View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10140A_low_197 (Length: 274)
Name: NF10140A_low_197
Description: NF10140A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10140A_low_197 |
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Alignment Details
Target: chr8 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 26457531 - 26457265
Alignment:
| Q |
1 |
tcacaactgctatgaaaacgaaaagggaagacattttaatgttaaagactagatttcagccggattttaataagtaagctgtaagcaactttattataga |
100 |
Q |
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| T |
26457531 |
tcacaactgctatgaaaacgaaaagtgaagacattttaatgttaaagactagatttcagccggatttgaataagtaagctgtaagcaactttattataga |
26457432 |
T |
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| Q |
101 |
actgtcacaatcaaatcttacttaaaatctaaaaacccaatcattgactctacaatgttgaatcatataaccagtatcttcgaatggaccaaacagaaaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26457431 |
actgtcacaatcaaatcttacttaaaatctaaaaacccaatcattgactctacaatattgaatcatataaccagtatcttcgaatggaccaaacagaaaa |
26457332 |
T |
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| Q |
201 |
caacaaagttgcacacatgtcctacataattcaatcgtactatttttatgattaagtatattcttgg |
267 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
26457331 |
caacaaagttgcacacatgtgctacataattcaatcgtactatttttatgattaagtatatttttgg |
26457265 |
T |
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