View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10140A_low_261 (Length: 250)
Name: NF10140A_low_261
Description: NF10140A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10140A_low_261 |
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Alignment Details
Target: chr7 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 48484382 - 48484623
Alignment:
| Q |
1 |
acctgatcatgtacaagaaatggaagtttcagtatgtaaaagttcatatgaaatgcatgcttaccttgcaaaaaggaaaacacctgtttctgatttaact |
100 |
Q |
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| T |
48484382 |
acctgatcatgtacaagaaatggaagtttcagtatgtaaaagttcatatgaaatgcatgcttaccttgcaaaaaggaaaacacctgtttctgatttaact |
48484481 |
T |
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| Q |
101 |
tcatgggaattccagcttggggattgtgttccgtgatctgaagaaatttgttttgttatttcaaaaatgagaaagaagcgcagaagtattatggagatat |
200 |
Q |
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| T |
48484482 |
tcatgggaattccagcttggggattgtgttccgtgatctgaagaaatttgttttgttatttcaaaaatgagaaagaagcgcagaaatattatggagatat |
48484581 |
T |
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| Q |
201 |
gaagacacggtacacacaacactacaggactatatctttgat |
242 |
Q |
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| T |
48484582 |
gaagacacggtacacacaacactgcaggactatatctttgat |
48484623 |
T |
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