||| ||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||| |||||||||| |||||||||||| |||||    
T  26121 gttcgtttttaattgtcatattttgacattttacataaaccaagacaatcaacaattgatattacttttgatgcaataagctatactttta 26211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 148554 - 148456
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||||| | ||||||| |||||||| ||||||||||||| || |||||||||||||||||||| |||||| |||| |||||||||    
T  148554 ctccgttcctttttaattgttatattttgacattttacataaaccaagacaataaaaaattgatactacttttgatataataagttatacttttactat 148456  T

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Target: scaffold0002; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 138733 - 138795
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgat 240  Q
    ||||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||    
T  138733 tccgttcctttttaattgtcacatttttacattttatacaaaccaagacaatcaacaattgat 138795  T

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Target: scaffold0343 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 180 - 257
Target Start/End: Complemental strand, 7672 - 7595
Alignment:
Q  180 cgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaat 257  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||||||| || |  ||||||||||||||||||    
T  7672 cgttcctttttaattgtcactttttgatattttacacaaatcaagacaatcaataaatattactacttttgatacaat 7595  T

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Target: scaffold0831 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0831
Description:

Target: scaffold0831; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 177 - 271
Target Start/End: Complemental strand, 3060 - 2964
Alignment:
Q  177 ctccgttcctttttaattgtcacattttg-atattttacacaaaccaagacaatcaacaa-ttgatactacttttgatacaataagctatattttta 271  Q
    ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||  || ||| ||||||||||||| ||||||| |||| |||||    
T  3060 ctccgttcctttttaattgtcactttttttatattttacacaaaccaagacaatcagtaatttgttactacttttgatgcaataagttatactttta 2964  T

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Target: scaffold0009 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 177 - 257
Target Start/End: Original strand, 147117 - 147197
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaat 257  Q
    ||||||||||||||||||||||| |||||| |||||||||||| ||| ||||| || || || ||||||||||||||||||    
T  147117 ctccgttcctttttaattgtcactttttgacattttacacaaatcaaaacaattaataaatgttactacttttgatacaat 147197  T

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Target: scaffold0274 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0274
Description:

Target: scaffold0274; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 230 - 327
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||||||| |||  ||||||||||||| ||||||||||||| ||||  | || ||||||||||||||||| ||  ||||||||||||||    
T  230 ctccgttcctttttaattatcat-ttttgatattttatacaaaccaagacattcaatgaatgttactacttttgatacaacaatgtatatttttactat 327  T

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Target: scaffold0001 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 185 - 259
Target Start/End: Original strand, 419490 - 419564
Alignment:
Q  185 ctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataa 259  Q
    ||||||||||||||| || ||| |||||||| |||||||||||||||| || || ||||||||||||||||||||    
T  419490 ctttttaattgtcactttgtgacattttacataaaccaagacaatcaataaatgttactacttttgatacaataa 419564  T

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Target: scaffold0135 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 177 - 257
Target Start/End: Original strand, 30682 - 30762
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaat 257  Q
    ||||||| ||||||||||||||| |||||| |||||||||||| ||||||||| || || |  ||||||||||||||||||    
T  30682 ctccgtttctttttaattgtcactttttgaaattttacacaaaacaagacaattaataaatcttactacttttgatacaat 30762  T

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Target: scaffold0016 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 231
Target Start/End: Complemental strand, 91920 - 91867
Alignment:
Q  178 tccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatca 231  Q
    |||||||| |||||||| ||||||||| | |||||| |||||||||||||||||    
T  91920 tccgttccattttaattatcacattttaacattttaaacaaaccaagacaatca 91867  T

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Target: scaffold0471 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 1808 - 1905
Alignment:
Q  177 ctccgttccttttt-aattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactat 275  Q
    |||||||||||||| || ||||||  ||||| |||||||||||||||||||| |||| || || ||||  || | ||||||||| ||||| |||||||||    
T  1808 ctccgttccttttttaactgtcac--tttgacattttacacaaaccaagacactcaataaatgttactttttcttatacaataatctatacttttactat 1905  T

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Target: scaffold0006 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 96051 - 96102
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgata-ttttacacaaaccaagacaa 228  Q
    ||||||||||||||||||||||| |||||| | ||||||||||||||||||||    
T  96051 ctccgttcctttttaattgtcac-ttttgagatttttacacaaaccaagacaa 96102  T

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Target: scaffold0003 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 252845 - 252794
Alignment:
Q  177 ctccgttcctttttaattgtcacattttga-tattttacacaaaccaagacaa 228  Q
    ||||||||||||||||||||||| |||||| | ||||||||||||||||||||    
T  252845 ctccgttcctttttaattgtcac-ttttgagttttttacacaaaccaagacaa 252794  T

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Target: scaffold0236 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 259
Target Start/End: Original strand, 14240 - 14322
Alignment:
Q  177 ctccgttcctttttaattgtcacattttga-tattttacacaaaccaagacaatcaacaattgatactacttttgatacaataa 259  Q
    ||||||||||||||||||||||| |||||| | ||||||| ||| ||||||||  || ||||  ||||||||||||| ||||||    
T  14240 ctccgttcctttttaattgtcac-ttttgagtcttttacagaaatcaagacaacaaataatttttactacttttgatgcaataa 14322  T

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Target: scaffold2146 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold2146
Description:

Target: scaffold2146; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 259
Target Start/End: Complemental strand, 803 - 721
Alignment:
Q  177 ctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataa 259  Q
    |||||||||||||||||| |||| |||| | |||||||| ||| ||| |||||||| || |   ||||||| |||||||||||    
T  803 ctccgttcctttttaattttcactttttaacattttacataaatcaatacaatcaataaatataactacttctgatacaataa 721  T

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Target: scaffold0325 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 257
Target Start/End: Complemental strand, 562 - 486
Alignment:
Q  181 gttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaat 257  Q
    ||||||||||||||||||  |||| | |||||||  |||| ||||||||||| || |  || |||||||||||||||    
T  562 gttcctttttaattgtcattttttaacattttacgtaaactaagacaatcaataaatattattacttttgatacaat 486  T

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Target: scaffold0018 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 275
Target Start/End: Original strand, 184111 - 184215
Alignment:
Q  171 tattaactccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatacaataagctatattttt 270  Q
    ||||| |||| ||| ||||||| |||||  |||| | |||||||||||||||||||| |||| || || ||||  || | |||||||||  |||| ||||    
T  184111 tattacctcctttcttttttaagtgtcattttttaacattttacacaaaccaagacactcaataaatgttactttttcttatacaataatttatactttt 184210  T
Q  271 actat 275  Q
    |||||    
T  184211 actat 184215  T

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