View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10140A_low_224 (Length: 261)

Name: NF10140A_low_224
Description: NF10140A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10140A_low_224
NF10140A_low_224
[»] chr7 (39 HSPs)
chr7 (75-252)||(40701707-40701886)
chr7 (119-252)||(33090974-33091106)
chr7 (119-251)||(9006688-9006820)
chr7 (119-250)||(42620963-42621095)
chr7 (119-250)||(5381961-5382093)
chr7 (119-250)||(5391599-5391731)
chr7 (119-250)||(5926919-5927051)
chr7 (119-250)||(8500833-8500965)
chr7 (119-250)||(8511303-8511435)
chr7 (119-250)||(16132060-16132192)
chr7 (119-250)||(16142609-16142741)
chr7 (119-250)||(26348295-26348427)
chr7 (119-250)||(44897101-44897233)
chr7 (119-250)||(44907504-44907636)
chr7 (119-250)||(46496898-46497030)
chr7 (119-250)||(46507510-46507642)
chr7 (148-250)||(6534290-6534392)
chr7 (148-250)||(6544589-6544691)
chr7 (148-250)||(26363360-26363462)
chr7 (148-225)||(14944116-14944193)
chr7 (148-225)||(15371709-15371786)
chr7 (146-250)||(2992089-2992193)
chr7 (119-250)||(9535386-9535518)
chr7 (119-250)||(9545669-9545801)
chr7 (119-250)||(11626510-11626642)
chr7 (119-250)||(32098164-32098296)
chr7 (119-250)||(32108601-32108733)
chr7 (119-250)||(43983261-43983393)
chr7 (146-252)||(13285967-13286073)
chr7 (146-252)||(15988851-15988957)
chr7 (131-252)||(41027324-41027446)
chr7 (146-252)||(42595137-42595243)
chr7 (150-251)||(14248719-14248820)
chr7 (146-252)||(12827541-12827647)
chr7 (146-252)||(31824502-31824608)
chr7 (146-252)||(5615678-5615784)
chr7 (1-45)||(40701916-40701960)
chr7 (150-205)||(7034931-7034986)
chr7 (146-252)||(25441868-25441974)
[»] chr8 (16 HSPs)
chr8 (78-252)||(18536373-18536547)
chr8 (117-252)||(37295658-37295792)
chr8 (119-250)||(791520-791652)
chr8 (76-224)||(37816670-37816809)
chr8 (119-250)||(9325179-9325311)
chr8 (146-250)||(17268625-17268729)
chr8 (119-250)||(21202957-21203089)
chr8 (119-250)||(21213373-21213505)
chr8 (119-250)||(21334082-21334214)
chr8 (119-250)||(21997617-21997749)
chr8 (119-250)||(21988083-21988215)
chr8 (146-252)||(5867563-5867669)
chr8 (146-252)||(14437155-14437261)
chr8 (155-209)||(7757588-7757642)
chr8 (146-252)||(26362542-26362648)
chr8 (142-251)||(2690459-2690568)
[»] scaffold0004 (1 HSPs)
scaffold0004 (109-252)||(241828-241971)
[»] chr6 (23 HSPs)
chr6 (109-252)||(9761591-9761734)
chr6 (134-250)||(14791387-14791504)
chr6 (146-250)||(27787741-27787845)
chr6 (119-230)||(28092387-28092498)
chr6 (119-250)||(12454837-12454969)
chr6 (119-250)||(20912066-20912198)
chr6 (119-250)||(18159845-18159977)
chr6 (119-250)||(18169657-18169789)
chr6 (119-210)||(29540281-29540373)
chr6 (119-250)||(31357344-31357476)
chr6 (119-250)||(31367072-31367204)
chr6 (119-210)||(3285669-3285761)
chr6 (119-250)||(16897730-16897862)
chr6 (119-250)||(16908383-16908515)
chr6 (119-250)||(18201001-18201132)
chr6 (119-210)||(24922145-24922237)
chr6 (119-210)||(24931181-24931273)
chr6 (146-252)||(22223773-22223879)
chr6 (146-252)||(22249608-22249714)
chr6 (119-210)||(14045138-14045230)
chr6 (146-252)||(8563423-8563529)
chr6 (146-252)||(34765109-34765215)
chr6 (146-201)||(24361876-24361931)
[»] chr2 (27 HSPs)
chr2 (75-252)||(40409144-40409320)
chr2 (119-250)||(24696648-24696780)
chr2 (119-250)||(2998760-2998892)
chr2 (119-250)||(9502824-9502956)
chr2 (119-250)||(9514190-9514322)
chr2 (119-250)||(18651002-18651134)
chr2 (119-250)||(18663120-18663252)
chr2 (119-250)||(38957881-38958013)
chr2 (119-250)||(45014516-45014648)
chr2 (119-250)||(45024593-45024725)
chr2 (119-249)||(17488475-17488606)
chr2 (148-250)||(4457979-4458081)
chr2 (148-250)||(4467604-4467706)
chr2 (138-251)||(72299-72412)
chr2 (119-251)||(38930545-38930678)
chr2 (119-210)||(29423189-29423281)
chr2 (148-250)||(5337228-5337330)
chr2 (148-250)||(5347081-5347183)
chr2 (121-247)||(16327799-16327924)
chr2 (119-210)||(44639089-44639180)
chr2 (121-247)||(16135297-16135422)
chr2 (131-211)||(23721734-23721815)
chr2 (146-252)||(22901866-22901972)
chr2 (146-252)||(22908966-22909072)
chr2 (146-252)||(27160114-27160220)
chr2 (146-252)||(27170483-27170589)
chr2 (146-211)||(19342104-19342169)
[»] chr1 (24 HSPs)
chr1 (146-251)||(34822808-34822913)
chr1 (119-250)||(2115784-2115916)
chr1 (119-250)||(8540035-8540167)
chr1 (119-250)||(21886097-21886229)
chr1 (119-249)||(41544255-41544386)
chr1 (119-250)||(16154667-16154799)
chr1 (146-250)||(18383145-18383249)
chr1 (119-250)||(21458412-21458544)
chr1 (119-250)||(30549750-30549882)
chr1 (134-252)||(50940946-50941063)
chr1 (146-251)||(1186593-1186698)
chr1 (119-250)||(8605274-8605406)
chr1 (119-226)||(42034003-42034111)
chr1 (131-252)||(1989655-1989777)
chr1 (148-226)||(13964703-13964781)
chr1 (148-250)||(25019252-25019354)
chr1 (146-252)||(52955471-52955577)
chr1 (146-250)||(2370580-2370684)
chr1 (131-252)||(1982237-1982359)
chr1 (146-226)||(18062393-18062473)
chr1 (146-252)||(1974887-1974993)
chr1 (134-196)||(30210869-30210931)
chr1 (146-252)||(41208309-41208415)
chr1 (144-252)||(22956337-22956445)
[»] chr4 (35 HSPs)
chr4 (75-252)||(41525639-41525815)
chr4 (146-250)||(9836240-9836344)
chr4 (146-250)||(13793240-13793344)
chr4 (119-250)||(15668971-15669103)
chr4 (119-250)||(16241845-16241977)
chr4 (148-250)||(13403219-13403321)
chr4 (148-250)||(26331009-26331111)
chr4 (119-250)||(6692002-6692134)
chr4 (119-250)||(6702408-6702540)
chr4 (119-250)||(16249230-16249362)
chr4 (119-250)||(16253196-16253328)
chr4 (119-250)||(17985017-17985149)
chr4 (119-250)||(18105568-18105700)
chr4 (119-250)||(21845887-21846019)
chr4 (119-250)||(21855479-21855611)
chr4 (119-250)||(21901750-21901882)
chr4 (119-250)||(21911342-21911474)
chr4 (119-250)||(40921627-40921759)
chr4 (148-250)||(5293271-5293373)
chr4 (148-250)||(5302930-5303032)
chr4 (148-250)||(27680934-27681036)
chr4 (148-250)||(27690589-27690691)
chr4 (148-219)||(52498946-52499017)
chr4 (119-210)||(3487775-3487867)
chr4 (119-210)||(3497098-3497190)
chr4 (146-250)||(11476705-11476809)
chr4 (119-210)||(17161062-17161154)
chr4 (146-252)||(522400-522506)
chr4 (146-252)||(17421504-17421610)
chr4 (146-252)||(26458128-26458234)
chr4 (146-252)||(30651341-30651447)
chr4 (146-219)||(6406004-6406077)
chr4 (146-210)||(19917989-19918053)
chr4 (156-211)||(16058065-16058120)
chr4 (157-250)||(14600895-14600988)
[»] chr3 (26 HSPs)
chr3 (124-250)||(21542439-21542565)
chr3 (119-250)||(55478195-55478327)
chr3 (119-250)||(12139-12271)
chr3 (119-250)||(1685403-1685535)
chr3 (119-250)||(5655778-5655910)
chr3 (119-250)||(8972630-8972762)
chr3 (119-250)||(8983185-8983317)
chr3 (119-250)||(9536919-9537051)
chr3 (119-250)||(9547245-9547377)
chr3 (119-248)||(16335593-16335723)
chr3 (119-251)||(10012379-10012512)
chr3 (120-249)||(29709441-29709569)
chr3 (119-210)||(4371201-4371293)
chr3 (119-210)||(4380920-4381012)
chr3 (119-210)||(6422126-6422218)
chr3 (119-250)||(25432643-25432775)
chr3 (148-219)||(4024574-4024645)
chr3 (148-210)||(6432566-6432628)
chr3 (146-252)||(24793231-24793337)
chr3 (146-252)||(49387556-49387662)
chr3 (146-211)||(17733933-17733998)
chr3 (146-211)||(19035202-19035267)
chr3 (119-219)||(20491869-20491970)
chr3 (146-252)||(24873440-24873546)
chr3 (146-252)||(13431653-13431759)
chr3 (205-252)||(8435840-8435887)
[»] scaffold0065 (1 HSPs)
scaffold0065 (119-246)||(15636-15764)
[»] scaffold0016 (1 HSPs)
scaffold0016 (146-250)||(13605-13709)
[»] scaffold0005 (2 HSPs)
scaffold0005 (119-250)||(310171-310303)
scaffold0005 (157-250)||(216390-216483)
[»] chr5 (20 HSPs)
chr5 (146-250)||(23378756-23378860)
chr5 (119-250)||(8765510-8765642)
chr5 (119-250)||(11411254-11411386)
chr5 (119-250)||(18361061-18361193)
chr5 (119-250)||(21753227-21753359)
chr5 (119-250)||(21762514-21762646)
chr5 (119-250)||(26192146-26192278)
chr5 (119-250)||(26202750-26202882)
chr5 (119-250)||(27411932-27412064)
chr5 (119-250)||(32070224-32070356)
chr5 (119-250)||(33939101-33939233)
chr5 (119-250)||(33949501-33949633)
chr5 (146-219)||(31105227-31105300)
chr5 (119-250)||(18390018-18390150)
chr5 (131-252)||(19548635-19548757)
chr5 (148-210)||(22244538-22244600)
chr5 (146-252)||(36316142-36316248)
chr5 (146-252)||(20947573-20947679)
chr5 (146-252)||(20957962-20958068)
chr5 (156-225)||(205879-205948)
[»] scaffold0254 (1 HSPs)
scaffold0254 (119-250)||(7995-8127)
[»] scaffold0043 (1 HSPs)
scaffold0043 (119-250)||(93005-93137)
[»] scaffold0014 (1 HSPs)
scaffold0014 (119-250)||(234141-234273)
[»] scaffold0611 (1 HSPs)
scaffold0611 (148-250)||(8154-8256)
[»] scaffold0106 (1 HSPs)
scaffold0106 (148-250)||(17469-17571)
[»] scaffold0057 (1 HSPs)
scaffold0057 (119-252)||(65468-65602)
[»] scaffold0047 (1 HSPs)
scaffold0047 (148-250)||(74900-75002)
[»] scaffold0690 (1 HSPs)
scaffold0690 (150-250)||(4395-4495)
[»] scaffold0086 (1 HSPs)
scaffold0086 (119-226)||(55972-56080)
[»] scaffold0277 (1 HSPs)
scaffold0277 (119-210)||(19528-19620)
[»] scaffold0234 (1 HSPs)
scaffold0234 (119-250)||(21308-21440)
[»] scaffold0764 (1 HSPs)
scaffold0764 (146-252)||(982-1088)
[»] scaffold0313 (2 HSPs)
scaffold0313 (146-252)||(5521-5627)
scaffold0313 (146-252)||(19678-19784)
[»] scaffold0059 (1 HSPs)
scaffold0059 (131-252)||(40758-40880)
[»] scaffold0015 (1 HSPs)
scaffold0015 (144-252)||(198871-198979)
[»] scaffold0535 (1 HSPs)
scaffold0535 (146-252)||(1102-1208)
[»] scaffold0811 (1 HSPs)
scaffold0811 (146-252)||(3713-3819)
[»] scaffold0081 (1 HSPs)
scaffold0081 (183-211)||(13145-13173)


Alignment Details
Target: chr7 (Bit Score: 149; Significance: 9e-79; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 75 - 252
Target Start/End: Complemental strand, 40701886 - 40701707
Alignment:
Q  75 caccaactgtacttgtctgt--cagatggaaaccacgtgctgaaaatgaactttctgaacttcataatgttcatttgtttctcttaggataatttgtaag 172  Q
    |||||| |||||||||||||  ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  40701886 caccaattgtacttgtctgtgtcagattgaaagcacgtgctgaaaatgaactttctgaacttcataatgttcatttgtttcacttaggataatttgtaag 40701787  T
Q  173 actaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatgatattctt 252  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  40701786 actaccatttgatgtaatcaaatcctaataatgaaacatcattgaagtgcagtgtgtataacatctagaatgatattctt 40701707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 119 - 252
Target Start/End: Complemental strand, 33091106 - 33090974
Alignment:
Q  119 tgaactttctgaacttcataatgttcatttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaa 218  Q
    ||||||||||||||| || || ||||| ||||||| |||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||   ||||    
T  33091106 tgaactttctgaact-cagaaagttcaattgtttcacttaggatgatttgtaagactctcatttgatgtaatcaaatcctaatagtgaaacattgatgaa 33091008  T
Q  219 gtgcagtgtgtataacatctagaatgatattctt 252  Q
    ||||||| | | |||||||||| |||||||||||    
T  33091007 gtgcagtatatgtaacatctaggatgatattctt 33090974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 119 - 251
Target Start/End: Complemental strand, 9006820 - 9006688
Alignment:
Q  119 tgaactttctgaacttcataatgttcatttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaa 218  Q
    ||||| |||||||| ||||||||||||| |||||| ||||| |  ||||||||||||||||||||||||||||||||||||||||||||||| || ||||    
T  9006820 tgaacattctgaacatcataatgttcatctgtttcacttagaaggatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaa 9006721  T
Q  219 gtgcagtgtgtataacatctagaatgatattct 251  Q
    | | ||||  |  ||||||||| ||||||||||    
T  9006720 gagaagtgattgcaacatctaggatgatattct 9006688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 119 - 250
Target Start/End: Complemental strand, 42621095 - 42620963
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||  | |||    
T  42621095 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacaataatga 42620996  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||  | |||||||||| |||||||||    
T  42620995 agagcagtgattttaacatctaggatgatattc 42620963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 250
Target Start/End: Original strand, 5381961 - 5382093
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  | |||    
T  5381961 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatga 5382060  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  5382061 agagcagtgatgataacatctaggatgatattc 5382093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 250
Target Start/End: Original strand, 5391599 - 5391731
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  | |||    
T  5391599 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatga 5391698  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  5391699 agagcagtgatgataacatctaggatgatattc 5391731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 250
Target Start/End: Complemental strand, 5927051 - 5926919
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  | |||    
T  5927051 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatga 5926952  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  5926951 agagcagtgatgataacatctaggatgatattc 5926919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 250
Target Start/End: Complemental strand, 8500965 - 8500833
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  | |||    
T  8500965 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatga 8500866  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  8500865 agagcagtgatgataacatctaggatgatattc 8500833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 250
Target Start/End: Complemental strand, 8511435 - 8511303
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  | |||    
T  8511435 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatga 8511336  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  8511335 agagcagtgatgataacatctaggatgatattc 8511303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 250
Target Start/End: Original strand, 16132060 - 16132192
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  | |||    
T  16132060 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatga 16132159  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  16132160 agagcagtgataataacatctaggatgatattc 16132192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 250
Target Start/End: Original strand, 16142609 - 16142741
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  | |||    
T  16142609 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatga 16142708  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  16142709 agagcagtgataataacatctaggatgatattc 16142741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 250
Target Start/End: Original strand, 26348295 - 26348427
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  | |||    
T  26348295 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatga 26348394  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  26348395 agagcagtgataataacatctaggatgatattc 26348427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 250
Target Start/End: Complemental strand, 44897233 - 44897101
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  | |||    
T  44897233 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatga 44897134  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  44897133 agagcagtgatgataacatctaggatgatattc 44897101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 250
Target Start/End: Complemental strand, 44907636 - 44907504
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  | |||    
T  44907636 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatga 44907537  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  44907536 agagcagtgatgataacatctaggatgatattc 44907504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 250
Target Start/End: Complemental strand, 46497030 - 46496898
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  | |||    
T  46497030 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatga 46496931  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  46496930 agagcagtgatgataacatctaggatgatattc 46496898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 250
Target Start/End: Complemental strand, 46507642 - 46507510
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  | |||    
T  46507642 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatga 46507543  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  46507542 agagcagtgatgataacatctaggatgatattc 46507510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 148 - 250
Target Start/End: Complemental strand, 6534392 - 6534290
Alignment:
Q  148 tgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatgata 247  Q
    |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  | ||||| ||||||   ||||||||||| ||||||    
T  6534392 tgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatgataacatctaggatgata 6534293  T
Q  248 ttc 250  Q
    |||    
T  6534292 ttc 6534290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 148 - 250
Target Start/End: Complemental strand, 6544691 - 6544589
Alignment:
Q  148 tgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatgata 247  Q
    |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  | ||||| ||||||   ||||||||||| ||||||    
T  6544691 tgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatgataacatctaggatgata 6544592  T
Q  248 ttc 250  Q
    |||    
T  6544591 ttc 6544589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 148 - 250
Target Start/End: Original strand, 26363360 - 26363462
Alignment:
Q  148 tgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatgata 247  Q
    |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  | ||||| ||||||   ||||||||||| ||||||    
T  26363360 tgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgataataacatctaggatgata 26363459  T
Q  248 ttc 250  Q
    |||    
T  26363460 ttc 26363462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 148 - 225
Target Start/End: Complemental strand, 14944193 - 14944116
Alignment:
Q  148 tgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagt 225  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||    
T  14944193 tgtttcacttaggatgatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagagcagt 14944116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 148 - 225
Target Start/End: Complemental strand, 15371786 - 15371709
Alignment:
Q  148 tgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagt 225  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||    
T  15371786 tgtttcacttaggatgatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagagcagt 15371709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 146 - 250
Target Start/End: Original strand, 2992089 - 2992193
Alignment:
Q  146 tttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatga 245  Q
    ||||||||  ||||||| |||| |||||||||||||||||||||||||||||||||||||||||| || ||||| | ||||  | |||||||||| ||||    
T  2992089 tttgtttcatttaggatgatttctaagactaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagagaagtgattgtaacatctaggatga 2992188  T
Q  246 tattc 250  Q
    |||||    
T  2992189 tattc 2992193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 119 - 250
Target Start/End: Original strand, 9535386 - 9535518
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    |||    
T  9535386 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaatgatga 9535485  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  9535486 agagcagtgataataacatctaggatgatattc 9535518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 119 - 250
Target Start/End: Original strand, 9545669 - 9545801
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    |||    
T  9545669 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaatgatga 9545768  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  9545769 agagcagtgataataacatctaggatgatattc 9545801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 119 - 250
Target Start/End: Original strand, 11626510 - 11626642
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| ||||||||| |||||||||||||||||||||||  | |||    
T  11626510 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgcaatcaaatcctaatagtgaaacaataatga 11626609  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  11626610 agagcagtgatgataacatctaggatgatattc 11626642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 119 - 250
Target Start/End: Complemental strand, 32098296 - 32098164
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| ||||||||| |||||||||||||||||||||||  | |||    
T  32098296 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgcaatcaaatcctaatagtgaaacaataatga 32098197  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  32098196 agagcagtgataataacatctaggatgatattc 32098164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 119 - 250
Target Start/End: Complemental strand, 32108733 - 32108601
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| ||||||||| |||||||||||||||||||||||  | |||    
T  32108733 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgcaatcaaatcctaatagtgaaacaataatga 32108634  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  32108633 agagcagtgataataacatctaggatgatattc 32108601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 119 - 250
Target Start/End: Complemental strand, 43983393 - 43983261
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||| | ||||||||||||| |||||||||||||||||||||||||||||||||  | |||    
T  43983393 tgaacattctgatcatcagaatgttccatctgtttcacttaggctgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatga 43983294  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  43983293 agagcagtgatgataacatctaggatgatattc 43983261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 146 - 252
Target Start/End: Original strand, 13285967 - 13286073
Alignment:
Q  146 tttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatga 245  Q
    |||||||| |||||||| ||||||||||||   |||||||||||||||||||||||||||||||||   ||||||||||  || | ||||||||| ||||    
T  13285967 tttgtttcacttaggatgatttgtaagactcttatttgatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatggaaaacatctaggatga 13286066  T
Q  246 tattctt 252  Q
    |||||||    
T  13286067 tattctt 13286073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 146 - 252
Target Start/End: Original strand, 15988851 - 15988957
Alignment:
Q  146 tttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatga 245  Q
    |||||||| |||||||| ||||||||||||   |||||||||||||||||||||||||||||||||   ||||||||||  || | ||||||||| ||||    
T  15988851 tttgtttcacttaggatgatttgtaagactgttatttgatgtaatcaaatcctaatagtgaaacattgatgaagtgcagcatggaaaacatctaggatga 15988950  T
Q  246 tattctt 252  Q
    |||||||    
T  15988951 tattctt 15988957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 131 - 252
Target Start/End: Complemental strand, 41027446 - 41027324
Alignment:
Q  131 acttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgt 229  Q
    |||||| ||||||| ||||||||| |||||||| ||||||||||||   |||||||||||||||||||||||||||||| ||   ||||||||||  ||     
T  41027446 acttcagaatgttccatttgtttcacttaggatgatttgtaagactcttatttgatgtaatcaaatcctaatagtgaaatatttatgaagtgcagcatgg 41027347  T
Q  230 ataacatctagaatgatattctt 252  Q
    | ||||||||| |||||||||||    
T  41027346 aaaacatctaggatgatattctt 41027324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 146 - 252
Target Start/End: Complemental strand, 42595243 - 42595137
Alignment:
Q  146 tttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatga 245  Q
    |||||||| |||||||| ||||||||||||   | |||||||||||||||||||||||||||||||   ||||||||||| || | ||||||||| ||||    
T  42595243 tttgtttcacttaggatgatttgtaagactcttaattgatgtaatcaaatcctaatagtgaaacatttatgaagtgcagtatggaaaacatctaggatga 42595144  T
Q  246 tattctt 252  Q
    |||||||    
T  42595143 tattctt 42595137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 150 - 251
Target Start/End: Original strand, 14248719 - 14248820
Alignment:
Q  150 tttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatgatatt 249  Q
    |||| ||| |||| |||||||||||||||||||||||||||| |||||| ||||||||||| || ||||| ||||||  | |||||||||| ||||||||    
T  14248719 tttcacttgggatgatttgtaagactaccatttgatgtaatcgaatccttatagtgaaacaacaatgaagagcagtgattgtaacatctaggatgatatt 14248818  T
Q  250 ct 251  Q
    ||    
T  14248819 ct 14248820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 146 - 252
Target Start/End: Original strand, 12827541 - 12827647
Alignment:
Q  146 tttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatga 245  Q
    |||||||| |||||||| ||||||||||||   |||||||||||||||||||||||||||||||||   |||||||||   || | ||||||||| ||||    
T  12827541 tttgtttcacttaggatgatttgtaagactcttatttgatgtaatcaaatcctaatagtgaaacattgatgaagtgcaacatggaaaacatctaggatga 12827640  T
Q  246 tattctt 252  Q
    |||||||    
T  12827641 tattctt 12827647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 146 - 252
Target Start/End: Complemental strand, 31824608 - 31824502
Alignment:
Q  146 tttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatga 245  Q
    |||||||| |||||||| ||||||||||||   | |||||||||||||||||||||||||||||||   ||||||||||  || | ||||||||| ||||    
T  31824608 tttgtttcacttaggatgatttgtaagacttgtaattgatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatggaaaacatctaggatga 31824509  T
Q  246 tattctt 252  Q
    |||||||    
T  31824508 tattctt 31824502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 146 - 252
Target Start/End: Original strand, 5615678 - 5615784
Alignment:
Q  146 tttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatga 245  Q
    |||||||| |||||||| ||||||||||||   | || ||||||||||||||||||||||||||||   ||||||||||  || | ||||||||| ||||    
T  5615678 tttgtttcacttaggatgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatggaaaacatctaggatga 5615777  T
Q  246 tattctt 252  Q
    |||||||    
T  5615778 tattctt 5615784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 40701960 - 40701916
Alignment:
Q  1 tcacctaacctcttgcgtgtctaattctcattgaggcacacttga 45  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  40701960 tcacctaacctcttgcgtgtctaattctcattgaggcacacttga 40701916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 150 - 205
Target Start/End: Original strand, 7034931 - 7034986
Alignment:
Q  150 tttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtg 205  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  7034931 tttcacttaggataatttgttagactaccatttgatgtaatcaaatccttatagtg 7034986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 146 - 252
Target Start/End: Complemental strand, 25441974 - 25441868
Alignment:
Q  146 tttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatga 245  Q
    |||||||| |||||||| ||||||||||||   | || || |||||||||||||||||||||||||   |||||||||   || | ||||||||| ||||    
T  25441974 tttgtttcacttaggatgatttgtaagacttgtaattaatataatcaaatcctaatagtgaaacatttatgaagtgcaacatggaaaacatctaggatga 25441875  T
Q  246 tattctt 252  Q
    |||||||    
T  25441874 tattctt 25441868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 95; Significance: 1e-46; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 78 - 252
Target Start/End: Complemental strand, 18536547 - 18536373
Alignment:
Q  78 caactgtacttgtctgtcagatggaaaccacgtgctgaaaatgaactttctgaacttcataatgttcatttgtttctcttaggataatttgtaagactac 177  Q
    |||||||||||||||||||||| | || || |||||| ||||||||||||||||||||| |||||||  || |||| |||||||| |||||||| |||      
T  18536547 caactgtacttgtctgtcagattggaagcaagtgctggaaatgaactttctgaacttcagaatgttcccttatttcacttaggatgatttgtaaaactct 18536448  T
Q  178 catttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatgatattctt 252  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||| | ||||||| |||||| |||||||||||    
T  18536447 catttgatgtaatcaaattctaatagtgaaacatcaatgaagtgcactatgtataagatctaggatgatattctt 18536373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 117 - 252
Target Start/End: Complemental strand, 37295792 - 37295658
Alignment:
Q  117 aatgaactttctgaacttcataatgttcatttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattg 216  Q
    ||||||||||||||||| |||||||||   ||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |   |     
T  37295792 aatgaactttctgaact-cataatgtttcattgtttcacttaggatgatttgtaagactaccatttgatataatcaaatcctaatagtgaaacgttgata 37295694  T
Q  217 aagtgcagtgtgtataacatctagaatgatattctt 252  Q
    |||||| |||| | |||||||||| |||||||||||    
T  37295693 aagtgcggtgtatgtaacatctaggatgatattctt 37295658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 119 - 250
Target Start/End: Complemental strand, 791652 - 791520
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||||| ||| ||||||| || |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||  | |||    
T  791652 tgaacattctgaacatcagaatgttccatctgtttcacttaggatgatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacaataatga 791553  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || |||| |  | |||||||||| |||||||||    
T  791552 agagcagagattttaacatctaggatgatattc 791520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 76 - 224
Target Start/End: Complemental strand, 37816809 - 37816670
Alignment:
Q  76 accaactgtacttgtctgtcagatggaaaccacgtgctgaaaatgaactttctgaacttcataatgttcatttgtttctcttaggataatttgtaagact 175  Q
    ||||| |||||||||| ||||||| ||||  | |||||| |||||||||||||||         |||||||||||||| |||||||| ||||||||||||    
T  37816809 accaattgtacttgtccgtcagattgaaagtatgtgctggaaatgaactttctga---------tgttcatttgtttcacttaggatgatttgtaagact 37816719  T
Q  176 accatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcag 224  Q
      |||||||||||||||||| ||||||||||||||||| ||||||||||    
T  37816718 ctcatttgatgtaatcaaattctaatagtgaaacatcaatgaagtgcag 37816670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 250
Target Start/End: Original strand, 9325179 - 9325311
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  | |||    
T  9325179 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatga 9325278  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  9325279 agagcagtgatgataacatctaggatgatattc 9325311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 146 - 250
Target Start/End: Complemental strand, 17268729 - 17268625
Alignment:
Q  146 tttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatga 245  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| || ||||| ||||||  |  ||||||||| ||||    
T  17268729 tttgtttcacttaggatgatttgtaagactaccatttgatgtaatcaaatcctaataatgaaacaacaatgaagagcagtgacttcaacatctaggatga 17268630  T
Q  246 tattc 250  Q
    |||||    
T  17268629 tattc 17268625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 250
Target Start/End: Original strand, 21202957 - 21203089
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  | |||    
T  21202957 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatga 21203056  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  21203057 agagcagtgatgataacatctaggatgatattc 21203089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 250
Target Start/End: Original strand, 21213373 - 21213505
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  | |||    
T  21213373 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatga 21213472  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  21213473 agagcagtgatgataacatctaggatgatattc 21213505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 250
Target Start/End: Complemental strand, 21334214 - 21334082
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  | |||    
T  21334214 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatga 21334115  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  21334114 agagcagtgatgataacatctaggatgatattc 21334082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 250
Target Start/End: Original strand, 21997617 - 21997749
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  | |||    
T  21997617 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacagtaatga 21997716  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  21997717 agagcagtgataataacatctaggatgatattc 21997749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 119 - 250
Target Start/End: Original strand, 21988083 - 21988215
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||  | |||    
T  21988083 tgaacattctgatcatcagaatgttccatctgtttcacataggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacagtaatga 21988182  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  21988183 agagcagtgataataacatctaggatgatattc 21988215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 146 - 252
Target Start/End: Original strand, 5867563 - 5867669
Alignment:
Q  146 tttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatga 245  Q
    ||||| || |||||||| ||||||||||||  ||||| |||||||||||||||||||||||||||||  ||||| ||| ||| | |||| ||||| ||||    
T  5867563 tttgtatcacttaggatgatttgtaagactctcatttaatgtaatcaaatcctaatagtgaaacatcgatgaagggcaatgtttgtaacgtctaggatga 5867662  T
Q  246 tattctt 252  Q
    |||||||    
T  5867663 tattctt 5867669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 146 - 252
Target Start/End: Complemental strand, 14437261 - 14437155
Alignment:
Q  146 tttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatga 245  Q
    |||||||| |||||||| ||||||||||||   | |||||||||||||||||||||||||||||||   ||||||||||  || | ||||||||| ||||    
T  14437261 tttgtttcacttaggatgatttgtaagacttgtaattgatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatga 14437162  T
Q  246 tattctt 252  Q
    |||||||    
T  14437161 tattctt 14437155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 155 - 209
Target Start/End: Complemental strand, 7757642 - 7757588
Alignment:
Q  155 cttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaac 209  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  7757642 cttaggatgatttgtaagactaccatttgatgtaatcaaatactaatagtgaaac 7757588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 146 - 252
Target Start/End: Original strand, 26362542 - 26362648
Alignment:
Q  146 tttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatga 245  Q
    |||||||| |||||||| ||||||||||||   | ||||||||||||||||||||||||||| |||   ||||||||||  || | ||||||||| ||||    
T  26362542 tttgtttcacttaggatgatttgtaagacttgtaattgatgtaatcaaatcctaatagtgaagcatttatgaagtgcagcatggaaaacatctaggatga 26362641  T
Q  246 tattctt 252  Q
    |||||||    
T  26362642 tattctt 26362648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 142 - 251
Target Start/End: Original strand, 2690459 - 2690568
Alignment:
Q  142 ttcatttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtg-aaacatcattgaagtgcagtgtgtataacatctag 240  Q
    |||||||||||| |||||||| ||||||||||||   ||||| ||||||| ||||||||||||| ||| || | ||||||||||||  | ||| ||||||    
T  2690459 ttcatttgtttcacttaggatgatttgtaagacttgtatttggtgtaatc-aatcctaatagtgaaaatataactgaagtgcagtgattgtaatatctag 2690557  T
Q  241 aatgatattct 251  Q
     ||||||||||    
T  2690558 gatgatattct 2690568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 92; Significance: 9e-45; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 109 - 252
Target Start/End: Original strand, 241828 - 241971
Alignment:
Q  109 gtgctgaaaatgaactttctgaacttcataatgttcatttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaa 208  Q
    |||||| ||| ||||||||||||||||||||||||| |||||||| |||||||| |||||||||||| | |||||||||||||| ||||||||||| | |    
T  241828 gtgctggaaacgaactttctgaacttcataatgttcctttgtttcacttaggatgatttgtaagacttctatttgatgtaatcagatcctaatagtaata 241927  T
Q  209 catcattgaagtgcagtgtgtataacatctagaatgatattctt 252  Q
    ||||| ||||||| |||||||||||||||||| |||||||||||    
T  241928 catcaatgaagtgtagtgtgtataacatctaggatgatattctt 241971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 88; Significance: 2e-42; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 109 - 252
Target Start/End: Original strand, 9761591 - 9761734
Alignment:
Q  109 gtgctgaaaatgaactttctgaacttcataatgttcatttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaa 208  Q
    ||||||||||||||| |||||||||||| ||||||||| | |||| |||||||| |||||||||| | | |||||||||||||||||| ||| ||| |||    
T  9761591 gtgctgaaaatgaaccttctgaacttcagaatgttcatctatttcacttaggatgatttgtaagatttctatttgatgtaatcaaatcttaacagtaaaa 9761690  T
Q  209 catcattgaagtgcagtgtgtataacatctagaatgatattctt 252  Q
    ||||| |||||||||||||||||||||||||| |||||||||||    
T  9761691 catcaatgaagtgcagtgtgtataacatctaggatgatattctt 9761734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 134 - 250
Target Start/End: Complemental strand, 14791504 - 14791387
Alignment:
Q  134 tcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtata 232  Q
    ||||||||||| || |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||  | ||||| ||||||  | ||    
T  14791504 tcataatgttccatctgtttcacttaggatgatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatttta 14791405  T
Q  233 acatctagaatgatattc 250  Q
    |||||||| |||||||||    
T  14791404 acatctaggatgatattc 14791387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 146 - 250
Target Start/End: Original strand, 27787741 - 27787845
Alignment:
Q  146 tttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatga 245  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| || ||||| ||||||  | |||||||||| ||||    
T  27787741 tttgtttcacttaggatgatttgtaagactaccatttgatgtaatcatatcctaatagtgaaacaacaatgaagagcagtgattgtaacatctaggatga 27787840  T
Q  246 tattc 250  Q
    |||||    
T  27787841 tattc 27787845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 119 - 230
Target Start/End: Complemental strand, 28092498 - 28092387
Alignment:
Q  119 tgaactttctgaacttcataatgttcatttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaa 218  Q
    ||||| |||||||||||| || |||| ||| |||| |||||||| || |||||||||  |||||||||||||||||||||||||||||||||||| ||||    
T  28092498 tgaacattctgaacttcagaaagttcctttatttcacttaggattatgtgtaagactctcatttgatgtaatcaaatcctaatagtgaaacatcaatgaa 28092399  T
Q  219 gtgcagtgtgta 230  Q
    ||| ||||||||    
T  28092398 gtgtagtgtgta 28092387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 250
Target Start/End: Complemental strand, 12454969 - 12454837
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  | |||    
T  12454969 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatga 12454870  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  12454869 agagcagtgatgataacatctaggatgatattc 12454837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 250
Target Start/End: Complemental strand, 20912198 - 20912066
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  | |||    
T  20912198 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatga 20912099  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  20912098 agagcagtgataataacatctaggatgatattc 20912066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 119 - 250
Target Start/End: Complemental strand, 18159977 - 18159845
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||| | ||||||||||||| |||||||||||||||||||||||||||||||||  | |||    
T  18159977 tgaacattctgatcatcagaatgttccatctgtttcacttaggctgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatga 18159878  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  18159877 agagcagtgatgataacatctaggatgatattc 18159845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 119 - 250
Target Start/End: Complemental strand, 18169789 - 18169657
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||| | ||||||||||||| |||||||||||||||||||||||||||||||||  | |||    
T  18169789 tgaacattctgatcatcagaatgttccatctgtttcacttaggctgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatga 18169690  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  18169689 agagcagtgatgataacatctaggatgatattc 18169657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 119 - 210
Target Start/End: Complemental strand, 29540373 - 29540281
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaaca 210  Q
    ||||| |||||| | ||| ||||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  29540373 tgaacattctgaccatcagaatgttccatttgtttcacttaggatgatttgtaagactaccatttgatgtaatcaaattctaatagtgaaaca 29540281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 119 - 250
Target Start/End: Complemental strand, 31357476 - 31357344
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||| | ||||||||||||| |||||||||||||||||||||||||||||||||  | |||    
T  31357476 tgaacattctgatcatcagaatgttccatctgtttcacttaggctgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatga 31357377  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  31357376 agagcagtgataataacatctaggatgatattc 31357344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 119 - 250
Target Start/End: Complemental strand, 31367204 - 31367072
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||| | ||||||||||||| |||||||||||||||||||||||||||||||||  | |||    
T  31367204 tgaacattctgatcatcagaatgttccatctgtttcacttaggctgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatga 31367105  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  31367104 agagcagtgataataacatctaggatgatattc 31367072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 119 - 210
Target Start/End: Complemental strand, 3285761 - 3285669
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaaca 210  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  3285761 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaaca 3285669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 119 - 250
Target Start/End: Complemental strand, 16897862 - 16897730
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| ||||| || ||||||||||||| |||||||||||||||||||||||||||||||||  | |||    
T  16897862 tgaacattctgatcatcagaatgttccatctgtttcacttagaatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatga 16897763  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    ||  |||||   ||||||||||| |||||||||    
T  16897762 agaacagtgataataacatctaggatgatattc 16897730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 119 - 250
Target Start/End: Complemental strand, 16908515 - 16908383
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| ||||| || ||||||||||||| |||||||||||||||||||||||||||||||||  | |||    
T  16908515 tgaacattctgatcatcagaatgttccatctgtttcacttagaatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatga 16908416  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    ||  |||||   ||||||||||| |||||||||    
T  16908415 agaacagtgataataacatctaggatgatattc 16908383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 119 - 250
Target Start/End: Complemental strand, 18201132 - 18201001
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || ||| || |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| || |||    
T  18201132 tgaacattctgaccatcagaatgttccatctgtatcacttaggatgatttgtaagactacc-tttgatgtaatcaaatcctaatagtgaaacaacaatga 18201034  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||    |||||||||| |||||||||    
T  18201033 agagcagtgatattaacatctaggatgatattc 18201001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 119 - 210
Target Start/End: Original strand, 24922145 - 24922237
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaaca 210  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  24922145 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaaca 24922237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 119 - 210
Target Start/End: Original strand, 24931181 - 24931273
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaaca 210  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  24931181 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaaca 24931273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 146 - 252
Target Start/End: Original strand, 22223773 - 22223879
Alignment:
Q  146 tttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatga 245  Q
    |||||||| |||||||| ||||||||||||   | |||||||||||||||||||||||||||||||   ||||||||||  || | ||||||||| ||||    
T  22223773 tttgtttcacttaggatgatttgtaagacttttaattgatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatggaaaacatctaggatga 22223872  T
Q  246 tattctt 252  Q
    |||||||    
T  22223873 tattctt 22223879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 146 - 252
Target Start/End: Original strand, 22249608 - 22249714
Alignment:
Q  146 tttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatga 245  Q
    |||||||| |||||||| ||||||||||||   | |||||||||||||||||||||||||||||||   ||||||||||  || | ||||||||| ||||    
T  22249608 tttgtttcacttaggatgatttgtaagacttttaattgatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatggaaaacatctaggatga 22249707  T
Q  246 tattctt 252  Q
    |||||||    
T  22249708 tattctt 22249714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 119 - 210
Target Start/End: Complemental strand, 14045230 - 14045138
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaaca 210  Q
    ||||| |||||| | ||||||||||| || |||||| |||||||| |||||| |||||| | |||||||||||||||||||||||||||||||    
T  14045230 tgaacattctgaccatcataatgttccatctgtttcacttaggatgatttgtgagactatcttttgatgtaatcaaatcctaatagtgaaaca 14045138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 146 - 252
Target Start/End: Original strand, 8563423 - 8563529
Alignment:
Q  146 tttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatga 245  Q
    |||||||| |||||||| ||||||||||||   | |||||||||||||||||||||| ||||||||   ||||||||||  || | ||||||||| ||||    
T  8563423 tttgtttcacttaggatgatttgtaagactcttaattgatgtaatcaaatcctaatattgaaacatttatgaagtgcagcatggaaaacatctaggatga 8563522  T
Q  246 tattctt 252  Q
    |||||||    
T  8563523 tattctt 8563529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 146 - 252
Target Start/End: Complemental strand, 34765215 - 34765109
Alignment:
Q  146 tttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatga 245  Q
    |||||||| |||||||| ||||||||||||   | || ||||||||||||||||||||||||||||   ||||||||||  || | ||||||||| ||||    
T  34765215 tttgtttcacttaggatgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatggaaaacatctaggatga 34765116  T
Q  246 tattctt 252  Q
    |||||||    
T  34765115 tattctt 34765109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 146 - 201
Target Start/End: Original strand, 24361876 - 24361931
Alignment:
Q  146 tttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaat 201  Q
    |||||||| |||||||| ||||||||||||   | |||||||||||||||||||||    
T  24361876 tttgtttcacttaggatgatttgtaagacttttaattgatgtaatcaaatcctaat 24361931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 74; Significance: 5e-34; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 75 - 252
Target Start/End: Original strand, 40409144 - 40409320
Alignment:
Q  75 caccaactgtacttgtctgtcagatggaaaccacgtgctgaaaatgaactttctgaacttcataatgttcatttgtttctcttaggataatttgtaagac 174  Q
    |||||| ||||||||||||| |||| | || ||||||  | ||||||||||| |||||| || ||| ||| |||||||| |||||||  |||||||||||    
T  40409144 caccaattgtacttgtctgttagattggaagcacgtgtgggaaatgaactttttgaact-cagaatattcctttgtttcacttaggaagatttgtaagac 40409242  T
Q  175 taccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatgatattctt 252  Q
    |  |||||||||||||||||  ||||||||||||||||| ||||||| ||| ||| |||||||||| |||||||||||    
T  40409243 tctcatttgatgtaatcaaactctaatagtgaaacatcaatgaagtgtagtatgtgtaacatctaggatgatattctt 40409320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 119 - 250
Target Start/End: Original strand, 24696648 - 24696780
Alignment:
Q  119 tgaactttctgaacttcataatgttcatt-tgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||  | |||    
T  24696648 tgaacattctgatcatcagaatgttccttctgtttcacttaggatgatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacaataatga 24696747  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||  | |||||||||| |||||||||    
T  24696748 agagcagtgattttaacatctaggatgatattc 24696780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 250
Target Start/End: Original strand, 2998760 - 2998892
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  | |||    
T  2998760 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatga 2998859  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  2998860 agagcagtgataataacatctaggatgatattc 2998892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 250
Target Start/End: Original strand, 9502824 - 9502956
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  | |||    
T  9502824 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatga 9502923  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  9502924 agagcagtgatgataacatctaggatgatattc 9502956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 250
Target Start/End: Original strand, 9514190 - 9514322
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  | |||    
T  9514190 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatga 9514289  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  9514290 agagcagtgatgataacatctaggatgatattc 9514322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 250
Target Start/End: Complemental strand, 18651134 - 18651002
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  | |||    
T  18651134 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatga 18651035  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  18651034 agagcagtgatgataacatctaggatgatattc 18651002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 250
Target Start/End: Complemental strand, 18663252 - 18663120
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  | |||    
T  18663252 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatga 18663153  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  18663152 agagcagtgatgataacatctaggatgatattc 18663120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 250
Target Start/End: Original strand, 38957881 - 38958013
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||  | |||    
T  38957881 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactaccatttgatataatcaaatcctaatagtgaaacaataatga 38957980  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || || |||  | ||||||||||||||||||||    
T  38957981 agagcggtgattttaacatctagaatgatattc 38958013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 250
Target Start/End: Complemental strand, 45014648 - 45014516
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  | |||    
T  45014648 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatga 45014549  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  45014548 agagcagtgataataacatctaggatgatattc 45014516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 250
Target Start/End: Complemental strand, 45024725 - 45024593
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  | |||    
T  45024725 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatga 45024626  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  45024625 agagcagtgataataacatctaggatgatattc 45024593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 119 - 249
Target Start/End: Complemental strand, 17488606 - 17488475
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  | |||    
T  17488606 tgaacattctgatcgtcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatga 17488507  T
Q  218 agtgcagtgtgtataacatctagaatgatatt 249  Q
    || ||||||   ||||||||||| ||||||||    
T  17488506 agagcagtgataataacatctaggatgatatt 17488475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 148 - 250
Target Start/End: Complemental strand, 4458081 - 4457979
Alignment:
Q  148 tgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatgata 247  Q
    |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  | ||||| ||||||   ||||||||||| ||||||    
T  4458081 tgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgataataacatctaggatgata 4457982  T
Q  248 ttc 250  Q
    |||    
T  4457981 ttc 4457979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 148 - 250
Target Start/End: Complemental strand, 4467706 - 4467604
Alignment:
Q  148 tgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatgata 247  Q
    |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  | ||||| ||||||   ||||||||||| ||||||    
T  4467706 tgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgataataacatctaggatgata 4467607  T
Q  248 ttc 250  Q
    |||    
T  4467606 ttc 4467604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 251
Target Start/End: Original strand, 72299 - 72412
Alignment:
Q  138 aatgttcatttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatc 237  Q
    |||||||||||||||| ||||| || ||||||||||||||||||||||||||| ||||||||||||||||||| ||  |||| ||||||  |  ||||||    
T  72299 aatgttcatttgtttcacttagaatgatttgtaagactaccatttgatgtaattaaatcctaatagtgaaacagcaacgaagagcagtgattgcaacatc 72398  T
Q  238 tagaatgatattct 251  Q
    ||  ||||||||||    
T  72399 taagatgatattct 72412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 119 - 251
Target Start/End: Original strand, 38930545 - 38930678
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||  | |||    
T  38930545 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactaccatttgatgtaatcaaatcctaatagtgaagcaataatga 38930644  T
Q  218 agtgcagtgtgtataacatctagaatgatattct 251  Q
    || ||| ||  | |||||||||| ||||||||||    
T  38930645 agagcaatgattttaacatctaggatgatattct 38930678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 119 - 210
Target Start/End: Complemental strand, 29423281 - 29423189
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaaca 210  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  29423281 tgaacattctgaccatcagaatgttccatctgtttcacttaggatgatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaaca 29423189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 148 - 250
Target Start/End: Original strand, 5337228 - 5337330
Alignment:
Q  148 tgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatgata 247  Q
    |||||| |||||| | ||||||||||||| |||||||||||||||||||||||||||||||||  | ||||| ||||||   ||||||||||| ||||||    
T  5337228 tgtttcacttaggctgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatgataacatctaggatgata 5337327  T
Q  248 ttc 250  Q
    |||    
T  5337328 ttc 5337330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 148 - 250
Target Start/End: Original strand, 5347081 - 5347183
Alignment:
Q  148 tgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatgata 247  Q
    |||||| |||||| | ||||||||||||| |||||||||||||||||||||||||||||||||  | ||||| ||||||   ||||||||||| ||||||    
T  5347081 tgtttcacttaggctgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatgataacatctaggatgata 5347180  T
Q  248 ttc 250  Q
    |||    
T  5347181 ttc 5347183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 121 - 247
Target Start/End: Complemental strand, 16327924 - 16327799
Alignment:
Q  121 aactttctgaacttcataatgttcatttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagt 220  Q
    ||||||||||||| || ||||||| ||||||||  ||  ||| ||||||||||||||||||||||| |||| ||||| || |||||||||||  ||||||    
T  16327924 aactttctgaact-cagaatgttcctttgtttcagtttagatgatttgtaagactaccatttgatgcaatcgaatcccaacagtgaaacatcgatgaagt 16327826  T
Q  221 gcagtgtgtataacatctagaatgata 247  Q
    ||||| ||||| |||||||| ||||||    
T  16327825 gcagtatgtattacatctaggatgata 16327799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 119 - 210
Target Start/End: Original strand, 44639089 - 44639180
Alignment:
Q  119 tgaactttctgaacttcataatgttcatttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaaca 210  Q
    ||||| |||||| | ||| ||||||| |||||||| |||| ||| |||||||||||||||||||||||||||||||||||| |||| |||||    
T  44639089 tgaacattctgaccatcagaatgttcctttgtttcacttaagatgatttgtaagactaccatttgatgtaatcaaatcctagtagttaaaca 44639180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 121 - 247
Target Start/End: Original strand, 16135297 - 16135422
Alignment:
Q  121 aactttctgaacttcataatgttcatttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagt 220  Q
    ||||||||||||| |||||||||| ||||||||  ||  ||| ||||||||||||||||||||||| |||| |||||||| |||||||||||  |||| |    
T  16135297 aactttctgaact-cataatgttcctttgtttcagtttagatgatttgtaagactaccatttgatgcaatcgaatcctaacagtgaaacatcgatgaaat 16135395  T
Q  221 gcagtgtgtataacatctagaatgata 247  Q
    ||| | ||||| |||| ||| ||||||    
T  16135396 gcaatatgtattacatataggatgata 16135422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 131 - 211
Target Start/End: Complemental strand, 23721815 - 23721734
Alignment:
Q  131 acttcataatgttcattt-gtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacat 211  Q
    |||||||||||||| ||| ||||| |||||||| ||||||||||||   |||||||||||||||||||||||||||||||||    
T  23721815 acttcataatgttccttttgtttcacttaggatgatttgtaagactcttatttgatgtaatcaaatcctaatagtgaaacat 23721734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 146 - 252
Target Start/End: Complemental strand, 22901972 - 22901866
Alignment:
Q  146 tttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatga 245  Q
    ||||||||  ||||||| ||||||||||||   |||||||||||||||||||||||||||||||||   |||||||||   || | ||||||||| ||||    
T  22901972 tttgtttcagttaggatgatttgtaagactcttatttgatgtaatcaaatcctaatagtgaaacatttatgaagtgcaacatggaaaacatctaggatga 22901873  T
Q  246 tattctt 252  Q
    |||||||    
T  22901872 tattctt 22901866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 146 - 252
Target Start/End: Original strand, 22908966 - 22909072
Alignment:
Q  146 tttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatga 245  Q
    |||||||| |||||||| ||||||||||||   |||||||||||||||||||||||| ||||||||   ||||||| ||  || | ||||||||| ||||    
T  22908966 tttgtttcacttaggatgatttgtaagactcttatttgatgtaatcaaatcctaataatgaaacatttatgaagtggagcatggaaaacatctaggatga 22909065  T
Q  246 tattctt 252  Q
    |||||||    
T  22909066 tattctt 22909072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 146 - 252
Target Start/End: Original strand, 27160114 - 27160220
Alignment:
Q  146 tttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatga 245  Q
    |||||||  |||||||| ||||||||||||   | || |||||||||||||||||||||||||||||  ||||||||||  || | ||||||||| ||||    
T  27160114 tttgttttacttaggatgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatctatgaagtgcagcatggaaaacatctaggatga 27160213  T
Q  246 tattctt 252  Q
    |||||||    
T  27160214 tattctt 27160220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 146 - 252
Target Start/End: Original strand, 27170483 - 27170589
Alignment:
Q  146 tttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatga 245  Q
    |||||||  |||||||| ||||||||||||   | || |||||||||||||||||||||||||||||  ||||||||||  || | ||||||||| ||||    
T  27170483 tttgttttacttaggatgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatctatgaagtgcagcatggaaaacatctaggatga 27170582  T
Q  246 tattctt 252  Q
    |||||||    
T  27170583 tattctt 27170589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 146 - 211
Target Start/End: Complemental strand, 19342169 - 19342104
Alignment:
Q  146 tttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacat 211  Q
    |||||||| |||||||| ||||||||||||   |||||||||||||||||||||||||||||||||    
T  19342169 tttgtttcacttaggatgatttgtaagactcttatttgatgtaatcaaatcctaatagtgaaacat 19342104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 74; Significance: 5e-34; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 146 - 251
Target Start/End: Complemental strand, 34822913 - 34822808
Alignment:
Q  146 tttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatga 245  Q
    |||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||| | |||||||||| ||||    
T  34822913 tttgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaacaatgaagtgcagtgtttgtaacatctagtatga 34822814  T
Q  246 tattct 251  Q
    ||||||    
T  34822813 tattct 34822808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 119 - 250
Target Start/End: Complemental strand, 2115916 - 2115784
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||  | |||    
T  2115916 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacaataatga 2115817  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||  | |||||||||| |||||||||    
T  2115816 agagcagtgattttaacatctaggatgatattc 2115784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 119 - 250
Target Start/End: Complemental strand, 8540167 - 8540035
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||    
T  8540167 tgaacattctgaccatcagaatgttccatctgtttcacttaggatgatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacaacaatga 8540068  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||    |||||||||| |||||||||    
T  8540067 agagcagtgatattaacatctaggatgatattc 8540035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 119 - 250
Target Start/End: Complemental strand, 21886229 - 21886097
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||  | |||    
T  21886229 tgaacattctgaccatcagaatgttccatctgtttcacttaggatgatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacaataatga 21886130  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||  | |||||||||| |||||||||    
T  21886129 agagcagtgattttaacatctaggatgatattc 21886097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 119 - 249
Target Start/End: Original strand, 41544255 - 41544386
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||    
T  41544255 tgaacattctgaccatcagaatgttccatctgtttcacttaggatgatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacaacactga 41544354  T
Q  218 agtgcagtgtgtataacatctagaatgatatt 249  Q
    || ||||||    |||||||||| ||||||||    
T  41544355 agagcagtgatattaacatctaggatgatatt 41544386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 250
Target Start/End: Complemental strand, 16154799 - 16154667
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  | |||    
T  16154799 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatga 16154700  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  16154699 agagcagtgataataacatctaggatgatattc 16154667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 146 - 250
Target Start/End: Complemental strand, 18383249 - 18383145
Alignment:
Q  146 tttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatga 245  Q
    |||||||| |||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||| || ||||| ||||||  | |||||||||| ||||    
T  18383249 tttgtttcacttaggatgatttgtaagactatcatttgatgtaattaaatcctaatagtgaaacaacaatgaagagcagtgaatttaacatctaggatga 18383150  T
Q  246 tattc 250  Q
    |||||    
T  18383149 tattc 18383145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 250
Target Start/End: Complemental strand, 21458544 - 21458412
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  | |||    
T  21458544 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatga 21458445  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  21458444 agagcagtgatgataacatctaggatgatattc 21458412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 250
Target Start/End: Original strand, 30549750 - 30549882
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||  | |||    
T  30549750 tgaacattctgatcatcagaatgttccatctgtttcacttaagatgatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacaataatga 30549849  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||  | |||||||||| |||||||||    
T  30549850 agagcagtgattttaacatctagcatgatattc 30549882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 134 - 252
Target Start/End: Complemental strand, 50941063 - 50940946
Alignment:
Q  134 tcataatgttcatttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataa 233  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| | |||  ||||||| ||||||||  |||||||| | |  ||||    
T  50941063 tcataatgttcatttgtttcacttaggataatttgtaagacttccatttgatgtaa-ccaattttaatagtaaaacatcaacgaagtgcaattttcataa 50940965  T
Q  234 catctagaatgatattctt 252  Q
    ||||||| |||||||||||    
T  50940964 catctaggatgatattctt 50940946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 146 - 251
Target Start/End: Original strand, 1186593 - 1186698
Alignment:
Q  146 tttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatga 245  Q
    |||||||| |||| ||| |||||||||||| |||||||||||||||||||||||||||||||||| || ||||| |||| |  | |||||||||| ||||    
T  1186593 tttgtttcacttatgatgatttgtaagacttccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagagcagagattgtaacatctaggatga 1186692  T
Q  246 tattct 251  Q
    ||||||    
T  1186693 tattct 1186698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 119 - 250
Target Start/End: Complemental strand, 8605406 - 8605274
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||||||||||||||||||||||||||||| | ||||| || |||    
T  8605406 tgaacattctgaccatcagaatgttccatctgtttcacttaggatgatttgtaagactaccatttgatgtaatcaaatcctaatacttaaacaacaatga 8605307  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||    |||||||||| |||||||||    
T  8605306 agagcagtgatattaacatctaggatgatattc 8605274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 119 - 226
Target Start/End: Complemental strand, 42034111 - 42034003
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| || |||    
T  42034111 tgaacattctgaccatcagaatgttccatctgtttcacttaggatgatttgtaagactaccatctgatgtaatcaaatcctaatagtgaaacaacaatga 42034012  T
Q  218 agtgcagtg 226  Q
    || ||||||    
T  42034011 agagcagtg 42034003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 131 - 252
Target Start/End: Original strand, 1989655 - 1989777
Alignment:
Q  131 acttcataatgtt-catttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgt 229  Q
    ||||||||||||| | |||||||| |||||||| ||||||||||||   ||||||||||||||||||||||||||||| |||   ||||||||||  ||     
T  1989655 acttcataatgtttcttttgtttcacttaggatgatttgtaagacttgtatttgatgtaatcaaatcctaatagtgaagcatttatgaagtgcagcatgg 1989754  T
Q  230 ataacatctagaatgatattctt 252  Q
    | ||||||||| |||||||||||    
T  1989755 aaaacatctaggatgatattctt 1989777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 148 - 226
Target Start/End: Complemental strand, 13964781 - 13964703
Alignment:
Q  148 tgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtg 226  Q
    |||||| |||||||| |||||||||||||||||| |||||||||||||||||||||||||||| || ||||| ||||||    
T  13964781 tgtttcacttaggatgatttgtaagactaccattagatgtaatcaaatcctaatagtgaaacaacaatgaagagcagtg 13964703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 148 - 250
Target Start/End: Complemental strand, 25019354 - 25019252
Alignment:
Q  148 tgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatgata 247  Q
    |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    ||||| ||||||   ||||||||||| ||||||    
T  25019354 tgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaatgatgaagagcagtgataataacatctaggatgata 25019255  T
Q  248 ttc 250  Q
    |||    
T  25019254 ttc 25019252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 146 - 252
Target Start/End: Original strand, 52955471 - 52955577
Alignment:
Q  146 tttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatga 245  Q
    |||||||| |||||||| ||||||||||||   ||||||||||||||||| |||||||||||||||   |||||||||| ||| | ||||||||| ||||    
T  52955471 tttgtttcacttaggatgatttgtaagactcttatttgatgtaatcaaattctaatagtgaaacatttatgaagtgcagcgtggaaaacatctaggatga 52955570  T
Q  246 tattctt 252  Q
    |||||||    
T  52955571 tattctt 52955577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 146 - 250
Target Start/End: Original strand, 2370580 - 2370684
Alignment:
Q  146 tttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatga 245  Q
    |||||||| |||| ||| |||| |||||||||||||||||||||||||||||||||||||||| | || ||||| ||| ||  | |||||||||| ||||    
T  2370580 tttgtttcacttatgatgatttataagactaccatttgatgtaatcaaatcctaatagtgaaaaaacaatgaagagcaatgattttaacatctaggatga 2370679  T
Q  246 tattc 250  Q
    |||||    
T  2370680 tattc 2370684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 131 - 252
Target Start/End: Original strand, 1982237 - 1982359
Alignment:
Q  131 acttcataatgtt-catttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgt 229  Q
    ||||||||||||| | |||||||| ||||| || ||||||||||||   ||||||||||||||||||||||||||||| |||   ||||||||||  ||     
T  1982237 acttcataatgtttcttttgtttcacttagaatgatttgtaagacttgtatttgatgtaatcaaatcctaatagtgaagcatttatgaagtgcagcatgg 1982336  T
Q  230 ataacatctagaatgatattctt 252  Q
    | ||||||||| |||||||||||    
T  1982337 aaaacatctaggatgatattctt 1982359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 146 - 226
Target Start/End: Original strand, 18062393 - 18062473
Alignment:
Q  146 tttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtg 226  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||| |||| |||| |||| || ||||| ||||||    
T  18062393 tttgtttcacttaggattatttgtaagactaccatttgatgtaatcaaattctaacagtggaacaacaatgaagagcagtg 18062473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 146 - 252
Target Start/End: Original strand, 1974887 - 1974993
Alignment:
Q  146 tttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatga 245  Q
    |||||||| |||||||| ||||||||||||   | || ||||||||||||||||||||||||||||   ||||||||||  || | ||||||||| ||||    
T  1974887 tttgtttcacttaggatgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatggaaaacatctaggatga 1974986  T
Q  246 tattctt 252  Q
    |||||||    
T  1974987 tattctt 1974993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 134 - 196
Target Start/End: Complemental strand, 30210931 - 30210869
Alignment:
Q  134 tcataatgttcatttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatc 196  Q
    ||||||||||||||||||||| ||||||| ||||||||||||  |||||||||||||||||||    
T  30210931 tcataatgttcatttgtttctattaggatgatttgtaagactttcatttgatgtaatcaaatc 30210869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 146 - 252
Target Start/End: Complemental strand, 41208415 - 41208309
Alignment:
Q  146 tttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatga 245  Q
    |||||||| |||||||| ||||||||||||   | || ||||||||||||||||||||||||||||   ||||||||||  || | ||||||||| ||||    
T  41208415 tttgtttcacttaggatgatttgtaagacttgtaatttatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatggaaaacatctaggatga 41208316  T
Q  246 tattctt 252  Q
    |||||||    
T  41208315 tattctt 41208309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 144 - 252
Target Start/End: Complemental strand, 22956445 - 22956337
Alignment:
Q  144 catttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtg-aaacatcattgaagtgcagtgtgtataacatctagaa 242  Q
    |||||||||| |||||||| ||||||||||||   ||||||||||| | ||||||||||||| |||||| | ||||||||||||  |  ||||||||| |    
T  22956445 catttgtttcacttaggatgatttgtaagacttgtatttgatgtaaac-aatcctaatagtgaaaacataactgaagtgcagtgattgcaacatctagga 22956347  T
Q  243 tgatattctt 252  Q
    ||||||||||    
T  22956346 tgatattctt 22956337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 1e-31; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 75 - 252
Target Start/End: Complemental strand, 41525815 - 41525639
Alignment:
Q  75 caccaactgtacttgtctgtcagatggaaaccacgtgctgaaaatgaactttctgaacttcataatgttcatttgtttctcttaggataatttgtaagac 174  Q
    |||||| | ||||||||||||||||  ||| || |||||| ||| |||| ||||||||| || |||||||||||||||  |||||||| |||||||||||    
T  41525815 caccaaatttacttgtctgtcagatttaaagcatgtgctggaaacgaacattctgaact-caaaatgttcatttgttttacttaggatgatttgtaagac 41525717  T
Q  175 taccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatgatattctt 252  Q
      |||||||||||||| ||||||||||||| |||||| | |||||||||   |||||||||| ||  |||||||||||    
T  41525716 atccatttgatgtaattaaatcctaatagtaaaacataaatgaagtgcatcatgtataacatttaagatgatattctt 41525639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 146 - 250
Target Start/End: Original strand, 9836240 - 9836344
Alignment:
Q  146 tttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatga 245  Q
    |||||||| |||||||| |||||||||||||||||||||| |||||||||||||||||||||||| || ||||| ||||||  || ||||||||| ||||    
T  9836240 tttgtttcacttaggatgatttgtaagactaccatttgatataatcaaatcctaatagtgaaacaacaatgaagagcagtgattaaaacatctaggatga 9836339  T
Q  246 tattc 250  Q
    |||||    
T  9836340 tattc 9836344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 146 - 250
Target Start/End: Original strand, 13793240 - 13793344
Alignment:
Q  146 tttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatga 245  Q
    ||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||  | |||||||||| ||||    
T  13793240 tttgtttcatttaggatgatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagagcagtgattgtaacatctaggatga 13793339  T
Q  246 tattc 250  Q
    |||||    
T  13793340 tattc 13793344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 119 - 250
Target Start/End: Complemental strand, 15669103 - 15668971
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| ||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||  | |||    
T  15669103 tgaacattctgaccatcagaatgttccatttgtttcactttggatgatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacaataatga 15669004  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||  | |||||||||| |||||||||    
T  15669003 agagcagtgattttaacatctaggatgatattc 15668971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 119 - 250
Target Start/End: Complemental strand, 16241977 - 16241845
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||  | |||    
T  16241977 tgaacattctgaccatcagaatgttccatctgtttcacttaggatgatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacaataatga 16241878  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||  | |||||||||| |||||||||    
T  16241877 agagcagtgattttaacatctaggatgatattc 16241845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 148 - 250
Target Start/End: Original strand, 13403219 - 13403321
Alignment:
Q  148 tgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatgata 247  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||  |||||  | |||||||||| ||||||    
T  13403219 tgtttcacttaggatgatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagaacagtgattttaacatctaggatgata 13403318  T
Q  248 ttc 250  Q
    |||    
T  13403319 ttc 13403321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 148 - 250
Target Start/End: Complemental strand, 26331111 - 26331009
Alignment:
Q  148 tgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatgata 247  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||    |||||||||| ||||||    
T  26331111 tgtttcacttaggatgatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagagcagtgatattaacatctaggatgata 26331012  T
Q  248 ttc 250  Q
    |||    
T  26331011 ttc 26331009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 250
Target Start/End: Complemental strand, 6692134 - 6692002
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  | |||    
T  6692134 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatga 6692035  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  6692034 agagcagtgatgataacatctaggatgatattc 6692002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 250
Target Start/End: Complemental strand, 6702540 - 6702408
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  | |||    
T  6702540 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatga 6702441  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  6702440 agagcagtgatgataacatctaggatgatattc 6702408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 250
Target Start/End: Complemental strand, 16249362 - 16249230
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  | |||    
T  16249362 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatga 16249263  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  16249262 agagcagtgataataacatctaggatgatattc 16249230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 250
Target Start/End: Complemental strand, 16253328 - 16253196
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||  | |||    
T  16253328 tgaacattctgaccatcagaatgttccatctgtttcacttaggatgatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacaataatga 16253229  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || |||||   | |||||||||| |||||||||    
T  16253228 agagcagtaattttaacatctaggatgatattc 16253196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 250
Target Start/End: Original strand, 17985017 - 17985149
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  | |||    
T  17985017 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatga 17985116  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  17985117 agagcagtgataataacatctaggatgatattc 17985149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 250
Target Start/End: Original strand, 18105568 - 18105700
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  | |||    
T  18105568 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatga 18105667  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  18105668 agagcagtgataataacatctaggatgatattc 18105700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 250
Target Start/End: Complemental strand, 21846019 - 21845887
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  | |||    
T  21846019 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatga 21845920  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  21845919 agagcagtgatgataacatctaggatgatattc 21845887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 250
Target Start/End: Complemental strand, 21855611 - 21855479
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  | |||    
T  21855611 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatga 21855512  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  21855511 agagcagtgatgataacatctaggatgatattc 21855479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 250
Target Start/End: Complemental strand, 21901882 - 21901750
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  | |||    
T  21901882 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatga 21901783  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  21901782 agagcagtgatgataacatctaggatgatattc 21901750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 250
Target Start/End: Complemental strand, 21911474 - 21911342
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  | |||    
T  21911474 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatga 21911375  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  21911374 agagcagtgatgataacatctaggatgatattc 21911342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 250
Target Start/End: Complemental strand, 40921759 - 40921627
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  | |||    
T  40921759 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatga 40921660  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  40921659 agagcagtgatgataacatctaggatgatattc 40921627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 148 - 250
Target Start/End: Original strand, 5293271 - 5293373
Alignment:
Q  148 tgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatgata 247  Q
    |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  | ||||| ||||||   ||||||||||| ||||||    
T  5293271 tgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgataataacatctaggatgata 5293370  T
Q  248 ttc 250  Q
    |||    
T  5293371 ttc 5293373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 148 - 250
Target Start/End: Original strand, 5302930 - 5303032
Alignment:
Q  148 tgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatgata 247  Q
    |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  | ||||| ||||||   ||||||||||| ||||||    
T  5302930 tgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgataataacatctaggatgata 5303029  T
Q  248 ttc 250  Q
    |||    
T  5303030 ttc 5303032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 148 - 250
Target Start/End: Original strand, 27680934 - 27681036
Alignment:
Q  148 tgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatgata 247  Q
    |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  | ||||| ||||||   ||||||||||| ||||||    
T  27680934 tgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgataataacatctaggatgata 27681033  T
Q  248 ttc 250  Q
    |||    
T  27681034 ttc 27681036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 148 - 250
Target Start/End: Original strand, 27690589 - 27690691
Alignment:
Q  148 tgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatgata 247  Q
    |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  | ||||| ||||||   ||||||||||| ||||||    
T  27690589 tgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgataataacatctaggatgata 27690688  T
Q  248 ttc 250  Q
    |||    
T  27690689 ttc 27690691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 148 - 219
Target Start/End: Complemental strand, 52499017 - 52498946
Alignment:
Q  148 tgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaag 219  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  52499017 tgtttcacttaggatgatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaag 52498946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 119 - 210
Target Start/End: Original strand, 3487775 - 3487867
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaaca 210  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  3487775 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaaca 3487867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 119 - 210
Target Start/End: Original strand, 3497098 - 3497190
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaaca 210  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  3497098 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaaca 3497190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 146 - 250
Target Start/End: Complemental strand, 11476809 - 11476705
Alignment:
Q  146 tttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatga 245  Q
    |||||||| ||||||||||| ||||||| |||||||||||||||| |||| |||||||||||||| || ||||| ||||||  |  ||||||||| ||||    
T  11476809 tttgtttcacttaggataatctgtaagaataccatttgatgtaataaaattctaatagtgaaacaacaatgaagagcagtgattgaaacatctaggatga 11476710  T
Q  246 tattc 250  Q
    |||||    
T  11476709 tattc 11476705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 119 - 210
Target Start/End: Complemental strand, 17161154 - 17161062
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaaca 210  Q
    ||||| |||| ||| ||| ||||||| || |||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  17161154 tgaacattctaaacatcagaatgttccatctgtttcacttaggatgatttataagactaccatttgatgtaatcaaatcctaatagtgaaaca 17161062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 146 - 252
Target Start/End: Original strand, 522400 - 522506
Alignment:
Q  146 tttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatga 245  Q
    |||||||| |||||||| ||||||||||||   | || ||||||||||||||||||||||||||||   ||||||||||  || | ||||||||| ||||    
T  522400 tttgtttcacttaggatgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatggaaaacatctaggatga 522499  T
Q  246 tattctt 252  Q
    |||||||    
T  522500 tattctt 522506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 146 - 252
Target Start/End: Original strand, 17421504 - 17421610
Alignment:
Q  146 tttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatga 245  Q
    |||||||| |||||||| ||||||||||||   | ||||||||||||| |||||||||||||||||   ||||||||||  || | ||||||||| ||||    
T  17421504 tttgtttcacttaggatgatttgtaagacttgtaattgatgtaatcaattcctaatagtgaaacatttatgaagtgcagcatggaaaacatctaggatga 17421603  T
Q  246 tattctt 252  Q
    |||||||    
T  17421604 tattctt 17421610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 146 - 252
Target Start/End: Complemental strand, 26458234 - 26458128
Alignment:
Q  146 tttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatga 245  Q
    |||||||| |||||||| ||||||||||||   ||||||||||||||| |||||||||||||||||   |||||||| |  || | ||||||||| ||||    
T  26458234 tttgtttcacttaggatgatttgtaagactcttatttgatgtaatcaactcctaatagtgaaacatttatgaagtgctgcatggaaaacatctaggatga 26458135  T
Q  246 tattctt 252  Q
    |||||||    
T  26458134 tattctt 26458128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 146 - 252
Target Start/End: Complemental strand, 30651447 - 30651341
Alignment:
Q  146 tttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatga 245  Q
    |||||||| |||||||| ||||||||||||   ||||||||||||||||| ||||||| | |||||   ||||||||||  || | ||||||||| ||||    
T  30651447 tttgtttcacttaggatgatttgtaagactcttatttgatgtaatcaaattctaatagaggaacattgatgaagtgcagcatggaaaacatctaggatga 30651348  T
Q  246 tattctt 252  Q
    |||||||    
T  30651347 tattctt 30651341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 146 - 219
Target Start/End: Original strand, 6406004 - 6406077
Alignment:
Q  146 tttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaag 219  Q
    |||||||| |||| ||| |||||||||||| | ||||||||||||||||| |||||||||||||| || |||||    
T  6406004 tttgtttcacttatgatgatttgtaagacttctatttgatgtaatcaaattctaatagtgaaacaacaatgaag 6406077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 210
Target Start/End: Complemental strand, 19918053 - 19917989
Alignment:
Q  146 tttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaaca 210  Q
    |||||||| |||||||| ||||| |||||  ||||||||||||||||| ||||||||||||||||    
T  19918053 tttgtttcacttaggatgatttgcaagacatccatttgatgtaatcaattcctaatagtgaaaca 19917989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 156 - 211
Target Start/End: Complemental strand, 16058120 - 16058065
Alignment:
Q  156 ttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacat 211  Q
    ||||||| |||||||||| |   ||||||||||||||||||||||||||| |||||    
T  16058120 ttaggatgatttgtaagattcttatttgatgtaatcaaatcctaatagtggaacat 16058065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 250
Target Start/End: Original strand, 14600895 - 14600988
Alignment:
Q  157 taggataatttgtaagactaccatttgatgtaatcaaatcctaatagtg-aaacatcattgaagtgcagtgtgtataacatctagaatgatattc 250  Q
    |||||| ||||||||||||   | ||||||||||| ||||||||||||| |||||| |||||||||||||   |  ||||||||| |||||||||    
T  14600895 taggatgatttgtaagacttgtacttgatgtaatc-aatcctaatagtgaaaacataattgaagtgcagtaattgcaacatctaggatgatattc 14600988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 7e-30; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 21542439 - 21542565
Alignment:
Q  124 tttctgaacttcataatgttcatttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgca 223  Q
    ||||||||||||| ||||||| |||||||| |||||||| ||||||||||||  ||||| |||||||||||||||| ||||| ||||||| |||| || |    
T  21542439 tttctgaacttcagaatgttcctttgtttcacttaggattatttgtaagactctcatttaatgtaatcaaatcctagtagtgtaacatcaatgaaatgta 21542538  T
Q  224 gtgtgtataacatctagaatgatattc 250  Q
    || ||| |||||||||| |||||||||    
T  21542539 gtatgtgtaacatctaggatgatattc 21542565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 119 - 250
Target Start/End: Original strand, 55478195 - 55478327
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||    
T  55478195 tgaacattctgaccatcagaatgttccatctgtttcacttaggatgatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacaacaatga 55478294  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||    |||||||||| |||||||||    
T  55478295 agagcagtgatattaacatctaggatgatattc 55478327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 250
Target Start/End: Original strand, 12139 - 12271
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||  | |||    
T  12139 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacaataatga 12238  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||| ||  | |||||||||| |||||||||    
T  12239 agagcaatgattttaacatctaggatgatattc 12271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 250
Target Start/End: Original strand, 1685403 - 1685535
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  | |||    
T  1685403 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatga 1685502  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  1685503 agagcagtgatgataacatctaggatgatattc 1685535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 250
Target Start/End: Original strand, 5655778 - 5655910
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  | |||    
T  5655778 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatga 5655877  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  5655878 agagcagtgatgataacatctaggatgatattc 5655910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 250
Target Start/End: Complemental strand, 8972762 - 8972630
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  | |||    
T  8972762 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatga 8972663  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  8972662 agagcagtgatgataacatctaggatgatattc 8972630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 250
Target Start/End: Complemental strand, 8983317 - 8983185
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  | |||    
T  8983317 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatga 8983218  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  8983217 agagcagtgatgataacatctaggatgatattc 8983185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 250
Target Start/End: Complemental strand, 9537051 - 9536919
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  | |||    
T  9537051 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatga 9536952  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  9536951 agagcagtgatgataacatctaggatgatattc 9536919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 250
Target Start/End: Complemental strand, 9547377 - 9547245
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  | |||    
T  9547377 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatga 9547278  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  9547277 agagcagtgatgataacatctaggatgatattc 9547245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 248
Target Start/End: Original strand, 16335593 - 16335723
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||  | |||    
T  16335593 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacaataatga 16335692  T
Q  218 agtgcagtgtgtataacatctagaatgatat 248  Q
    || ||||||  | ||||| |||| |||||||    
T  16335693 agagcagtgattttaacacctaggatgatat 16335723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 119 - 251
Target Start/End: Original strand, 10012379 - 10012512
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||  |||||||||||||||||||||||||||||||||||||| ||||||||  | |||    
T  10012379 tgaacattctgaccatcagaatgttccatctgtttcacttaggacgatttgtaagactaccatttgatgtaatcaaatcctaatggtgaaacaataatga 10012478  T
Q  218 agtgcagtgtgtataacatctagaatgatattct 251  Q
    || ||||||  | |||||||||| ||||||||||    
T  10012479 agagcagtgattttaacatctaggatgatattct 10012512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 120 - 249
Target Start/End: Original strand, 29709441 - 29709569
Alignment:
Q  120 gaactttctgaacttcataatgttcatttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaag 219  Q
    |||| ||||||||| ||||||||| ||||||||  ||||| ||  ||| ||||||| |||||||||||||| ||||||||||||| |||| | | |||||    
T  29709441 gaaccttctgaact-cataatgttaatttgtttaacttagaatcttttataagacttccatttgatgtaattaaatcctaatagtaaaacgttaatgaag 29709539  T
Q  220 tgcagtgtgtataacatctagaatgatatt 249  Q
    |||| | |||||||||||||| ||||||||    
T  29709540 tgcaatatgtataacatctaggatgatatt 29709569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 119 - 210
Target Start/End: Complemental strand, 4371293 - 4371201
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaaca 210  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  4371293 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaaca 4371201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 119 - 210
Target Start/End: Complemental strand, 4381012 - 4380920
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaaca 210  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  4381012 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaaca 4380920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 119 - 210
Target Start/End: Complemental strand, 6422218 - 6422126
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaaca 210  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  6422218 tgaacattctgatcatcaaaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaaca 6422126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 119 - 250
Target Start/End: Complemental strand, 25432775 - 25432643
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||  | |||    
T  25432775 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctattagtgaaacaataatga 25432676  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||    |||||||||| |||||||||    
T  25432675 agagcagtgatattaacatctaggatgatattc 25432643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 148 - 219
Target Start/End: Original strand, 4024574 - 4024645
Alignment:
Q  148 tgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaag 219  Q
    |||||| |||||||| |||||||||||||||||| |||||||||||||||||||||||||||| || |||||    
T  4024574 tgtttcacttaggatgatttgtaagactaccattagatgtaatcaaatcctaatagtgaaacaacaatgaag 4024645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 148 - 210
Target Start/End: Complemental strand, 6432628 - 6432566
Alignment:
Q  148 tgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaaca 210  Q
    |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  6432628 tgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaaca 6432566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 146 - 252
Target Start/End: Complemental strand, 24793337 - 24793231
Alignment:
Q  146 tttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatga 245  Q
    |||||||| |||||||| ||||| ||||||   |||||||||||||||||||||||||||||||||   ||||||||||  |  | ||||||||| ||||    
T  24793337 tttgtttcacttaggatgatttgcaagactcttatttgatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatagaaaacatctaggatga 24793238  T
Q  246 tattctt 252  Q
    |||||||    
T  24793237 tattctt 24793231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 146 - 252
Target Start/End: Original strand, 49387556 - 49387662
Alignment:
Q  146 tttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatga 245  Q
    |||||||| |||||||| ||||||||||||   | || ||||||||||||||||||||||||||||   ||||||||||  || | ||||||||| ||||    
T  49387556 tttgtttcacttaggatgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatggaaaacatctaggatga 49387655  T
Q  246 tattctt 252  Q
    |||||||    
T  49387656 tattctt 49387662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 146 - 211
Target Start/End: Complemental strand, 17733998 - 17733933
Alignment:
Q  146 tttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacat 211  Q
    |||||||| |||||||||||||||||||||   |||||||||||||||||| ||||||||||||||    
T  17733998 tttgtttcacttaggataatttgtaagactcttatttgatgtaatcaaatcataatagtgaaacat 17733933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 146 - 211
Target Start/End: Complemental strand, 19035267 - 19035202
Alignment:
Q  146 tttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacat 211  Q
    |||||||| |||||||||||||||||||||   |||||||||||||||||| ||||||||||||||    
T  19035267 tttgtttcacttaggataatttgtaagactcttatttgatgtaatcaaatcataatagtgaaacat 19035202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 119 - 219
Target Start/End: Complemental strand, 20491970 - 20491869
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| ||||| || |||||||||||||||||||||||||||||||||| |||||| ||||| || |||    
T  20491970 tgaacattctgaccatcagaatgttccatctgtttcacttagcatgatttgtaagactaccatttgatgtaatcaaatccaaatagtaaaacaacaatga 20491871  T
Q  218 ag 219  Q
    ||    
T  20491870 ag 20491869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 146 - 252
Target Start/End: Original strand, 24873440 - 24873546
Alignment:
Q  146 tttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatga 245  Q
    |||||||| |||||||| ||||||||||||   | || ||||||||||||||||||||||| ||||   ||||||||||  || | ||||||||| ||||    
T  24873440 tttgtttcacttaggatgatttgtaagacttgtaatttatgtaatcaaatcctaatagtgatacatttatgaagtgcagcatggaaaacatctaggatga 24873539  T
Q  246 tattctt 252  Q
    |||||||    
T  24873540 tattctt 24873546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 146 - 252
Target Start/End: Original strand, 13431653 - 13431759
Alignment:
Q  146 tttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatga 245  Q
    |||||||| |||| ||| |||||||||||    ||||||| ||||||| | |||||| ||||| |||| ||||||||||| ||| |||||| ||| ||||    
T  13431653 tttgtttcacttaagatgatttgtaagacccttatttgatataatcaagttctaataatgaaatatcaatgaagtgcagtatgtgtaacatataggatga 13431752  T
Q  246 tattctt 252  Q
    |||||||    
T  13431753 tattctt 13431759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 205 - 252
Target Start/End: Original strand, 8435840 - 8435887
Alignment:
Q  205 gaaacatcattgaagtgcagtgtgtataacatctagaatgatattctt 252  Q
    ||||||||| ||||||| ||||||||| |||||||| |||||||||||    
T  8435840 gaaacatcaatgaagtgtagtgtgtattacatctaggatgatattctt 8435887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 119 - 246
Target Start/End: Complemental strand, 15764 - 15636
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||  | |||    
T  15764 tgaacattctgaccatcagaatgttccatttgtttcacttaggatgatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacaataatga 15665  T
Q  218 agtgcagtgtgtataacatctagaatgat 246  Q
    || ||||||  | |||||||||| |||||    
T  15664 agagcagtgattttaacatctaggatgat 15636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 146 - 250
Target Start/End: Complemental strand, 13709 - 13605
Alignment:
Q  146 tttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatga 245  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||||||||| || ||||| ||||||  | |||||||||| ||||    
T  13709 tttgtttctcttaggatgatttgtaagacttccatttgatgtaatcaaatcgtaatagtgaaacaacaatgaagagcagtgaatgtaacatctaggatga 13610  T
Q  246 tattc 250  Q
    |||||    
T  13609 tattc 13605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 119 - 250
Target Start/End: Original strand, 310171 - 310303
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||  | |||    
T  310171 tgaacattctgaccatcagaatgttccatctgtttcacttaggatgatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacaataatga 310270  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||  | |||||||||| |||||||||    
T  310271 agagcagtgattttaacatctaggatgatattc 310303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 250
Target Start/End: Complemental strand, 216483 - 216390
Alignment:
Q  157 taggataatttgtaagactaccatttgatgtaatcaaatcctaatagtg-aaacatcattgaagtgcagtgtgtataacatctagaatgatattc 250  Q
    |||||| ||||||||||||   | ||||||||||| ||||||||||||| |||||| |||||||||||||   |  ||||||||| |||||||||    
T  216483 taggatgatttgtaagacttgtacttgatgtaatc-aatcctaatagtgaaaacataattgaagtgcagtaattgcaacatctaggatgatattc 216390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 1e-28; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 146 - 250
Target Start/End: Original strand, 23378756 - 23378860
Alignment:
Q  146 tttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatga 245  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||||||||| || ||||| ||||||  | |||||||||| ||||    
T  23378756 tttgtttctcttaggatgatttgtaagacttccatttgatgtaatcaaatcgtaatagtgaaacaacaatgaagagcagtgaatgtaacatctaggatga 23378855  T
Q  246 tattc 250  Q
    |||||    
T  23378856 tattc 23378860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 250
Target Start/End: Original strand, 8765510 - 8765642
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  | |||    
T  8765510 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatga 8765609  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  8765610 agagcagtgatgataacatctaggatgatattc 8765642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 250
Target Start/End: Original strand, 11411254 - 11411386
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  | |||    
T  11411254 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatga 11411353  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  11411354 agagcagtgatgataacatctaggatgatattc 11411386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 250
Target Start/End: Complemental strand, 18361193 - 18361061
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  | |||    
T  18361193 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatga 18361094  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  18361093 agagcagtgatgataacatctaggatgatattc 18361061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 250
Target Start/End: Complemental strand, 21753359 - 21753227
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  | |||    
T  21753359 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatga 21753260  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  21753259 agagcagtgatgataacatctaggatgatattc 21753227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 250
Target Start/End: Complemental strand, 21762646 - 21762514
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  | |||    
T  21762646 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatga 21762547  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  21762546 agagcagtgatgataacatctaggatgatattc 21762514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 250
Target Start/End: Original strand, 26192146 - 26192278
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  | |||    
T  26192146 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatga 26192245  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  26192246 agagcagtgatgataacatctaggatgatattc 26192278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 250
Target Start/End: Original strand, 26202750 - 26202882
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  | |||    
T  26202750 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatga 26202849  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  26202850 agagcagtgatgataacatctaggatgatattc 26202882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 250
Target Start/End: Complemental strand, 27412064 - 27411932
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  | |||    
T  27412064 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatga 27411965  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  27411964 agagcagtgataataacatctaggatgatattc 27411932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 250
Target Start/End: Complemental strand, 32070356 - 32070224
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  | |||    
T  32070356 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatga 32070257  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  32070256 agagcagtgataataacatctaggatgatattc 32070224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 250
Target Start/End: Complemental strand, 33939233 - 33939101
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  | |||    
T  33939233 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatga 33939134  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  33939133 agagcagtgatgataacatctaggatgatattc 33939101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 250
Target Start/End: Complemental strand, 33949633 - 33949501
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  | |||    
T  33949633 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatga 33949534  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  33949533 agagcagtgatgataacatctaggatgatattc 33949501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 146 - 219
Target Start/End: Complemental strand, 31105300 - 31105227
Alignment:
Q  146 tttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaag 219  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  31105300 tttgtttcacttaggatgatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaag 31105227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 119 - 250
Target Start/End: Complemental strand, 18390150 - 18390018
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| |||| |||||||| |||||||||||||||||||||||||||||||||  | |||    
T  18390150 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttctaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatga 18390051  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  18390050 agagcagtgatgataacatctaggatgatattc 18390018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 131 - 252
Target Start/End: Original strand, 19548635 - 19548757
Alignment:
Q  131 acttcataatgtt-catttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgt 229  Q
    ||||||||||||| | |||||||| |||||||| ||||||||||||   |||||||||||||||||||||||||||||||||   |||||||||   ||     
T  19548635 acttcataatgtttcttttgtttcacttaggatgatttgtaagactcttatttgatgtaatcaaatcctaatagtgaaacatttatgaagtgcaacatga 19548734  T
Q  230 ataacatctagaatgatattctt 252  Q
    | ||||||||| |||||||||||    
T  19548735 aaaacatctaggatgatattctt 19548757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 148 - 210
Target Start/End: Complemental strand, 22244600 - 22244538
Alignment:
Q  148 tgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaaca 210  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  22244600 tgtttcacttaggatgatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaaca 22244538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 146 - 252
Target Start/End: Complemental strand, 36316248 - 36316142
Alignment:
Q  146 tttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatga 245  Q
    |||||||| |||||||| ||||||||||||   ||||||||||||||||||||||||||| ||||||  ||||||||||  || | ||||||||| ||||    
T  36316248 tttgtttcacttaggatgatttgtaagactcttatttgatgtaatcaaatcctaatagtggaacatcgatgaagtgcagcatggaaaacatctaggatga 36316149  T
Q  246 tattctt 252  Q
    |||||||    
T  36316148 tattctt 36316142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 146 - 252
Target Start/End: Complemental strand, 20947679 - 20947573
Alignment:
Q  146 tttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatga 245  Q
    |||||||| |||||||| ||||||||||||   | || ||||||||||||||||||||||||||||   ||||||||||  || | ||||||||| ||||    
T  20947679 tttgtttcacttaggatgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatggaaaacatctaggatga 20947580  T
Q  246 tattctt 252  Q
    |||||||    
T  20947579 tattctt 20947573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 146 - 252
Target Start/End: Complemental strand, 20958068 - 20957962
Alignment:
Q  146 tttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatga 245  Q
    |||||||| |||||||| ||||||||||||   | || ||||||||||||||||||||||||||||   ||||||||||  || | ||||||||| ||||    
T  20958068 tttgtttcacttaggatgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatggaaaacatctaggatga 20957969  T
Q  246 tattctt 252  Q
    |||||||    
T  20957968 tattctt 20957962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 225
Target Start/End: Original strand, 205879 - 205948
Alignment:
Q  156 ttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagt-gaaacatcattgaagtgcagt 225  Q
    ||||||| ||||||||||||||  |||||||||||| |||||||||||| || |||| | |||||||||||    
T  205879 ttaggatgatttgtaagactactttttgatgtaatc-aatcctaatagtagatacataactgaagtgcagt 205948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 250
Target Start/End: Original strand, 7995 - 8127
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  | |||    
T  7995 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatga 8094  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  8095 agagcagtgatgataacatctaggatgatattc 8127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 250
Target Start/End: Original strand, 93005 - 93137
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||  | |||    
T  93005 tgaacattctgaccatcagaatgttccatctgtttcacttaggatgatttgtaagactactatttgatgtaatcaaatcctaatagtgaaacaataatga 93104  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||  | |||||||||| |||||||||    
T  93105 agagcagtgattttaacatctaggatgatattc 93137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 250
Target Start/End: Original strand, 234141 - 234273
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  | |||    
T  234141 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatga 234240  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||   ||||||||||| |||||||||    
T  234241 agagcagtgatgataacatctaggatgatattc 234273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0611 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0611
Description:

Target: scaffold0611; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 148 - 250
Target Start/End: Complemental strand, 8256 - 8154
Alignment:
Q  148 tgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatgata 247  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    ||||| ||||||  | |||||||||| ||||||    
T  8256 tgtttcacttaggatgatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacaattatgaagagcagtgattttaacatctaggatgata 8157  T
Q  248 ttc 250  Q
    |||    
T  8156 ttc 8154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 148 - 250
Target Start/End: Original strand, 17469 - 17571
Alignment:
Q  148 tgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatgata 247  Q
    |||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| || | ||| ||||||  | |||||||||| ||||||    
T  17469 tgtttcacttaggatgatttgtaagactaccatttaatgtaatcaaatcctaatagtgaaacaacaataaagagcagtgattttaacatctaggatgata 17568  T
Q  248 ttc 250  Q
    |||    
T  17569 ttc 17571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 252
Target Start/End: Complemental strand, 65602 - 65468
Alignment:
Q  119 tgaactttctgaacttcataatgttcattt-gtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||||||||||||||||| ||| ||||| |||||||| || ||||||| | |||||| ||||||||||||  ||||||||||||||||  ||    
T  65602 tgaacattctgaacttcataatgttccttttgtttcacttaggatgatatgtaagatttccatttcatgtaatcaaatattaatagtgaaacatcaaaga 65503  T
Q  218 agtgcagtgtgtataacatctagaatgatattctt 252  Q
    |||| | ||| | |||||||||| |||||||||||    
T  65502 agtggaatgtttgtaacatctaggatgatattctt 65468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 148 - 250
Target Start/End: Original strand, 74900 - 75002
Alignment:
Q  148 tgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatgata 247  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||  | |||||  |||||  | |||||||||| ||||||    
T  74900 tgtttcacttaggatgatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacaataatgaagatcagtgattttaacatctaggatgata 74999  T
Q  248 ttc 250  Q
    |||    
T  75000 ttc 75002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0690 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0690
Description:

Target: scaffold0690; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 150 - 250
Target Start/End: Original strand, 4395 - 4495
Alignment:
Q  150 tttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatgatatt 249  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||  || ||||| ||||||  | |||||||||| ||||||||    
T  4395 tttcacttaggatgatttgtaagactaccatttgatgtaatcaaatcttaatagtgaaactacaatgaagagcagtgattttaacatctaggatgatatt 4494  T
Q  250 c 250  Q
    |    
T  4495 c 4495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 119 - 226
Target Start/End: Original strand, 55972 - 56080
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| || |||    
T  55972 tgaacattctgaccatcagaatgttccatctgtttcacttaggatgatttgtaagactaccatctgatgtaatcaaatcctaatagtgaaacaacaatga 56071  T
Q  218 agtgcagtg 226  Q
    || ||||||    
T  56072 agagcagtg 56080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 119 - 210
Target Start/End: Original strand, 19528 - 19620
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaaca 210  Q
    ||||| |||||| | ||| ||||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  19528 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaaca 19620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 119 - 250
Target Start/End: Original strand, 21308 - 21440
Alignment:
Q  119 tgaactttctgaacttcataatgttc-atttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattga 217  Q
    ||||| |||||| | ||| ||||||| || ||||||  || |||| |||||||||| ||||| ||||||||||||||||||||||||||||||  | |||    
T  21308 tgaacattctgaccatcagaatgttccatctgtttcatttgggatgatttgtaagaataccaattgatgtaatcaaatcctaatagtgaaacaataatga 21407  T
Q  218 agtgcagtgtgtataacatctagaatgatattc 250  Q
    || ||||||  | |||||||||| |||||||||    
T  21408 agagcagtgattttaacatctaggatgatattc 21440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0764 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0764
Description:

Target: scaffold0764; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 146 - 252
Target Start/End: Original strand, 982 - 1088
Alignment:
Q  146 tttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatga 245  Q
    |||||||| |||||||| ||||||||||||   | || ||||||||||||||||||||||||||||   ||||||||||  || | ||||||||| ||||    
T  982 tttgtttcacttaggatgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatggaaaacatctaggatga 1081  T
Q  246 tattctt 252  Q
    |||||||    
T  1082 tattctt 1088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0313 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0313
Description:

Target: scaffold0313; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 146 - 252
Target Start/End: Complemental strand, 5627 - 5521
Alignment:
Q  146 tttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatga 245  Q
    |||||||| |||||||| ||||||||||||   | || ||||||||||||||||||||||||||||   ||||||||||  || | ||||||||| ||||    
T  5627 tttgtttcacttaggatgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatggaaaacatctaggatga 5528  T
Q  246 tattctt 252  Q
    |||||||    
T  5527 tattctt 5521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0313; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 146 - 252
Target Start/End: Complemental strand, 19784 - 19678
Alignment:
Q  146 tttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatga 245  Q
    |||||||| |||||||| ||||||||||||   | || ||||||||||||||||||||||||||||   ||||||||||  || | ||||||||| ||||    
T  19784 tttgtttcacttaggatgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatttatgaagtgcagcatggaaaacatctaggatga 19685  T
Q  246 tattctt 252  Q
    |||||||    
T  19684 tattctt 19678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 131 - 252
Target Start/End: Original strand, 40758 - 40880
Alignment:
Q  131 acttcataatgttcattt-gtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgt 229  Q
    |||||||||||||| ||| ||||| |||||||| |||||| ||||| |||||||||||||  ||||| | ||| ||||| |||| ||||||||| | ||     
T  40758 acttcataatgttccttttgtttcacttaggatgatttgtgagactcccatttgatgtaaggaaatcttcataatgaaatatcaatgaagtgcaatatga 40857  T
Q  230 ataacatctagaatgatattctt 252  Q
    | ||||||||| |||||||||||    
T  40858 aaaacatctaggatgatattctt 40880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 144 - 252
Target Start/End: Original strand, 198871 - 198979
Alignment:
Q  144 catttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtg-aaacatcattgaagtgcagtgtgtataacatctagaa 242  Q
    |||||||||| |||||||| ||||||||||||   ||||||||||| | ||||||||||||| |||||| | ||||||||||||  |  ||||||||| |    
T  198871 catttgtttcacttaggatgatttgtaagacttgtatttgatgtaaac-aatcctaatagtgaaaacataactgaagtgcagtgattgcaacatctagga 198969  T
Q  243 tgatattctt 252  Q
    ||||||||||    
T  198970 tgatattctt 198979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0535 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 146 - 252
Target Start/End: Original strand, 1102 - 1208
Alignment:
Q  146 tttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatga 245  Q
    |||| ||| |||||||| ||||||||||||   ||||||||||||  | || ||||||||||||||   ||||||||||  || | ||||||||| ||||    
T  1102 tttggttcacttaggatgatttgtaagactcttatttgatgtaattgagtcttaatagtgaaacattgatgaagtgcagcatggaaaacatctaggatga 1201  T
Q  246 tattctt 252  Q
    |||||||    
T  1202 tattctt 1208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0811 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0811
Description:

Target: scaffold0811; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 252
Target Start/End: Original strand, 3713 - 3819
Alignment:
Q  146 tttgtttctcttaggataatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacatcattgaagtgcagtgtgtataacatctagaatga 245  Q
    |||||||| ||||| || ||||||||||||   |||  ||||||||||||| |||||||||||||    |||||||||   || | ||||||||| ||||    
T  3713 tttgtttcacttagtatgatttgtaagactcttattaaatgtaatcaaatcgtaatagtgaaacaatgatgaagtgcatcatggaaaacatctaggatga 3812  T
Q  246 tattctt 252  Q
    |||||||    
T  3813 tattctt 3819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 211
Target Start/End: Original strand, 13145 - 13173
Alignment:
Q  183 gatgtaatcaaatcctaatagtgaaacat 211  Q
    |||||||||||||||||||||||||||||    
T  13145 gatgtaatcaaatcctaatagtgaaacat 13173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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