View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10140A_low_249 (Length: 251)
Name: NF10140A_low_249
Description: NF10140A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10140A_low_249 |
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Alignment Details
Target: chr3 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 23 - 234
Target Start/End: Original strand, 34570946 - 34571157
Alignment:
| Q |
23 |
aacatcctggtcaaatggaccgtcaaaatcaaaaacttccacatacaaaactgatggtggttcttccatagcatcaaactctaatatctctgcatattag |
122 |
Q |
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| T |
34570946 |
aacatcctggtcaaatggaccgtcaaaatcaaaaacttccacatacaaaactgatggtggttcttccatagcatcaaactctaatatctctgcatattag |
34571045 |
T |
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| Q |
123 |
tatataaaaccaatacagaatataagtaaataaacattcaaattgaaacaannnnnnnagcaattaagtggcaagtcagaaggacaaaccattccattga |
222 |
Q |
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| T |
34571046 |
tatataaaaccaatacagaatataagtaaagaaacattcaaattgaaacaatttttttagcaattaagtggcaagtcagaaggacaaaccattccattga |
34571145 |
T |
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| Q |
223 |
ggatctgatgtc |
234 |
Q |
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| T |
34571146 |
ggatctgatgtc |
34571157 |
T |
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