View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10140A_low_21 (Length: 439)
Name: NF10140A_low_21
Description: NF10140A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10140A_low_21 |
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Alignment Details
Target: chr3 (Bit Score: 421; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 421; E-Value: 0
Query Start/End: Original strand, 1 - 425
Target Start/End: Original strand, 21434545 - 21434969
Alignment:
| Q |
1 |
tcaatatcagaaaagataattggtttcaagtcctaacatgaaaaccttgggaaataaaaatcctatagattagggatattttttatgttgaaaactgttg |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
21434545 |
tcaatatcagaaaagataattggtttcaagtcctaacatgaaaaccttgggaaataaaaatcatatagattagggatattttttatgttgaaaactgttg |
21434644 |
T |
|
| Q |
101 |
tctgaacaatacccaagtgctaccccctttgatgaatcaaaatgaagatgatcaagtaacgtgaaagggaaatttttgagataagagacaataacaagca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21434645 |
tctgaacaatacccaagtgctaccccctttgatgaatcaaaatgaagatgatcaagtaacgtgaaagggaaatttttgagataagagacaataacaagca |
21434744 |
T |
|
| Q |
201 |
aaaatctaaagggttgctcctcaatttctataaggcaaattgtgatgcaaaccttcacatggaaggtcactggggtcttagtacagtgatattagggttg |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21434745 |
aaaatctaaagggttgctcctcaatttctataaggcaaattgtgatgcaaaccttcacatggaaggtcactggggtcttagtacagtgatattagggttg |
21434844 |
T |
|
| Q |
301 |
caagtagaaatgtggttgctgcggaaaattggaaaaccaaaggaacggaagatgcaacaatggcagaagctcaagtattgaatcgctcgtttgatcttgc |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21434845 |
caagtagaaatgtggttgctgcggaaaattggaaaaccaaaggaacggaagatgcaacaatggcagaagctcaagtattgaatcgctcgtttgatcttgc |
21434944 |
T |
|
| Q |
401 |
gcatgccttttgcttcaaatctata |
425 |
Q |
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||||||||||||||||||||||||| |
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| T |
21434945 |
gcatgccttttgcttcaaatctata |
21434969 |
T |
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