View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10140A_low_296 (Length: 247)

Name: NF10140A_low_296
Description: NF10140A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10140A_low_296
NF10140A_low_296
[»] chr6 (43 HSPs)
chr6 (6-180)||(16231816-16231990)
chr6 (6-180)||(18086981-18087155)
chr6 (6-180)||(13620952-13621126)
chr6 (6-180)||(23977693-23977867)
chr6 (28-131)||(32276944-32277046)
chr6 (28-119)||(16300161-16300252)
chr6 (28-137)||(4991037-4991147)
chr6 (95-180)||(16556386-16556471)
chr6 (95-180)||(16632942-16633027)
chr6 (95-180)||(22225985-22226070)
chr6 (28-120)||(19629314-19629405)
chr6 (95-180)||(10488623-10488708)
chr6 (95-180)||(16376620-16376705)
chr6 (95-180)||(16383944-16384029)
chr6 (115-180)||(35015425-35015490)
chr6 (115-175)||(19983559-19983619)
chr6 (177-232)||(18086802-18086857)
chr6 (28-144)||(18381855-18381972)
chr6 (177-232)||(1556227-1556282)
chr6 (177-232)||(13620773-13620828)
chr6 (177-232)||(16232114-16232169)
chr6 (177-232)||(19610240-19610295)
chr6 (177-232)||(22251545-22251600)
chr6 (28-136)||(25651203-25651312)
chr6 (177-232)||(10488921-10488976)
chr6 (177-232)||(16376352-16376407)
chr6 (177-232)||(16383676-16383731)
chr6 (28-122)||(19854135-19854230)
chr6 (177-232)||(22225717-22225772)
chr6 (177-224)||(23977999-23978046)
chr6 (177-232)||(16556118-16556173)
chr6 (177-232)||(16632674-16632729)
chr6 (177-228)||(16825727-16825778)
chr6 (177-232)||(19299459-19299514)
chr6 (28-137)||(22361937-22362047)
chr6 (28-132)||(29605420-29605525)
chr6 (28-136)||(34966833-34966942)
chr6 (28-87)||(18398954-18399013)
chr6 (28-122)||(33324673-33324768)
chr6 (28-122)||(35136184-35136279)
chr6 (28-132)||(33538541-33538646)
chr6 (33-132)||(18629788-18629888)
chr6 (177-225)||(25175792-25175840)
[»] chr3 (48 HSPs)
chr3 (6-180)||(18910917-18911091)
chr3 (28-180)||(16934154-16934306)
chr3 (28-131)||(11477371-11477474)
chr3 (28-131)||(8268925-8269027)
chr3 (28-131)||(8276025-8276127)
chr3 (28-132)||(9303280-9303385)
chr3 (28-131)||(14284933-14285036)
chr3 (95-180)||(49232360-49232445)
chr3 (95-180)||(1467986-1468071)
chr3 (177-232)||(18911215-18911270)
chr3 (115-180)||(17956252-17956317)
chr3 (116-180)||(16821063-16821127)
chr3 (177-232)||(12264771-12264826)
chr3 (177-232)||(25058961-25059016)
chr3 (177-232)||(49232658-49232713)
chr3 (177-229)||(22275434-22275486)
chr3 (177-232)||(18897023-18897078)
chr3 (177-232)||(54651679-54651734)
chr3 (28-132)||(6228797-6228902)
chr3 (28-132)||(12952934-12953039)
chr3 (177-232)||(1467718-1467773)
chr3 (177-232)||(15468319-15468374)
chr3 (177-232)||(44229207-44229262)
chr3 (28-125)||(4162377-4162475)
chr3 (177-228)||(5228539-5228589)
chr3 (28-87)||(12488898-12488957)
chr3 (177-232)||(12812063-12812118)
chr3 (177-228)||(12902069-12902120)
chr3 (28-87)||(38811180-38811239)
chr3 (177-228)||(41270301-41270352)
chr3 (28-122)||(41661545-41661640)
chr3 (141-180)||(45581397-45581436)
chr3 (177-228)||(55316445-55316496)
chr3 (28-129)||(11329133-11329235)
chr3 (28-137)||(34559864-34559974)
chr3 (135-180)||(28557972-28558017)
chr3 (136-173)||(54038569-54038606)
chr3 (177-217)||(15936614-15936654)
chr3 (29-124)||(47784920-47785016)
chr3 (28-122)||(3576610-3576705)
chr3 (177-219)||(15615068-15615110)
chr3 (28-125)||(17191518-17191616)
chr3 (31-132)||(17204670-17204772)
chr3 (30-137)||(1990767-1990876)
chr3 (28-124)||(14059385-14059482)
chr3 (28-136)||(31412505-31412614)
chr3 (177-209)||(15938456-15938488)
chr3 (28-80)||(17139531-17139583)
[»] chr8 (46 HSPs)
chr8 (6-180)||(13721086-13721260)
chr8 (6-180)||(16873209-16873383)
chr8 (28-180)||(3431461-3431613)
chr8 (28-131)||(22886298-22886402)
chr8 (28-131)||(18612379-18612481)
chr8 (28-131)||(18619284-18619386)
chr8 (28-131)||(21494629-21494732)
chr8 (95-180)||(15319406-15319491)
chr8 (95-180)||(15499775-15499860)
chr8 (100-180)||(22006510-22006590)
chr8 (28-131)||(22147411-22147513)
chr8 (95-180)||(13662512-13662597)
chr8 (95-180)||(271607-271692)
chr8 (95-180)||(644228-644313)
chr8 (95-180)||(829963-830048)
chr8 (177-232)||(13720907-13720962)
chr8 (115-180)||(24717130-24717195)
chr8 (95-163)||(22089041-22089109)
chr8 (177-232)||(22006237-22006292)
chr8 (28-144)||(23837156-23837273)
chr8 (177-232)||(13662244-13662299)
chr8 (36-144)||(2544909-2545016)
chr8 (177-232)||(271339-271394)
chr8 (177-232)||(644526-644581)
chr8 (177-232)||(830261-830316)
chr8 (177-232)||(16195453-16195508)
chr8 (177-224)||(16873030-16873077)
chr8 (28-122)||(38635820-38635915)
chr8 (28-137)||(26011459-26011569)
chr8 (28-132)||(27233239-27233344)
chr8 (28-139)||(21198324-21198436)
chr8 (28-123)||(38533628-38533724)
chr8 (177-232)||(15319138-15319193)
chr8 (177-232)||(15499507-15499562)
chr8 (177-232)||(22088773-22088828)
chr8 (28-137)||(5854579-5854689)
chr8 (28-132)||(37653788-37653891)
chr8 (135-180)||(39115041-39115087)
chr8 (28-136)||(18041704-18041813)
chr8 (28-132)||(18261643-18261748)
chr8 (28-132)||(33611225-33611330)
chr8 (177-228)||(30120948-30120999)
chr8 (135-180)||(4233826-4233872)
chr8 (135-180)||(17502112-17502158)
chr8 (28-87)||(33528442-33528500)
chr8 (28-80)||(39446938-39446990)
[»] chr4 (36 HSPs)
chr4 (6-180)||(7132223-7132397)
chr4 (6-180)||(20000647-20000821)
chr4 (28-131)||(8044913-8045017)
chr4 (28-131)||(14996100-14996202)
chr4 (28-131)||(19697553-19697655)
chr4 (28-131)||(19708138-19708240)
chr4 (28-137)||(16522783-16522893)
chr4 (28-137)||(9295659-9295769)
chr4 (94-180)||(18168894-18168980)
chr4 (115-180)||(5682795-5682860)
chr4 (115-180)||(25119476-25119541)
chr4 (177-232)||(7132044-7132099)
chr4 (51-131)||(32460880-32460960)
chr4 (177-232)||(8378373-8378428)
chr4 (177-232)||(18169192-18169247)
chr4 (28-122)||(15044808-15044903)
chr4 (28-122)||(15109521-15109616)
chr4 (177-232)||(19020708-19020763)
chr4 (177-232)||(18248440-18248495)
chr4 (177-224)||(20000953-20001000)
chr4 (33-110)||(9795207-9795283)
chr4 (28-132)||(40905105-40905210)
chr4 (177-232)||(15287224-15287279)
chr4 (177-232)||(15294333-15294388)
chr4 (177-228)||(47357880-47357931)
chr4 (95-131)||(19020459-19020495)
chr4 (28-130)||(15013454-15013557)
chr4 (177-232)||(17145636-17145691)
chr4 (28-122)||(38764689-38764784)
chr4 (28-122)||(41256541-41256636)
chr4 (28-137)||(7964883-7964993)
chr4 (135-180)||(15213877-15213923)
chr4 (28-136)||(18238329-18238438)
chr4 (28-124)||(19821948-19822045)
chr4 (28-136)||(54398349-54398458)
chr4 (28-139)||(14901195-14901307)
[»] chr2 (46 HSPs)
chr2 (6-180)||(12636026-12636200)
chr2 (6-180)||(8943770-8943944)
chr2 (6-180)||(12641800-12641974)
chr2 (6-180)||(42178127-42178301)
chr2 (6-180)||(3798761-3798935)
chr2 (28-131)||(28031419-28031523)
chr2 (28-131)||(15633186-15633288)
chr2 (28-109)||(25213042-25213123)
chr2 (95-175)||(24686028-24686108)
chr2 (28-130)||(17204303-17204406)
chr2 (28-137)||(24826899-24827009)
chr2 (95-180)||(12728316-12728401)
chr2 (95-180)||(34824399-34824484)
chr2 (94-180)||(22274645-22274731)
chr2 (95-180)||(11231585-11231670)
chr2 (94-175)||(22283883-22283964)
chr2 (95-180)||(22513432-22513517)
chr2 (95-180)||(28776054-28776139)
chr2 (177-232)||(8944068-8944123)
chr2 (28-124)||(3413-3509)
chr2 (177-232)||(12635847-12635902)
chr2 (177-232)||(12728614-12728669)
chr2 (177-232)||(34824697-34824752)
chr2 (177-232)||(42177948-42178003)
chr2 (28-137)||(19433504-19433614)
chr2 (177-232)||(21142117-21142172)
chr2 (65-130)||(22256270-22256332)
chr2 (177-232)||(23778024-23778079)
chr2 (177-224)||(3798582-3798629)
chr2 (177-232)||(11231317-11231372)
chr2 (177-224)||(12641621-12641668)
chr2 (177-232)||(16935815-16935870)
chr2 (177-232)||(17006475-17006530)
chr2 (177-232)||(22513164-22513219)
chr2 (177-232)||(24685760-24685815)
chr2 (177-232)||(28775786-28775841)
chr2 (28-139)||(25305408-25305520)
chr2 (177-228)||(19886636-19886687)
chr2 (28-136)||(67958-68067)
chr2 (28-136)||(23821777-23821886)
chr2 (28-136)||(23830856-23830965)
chr2 (28-124)||(28974027-28974124)
chr2 (190-232)||(7507844-7507886)
chr2 (135-180)||(22775457-22775503)
chr2 (135-180)||(22780835-22780881)
chr2 (28-137)||(24884651-24884761)
[»] chr7 (41 HSPs)
chr7 (6-180)||(15927492-15927666)
chr7 (6-180)||(14251056-14251230)
chr7 (6-180)||(18980179-18980353)
chr7 (6-180)||(13758294-13758468)
chr7 (28-180)||(371012-371164)
chr7 (95-176)||(15951038-15951119)
chr7 (117-180)||(1937270-1937333)
chr7 (95-180)||(7822652-7822737)
chr7 (95-180)||(7829963-7830048)
chr7 (95-180)||(27101884-27101969)
chr7 (95-180)||(27109232-27109317)
chr7 (95-180)||(27176357-27176442)
chr7 (95-180)||(38783976-38784061)
chr7 (28-136)||(13377495-13377604)
chr7 (177-232)||(15950770-15950825)
chr7 (177-232)||(18980000-18980055)
chr7 (28-144)||(17224110-17224227)
chr7 (177-232)||(14250877-14250932)
chr7 (177-232)||(15760093-15760148)
chr7 (177-232)||(15927790-15927845)
chr7 (177-232)||(7822950-7823005)
chr7 (177-232)||(7830261-7830316)
chr7 (177-224)||(13758600-13758647)
chr7 (177-232)||(27101616-27101671)
chr7 (177-232)||(27108964-27109019)
chr7 (177-232)||(27176655-27176710)
chr7 (177-232)||(38783708-38783763)
chr7 (135-180)||(32494490-32494535)
chr7 (177-228)||(2437683-2437734)
chr7 (177-228)||(13910999-13911050)
chr7 (28-122)||(20583726-20583821)
chr7 (28-129)||(15358770-15358872)
chr7 (28-137)||(48356609-48356719)
chr7 (178-228)||(48622646-48622696)
chr7 (177-217)||(18253822-18253862)
chr7 (177-228)||(10989635-10989686)
chr7 (28-87)||(16915100-16915159)
chr7 (28-122)||(28390292-28390387)
chr7 (63-132)||(14940723-14940793)
chr7 (63-132)||(15368316-15368386)
chr7 (28-76)||(13274814-13274862)
[»] chr5 (45 HSPs)
chr5 (6-180)||(10778128-10778302)
chr5 (6-180)||(23514485-23514659)
chr5 (28-180)||(9730563-9730715)
chr5 (28-131)||(7528872-7528975)
chr5 (28-137)||(109013-109123)
chr5 (28-137)||(16105608-16105718)
chr5 (95-180)||(1219767-1219852)
chr5 (95-180)||(22883331-22883416)
chr5 (28-131)||(17909478-17909580)
chr5 (95-180)||(21932628-21932713)
chr5 (95-180)||(21938798-21938883)
chr5 (95-180)||(35581960-35582045)
chr5 (95-180)||(36990017-36990102)
chr5 (177-232)||(1219499-1219554)
chr5 (177-232)||(10777949-10778004)
chr5 (177-232)||(23514783-23514838)
chr5 (28-136)||(23493885-23493994)
chr5 (177-232)||(11212044-11212099)
chr5 (177-232)||(17471567-17471622)
chr5 (177-232)||(22883063-22883118)
chr5 (177-228)||(35791077-35791128)
chr5 (177-228)||(7425550-7425601)
chr5 (177-232)||(21932360-21932415)
chr5 (177-232)||(21938530-21938585)
chr5 (177-232)||(35582258-35582313)
chr5 (28-136)||(3673828-3673937)
chr5 (177-228)||(12600-12651)
chr5 (30-136)||(5451017-5451124)
chr5 (177-228)||(25426854-25426905)
chr5 (177-232)||(36989749-36989804)
chr5 (28-134)||(23981688-23981794)
chr5 (28-124)||(7728398-7728495)
chr5 (30-87)||(29917981-29918038)
chr5 (28-136)||(11337358-11337465)
chr5 (177-228)||(4199960-4200011)
chr5 (28-122)||(6456604-6456699)
chr5 (177-228)||(18777967-18778018)
chr5 (177-228)||(19500125-19500176)
chr5 (177-228)||(21073570-21073621)
chr5 (177-228)||(22366456-22366507)
chr5 (28-87)||(26559987-26560046)
chr5 (135-180)||(28902140-28902186)
chr5 (135-180)||(28938535-28938581)
chr5 (28-124)||(1168376-1168473)
chr5 (28-136)||(19873810-19873919)
[»] chr1 (23 HSPs)
chr1 (6-180)||(17148491-17148665)
chr1 (28-180)||(21650220-21650372)
chr1 (95-180)||(18060005-18060090)
chr1 (95-180)||(17004562-17004647)
chr1 (95-180)||(38055338-38055423)
chr1 (177-232)||(46523611-46523666)
chr1 (115-180)||(44035238-44035303)
chr1 (28-144)||(20177133-20177250)
chr1 (177-232)||(18059737-18059792)
chr1 (177-232)||(17004860-17004915)
chr1 (177-224)||(17148797-17148844)
chr1 (177-228)||(22228034-22228085)
chr1 (177-228)||(22232731-22232782)
chr1 (28-87)||(36356465-36356524)
chr1 (28-144)||(13377012-13377129)
chr1 (28-144)||(41229111-41229228)
chr1 (177-228)||(5072363-5072414)
chr1 (177-232)||(19962478-19962533)
chr1 (177-228)||(18601093-18601144)
chr1 (32-122)||(21194994-21195085)
chr1 (141-180)||(21859214-21859253)
chr1 (135-180)||(16656587-16656633)
chr1 (30-122)||(49997455-49997548)
[»] scaffold0615 (1 HSPs)
scaffold0615 (28-130)||(6396-6498)
[»] scaffold0029 (1 HSPs)
scaffold0029 (28-131)||(50028-50131)
[»] scaffold0335 (1 HSPs)
scaffold0335 (28-132)||(5761-5865)
[»] scaffold0173 (1 HSPs)
scaffold0173 (28-131)||(5194-5296)
[»] scaffold0207 (1 HSPs)
scaffold0207 (36-131)||(17673-17768)
[»] scaffold0162 (1 HSPs)
scaffold0162 (28-119)||(11730-11820)
[»] scaffold0028 (1 HSPs)
scaffold0028 (28-137)||(130521-130631)
[»] scaffold0107 (4 HSPs)
scaffold0107 (95-180)||(39570-39655)
scaffold0107 (95-180)||(31233-31318)
scaffold0107 (177-232)||(39868-39923)
scaffold0107 (177-232)||(31531-31586)
[»] scaffold0076 (2 HSPs)
scaffold0076 (95-180)||(39027-39112)
scaffold0076 (177-232)||(39325-39380)
[»] scaffold0023 (4 HSPs)
scaffold0023 (95-180)||(154254-154339)
scaffold0023 (177-232)||(153986-154041)
scaffold0023 (177-228)||(169887-169938)
scaffold0023 (177-228)||(36319-36370)
[»] scaffold0001 (1 HSPs)
scaffold0001 (28-131)||(165146-165245)
[»] scaffold0213 (2 HSPs)
scaffold0213 (95-173)||(29093-29171)
scaffold0213 (177-232)||(29384-29439)
[»] scaffold0184 (1 HSPs)
scaffold0184 (115-180)||(31548-31613)
[»] scaffold0078 (1 HSPs)
scaffold0078 (115-180)||(41231-41296)
[»] scaffold0118 (1 HSPs)
scaffold0118 (51-131)||(34597-34677)
[»] scaffold0686 (1 HSPs)
scaffold0686 (115-180)||(6351-6416)
[»] scaffold0016 (3 HSPs)
scaffold0016 (115-180)||(162447-162512)
scaffold0016 (115-180)||(166525-166590)
scaffold0016 (30-144)||(116687-116802)
[»] scaffold1500 (2 HSPs)
scaffold1500 (6-66)||(1672-1732)
scaffold1500 (177-232)||(1493-1548)
[»] scaffold0369 (1 HSPs)
scaffold0369 (177-232)||(3944-3999)
[»] scaffold0092 (1 HSPs)
scaffold0092 (177-228)||(10727-10778)
[»] scaffold0970 (1 HSPs)
scaffold0970 (28-136)||(2421-2530)
[»] scaffold0342 (2 HSPs)
scaffold0342 (117-180)||(721-783)
scaffold0342 (28-136)||(5906-6015)
[»] scaffold0191 (1 HSPs)
scaffold0191 (177-232)||(7435-7490)
[»] scaffold0139 (1 HSPs)
scaffold0139 (177-228)||(21091-21142)
[»] scaffold0020 (1 HSPs)
scaffold0020 (28-122)||(107991-108085)
[»] scaffold0077 (2 HSPs)
scaffold0077 (135-180)||(15910-15955)
scaffold0077 (28-132)||(6514-6619)
[»] scaffold0053 (1 HSPs)
scaffold0053 (28-144)||(77019-77136)
[»] scaffold0761 (1 HSPs)
scaffold0761 (177-232)||(1554-1609)
[»] scaffold0529 (1 HSPs)
scaffold0529 (177-228)||(3188-3239)
[»] scaffold0521 (2 HSPs)
scaffold0521 (28-122)||(11074-11169)
scaffold0521 (135-180)||(10877-10922)
[»] scaffold0467 (1 HSPs)
scaffold0467 (177-228)||(10318-10369)
[»] scaffold0387 (1 HSPs)
scaffold0387 (28-122)||(1118-1213)
[»] scaffold0383 (2 HSPs)
scaffold0383 (177-232)||(2614-2669)
scaffold0383 (31-136)||(7137-7243)
[»] scaffold0066 (2 HSPs)
scaffold0066 (177-232)||(45252-45307)
scaffold0066 (177-232)||(54638-54693)
[»] scaffold0032 (1 HSPs)
scaffold0032 (33-144)||(13472-13582)
[»] scaffold0022 (1 HSPs)
scaffold0022 (177-232)||(5191-5246)
[»] scaffold0150 (1 HSPs)
scaffold0150 (28-137)||(28501-28611)
[»] scaffold0080 (1 HSPs)
scaffold0080 (28-137)||(43970-44080)
[»] scaffold0447 (2 HSPs)
scaffold0447 (28-136)||(4529-4638)
scaffold0447 (28-136)||(9143-9252)
[»] scaffold0075 (1 HSPs)
scaffold0075 (28-144)||(4899-5016)
[»] scaffold0039 (1 HSPs)
scaffold0039 (135-180)||(19345-19390)
[»] scaffold0034 (4 HSPs)
scaffold0034 (135-180)||(40446-40491)
scaffold0034 (135-180)||(45929-45974)
scaffold0034 (31-87)||(40674-40730)
scaffold0034 (135-175)||(79632-79672)
[»] scaffold0017 (1 HSPs)
scaffold0017 (177-230)||(54098-54151)
[»] scaffold0012 (1 HSPs)
scaffold0012 (180-232)||(34140-34192)
[»] scaffold1711 (1 HSPs)
scaffold1711 (177-228)||(1279-1330)
[»] scaffold0892 (1 HSPs)
scaffold0892 (177-228)||(3639-3690)
[»] scaffold0148 (1 HSPs)
scaffold0148 (28-122)||(37538-37633)
[»] scaffold0193 (1 HSPs)
scaffold0193 (28-129)||(4578-4680)
[»] scaffold0009 (1 HSPs)
scaffold0009 (28-137)||(69422-69532)
[»] scaffold0670 (1 HSPs)
scaffold0670 (28-136)||(7847-7956)
[»] scaffold0253 (2 HSPs)
scaffold0253 (28-132)||(7372-7477)
scaffold0253 (28-132)||(16797-16902)
[»] scaffold0243 (1 HSPs)
scaffold0243 (28-136)||(2488-2597)
[»] scaffold0103 (1 HSPs)
scaffold0103 (135-180)||(33429-33474)
[»] scaffold0013 (1 HSPs)
scaffold0013 (28-144)||(35437-35553)
[»] scaffold0065 (1 HSPs)
scaffold0065 (32-136)||(68058-68162)
[»] scaffold0026 (2 HSPs)
scaffold0026 (177-217)||(107983-108023)
scaffold0026 (51-136)||(90039-90125)
[»] scaffold0598 (1 HSPs)
scaffold0598 (28-122)||(3232-3327)
[»] scaffold0516 (1 HSPs)
scaffold0516 (177-220)||(12106-12149)
[»] scaffold0008 (1 HSPs)
scaffold0008 (177-228)||(31650-31701)
[»] scaffold1204 (1 HSPs)
scaffold1204 (135-180)||(344-390)
[»] scaffold1272 (1 HSPs)
scaffold1272 (28-132)||(279-384)
[»] scaffold0833 (1 HSPs)
scaffold0833 (28-137)||(3265-3374)
[»] scaffold0610 (1 HSPs)
scaffold0610 (28-80)||(748-800)
[»] scaffold0095 (1 HSPs)
scaffold0095 (28-80)||(33900-33952)
[»] scaffold0003 (1 HSPs)
scaffold0003 (54-125)||(147530-147602)


Alignment Details
Target: chr6 (Bit Score: 159; Significance: 9e-85; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 6 - 180
Target Start/End: Complemental strand, 16231990 - 16231816
Alignment:
Q  6 aatgagatggacatcatatgtcattgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatga 105  Q
    ||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16231990 aatgagatgtaaatcatatgtaattgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatga 16231891  T
Q  106 gaaataagatgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16231890 gaaataagatgttgttggtggttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 16231816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 6 - 180
Target Start/End: Original strand, 18086981 - 18087155
Alignment:
Q  6 aatgagatggacatcatatgtcattgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatga 105  Q
    ||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  18086981 aatgagatgtaaatcatatgtaattgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatatatcataattgttgatga 18087080  T
Q  106 gaaataagatgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18087081 gaaataagatgttggtggtggttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 18087155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 6 - 180
Target Start/End: Original strand, 13620952 - 13621126
Alignment:
Q  6 aatgagatggacatcatatgtcattgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatga 105  Q
    ||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  13620952 aatgagatgtaaatcatatgtaattgatgttgttgttgctgagatatgttgttgattatgaattatgacttgggtgttcatataccataattgttgatga 13621051  T
Q  106 gaaataagatgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    | ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  13621052 gcaataagatgttgttggtggttttgtgaaattaatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 13621126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 6 - 180
Target Start/End: Complemental strand, 23977867 - 23977693
Alignment:
Q  6 aatgagatggacatcatatgtcattgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatga 105  Q
    ||||||||| | ||||||||| ||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||    
T  23977867 aatgagatgtaaatcatatgtaattgatgttgttgttgctgagatatgttgttgagtatgatttgaggcttgggtgttcatataccataattgttgatga 23977768  T
Q  106 gaaataagatgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    ||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  23977767 gaaataagatgttattggtggttttgtgaaattggtgaagttgagttaagtgttcatgtgaaggaccaaattgaa 23977693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 28 - 131
Target Start/End: Original strand, 32276944 - 32277046
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatgagaaataagatgttgttggttgt 127  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||| ||||||| |||||||||||||| ||||||||||    
T  32276944 attgatgttgttgttgctgagatatgttgttgtttatgatt-atggcttgggtgttcatatatcatgattgttggtgagaaataagatgctgttggttgt 32277042  T
Q  128 tttg 131  Q
    ||||    
T  32277043 tttg 32277046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 28 - 119
Target Start/End: Original strand, 16300161 - 16300252
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatgagaaataagatgttg 119  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||    
T  16300161 attgatgttgttgttgctgagatatgttgttgtatatgatttatggcttgggtgttcatatatcatgattgttgatgaaaaataagatgttg 16300252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 28 - 137
Target Start/End: Complemental strand, 4991147 - 4991037
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatgag-aaataagatgttgttggttg 126  Q
    |||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||| ||| ||||||| |||| |||| || |||||||||| |    
T  4991147 attgatgttgttgttgctgagatatgttgttgatcatgaattttggcttgggtgttcatatatcatgattgttgttgagaaaatgagttgttgttggtgg 4991048  T
Q  127 ttttgtgaaat 137  Q
    |||||| ||||    
T  4991047 ttttgtaaaat 4991037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 95 - 180
Target Start/End: Original strand, 16556386 - 16556471
Alignment:
Q  95 attgttgatgagaaataagatgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    |||| |||||||||||||  |||||||||| |||||||||||||| | ||||||||||||||||||||||||||||||||| ||||    
T  16556386 attgatgatgagaaataaattgttgttggtggttttgtgaaattggtaaagttgagttaagtgttcatgtgaaggaccaaaatgaa 16556471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 95 - 180
Target Start/End: Original strand, 16632942 - 16633027
Alignment:
Q  95 attgttgatgagaaataagatgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    |||| |||||||||||||  |||||||||| |||||||||||||| | ||||||||||||||||||||||||||||||||| ||||    
T  16632942 attgatgatgagaaataaattgttgttggtggttttgtgaaattggtaaagttgagttaagtgttcatgtgaaggaccaaaatgaa 16633027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 95 - 180
Target Start/End: Original strand, 22225985 - 22226070
Alignment:
Q  95 attgttgatgagaaataagatgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    |||| |||||||||||||  | |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  22225985 attgatgatgagaaataaattcttgttggtggttttgtgaaattggtgaagttgagttaagtgttcatgtgaaggaccaaaatgaa 22226070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 28 - 120
Target Start/End: Complemental strand, 19629405 - 19629314
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatgagaaataagatgttgt 120  Q
    |||||||||||||||||||||| ||||||||| |||||||| |||||||||||||||||||| ||| ||||||| |||||||| || ||||||    
T  19629405 attgatgttgttgttgctgagacatgttgttgtttatgatt-atggcttgggtgttcatatatcatgattgttggtgagaaatgagttgttgt 19629314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 95 - 180
Target Start/End: Complemental strand, 10488708 - 10488623
Alignment:
Q  95 attgttgatgagaaataagatgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    |||| |||||||||||||  |||||||| | |||||||||||||  ||||||||||||||||||||||||||||||||||| ||||    
T  10488708 attgatgatgagaaataaattgttgttgatggttttgtgaaattagtgaagttgagttaagtgttcatgtgaaggaccaaaatgaa 10488623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 95 - 180
Target Start/End: Original strand, 16376620 - 16376705
Alignment:
Q  95 attgttgatgagaaataagatgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    |||| |||||||||||||  |||||||| | |||||||||||||  ||||||||||||||||||||||||||||||||||| ||||    
T  16376620 attgatgatgagaaataaattgttgttgatggttttgtgaaattagtgaagttgagttaagtgttcatgtgaaggaccaaaatgaa 16376705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 95 - 180
Target Start/End: Original strand, 16383944 - 16384029
Alignment:
Q  95 attgttgatgagaaataagatgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    |||| |||||||||||||  |||||||| | |||||||||||||  ||||||||||||||||||||||||||||||||||| ||||    
T  16383944 attgatgatgagaaataaattgttgttgatggttttgtgaaattagtgaagttgagttaagtgttcatgtgaaggaccaaaatgaa 16384029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 115 - 180
Target Start/End: Original strand, 35015425 - 35015490
Alignment:
Q  115 tgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  35015425 tgttgttggtggttttgtgaaattggtgaagttgagttaagtgttcatgtgaaggaccaaaatgaa 35015490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 115 - 175
Target Start/End: Original strand, 19983559 - 19983619
Alignment:
Q  115 tgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaa 175  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  19983559 tgttgttggtggttttgtgaaattggtgaagttgagttaagtgttcatgtgaaggaccaaa 19983619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 18086802 - 18086857
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  18086802 tgaaaatgggttgatgaacaattgttgctaaattcgtgctcttgttgtgatgctat 18086857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 144
Target Start/End: Original strand, 18381855 - 18381972
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataatt-gttgatgagaaataagatgttgttggttg 126  Q
    |||||||||||||||||| ||  ||||||||| | |||||| ||||||||||| ||||||   ||| ||| ||||||||||||| || |||||||||| |    
T  18381855 attgatgttgttgttgctaagtgatgttgttgttgatgattcatggcttgggtattcataattcatgatttgttgatgagaaatgagttgttgttggtgg 18381954  T
Q  127 ttttgtgaaattgatgaa 144  Q
    ||||||||||||| ||||    
T  18381955 ttttgtgaaattggtgaa 18381972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 1556282 - 1556227
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  1556282 tgaaaatgggttgatgaacaattgttgctaaattcgtgctcttgctgtgatgctat 1556227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 13620773 - 13620828
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  13620773 tgaaaatgggttgatgaacaattgttgctaaattcgtgctcttgttgtaatgctat 13620828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 16232169 - 16232114
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  16232169 tgaaaatgggttgatgaacaattgttgctaaattcgtgctcttgctgtgatgctat 16232114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 19610295 - 19610240
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    ||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||    
T  19610295 tgaaaatgggttgatgaacaattattgctaaattcgtgctcttgctgtgatgctat 19610240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 22251545 - 22251600
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    ||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||    
T  22251545 tgaaaatgggttgatgaacaattgttgttaaattcgtgctcttgctgtgatgctat 22251600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 136
Target Start/End: Complemental strand, 25651312 - 25651203
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataatt-gttgatgagaaataagatgttgttggttg 126  Q
    |||||||||||||||||| ||  || |||||| | |||||| |||||||||||||||||| | ||| ||| | ||||||||| |||| |||||||| | |    
T  25651312 attgatgttgttgttgctaagtgatattgttgttgatgattcatggcttgggtgttcataaatcatgattggatgatgagaattaagttgttgttgttgg 25651213  T
Q  127 ttttgtgaaa 136  Q
    ||||||||||    
T  25651212 ttttgtgaaa 25651203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 10488976 - 10488921
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    ||||||||||||| ||||||||||||| |||||| ||||||||| |||||||||||    
T  10488976 tgaaaatgggttggtgaacaattgttgttaaattcgtgctcttgctgtgatgctat 10488921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 16376352 - 16376407
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    ||||||||||||| ||||||||||||| |||||| ||||||||| |||||||||||    
T  16376352 tgaaaatgggttggtgaacaattgttgttaaattcgtgctcttgctgtgatgctat 16376407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 16383676 - 16383731
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    ||||||||||||| ||||||||||||| |||||| ||||||||| |||||||||||    
T  16383676 tgaaaatgggttggtgaacaattgttgttaaattcgtgctcttgctgtgatgctat 16383731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 122
Target Start/End: Complemental strand, 19854230 - 19854135
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttg 122  Q
    |||||||||||||||||| ||| || |||||| | |||||| || ||||||||||||||| | ||| ||||| ||||||||||| || ||||||||    
T  19854230 attgatgttgttgttgctaagagatattgttgttgatgattcatagcttgggtgttcataaatcatgaattgatgatgagaaatgagttgttgttg 19854135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 22225717 - 22225772
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    ||||||||||||||||||||||||||| |||||| ||||||||  |||||||||||    
T  22225717 tgaaaatgggttgatgaacaattgttgttaaattcgtgctctttctgtgatgctat 22225772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 23978046 - 23977999
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgt 224  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||    
T  23978046 tgaaaatgggttgatgaacaattgtggctaaattcgtgctcttgttgt 23977999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 16556118 - 16556173
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    ||||||||||||| ||||||||||||| |||||| |||||| || |||||||||||    
T  16556118 tgaaaatgggttggtgaacaattgttgttaaattcgtgctcctgctgtgatgctat 16556173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 16632674 - 16632729
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    ||||||||||||| ||||||||||||| |||||| |||||| || |||||||||||    
T  16632674 tgaaaatgggttggtgaacaattgttgttaaattcgtgctcctgctgtgatgctat 16632729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 16825727 - 16825778
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatg 228  Q
    |||||||||||||||||||||||  ||||||||| ||||||||| |||||||    
T  16825727 tgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatg 16825778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 19299514 - 19299459
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    |||||||||||||||| |||||||||| |||||| ||||||||| ||| |||||||    
T  19299514 tgaaaatgggttgatggacaattgttgttaaattcgtgctcttgctgtaatgctat 19299459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 137
Target Start/End: Original strand, 22361937 - 22362047
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttggttg 126  Q
    |||||||||||||||||| ||  || |||||| | |||||| ||||||||||||||||||   ||| ||||| ||||||||| | || |||||||| | |    
T  22361937 attgatgttgttgttgctaagtgatattgttgttgatgattcatggcttgggtgttcataattcatgaattgatgatgagaattgagttgttgttgttag 22362036  T
Q  127 ttttgtgaaat 137  Q
    |||||| ||||    
T  22362037 ttttgtaaaat 22362047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 132
Target Start/End: Complemental strand, 29605525 - 29605420
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttggttg 126  Q
    |||||||||||||||||| ||| || |||||| | |||||| |||| |||||||| |||| | ||| ||||| | |||||||||||| |||| ||| | |    
T  29605525 attgatgttgttgttgctaagaaatattgttgttgatgattcatggtttgggtgtgcataaatcatgaattgataatgagaaataagttgttcttgttgg 29605426  T
Q  127 ttttgt 132  Q
    ||||||    
T  29605425 ttttgt 29605420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 136
Target Start/End: Complemental strand, 34966942 - 34966833
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttggttg 126  Q
    |||||||||||||||| | ||| || |||||| | |||||| || ||||||||||||||| | ||| | ||  ||||| |||||||| |||||||| | |    
T  34966942 attgatgttgttgttgttaagagatattgttgttgatgattcatagcttgggtgttcataaatcatgagttcgtgatgtgaaataagttgttgttgttgg 34966843  T
Q  127 ttttgtgaaa 136  Q
    ||||||||||    
T  34966842 ttttgtgaaa 34966833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 18399013 - 18398954
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcata 87  Q
    |||||||||||||||||| ||  ||||||||||| || ||| ||||||||||||| ||||    
T  18399013 attgatgttgttgttgctaagtgatgttgttgatgataattcatggcttgggtgtgcata 18398954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 122
Target Start/End: Complemental strand, 33324768 - 33324673
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttg 122  Q
    |||||||||||| ||||| ||  ||||||||| | |||||| ||||||||||| ||||||   ||| ||||| ||||||||||| || ||||||||    
T  33324768 attgatgttgttattgctaagtgatgttgttgttgatgattcatggcttgggtattcataattcatgaattggtgatgagaaatgagttgttgttg 33324673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 122
Target Start/End: Original strand, 35136184 - 35136279
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttg 122  Q
    |||||||||||| ||||| ||  ||||||||| | |||||| ||||||||||| ||||||   ||| ||||| ||||||||||| || ||||||||    
T  35136184 attgatgttgttattgctaagtgatgttgttgttgatgattcatggcttgggtattcataattcatgaattggtgatgagaaatgagttgttgttg 35136279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 132
Target Start/End: Original strand, 33538541 - 33538646
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttggttg 126  Q
    |||||||||||| ||||| ||  || |||||| | |||||| |||||||| ||||||||| | ||| | ||| ||||||||||| || |||||||| | |    
T  33538541 attgatgttgttattgctaagtgatattgttgttgatgattcatggcttgagtgttcataaatcatgatttgatgatgagaaatgagttgttgttgttgg 33538640  T
Q  127 ttttgt 132  Q
    ||||||    
T  33538641 ttttgt 33538646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 132
Target Start/End: Original strand, 18629788 - 18629888
Alignment:
Q  33 tgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataatt-gttgatgagaaataagatgttgttggttgttttg 131  Q
    ||||||||||| | ||  || |||||| | |||||| |||| ||||||||||||| | ||| ||| | |||||||||||||| |||||||| | ||||||    
T  18629788 tgttgttgttgttaagtgatattgttgttgatgattcatggtttgggtgttcataaatcatgatttgatgatgagaaataagttgttgttgttggttttg 18629887  T
Q  132 t 132  Q
    |    
T  18629888 t 18629888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 225
Target Start/End: Complemental strand, 25175840 - 25175792
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtg 225  Q
    ||||||||| |||||||||||||  ||||||||| ||||||||| ||||    
T  25175840 tgaaaatggattgatgaacaattcatgctaaattcgtgctcttgctgtg 25175792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 159; Significance: 9e-85; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 6 - 180
Target Start/End: Complemental strand, 18911091 - 18910917
Alignment:
Q  6 aatgagatggacatcatatgtcattgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatga 105  Q
    ||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18911091 aatgagatgtaaatcatatgtaattgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatga 18910992  T
Q  106 gaaataagatgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18910991 gaaataagatgttgttggtggttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 18910917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 28 - 180
Target Start/End: Original strand, 16934154 - 16934306
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatgagaaataagatgttgttggttgt 127  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||| | ||| ||||||  |||||||||||||||||||||| ||    
T  16934154 attgatgttgttgttgctgagacatgttgttgtttatgatttatggcttgggtattcataaatcatgattgtttgtgagaaataagatgttgttggtggt 16934253  T
Q  128 tttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||| ||||    
T  16934254 tttgtgaaattggtgaagttgagttaactgttcatgtgaaggaccaaaatgaa 16934306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 28 - 131
Target Start/End: Original strand, 11477371 - 11477474
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatgagaaataagatgttgttggttgt 127  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||    
T  11477371 attgatgttgttgctgctgagatatgttgttgtttatgatttatggcttgggtgttcatatatcatgattgttgatgaaaaataagatgttgttggttgt 11477470  T
Q  128 tttg 131  Q
    ||||    
T  11477471 tttg 11477474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 28 - 131
Target Start/End: Original strand, 8268925 - 8269027
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatgagaaataagatgttgttggttgt 127  Q
    ||||||||| |||||||||||| ||||||||| |||||||| |||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||    
T  8268925 attgatgttattgttgctgagacatgttgttgtttatgatt-atggcttgggtgttcatatatcatgattgttggtgagaaataagatgttgttggttgt 8269023  T
Q  128 tttg 131  Q
    ||||    
T  8269024 tttg 8269027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 28 - 131
Target Start/End: Original strand, 8276025 - 8276127
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatgagaaataagatgttgttggttgt 127  Q
    ||||||||| |||||||||||| ||||||||| |||||||| |||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||    
T  8276025 attgatgttattgttgctgagacatgttgttgtttatgatt-atggcttgggtgttcatatatcatgattgttggtgagaaataagatgttgttggttgt 8276123  T
Q  128 tttg 131  Q
    ||||    
T  8276124 tttg 8276127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 28 - 132
Target Start/End: Original strand, 9303280 - 9303385
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatgag-aaataagatgttgttggttg 126  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||| |||| |||| || |||||||||| |    
T  9303280 attgatgttgttgttgctgagatatgttgttgactatgaattatggcttgggtgttcatataccatgattgttgttgagaaaatgagttgttgttggtgg 9303379  T
Q  127 ttttgt 132  Q
    ||||||    
T  9303380 ttttgt 9303385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 28 - 131
Target Start/End: Complemental strand, 14285036 - 14284933
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatgagaaataagatgttgttggttgt 127  Q
    |||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||| ||| | ||||| || ||| | ||||||||||||||||    
T  14285036 attgatgttgttgttgctcagatatgttgttgtttatgatttatgacttgggtgttcatatatcatgaatgttggtgtgaattgagatgttgttggttgt 14284937  T
Q  128 tttg 131  Q
    ||||    
T  14284936 tttg 14284933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 95 - 180
Target Start/End: Complemental strand, 49232445 - 49232360
Alignment:
Q  95 attgttgatgagaaataagatgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    |||| |||||||||||||  |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  49232445 attgatgatgagaaataaattgttgttggtggttttgtgaaattggtgaagttgagttaagtgttcatgtgaaggaccaaaatgaa 49232360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 95 - 180
Target Start/End: Original strand, 1467986 - 1468071
Alignment:
Q  95 attgttgatgagaaataagatgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    |||| |||||||||||||  |||||||| | |||||||||||||  ||||||||||||||||||||||||||||||||||| ||||    
T  1467986 attgatgatgagaaataaattgttgttgatggttttgtgaaattagtgaagttgagttaagtgttcatgtgaaggaccaaaatgaa 1468071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 18911270 - 18911215
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  18911270 tgaaaatgggttgatgaacaattgttgctaaattcgtgctcttgttgtgatgctat 18911215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 115 - 180
Target Start/End: Original strand, 17956252 - 17956317
Alignment:
Q  115 tgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||    
T  17956252 tgttgttggtggttttgtgaaattggtgaagttgagttaagtgttcatgagaaggaccaaaatgaa 17956317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 116 - 180
Target Start/End: Complemental strand, 16821127 - 16821063
Alignment:
Q  116 gttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    ||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||    
T  16821127 gttgttggtggttttgtgaaattggtgaagttgaattaagtgttcatgtgaaggaccaaagtgaa 16821063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 12264771 - 12264826
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  12264771 tgaaaatgggttgatgaacaattgttgctaaattcgtgctcttgctgtgatgctat 12264826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 25059016 - 25058961
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  25059016 tgaaaatgggttgatgaacaattgttgctaaattcgtgctcttgctgtgatgctat 25058961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 49232713 - 49232658
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  49232713 tgaaaatgggttgatgaacaattgttgctaaattcgtgctcttgctgtgatgctat 49232658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 177 - 229
Target Start/End: Complemental strand, 22275486 - 22275434
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgc 229  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  22275486 tgaaaatgggttgatgaacaattgttgctaaattcgtgctcttgctgtgatgc 22275434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 18897023 - 18897078
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    ||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||    
T  18897023 tgaaaatgggttgatgaacaattgttgataaattcgtgctcttgctgtgatgctat 18897078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 54651734 - 54651679
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    |||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||    
T  54651734 tgaaaatgggttgatgaataattgttgctaaattcgtgctcttgctgtgatgctat 54651679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 132
Target Start/End: Original strand, 6228797 - 6228902
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttggttg 126  Q
    |||||||||||||||||| ||| || |||||| | |||||| |||||||||||||||||| | ||| | ||| ||||||||| |||| |||||||| | |    
T  6228797 attgatgttgttgttgctaagaaatattgttgttgatgattcatggcttgggtgttcataaatcatgatttgatgatgagaattaagttgttgttgttgg 6228896  T
Q  127 ttttgt 132  Q
    ||||||    
T  6228897 ttttgt 6228902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 132
Target Start/End: Complemental strand, 12953039 - 12952934
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttggttg 126  Q
    |||||||||||||||||| ||| || |||||| | |||||| |||||||||||||||||| | ||| | ||| ||||||||||| || |||||||| | |    
T  12953039 attgatgttgttgttgctaagagatattgttgttgatgattcatggcttgggtgttcataaatcatgatttgatgatgagaaatgagttgttgttgttgg 12952940  T
Q  127 ttttgt 132  Q
    ||||||    
T  12952939 ttttgt 12952934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 1467718 - 1467773
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    ||||||||||||| ||||||||||||| |||||| ||||||||| |||||||||||    
T  1467718 tgaaaatgggttggtgaacaattgttgttaaattcgtgctcttgctgtgatgctat 1467773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 15468319 - 15468374
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    |||||||||||||| ||||||||||||||||||| ||||||||| | |||||||||    
T  15468319 tgaaaatgggttgaggaacaattgttgctaaattcgtgctcttgctatgatgctat 15468374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 44229262 - 44229207
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    |||||||||||||||||||||||| || |||||  |||||||||||||||||||||    
T  44229262 tgaaaatgggttgatgaacaattgatgttaaatccgtgctcttgttgtgatgctat 44229207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 125
Target Start/End: Original strand, 4162377 - 4162475
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttggtt 125  Q
    |||||||||||||||||| |||  | |||||| | |||||| |||||||||||||||||| | ||| | ||| ||||||||| |||| |||||||||||    
T  4162377 attgatgttgttgttgctaagaactattgttgttgatgattcatggcttgggtgttcataaatcatgatttgatgatgagaattaagttgttgttggtt 4162475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 5228589 - 5228539
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatg 228  Q
    |||||||||||||||||||| ||||||||||||| ||||||||| |||||||    
T  5228589 tgaaaatgggttgatgaaca-ttgttgctaaattcgtgctcttgctgtgatg 5228539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 12488898 - 12488957
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcata 87  Q
    |||||||||||||||||| ||  ||||||||||| || ||| ||||||||||||||||||    
T  12488898 attgatgttgttgttgctaagtgatgttgttgatgataattcatggcttgggtgttcata 12488957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 12812118 - 12812063
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    |||||||||||||||| |||||||||| |||||| ||||||||| ||| |||||||    
T  12812118 tgaaaatgggttgatggacaattgttgttaaattcgtgctcttgctgtaatgctat 12812063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 12902069 - 12902120
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatg 228  Q
    |||||||||||||||||| |||| |||||||||| ||||||||| |||||||    
T  12902069 tgaaaatgggttgatgaataatttttgctaaattcgtgctcttgctgtgatg 12902120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 38811180 - 38811239
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcata 87  Q
    |||||||||||||||||| ||  ||||||||||| |||||| ||||||||||||| ||||    
T  38811180 attgatgttgttgttgctaagtgatgttgttgatgatgattcatggcttgggtgtgcata 38811239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 41270352 - 41270301
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatg 228  Q
    |||||||||||||||||||||||  ||||||||| ||||||||| |||||||    
T  41270352 tgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatg 41270301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 122
Target Start/End: Complemental strand, 41661640 - 41661545
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttg 122  Q
    |||||||||||||||| ||||| || |||||| | |||||| || ||||| ||||||||| | ||| ||||| |||||| ||||||| ||||||||    
T  41661640 attgatgttgttgttgttgagagatattgttgttgatgattcatagcttgagtgttcataaatcatgaattgatgatgataaataagttgttgttg 41661545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 180
Target Start/End: Complemental strand, 45581436 - 45581397
Alignment:
Q  141 tgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  45581436 tgaagttgagttaagtgttcatgtgaaggaccaaaatgaa 45581397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 55316496 - 55316445
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatg 228  Q
    |||||||||||||||||||||||  ||||||||| ||||||||| |||||||    
T  55316496 tgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatg 55316445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 129
Target Start/End: Original strand, 11329133 - 11329235
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcat-ataccataattgttgatgagaaataagatgttgttggttg 126  Q
    |||||||||||||||||| ||  ||||||||||| || ||| ||||||||||| | ||| || |   | ||||||||||||||| ||||||||||||| |    
T  11329133 attgatgttgttgttgctaagtgatgttgttgatgataattcatggcttgggtatgcatgattcatgatttgttgatgagaaatgagatgttgttggtag 11329232  T
Q  127 ttt 129  Q
    |||    
T  11329233 ttt 11329235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 137
Target Start/End: Complemental strand, 34559974 - 34559864
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataa-ttgttgatgagaaataagatgttgttggttg 126  Q
    |||||||||||||||||| ||  || |||||| | |||||| |||||||| ||||||||| | ||||| ||| ||||||||| | || |||||||| | |    
T  34559974 attgatgttgttgttgctaagtgatattgttgttgatgattcatggcttgagtgttcataaatcataatttgatgatgagaattgagttgttgttgttgg 34559875  T
Q  127 ttttgtgaaat 137  Q
    |||||| ||||    
T  34559874 ttttgtaaaat 34559864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 28558017 - 28557972
Alignment:
Q  135 aattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    ||||| |||||| |||||||||||||||||||||||||||| ||||    
T  28558017 aattggtgaagtcgagttaagtgttcatgtgaaggaccaaaatgaa 28557972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 173
Target Start/End: Original strand, 54038569 - 54038606
Alignment:
Q  136 attgatgaagttgagttaagtgttcatgtgaaggacca 173  Q
    |||| |||||||||||||||||||||||||||||||||    
T  54038569 attggtgaagttgagttaagtgttcatgtgaaggacca 54038606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 217
Target Start/End: Original strand, 15936614 - 15936654
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctc 217  Q
    |||||||||||||||||||||||||| ||||||| ||||||    
T  15936614 tgaaaatgggttgatgaacaattgttactaaattcgtgctc 15936654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 124
Target Start/End: Original strand, 47784920 - 47785016
Alignment:
Q  29 ttgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttggt 124  Q
    ||||||||||||||| | ||  ||||||||| | |||||| ||||||||||||||||||   ||| | |||||| |||||||| || ||||||||||    
T  47784920 ttgatgttgttgttgttaagtgatgttgttgttaatgattcatggcttgggtgttcataattcatgatttgttggtgagaaatgagttgttgttggt 47785016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 122
Target Start/End: Original strand, 3576610 - 3576705
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttg 122  Q
    |||||||||||||||||| ||  || |||| | | |||||| ||||||||||||||||||   ||| | ||||||||||||||| || ||||||||    
T  3576610 attgatgttgttgttgctaagtaatattgtggttgatgattcatggcttgggtgttcataattcatgatttgttgatgagaaatgagttgttgttg 3576705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 219
Target Start/End: Complemental strand, 15615110 - 15615068
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctctt 219  Q
    |||||||||||||||||||||||  ||||| ||||||||||||    
T  15615110 tgaaaatgggttgatgaacaattcatgctagatttgtgctctt 15615068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 125
Target Start/End: Complemental strand, 17191616 - 17191518
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataatt-gttgatgagaaataagatgttgttggtt 125  Q
    |||||||||| ||||||| ||  ||||||||| | |||||| |||||||| |||||||||   ||| ||| ||||||||||||| || ||||| |||||    
T  17191616 attgatgttgctgttgctaagtaatgttgttgttgatgattcatggcttgagtgttcataattcatgatttgttgatgagaaatgagttgttggtggtt 17191518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 132
Target Start/End: Complemental strand, 17204772 - 17204670
Alignment:
Q  31 gatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttggttgttt 129  Q
    ||||||||||||||| ||  || |||||| | |||||| |||||||||||||| |||   ||| | ||||||||||||||| || ||||||| || ||||    
T  17204772 gatgttgttgttgctaagtaatattgttgttgatgattcatggcttgggtgtttataattcatgatttgttgatgagaaatgagttgttgttagtggttt 17204673  T
Q  130 tgt 132  Q
    |||    
T  17204672 tgt 17204670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 137
Target Start/End: Complemental strand, 1990876 - 1990767
Alignment:
Q  30 tgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggt-gttcatataccataatt-gttgatgagaaataagatgttgttggttgt 127  Q
    |||||||||||||| | ||| || |||||| | |||||| ||||||||| | ||||||| | ||| ||| | ||||||||||| || |||||||||| ||    
T  1990876 tgatgttgttgttgttaagagatattgttgttgatgattcatggcttggtttgttcataaatcatgatttgatgatgagaaatgagttgttgttggtggt 1990777  T
Q  128 tttgtgaaat 137  Q
    ||||| ||||    
T  1990776 tttgtaaaat 1990767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 124
Target Start/End: Original strand, 14059385 - 14059482
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataat-tgttgatgagaaataagatgttgttggt 124  Q
    ||||||||| ||||||||  |  ||||||||||| || ||| ||||||||||| | ||||   ||| || |||||||||||||| |||||||||||||    
T  14059385 attgatgttattgttgctatgtgatgttgttgatgataattcatggcttgggtttgcataattcatgatctgttgatgagaaatgagatgttgttggt 14059482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 136
Target Start/End: Original strand, 31412505 - 31412614
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttggttg 126  Q
    |||||||||||||||| | ||| || |||||| | |||||| || ||||| ||||||||| | ||| | ||  ||||| |||||||| |||||||| | |    
T  31412505 attgatgttgttgttgttaagagatattgttgttgatgattcatagcttgagtgttcataaatcatgagtttgtgatgtgaaataagttgttgttgttgg 31412604  T
Q  127 ttttgtgaaa 136  Q
    ||||||||||    
T  31412605 ttttgtgaaa 31412614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 15938456 - 15938488
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaat 209  Q
    |||||||||||||||||||||||||| ||||||    
T  15938456 tgaaaatgggttgatgaacaattgttactaaat 15938488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 17139583 - 17139531
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggt 80  Q
    |||||||||||||||||| ||  ||||||||||| || ||| |||||||||||    
T  17139583 attgatgttgttgttgctaagtgatgttgttgatgataattcatggcttgggt 17139531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 155; Significance: 2e-82; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 6 - 180
Target Start/End: Original strand, 13721086 - 13721260
Alignment:
Q  6 aatgagatggacatcatatgtcattgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatga 105  Q
    ||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13721086 aatgagatgtaaatcatatgtaattgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatga 13721185  T
Q  106 gaaataagatgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  13721186 gaaataagatgttgttggtggttttgtgaaattggtgaagttgagttaagtgttcatgtgaaggaccaaattgaa 13721260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 6 - 180
Target Start/End: Original strand, 16873209 - 16873383
Alignment:
Q  6 aatgagatggacatcatatgtcattgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatga 105  Q
    ||||||||| | ||||||||| || |||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||| |||||||    
T  16873209 aatgagatgtaaatcatatgtaatcgatgttgttgttgctgagatatgttgttgagtatgatttgaggcttgggtgttcatataccataattattgatga 16873308  T
Q  106 gaaataagatgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    ||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  16873309 gaaataagatgttattggtggttttgtgaaattggtgaagttgagttaagtgttcatgtgaaggaccaaattgaa 16873383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 28 - 180
Target Start/End: Original strand, 3431461 - 3431613
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatgagaaataagatgttgttggttgt 127  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||| ||||||  |||||||||||||||||||||| ||    
T  3431461 attgatgttgttgttgctgagacatgttgttgtttatgatttatggcttgggtgttcatatatcatgattgtttgtgagaaataagatgttgttggtggt 3431560  T
Q  128 tttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  3431561 tttgtgaaattggtgaagttgagttaagtgttcatgtgaaggaccaaaatgaa 3431613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 28 - 131
Target Start/End: Complemental strand, 22886402 - 22886298
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatgagaaa-taagatgttgttggttg 126  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| ||| ||||||||||||||| |||||||||||||||||    
T  22886402 attgatgttgttgttgctgagatatgttgttgtttatgatttatgacttgggtgttcatatatcatgattgttgatgagaaattaagatgttgttggttg 22886303  T
Q  127 ttttg 131  Q
    |||||    
T  22886302 ttttg 22886298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 28 - 131
Target Start/End: Complemental strand, 18612481 - 18612379
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatgagaaataagatgttgttggttgt 127  Q
    |||||||||||||||||||||| ||||||||| |||||||| |||||||| ||||||||||| ||| ||||||| |||||||||||||||||||||||||    
T  18612481 attgatgttgttgttgctgagacatgttgttgtttatgatt-atggcttgagtgttcatatatcatgattgttggtgagaaataagatgttgttggttgt 18612383  T
Q  128 tttg 131  Q
    ||||    
T  18612382 tttg 18612379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 28 - 131
Target Start/End: Complemental strand, 18619386 - 18619284
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatgagaaataagatgttgttggttgt 127  Q
    |||||||||||||||||||||| ||||||||| |||||||| |||||||| ||||||||||| ||| ||||||| |||||||||||||||||||||||||    
T  18619386 attgatgttgttgttgctgagacatgttgttgtttatgatt-atggcttgagtgttcatatatcatgattgttggtgagaaataagatgttgttggttgt 18619288  T
Q  128 tttg 131  Q
    ||||    
T  18619287 tttg 18619284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 28 - 131
Target Start/End: Original strand, 21494629 - 21494732
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatgagaaataagatgttgttggttgt 127  Q
    |||||||||||||||||||||||||||||||| |||||||||||  ||||||||| |||||| ||| ||||||| |||||| | ||||||||||||||||    
T  21494629 attgatgttgttgttgctgagatatgttgttgtttatgatttataacttgggtgtgcatatatcatgattgttggtgagaattgagatgttgttggttgt 21494728  T
Q  128 tttg 131  Q
    ||||    
T  21494729 tttg 21494732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 95 - 180
Target Start/End: Original strand, 15319406 - 15319491
Alignment:
Q  95 attgttgatgagaaataagatgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    |||| |||||||||||||  |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  15319406 attgatgatgagaaataaattgttgttggtggttttgtgaaattggtgaagttgagttaagtgttcatgtgaaggaccaaaatgaa 15319491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 95 - 180
Target Start/End: Original strand, 15499775 - 15499860
Alignment:
Q  95 attgttgatgagaaataagatgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    |||| |||||||||||||  |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  15499775 attgatgatgagaaataaattgttgttggtggttttgtgaaattggtgaagttgagttaagtgttcatgtgaaggaccaaaatgaa 15499860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 100 - 180
Target Start/End: Original strand, 22006510 - 22006590
Alignment:
Q  100 tgatgagaaataagatgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    |||||||||||||  |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  22006510 tgatgagaaataaattgttgttggtggttttgtgaaattggtgaagttgagttaagtgttcatgtgaaggaccaaagtgaa 22006590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 28 - 131
Target Start/End: Complemental strand, 22147513 - 22147411
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatgagaaataagatgttgttggttgt 127  Q
    |||||||||||||||||||||| |||| ||||  ||| ||| ||||||| |||||||||||| ||| ||||||| |||||||||||||||||||||||||    
T  22147513 attgatgttgttgttgctgagacatgtcgttgtatattatt-atggcttaggtgttcatatatcatgattgttggtgagaaataagatgttgttggttgt 22147415  T
Q  128 tttg 131  Q
    ||||    
T  22147414 tttg 22147411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 95 - 180
Target Start/End: Original strand, 13662512 - 13662597
Alignment:
Q  95 attgttgatgagaaataagatgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    |||| ||||||||| |||  |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  13662512 attgatgatgagaactaaattgttgttggtggttttgtgaaattggtgaagttgagttaagtgttcatgtgaaggaccaaaatgaa 13662597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 95 - 180
Target Start/End: Original strand, 271607 - 271692
Alignment:
Q  95 attgttgatgagaaataagatgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    |||| |||||||||||||  |||||||| | |||||||||||||  ||||||||||||||||||||||||||||||||||| ||||    
T  271607 attgatgatgagaaataaattgttgttgatggttttgtgaaattagtgaagttgagttaagtgttcatgtgaaggaccaaaatgaa 271692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 95 - 180
Target Start/End: Complemental strand, 644313 - 644228
Alignment:
Q  95 attgttgatgagaaataagatgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    |||| |||||||||||||  |||||||| | |||||||||||||  ||||||||||||||||||||||||||||||||||| ||||    
T  644313 attgatgatgagaaataaattgttgttgatggttttgtgaaattagtgaagttgagttaagtgttcatgtgaaggaccaaaatgaa 644228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 95 - 180
Target Start/End: Complemental strand, 830048 - 829963
Alignment:
Q  95 attgttgatgagaaataagatgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    |||| |||||||||||||  |||||||| | |||||||||||||  ||||||||||||||||||||||||||||||||||| ||||    
T  830048 attgatgatgagaaataaattgttgttgatggttttgtgaaattagtgaagttgagttaagtgttcatgtgaaggaccaaaatgaa 829963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 13720907 - 13720962
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  13720907 tgaaaatgggttgatgaacaattgttgctaaattcgtgctcttgttgtgatgctat 13720962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 115 - 180
Target Start/End: Original strand, 24717130 - 24717195
Alignment:
Q  115 tgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    |||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||    
T  24717130 tgttgttggtggttttgtaaaattggtgaagttgagttaagtgttcatgtgaaggaccaaaatgaa 24717195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 95 - 163
Target Start/End: Original strand, 22089041 - 22089109
Alignment:
Q  95 attgttgatgagaaataagatgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatg 163  Q
    |||| |||||||||||||  |||||||||| |||||||||||||| |||||||||||||||||||||||    
T  22089041 attgatgatgagaaataaattgttgttggtggttttgtgaaattggtgaagttgagttaagtgttcatg 22089109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 22006237 - 22006292
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  22006237 tgaaaatgggttgatgaacaattgttgctaaattcgtgctcttgctgtgatgctat 22006292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 144
Target Start/End: Complemental strand, 23837273 - 23837156
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttggttg 126  Q
    |||||||||||||||||| ||  ||||||||| | |||||| ||||||||||| ||||||   ||| | ||||||||||||||| || ||||| |||| |    
T  23837273 attgatgttgttgttgctaagtgatgttgttgttgatgattcatggcttgggtattcataattcatgatttgttgatgagaaatgagttgttggtggtgg 23837174  T
Q  127 ttttgtgaaattgatgaa 144  Q
    ||||||||||||| ||||    
T  23837173 ttttgtgaaattggtgaa 23837156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 13662244 - 13662299
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    ||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||    
T  13662244 tgaaaatgggttgataaacaattgttgctaaattcgtgctcttgctgtgatgctat 13662299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 144
Target Start/End: Complemental strand, 2545016 - 2544909
Alignment:
Q  36 tgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatgagaaataagatgttgttggttgttttgtgaa 135  Q
    |||||||| ||| | ||||||||| |||||||| |||||||||||||| ||||| ||| ||||||| ||||||||    ||||||| || ||||||||||    
T  2545016 tgttgttgttgatacatgttgttgtttatgatt-atggcttgggtgttgatatatcatgattgttgttgagaaatggactgttgttagtggttttgtgaa 2544918  T
Q  136 attgatgaa 144  Q
    |||| ||||    
T  2544917 attggtgaa 2544909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 271339 - 271394
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    ||||||||||||| ||||||||||||| |||||| ||||||||| |||||||||||    
T  271339 tgaaaatgggttggtgaacaattgttgttaaattcgtgctcttgctgtgatgctat 271394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 644581 - 644526
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    ||||||||||||| ||||||||||||| |||||| ||||||||| |||||||||||    
T  644581 tgaaaatgggttggtgaacaattgttgttaaattcgtgctcttgctgtgatgctat 644526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 830316 - 830261
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    ||||||||||||| ||||||||||||| |||||| ||||||||| |||||||||||    
T  830316 tgaaaatgggttggtgaacaattgttgttaaattcgtgctcttgctgtgatgctat 830261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 16195508 - 16195453
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    |||||||||||||||||||||||||||||||||| || ||| || |||||||||||    
T  16195508 tgaaaatgggttgatgaacaattgttgctaaattcgttctcgtgctgtgatgctat 16195453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 16873030 - 16873077
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgt 224  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||    
T  16873030 tgaaaatgggttgatgaacaattgtggctaaattcgtgctcttgttgt 16873077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 122
Target Start/End: Original strand, 38635820 - 38635915
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataa-ttgttgatgagaaataagatgttgttg 122  Q
    |||||||||||||||| | ||| || |||||| | |||||| |||||||||||||||||  | ||||| |||||||||||||| ||| ||||||||    
T  38635820 attgatgttgttgttgttaagagatattgttgttgatgattcatggcttgggtgttcatgaatcataatttgttgatgagaaacaagttgttgttg 38635915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 137
Target Start/End: Complemental strand, 26011569 - 26011459
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttggttg 126  Q
    |||||||||||||||||| ||  || |||||| | |||||| |||||||||||||||||| | ||| | ||| ||||||||| |||| |||||||| | |    
T  26011569 attgatgttgttgttgctaagtgatattgttgttgatgattcatggcttgggtgttcataaatcatgatttgatgatgagaattaagttgttgttgttgg 26011470  T
Q  127 ttttgtgaaat 137  Q
    |||||| ||||    
T  26011469 ttttgtaaaat 26011459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 132
Target Start/End: Original strand, 27233239 - 27233344
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttggttg 126  Q
    |||||||||||||||| | ||| || |||||| | |||||| |||||||||||||||||| | ||| | ||| | |||||||||||| |||||||| | |    
T  27233239 attgatgttgttgttgttaagagatattgttgttgatgattcatggcttgggtgttcataaatcatgatttgataatgagaaataagttgttgttgttgg 27233338  T
Q  127 ttttgt 132  Q
    ||||||    
T  27233339 ttttgt 27233344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 139
Target Start/End: Original strand, 21198324 - 21198436
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttggttg 126  Q
    |||||||||||||||||| ||  |||||| || | |||||| ||||||||||||||||||   ||| | |||| |||||||||| || |||||||||| |    
T  21198324 attgatgttgttgttgctaagtgatgttgctgttaatgattcatggcttgggtgttcataattcatgatttgtggatgagaaatgagttgttgttggtgg 21198423  T
Q  127 ttttgtgaaattg 139  Q
    ||| || ||||||    
T  21198424 tttggtaaaattg 21198436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 123
Target Start/End: Complemental strand, 38533724 - 38533628
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttgg 123  Q
    ||||||||||||||||||  |  ||||||||||| || ||| ||||||||||||| ||||   ||| | ||||||||||||||| ||||||||||||    
T  38533724 attgatgttgttgttgctaggtgatgttgttgatgataattcatggcttgggtgtgcataattcatgatttgttgatgagaaatgagatgttgttgg 38533628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 15319138 - 15319193
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    ||||||||||||| ||||||||||||| |||||| ||||||||| |||||| ||||    
T  15319138 tgaaaatgggttggtgaacaattgttgttaaattcgtgctcttgctgtgatactat 15319193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 15499507 - 15499562
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    ||||||||||||| ||||||||||||| |||||| ||||||||| |||||| ||||    
T  15499507 tgaaaatgggttggtgaacaattgttgttaaattcgtgctcttgctgtgatactat 15499562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 22088773 - 22088828
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    |||||||| |||| ||||||||||||| |||||| ||||||||| |||||||||||    
T  22088773 tgaaaatgtgttggtgaacaattgttgttaaattcgtgctcttgctgtgatgctat 22088828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 137
Target Start/End: Complemental strand, 5854689 - 5854579
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttggttg 126  Q
    |||||||||||||||||| ||  || |||||| | |||||| |||||||||||||||||| | ||| | ||| ||||||||| | || |||||||| | |    
T  5854689 attgatgttgttgttgctaagtgatattgttgttgatgattcatggcttgggtgttcataaatcatgatttgatgatgagaattgagttgttgttgttgg 5854590  T
Q  127 ttttgtgaaat 137  Q
    |||||| ||||    
T  5854589 ttttgtaaaat 5854579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 132
Target Start/End: Original strand, 37653788 - 37653891
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttggttg 126  Q
    |||||||||||||||| | ||  || |||||| | ||||||||||||||||||||||||||  ||| | ||| |||||| ||||||| |||||||| | |    
T  37653788 attgatgttgttgttgttaaggaatattgttgttgatgatttatggcttgggtgttcatat--catgatttgatgatgaaaaataagttgttgttgttgg 37653885  T
Q  127 ttttgt 132  Q
    ||||||    
T  37653886 ttttgt 37653891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 39115087 - 39115041
Alignment:
Q  135 aattgatgaagttgagttaagt-gttcatgtgaaggaccaaattgaa 180  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||    
T  39115087 aattgatgaagttgagttaagtggttcatgtgaaggaccaaaatgaa 39115041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 136
Target Start/End: Original strand, 18041704 - 18041813
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttggttg 126  Q
    |||||||||||||||| | |||||| |||||| | |||||| || |||| |||||||||| | ||| | ||  ||||| |||||||| |||||||| | |    
T  18041704 attgatgttgttgttgttaagatatattgttgttgatgattcatagcttaggtgttcataaatcatgagtttatgatgtgaaataagttgttgttgttgg 18041803  T
Q  127 ttttgtgaaa 136  Q
    ||||||||||    
T  18041804 ttttgtgaaa 18041813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 132
Target Start/End: Original strand, 18261643 - 18261748
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttggttg 126  Q
    |||||||||||||||| | ||| || |||||| | |||||| || ||||||||||||||| | ||| | ||| ||||||||| |||| |||||||| | |    
T  18261643 attgatgttgttgttgttaagagatattgttgttgatgattcatagcttgggtgttcataaatcatgagttgatgatgagaattaagttgttgttgttgg 18261742  T
Q  127 ttttgt 132  Q
    ||||||    
T  18261743 ttttgt 18261748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 132
Target Start/End: Original strand, 33611225 - 33611330
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttggttg 126  Q
    |||||||||||||||||| ||  || |||||| | |||||| |||||||| ||||||||| | ||| | ||| |||||||| ||||| |||||||| | |    
T  33611225 attgatgttgttgttgctaagtgatattgttgttgatgattcatggcttgtgtgttcataaatcatgatttgatgatgagatataagttgttgttgttgg 33611324  T
Q  127 ttttgt 132  Q
    ||||||    
T  33611325 ttttgt 33611330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 30120999 - 30120948
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatg 228  Q
    |||||||| ||||||||||||||  ||||||||| ||||||||| |||||||    
T  30120999 tgaaaatgagttgatgaacaattcatgctaaattcgtgctcttgctgtgatg 30120948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 4233872 - 4233826
Alignment:
Q  135 aattgatgaagttgagttaagtg-ttcatgtgaaggaccaaattgaa 180  Q
    ||||| ||||||||||||||||| |||||||||||||||||| ||||    
T  4233872 aattggtgaagttgagttaagtggttcatgtgaaggaccaaaatgaa 4233826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 17502158 - 17502112
Alignment:
Q  135 aattgatgaagttgagttaagt-gttcatgtgaaggaccaaattgaa 180  Q
    |||||||||||||||||||||| |||||| |||||||||||| ||||    
T  17502158 aattgatgaagttgagttaagtggttcatctgaaggaccaaaatgaa 17502112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 33528500 - 33528442
Alignment:
Q  28 attgatgttgttgttgct--gagatatgttgttgattatgatttatggcttgggtgttcata 87  Q
    ||||||||||||||||||  ||||||| ||||||||   |||| ||||||||||||||||||    
T  33528500 attgatgttgttgttgctaagagatattttgttgat---gattcatggcttgggtgttcata 33528442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 39446938 - 39446990
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggt 80  Q
    |||||||||||||||||| ||  ||||||||||| || ||| |||||||||||    
T  39446938 attgatgttgttgttgctaagtgatgttgttgataataattcatggcttgggt 39446990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 155; Significance: 2e-82; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 6 - 180
Target Start/End: Original strand, 7132223 - 7132397
Alignment:
Q  6 aatgagatggacatcatatgtcattgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatga 105  Q
    ||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7132223 aatgagatgtaaatcatatgtaattgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatga 7132322  T
Q  106 gaaataagatgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7132323 gaaataagatgttgttggtggttgtgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 7132397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 6 - 180
Target Start/End: Complemental strand, 20000821 - 20000647
Alignment:
Q  6 aatgagatggacatcatatgtcattgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatga 105  Q
    ||||||||| | ||||||||| || |||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||    
T  20000821 aatgagatgtaaatcatatgtaatcgatgttgttgttgctgagatatgttgttgagtatgatttgaggcttgggtgttcatataccataattgttgatga 20000722  T
Q  106 gaaataagatgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    ||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  20000721 gaaataagatgttattggtggttttgtgaaattggtgaagttgagttaagtgttcatgtgaaggaccaaattgaa 20000647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 28 - 131
Target Start/End: Complemental strand, 8045017 - 8044913
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttggttg 126  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  8045017 attgatgttgttgctgctgagatatgttgttgattatgatttatggcttgggtgttcatatatcatgaattgttgatgagaaataagatgttgttggttg 8044918  T
Q  127 ttttg 131  Q
    |||||    
T  8044917 ttttg 8044913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 28 - 131
Target Start/End: Complemental strand, 14996202 - 14996100
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatgagaaataagatgttgttggttgt 127  Q
    |||||||||||||||||||||| ||||||||| |||||||| |||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||    
T  14996202 attgatgttgttgttgctgagacatgttgttgtttatgatt-atggcttgggtgttcatatatcatgattgttggtgagaaataagatgttgttggttgt 14996104  T
Q  128 tttg 131  Q
    ||||    
T  14996103 tttg 14996100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 28 - 131
Target Start/End: Original strand, 19697553 - 19697655
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatgagaaataagatgttgttggttgt 127  Q
    |||||||||||||||||||||| ||||||||| |||||||| |||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||    
T  19697553 attgatgttgttgttgctgagacatgttgttgtttatgatt-atggcttgggtgttcatatatcatgattgttggtgagaaataagatgttgttggttgt 19697651  T
Q  128 tttg 131  Q
    ||||    
T  19697652 tttg 19697655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 28 - 131
Target Start/End: Original strand, 19708138 - 19708240
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatgagaaataagatgttgttggttgt 127  Q
    |||||||||||||||||||||| ||||||||| |||||||| |||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||    
T  19708138 attgatgttgttgttgctgagacatgttgttgtttatgatt-atggcttgggtgttcatatatcatgattgttggtgagaaataagatgttgttggttgt 19708236  T
Q  128 tttg 131  Q
    ||||    
T  19708237 tttg 19708240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 28 - 137
Target Start/End: Complemental strand, 16522893 - 16522783
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatgag-aaataagatgttgttggttg 126  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||| |||| |||| || |||||||||| |    
T  16522893 attgatgttgttgttgctgagatatgttgttgattatgaattatggcttgggtgttcatatatcatgattgttgttgagaaaatgagttgttgttggtgg 16522794  T
Q  127 ttttgtgaaat 137  Q
    |||||| ||||    
T  16522793 ttttgtaaaat 16522783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 28 - 137
Target Start/End: Complemental strand, 9295769 - 9295659
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatgag-aaataagatgttgttggttg 126  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| ||| ||||||| |||| |||| || |||||||||| |    
T  9295769 attgatgttgttgttgctgagatatgttgttgataatgaattatggcttgggtgttcatatatcatgattgttgttgagaaaatgagttgttgttggtgg 9295670  T
Q  127 ttttgtgaaat 137  Q
    || ||| ||||    
T  9295669 ttatgtaaaat 9295659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 94 - 180
Target Start/End: Complemental strand, 18168980 - 18168894
Alignment:
Q  94 aattgttgatgagaaataagatgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    ||||| |||||||||||||  |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  18168980 aattgatgatgagaaataaattgttgttggtggttttgtgaaattggtgaagttgagttaagtgttcatgtgaaggaccaaagtgaa 18168894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 115 - 180
Target Start/End: Original strand, 5682795 - 5682860
Alignment:
Q  115 tgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  5682795 tgttgttggtggttttgtgaaattggtgaagttgagttaagtgttcatgtgaaggaccaaaatgaa 5682860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 115 - 180
Target Start/End: Original strand, 25119476 - 25119541
Alignment:
Q  115 tgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  25119476 tgttgttggtggttttgtgaaattggtgaagttgagttaagtgttcatgtgaaggaccaaaatgaa 25119541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 7132044 - 7132099
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  7132044 tgaaaatgggttgatgaacaattgttgctaaattcgtgctcttgttgtgatgctat 7132099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 51 - 131
Target Start/End: Original strand, 32460880 - 32460960
Alignment:
Q  51 atgttgttgattatgatttatggcttgggtgttcatataccataattgttgatgagaaataagatgttgttggttgttttg 131  Q
    ||||||||| |||||||||||| ||||||||| |||||| ||| ||||||| |||||| | ||||||||||||||||||||    
T  32460880 atgttgttgtttatgatttatgacttgggtgtgcatatatcatgattgttggtgagaattgagatgttgttggttgttttg 32460960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 8378428 - 8378373
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  8378428 tgaaaatgggttgatgaacaattgttgctaaattcgtgctcttgctgtgatgctat 8378373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 18169247 - 18169192
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  18169247 tgaaaatgggttgatgaacaattgttgctaaattcgtgctcttgctgtgatgctat 18169192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 122
Target Start/End: Complemental strand, 15044903 - 15044808
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttg 122  Q
    |||||||||||||||||| ||  ||||||||||| |||||| |||||||||||||||||| | ||| | ||| |||||||||||||  ||||||||    
T  15044903 attgatgttgttgttgctaagtgatgttgttgatgatgattcatggcttgggtgttcataaatcatgatttgatgatgagaaataaattgttgttg 15044808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 122
Target Start/End: Original strand, 15109521 - 15109616
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttg 122  Q
    |||||||||||||||||| ||  ||||||||||| |||||| |||||||||||||||||| | ||| | ||| |||||||||||||  ||||||||    
T  15109521 attgatgttgttgttgctaagtaatgttgttgatgatgattcatggcttgggtgttcataaatcatgatttgatgatgagaaataaattgttgttg 15109616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 19020763 - 19020708
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    ||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||    
T  19020763 tgaaaatgggttgatgaacaattcttgctaaattcgtgctcttgctgtgatgctat 19020708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 18248495 - 18248440
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    |||||||||||||||||||||||| || |||||| ||||||||| |||||||||||    
T  18248495 tgaaaatgggttgatgaacaattgatgttaaattcgtgctcttgctgtgatgctat 18248440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 20001000 - 20000953
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgt 224  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||    
T  20001000 tgaaaatgggttgatgaacaattgtggctaaattcgtgctcttgttgt 20000953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 110
Target Start/End: Complemental strand, 9795283 - 9795207
Alignment:
Q  33 tgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatgagaaat 110  Q
    ||||||||||| ||| | ||||||||| |||||||| |||||||||||||| ||||| ||| ||||||| ||||||||    
T  9795283 tgttgttgttgttgatacatgttgttgtttatgatt-atggcttgggtgttgatatatcatgattgttgttgagaaat 9795207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 132
Target Start/End: Original strand, 40905105 - 40905210
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttggttg 126  Q
    |||||||||||||||||| ||| || |||||| | |||| |  ||||||||||||||||| | ||| | ||| |||||||||||||| |||||||| | |    
T  40905105 attgatgttgttgttgctaagagatattgttgttgatgactcgtggcttgggtgttcataaatcatgatttgatgatgagaaataagttgttgttgttgg 40905204  T
Q  127 ttttgt 132  Q
    ||||||    
T  40905205 ttttgt 40905210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 15287224 - 15287279
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    |||||||||| |||||||||||| | |||||||| ||||||||| |||||||||||    
T  15287224 tgaaaatgggatgatgaacaattatagctaaattcgtgctcttgctgtgatgctat 15287279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 15294333 - 15294388
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    |||||||||| |||||||||||| | |||||||| ||||||||| |||||||||||    
T  15294333 tgaaaatgggatgatgaacaattatagctaaattcgtgctcttgctgtgatgctat 15294388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 47357931 - 47357880
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatg 228  Q
    |||||||||||||||||||||||  ||||||||| ||||||||| |||||||    
T  47357931 tgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatg 47357880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 131
Target Start/End: Complemental strand, 19020495 - 19020459
Alignment:
Q  95 attgttgatgagaaataagatgttgttggttgttttg 131  Q
    |||| ||||||||||||||||||||||||||||||||    
T  19020495 attgatgatgagaaataagatgttgttggttgttttg 19020459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 130
Target Start/End: Original strand, 15013454 - 15013557
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttggttg 126  Q
    |||||| ||||||||| | ||| || |||||| | |||||| |||||||||||||||||| | ||| | ||| ||||||||||| |  |||||||| |||    
T  15013454 attgatattgttgttgttaagagatattgttgttgatgattcatggcttgggtgttcataaatcatgatttgatgatgagaaatgacttgttgttgtttg 15013553  T
Q  127 tttt 130  Q
    ||||    
T  15013554 tttt 15013557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 17145636 - 17145691
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    |||||||| ||||||||||||||| || |||||| ||||||||  |||||||||||    
T  17145636 tgaaaatgagttgatgaacaattgatgttaaattcgtgctcttactgtgatgctat 17145691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 122
Target Start/End: Complemental strand, 38764784 - 38764689
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttg 122  Q
    |||||||||||||||| | ||  || |||||| | |||||| |||||||||||||||||| | ||| | |||  ||||||||||||| ||||||||    
T  38764784 attgatgttgttgttgttaaggaatattgttgttgatgattcatggcttgggtgttcataaatcatgatttgaagatgagaaataagttgttgttg 38764689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 122
Target Start/End: Original strand, 41256541 - 41256636
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttg 122  Q
    |||||||||||||||| | ||| || |||||| | |||||| |||| ||||||||||||| | ||| | ||| ||||||||||| || ||||||||    
T  41256541 attgatgttgttgttgttaagagatattgttgttgatgattcatggtttgggtgttcataaatcatgatttgatgatgagaaatgagttgttgttg 41256636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 137
Target Start/End: Original strand, 7964883 - 7964993
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttggttg 126  Q
    |||||| ||||||||||| ||  || |||||| | |||||| |||||||| ||||||||| | ||| | ||| ||||||||||| || |||||||| | |    
T  7964883 attgattttgttgttgctaagtgatattgttgttgatgattcatggcttgagtgttcataaatcatgatttgatgatgagaaatgagttgttgttgttgg 7964982  T
Q  127 ttttgtgaaat 137  Q
    |||||| ||||    
T  7964983 ttttgtaaaat 7964993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 180
Target Start/End: Original strand, 15213877 - 15213923
Alignment:
Q  135 aattgatgaagttgagttaagtg-ttcatgtgaaggaccaaattgaa 180  Q
    ||||| ||||||||||||||||| |||||||||||||||||| ||||    
T  15213877 aattggtgaagttgagttaagtggttcatgtgaaggaccaaaatgaa 15213923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 136
Target Start/End: Original strand, 18238329 - 18238438
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttggttg 126  Q
    |||||||||||||||| | ||| || |||||| | |||||| || ||||||||||||||| | ||| | ||  ||||| |||||||| |||||||| | |    
T  18238329 attgatgttgttgttgttaagagatattgttgttgatgattcatagcttgggtgttcataaatcatgagttagtgatgtgaaataagttgttgttgttgg 18238428  T
Q  127 ttttgtgaaa 136  Q
    ||| ||||||    
T  18238429 tttcgtgaaa 18238438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 124
Target Start/End: Original strand, 19821948 - 19822045
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttggt 124  Q
    ||||||||||||||||||  |  ||||||||| | |||||| ||||||||||| ||||||   ||| | ||||||||||||||| || |||| |||||    
T  19821948 attgatgttgttgttgctatgtgatgttgttgttgatgattcatggcttgggtattcataattcatgatttgttgatgagaaatgagttgtttttggt 19822045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 136
Target Start/End: Complemental strand, 54398458 - 54398349
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttggttg 126  Q
    |||||||||||||||| | ||| || |||||| | |||||| |||||||||||||| ||| | ||| ||||  ||||  |||||||| |||| ||| | |    
T  54398458 attgatgttgttgttgttaagagatattgttgttgatgattcatggcttgggtgtttataaatcatgaatttgtgatctgaaataagttgttattgttgg 54398359  T
Q  127 ttttgtgaaa 136  Q
    ||||||||||    
T  54398358 ttttgtgaaa 54398349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 139
Target Start/End: Complemental strand, 14901307 - 14901195
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttggttg 126  Q
    |||||||||||||||||| ||  ||| ||||| | |||||| ||| | ||||||| ||||   ||| ||||| |||||||||||  | |||||||||| |    
T  14901307 attgatgttgttgttgctaagtgatgctgttgttgatgattcatgacatgggtgtgcataattcatgaattgatgatgagaaatgggttgttgttggtgg 14901208  T
Q  127 ttttgtgaaattg 139  Q
    |||||| ||||||    
T  14901207 ttttgtaaaattg 14901195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 155; Significance: 2e-82; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 6 - 180
Target Start/End: Original strand, 12636026 - 12636200
Alignment:
Q  6 aatgagatggacatcatatgtcattgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatga 105  Q
    ||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  12636026 aatgagatgtaaatcatatgtaattgatgttgttgttgctgagatatgttgttgattatgatttatggattgggtgttcatataccataattgttgatga 12636125  T
Q  106 gaaataagatgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12636126 gaaataagatgttgttggtggttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 12636200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 6 - 180
Target Start/End: Complemental strand, 8943944 - 8943770
Alignment:
Q  6 aatgagatggacatcatatgtcattgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatga 105  Q
    ||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  8943944 aatgagatgtaaatcatatgtaattgatgttgttgttgctgagatatgttgttgattatgatttatggattgggtgttcatataccataattgttaatga 8943845  T
Q  106 gaaataagatgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8943844 gaaataagatgttgttggtggttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 8943770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 6 - 180
Target Start/End: Original strand, 12641800 - 12641974
Alignment:
Q  6 aatgagatggacatcatatgtcattgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatga 105  Q
    ||||||||| | ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  12641800 aatgagatgtaaatcatatgtaattgatgttgttgttgctgagatatgttgttgagtatgatttatggcttgggtgttcatataccataagtgttgatga 12641899  T
Q  106 gaaataagatgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12641900 gaaataagatgttgttggtggttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 12641974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 6 - 180
Target Start/End: Original strand, 42178127 - 42178301
Alignment:
Q  6 aatgagatggacatcatatgtcattgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatga 105  Q
    ||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  42178127 aatgagatgtaaatcatatgtaattgatgttgttgttgctgagatatgttgttgattatgacttatggcttgggtgttcatataccaaaattgttgatga 42178226  T
Q  106 gaaataagatgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  42178227 gaaataagatgttgttggtggttttgtgaaattggtgaagttgagttaagtgttcatgtgaaggaccaaattgaa 42178301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 6 - 180
Target Start/End: Original strand, 3798761 - 3798935
Alignment:
Q  6 aatgagatggacatcatatgtcattgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatga 105  Q
    ||||||||| | ||||||||| ||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||    
T  3798761 aatgagatgtaaatcatatgtaattgatgttgttgttgctgagatatgttgttgagtatgatttgaggcttgggtgttcatataccataattgttgatga 3798860  T
Q  106 gaaataagatgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    ||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  3798861 gaaataagatgttattggtggttttgtgaaattggtgaagttgagttaagtgttcatgtgaaggaccaaattgaa 3798935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 28 - 131
Target Start/End: Original strand, 28031419 - 28031523
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatgag-aaataagatgttgttggttg 126  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||| |||| |||||||||||||||    
T  28031419 attgatgttgttgttgttgagatatgttgttgtttatgatttatggcttgggtgttcatatatcatgattgttgatgagaaaatgagatgttgttggttg 28031518  T
Q  127 ttttg 131  Q
    |||||    
T  28031519 ttttg 28031523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 28 - 131
Target Start/End: Complemental strand, 15633288 - 15633186
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatgagaaataagatgttgttggttgt 127  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||| ||||||  |||||||||||||||||||||||||    
T  15633288 attgatgttgttgttgctgagatatgttgttgct-atgatttatggcttgggtgttcatatatcatgattgttagtgagaaataagatgttgttggttgt 15633190  T
Q  128 tttg 131  Q
    ||||    
T  15633189 tttg 15633186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 28 - 109
Target Start/End: Complemental strand, 25213123 - 25213042
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatgagaaa 109  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| ||| ||||||| |||||||    
T  25213123 attgatgttgttgttgctgagatatgttgttgataatgaattatggcttgggtgttcatatatcatgattgttgttgagaaa 25213042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 95 - 175
Target Start/End: Original strand, 24686028 - 24686108
Alignment:
Q  95 attgttgatgagaaataagatgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaa 175  Q
    |||| |||||||||||||  |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  24686028 attgatgatgagaaataaattgttgttggtggttttgtgaaattggtgaagttgagttaagtgttcatgtgaaggaccaaa 24686108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 28 - 130
Target Start/End: Complemental strand, 17204406 - 17204303
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatgag-aaataagatgttgttggttg 126  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||   |||||||||| ||| ||||||| |||| |||| |||||||||||||||    
T  17204406 attgatgttgttgttgctgagatatattgttgattatgaattatggcttatatgttcatatatcatgattgttgttgagaaaatgagatgttgttggttg 17204307  T
Q  127 tttt 130  Q
    ||||    
T  17204306 tttt 17204303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 28 - 137
Target Start/End: Original strand, 24826899 - 24827009
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatgag-aaataagatgttgttggttg 126  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||| || ||| ||||||| |||| |||| || |||||||||| |    
T  24826899 attgatgttgttgttgctgagatacgttgttgattatgaattatggcttgggtgctcatttatcatgattgttgttgagaaaatgagctgttgttggtgg 24826998  T
Q  127 ttttgtgaaat 137  Q
    |||||| ||||    
T  24826999 ttttgtaaaat 24827009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 95 - 180
Target Start/End: Complemental strand, 12728401 - 12728316
Alignment:
Q  95 attgttgatgagaaataagatgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    |||| |||||||||||||  |||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||    
T  12728401 attgatgatgagaaataaattgttgttggtggttttgtgaaattggtgaagttgagttaagtgttcaggtgaaggaccaaagtgaa 12728316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 95 - 180
Target Start/End: Complemental strand, 34824484 - 34824399
Alignment:
Q  95 attgttgatgagaaataagatgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    |||| |||||||||||||  |||||||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||    
T  34824484 attgatgatgagaaataaattgttgttggtggttttgtgaaattggtgaagttaagttaagtgttcatgtgaaggaccaaagtgaa 34824399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 94 - 180
Target Start/End: Complemental strand, 22274731 - 22274645
Alignment:
Q  94 aattgttgatgagaaataagatgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    |||||||| ||||||||    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  22274731 aattgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaagttgagttaagtgttcatgtgaaggaccaaaatgaa 22274645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 95 - 180
Target Start/End: Original strand, 11231585 - 11231670
Alignment:
Q  95 attgttgatgagaaataagatgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    |||| |||||||||||||  |||||||| | |||||||||||||  ||||||||||||||||||||||||||||||||||| ||||    
T  11231585 attgatgatgagaaataaattgttgttgatggttttgtgaaattagtgaagttgagttaagtgttcatgtgaaggaccaaaatgaa 11231670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 94 - 175
Target Start/End: Complemental strand, 22283964 - 22283883
Alignment:
Q  94 aattgttgatgagaaataagatgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaa 175  Q
    ||||| || |||||||| |  |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  22283964 aattgctgttgagaaatgaattgttgttggtggttttgtgaaattggtgaagttgagttaagtgttcatgtgaaggaccaaa 22283883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 95 - 180
Target Start/End: Original strand, 22513432 - 22513517
Alignment:
Q  95 attgttgatgagaaataagatgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    |||| |||||||||||||  |||||||| | |||||||||||||  ||||||||||||||||||||||||||||||||||| ||||    
T  22513432 attgatgatgagaaataaattgttgttgatggttttgtgaaattagtgaagttgagttaagtgttcatgtgaaggaccaaaatgaa 22513517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 95 - 180
Target Start/End: Original strand, 28776054 - 28776139
Alignment:
Q  95 attgttgatgagaaataagatgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    |||| |||||||||||||  |||||||| | |||||||||||||  ||||||||||||||||||||||||||||||||||| ||||    
T  28776054 attgatgatgagaaataaattgttgttgatggttttgtgaaattagtgaagttgagttaagtgttcatgtgaaggaccaaaatgaa 28776139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 8944123 - 8944068
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  8944123 tgaaaatgggttgatgaacaattgttgctaaattcgtgctcttgttgtgatgctat 8944068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 124
Target Start/End: Original strand, 3413 - 3509
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatgagaaataagatgttgttggt 124  Q
    |||||||||||||||||| ||  ||||||||||| |||||| ||||||||||||||||||   ||| ||||| |||||||||| || ||||||||||    
T  3413 attgatgttgttgttgctaagtgatgttgttgatgatgattcatggcttgggtgttcataattcatgattgtagatgagaaatgagttgttgttggt 3509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 12635847 - 12635902
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||    
T  12635847 tgaaaataggttgatgaacaattgttgctaaattcgtgctcttgttgtgatgctat 12635902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 12728669 - 12728614
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  12728669 tgaaaatgggttgatgaacaattgttgctaaattcgtgctcttgctgtgatgctat 12728614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 34824752 - 34824697
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  34824752 tgaaaatgggttgatgaacaattgttgctaaattcgtgctcttgctgtgatgctat 34824697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 42177948 - 42178003
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  42177948 tgaaaatgggttgatgaacaattgttgctaaattcgtgctcttgttgtaatgctat 42178003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 28 - 137
Target Start/End: Original strand, 19433504 - 19433614
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttggttg 126  Q
    |||||||||||||||||| ||| || |||||| | |||||| ||||||||||||||||||   ||| | ||||||||||||||| || |||||||||| |    
T  19433504 attgatgttgttgttgctaagagatattgttgttgatgattcatggcttgggtgttcataattcatgatttgttgatgagaaatgagttgttgttggtgg 19433603  T
Q  127 ttttgtgaaat 137  Q
    |||||| ||||    
T  19433604 ttttgtaaaat 19433614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 21142172 - 21142117
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    |||||||||||||||||||||||| || |||||| |||||||||||||||||||||    
T  21142172 tgaaaatgggttgatgaacaattgatgttaaattcgtgctcttgttgtgatgctat 21142117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 65 - 130
Target Start/End: Complemental strand, 22256332 - 22256270
Alignment:
Q  65 gatttatggcttgggtgttcatataccataattgttgatgagaaataagatgttgttggttgtttt 130  Q
    ||||||||||||||||||| ||||| ||||||||   |||||||||||||||||||||||||||||    
T  22256332 gatttatggcttgggtgtttatatatcataattg---atgagaaataagatgttgttggttgtttt 22256270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 23778024 - 23778079
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    ||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||    
T  23778024 tgaaaatgggttgatgaacaattcttgctaaattcgtgctcttgctgtgatgctat 23778079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 3798582 - 3798629
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgt 224  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||    
T  3798582 tgaaaatgggttgatgaacaattgtggctaaattcgtgctcttgttgt 3798629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 11231317 - 11231372
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    ||||||||||||| ||||||||||||| |||||| ||||||||| |||||||||||    
T  11231317 tgaaaatgggttggtgaacaattgttgttaaattcgtgctcttgctgtgatgctat 11231372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 12641621 - 12641668
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgt 224  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||    
T  12641621 tgaaaatgggttgatgaacaattgtggctaaattcgtgctcttgttgt 12641668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 16935870 - 16935815
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    ||||||||||||||||||||||||||| ||||||  |||||||| |||||||||||    
T  16935870 tgaaaatgggttgatgaacaattgttgttaaattcatgctcttgctgtgatgctat 16935815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 17006530 - 17006475
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    ||||||||||||||||||||||||||| ||||||  |||||||| |||||||||||    
T  17006530 tgaaaatgggttgatgaacaattgttgttaaattcatgctcttgctgtgatgctat 17006475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 22513164 - 22513219
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    ||||||||||||| ||||||||||||| |||||| ||||||||| |||||||||||    
T  22513164 tgaaaatgggttggtgaacaattgttgttaaattcgtgctcttgctgtgatgctat 22513219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 24685760 - 24685815
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    ||||||||||||| ||||||||||||| |||||| ||||||||| |||||||||||    
T  24685760 tgaaaatgggttggtgaacaattgttgttaaattcgtgctcttgctgtgatgctat 24685815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 28775786 - 28775841
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    ||||||||||||| ||||||||||||| |||||| ||||||||| |||||||||||    
T  28775786 tgaaaatgggttggtgaacaattgttgttaaattcgtgctcttgctgtgatgctat 28775841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 139
Target Start/End: Complemental strand, 25305520 - 25305408
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataatt-gttgatgagaaataagatgttgttggttg 126  Q
    |||||||||||||| ||| ||  ||||||||| | |||||| ||||| ||||| ||||||   ||| ||| ||||||||||||| || |||||||||| |    
T  25305520 attgatgttgttgtggctaagtgatgttgttgttgatgattcatggcctgggtattcataattcatgatttgttgatgagaaatgagttgttgttggtag 25305421  T
Q  127 ttttgtgaaattg 139  Q
    ||||| |||||||    
T  25305420 ttttgcgaaattg 25305408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 19886636 - 19886687
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatg 228  Q
    |||||||||||||||||||||||  ||||||||| ||||||||| |||||||    
T  19886636 tgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatg 19886687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 136
Target Start/End: Complemental strand, 68067 - 67958
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataatt-gttgatgagaaataagatgttgttggttg 126  Q
    |||||||||||||||||| ||  || |||||| |  ||||| |||||||| |||||||||   ||| ||| | |||||||||||||| |||||||| | |    
T  68067 attgatgttgttgttgctaagtgatattgttgttggtgattcatggcttgcgtgttcataattcatgatttgatgatgagaaataagttgttgttgttgg 67968  T
Q  127 ttttgtgaaa 136  Q
    ||||||||||    
T  67967 ttttgtgaaa 67958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 136
Target Start/End: Original strand, 23821777 - 23821886
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttggttg 126  Q
    |||||||||||||||||| ||  || |||||| | |||||| ||||| ||||||||||||   ||| | ||| ||||| |||||||| |||||||| | |    
T  23821777 attgatgttgttgttgctaagtgatattgttgttgatgattcatggcatgggtgttcataattcatgatttgatgatgtgaaataagttgttgttgttgg 23821876  T
Q  127 ttttgtgaaa 136  Q
    ||||||||||    
T  23821877 ttttgtgaaa 23821886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 136
Target Start/End: Original strand, 23830856 - 23830965
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttggttg 126  Q
    |||||||||||||||||| ||  || |||||| | |||||| ||||| ||||||||||||   ||| | ||| ||||| |||||||| |||||||| | |    
T  23830856 attgatgttgttgttgctaagtgatattgttgttgatgattcatggcatgggtgttcataattcatgatttgatgatgtgaaataagttgttgttgttgg 23830955  T
Q  127 ttttgtgaaa 136  Q
    ||||||||||    
T  23830956 ttttgtgaaa 23830965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 124
Target Start/End: Complemental strand, 28974124 - 28974027
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcat-ataccataattgttgatgagaaataagatgttgttggt 124  Q
    |||||||||||||||||| ||  ||||||||||| || ||| ||||||||||| | ||| || |   | ||||||||||||||| |||||||||||||    
T  28974124 attgatgttgttgttgctaagtcatgttgttgatgataattcatggcttgggtttgcatgattcatgatttgttgatgagaaatgagatgttgttggt 28974027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 232
Target Start/End: Original strand, 7507844 - 7507886
Alignment:
Q  190 atgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    ||||| |||| |||||||||| |||||||||||||||||||||    
T  7507844 atgaataattattgctaaattcgtgctcttgttgtgatgctat 7507886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 180
Target Start/End: Original strand, 22775457 - 22775503
Alignment:
Q  135 aattgatgaagttgagttaagtg-ttcatgtgaaggaccaaattgaa 180  Q
    ||||| ||||||||||||||||| |||||||||||||||||| ||||    
T  22775457 aattggtgaagttgagttaagtggttcatgtgaaggaccaaaatgaa 22775503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 180
Target Start/End: Original strand, 22780835 - 22780881
Alignment:
Q  135 aattgatgaagttgagttaagtg-ttcatgtgaaggaccaaattgaa 180  Q
    ||||| ||||||||||||||||| |||||||||||||||||| ||||    
T  22780835 aattggtgaagttgagttaagtggttcatgtgaaggaccaaaatgaa 22780881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 137
Target Start/End: Complemental strand, 24884761 - 24884651
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttggttg 126  Q
    |||||||||||||||||| | | || |||||| | |||||| ||| |||||||||||||| | ||| | ||| ||| ||||||| || |||||||| | |    
T  24884761 attgatgttgttgttgctaatagatattgttgttgatgattcatgacttgggtgttcataaatcatgatttgatgaggagaaatgagttgttgttgttgg 24884662  T
Q  127 ttttgtgaaat 137  Q
    |||||| ||||    
T  24884661 ttttgtaaaat 24884651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 151; Significance: 5e-80; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 6 - 180
Target Start/End: Complemental strand, 15927666 - 15927492
Alignment:
Q  6 aatgagatggacatcatatgtcattgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatga 105  Q
    ||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  15927666 aatgagatgtaaatcatatgtaattgatgttgttgttgctgagatatgttgttgattatgatctatggcttgggtgttcacataccataattgttgatga 15927567  T
Q  106 gaaataagatgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15927566 gaaataagatgttgttggtggttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 15927492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 6 - 180
Target Start/End: Original strand, 14251056 - 14251230
Alignment:
Q  6 aatgagatggacatcatatgtcattgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatga 105  Q
    ||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  14251056 aatgagatgtaaatcatatgtaattgatgttgttgttgctgagatatgttgttgattatgacttatggcttgggtgttcagataccataattgttgatga 14251155  T
Q  106 gaaataagatgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  14251156 gaaataagatgttgttggtggttttgtgaaattggtgaagttgagttaagtgttcatgtgaaggaccaaattgaa 14251230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 6 - 180
Target Start/End: Original strand, 18980179 - 18980353
Alignment:
Q  6 aatgagatggacatcatatgtcattgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatga 105  Q
    ||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  18980179 aatgagatgtaaatcatatgtaattgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatatatcataattgttgatga 18980278  T
Q  106 gaaataagatgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  18980279 gaaataagatgttggtggtggttttgtgaaattgatgaagttgagttgagtattcatgtgaaggaccaaattgaa 18980353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 6 - 180
Target Start/End: Complemental strand, 13758468 - 13758294
Alignment:
Q  6 aatgagatggacatcatatgtcattgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatga 105  Q
    ||||||||| | ||||||||| ||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||    
T  13758468 aatgagatgtaaatcatatgtaattgatgttgttgttgctgagatatgttgttgagtatgatttgaggcttgggtgttcatataccataattgttgatga 13758369  T
Q  106 gaaataagatgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    ||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  13758368 gaaataagatgttattggtggttttgtgaaattggtgaagttgagttaagtgttcatgtgaaggaccaaattgaa 13758294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 28 - 180
Target Start/End: Complemental strand, 371164 - 371012
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatgagaaataagatgttgttggttgt 127  Q
    ||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||| ||| ||||||  |||||||||||||||||||||| ||    
T  371164 attgatgttgttgttgccgagacatgttgttgtttatgatttatggcttgggtgttcatatatcatgattgtttgtgagaaataagatgttgttggtggt 371065  T
Q  128 tttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  371064 tttgtgaaattggtgaagttgagttaagtgttcatgtgaaggaccaaaatgaa 371012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 95 - 176
Target Start/End: Original strand, 15951038 - 15951119
Alignment:
Q  95 attgttgatgagaaataagatgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaat 176  Q
    |||| |||||||||||||  |||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  15951038 attgatgatgagaaataaattgttgttggtggttttctgaaattggtgaagttgagttaagtgttcatgtgaaggaccaaat 15951119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 117 - 180
Target Start/End: Original strand, 1937270 - 1937333
Alignment:
Q  117 ttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  1937270 ttgttggtggttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaaatgaa 1937333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 95 - 180
Target Start/End: Complemental strand, 7822737 - 7822652
Alignment:
Q  95 attgttgatgagaaataagatgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    |||| |||||||||||||  |||||||| | |||||||||||||  ||||||||||||||||||||||||||||||||||| ||||    
T  7822737 attgatgatgagaaataaattgttgttgatggttttgtgaaattagtgaagttgagttaagtgttcatgtgaaggaccaaaatgaa 7822652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 95 - 180
Target Start/End: Complemental strand, 7830048 - 7829963
Alignment:
Q  95 attgttgatgagaaataagatgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    |||| |||||||||||||  |||||||| | |||||||||||||  ||||||||||||||||||||||||||||||||||| ||||    
T  7830048 attgatgatgagaaataaattgttgttgatggttttgtgaaattagtgaagttgagttaagtgttcatgtgaaggaccaaaatgaa 7829963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 95 - 180
Target Start/End: Original strand, 27101884 - 27101969
Alignment:
Q  95 attgttgatgagaaataagatgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    |||| |||||||||||||  |||||||| | |||||||||||||  ||||||||||||||||||||||||||||||||||| ||||    
T  27101884 attgatgatgagaaataaattgttgttgatggttttgtgaaattagtgaagttgagttaagtgttcatgtgaaggaccaaaatgaa 27101969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 95 - 180
Target Start/End: Original strand, 27109232 - 27109317
Alignment:
Q  95 attgttgatgagaaataagatgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    |||| |||||||||||||  |||||||| | |||||||||||||  ||||||||||||||||||||||||||||||||||| ||||    
T  27109232 attgatgatgagaaataaattgttgttgatggttttgtgaaattagtgaagttgagttaagtgttcatgtgaaggaccaaaatgaa 27109317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 95 - 180
Target Start/End: Complemental strand, 27176442 - 27176357
Alignment:
Q  95 attgttgatgagaaataagatgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    |||| |||||||||||||  |||||||| | |||||||||||||  ||||||||||||||||||||||||||||||||||| ||||    
T  27176442 attgatgatgagaaataaattgttgttgatggttttgtgaaattagtgaagttgagttaagtgttcatgtgaaggaccaaaatgaa 27176357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 95 - 180
Target Start/End: Original strand, 38783976 - 38784061
Alignment:
Q  95 attgttgatgagaaataagatgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    |||| |||||||||||||  |||||||| | |||||||||||||  ||||||||||||||||||||||||||||||||||| ||||    
T  38783976 attgatgatgagaaataaattgttgttgatggttttgtgaaattagtgaagttgagttaagtgttcatgtgaaggaccaaaatgaa 38784061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 136
Target Start/End: Complemental strand, 13377604 - 13377495
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttggttg 126  Q
    |||||||||||||||||| ||  ||||||||||| |||||| |||||||||||||||||| | ||| | ||| |||||||||||||| |||||||| | |    
T  13377604 attgatgttgttgttgctaagtaatgttgttgatgatgattcatggcttgggtgttcataaatcatgatttgatgatgagaaataagttgttgttgttgg 13377505  T
Q  127 ttttgtgaaa 136  Q
    ||| ||||||    
T  13377504 tttggtgaaa 13377495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 15950770 - 15950825
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  15950770 tgaaaatgggttgatgaacaattgttgctaaattcgtgctcttgctgtgatgctat 15950825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 18980000 - 18980055
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  18980000 tgaaaatgggttgatgaacaattgttgctaaattcgtgctcttgctgtgatgctat 18980055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 144
Target Start/End: Original strand, 17224110 - 17224227
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttggttg 126  Q
    |||||||||||||||||| ||  |||||||| || |||||| ||||||||||| ||||||   ||| | ||||||||||||||| || |||||||||| |    
T  17224110 attgatgttgttgttgctaagtgatgttgttaatgatgattcatggcttgggtattcataattcatgatttgttgatgagaaatgagttgttgttggtgg 17224209  T
Q  127 ttttgtgaaattgatgaa 144  Q
    |||||| |||||| ||||    
T  17224210 ttttgtaaaattggtgaa 17224227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 14250877 - 14250932
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||    
T  14250877 tgaaaatgggttgatgaacaattgttgttaaattcgtgctcttgttgtaatgctat 14250932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 15760093 - 15760148
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    ||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||    
T  15760093 tgaaaatgggttgatgaacaattattgctaaattcgtgctcttgctgtgatgctat 15760148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 15927845 - 15927790
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    ||||||||| ||||||| |||||||||||||||| |||||||||||||||||||||    
T  15927845 tgaaaatggattgatgatcaattgttgctaaattcgtgctcttgttgtgatgctat 15927790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 7823005 - 7822950
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    ||||||||||||| ||||||||||||| |||||| ||||||||| |||||||||||    
T  7823005 tgaaaatgggttggtgaacaattgttgttaaattcgtgctcttgctgtgatgctat 7822950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 7830316 - 7830261
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    ||||||||||||| ||||||||||||| |||||| ||||||||| |||||||||||    
T  7830316 tgaaaatgggttggtgaacaattgttgttaaattcgtgctcttgctgtgatgctat 7830261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 13758647 - 13758600
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgt 224  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||    
T  13758647 tgaaaatgggttgatgaacaattgtggctaaattcgtgctcttgttgt 13758600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 27101616 - 27101671
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    ||||||||||||| ||||||||||||| |||||| ||||||||| |||||||||||    
T  27101616 tgaaaatgggttggtgaacaattgttgttaaattcgtgctcttgctgtgatgctat 27101671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 27108964 - 27109019
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    ||||||||||||| ||||||||||||| |||||| ||||||||| |||||||||||    
T  27108964 tgaaaatgggttggtgaacaattgttgttaaattcgtgctcttgctgtgatgctat 27109019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 27176710 - 27176655
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    ||||||||||||| ||||||||||||| |||||| ||||||||| |||||||||||    
T  27176710 tgaaaatgggttggtgaacaattgttgttaaattcgtgctcttgctgtgatgctat 27176655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 38783708 - 38783763
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    ||||||||||||| ||||||||||||| |||||| ||||||||| |||||||||||    
T  38783708 tgaaaatgggttggtgaacaattgttgttaaattcgtgctcttgctgtgatgctat 38783763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 135 - 180
Target Start/End: Original strand, 32494490 - 32494535
Alignment:
Q  135 aattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||    
T  32494490 aattggtgaagttgagttaagtgttcatgtgaaggaccaaaatgaa 32494535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 2437734 - 2437683
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatg 228  Q
    |||||||||| | |||||||||| |||||||||| |||||||||||||||||    
T  2437734 tgaaaatgggataatgaacaattcttgctaaattcgtgctcttgttgtgatg 2437683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 13910999 - 13911050
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatg 228  Q
    |||||||| ||||||||||||||  ||||||||| |||||||||||||||||    
T  13910999 tgaaaatgagttgatgaacaattcatgctaaattcgtgctcttgttgtgatg 13911050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 122
Target Start/End: Original strand, 20583726 - 20583821
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttg 122  Q
    |||||||||||||||| | ||  || |||||| | |||||| |||||||||||||||||| | ||| | ||| |||||||||||||| ||||||||    
T  20583726 attgatgttgttgttgttaagggatattgttgttgatgattcatggcttgggtgttcataaatcatgatttgatgatgagaaataagttgttgttg 20583821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 129
Target Start/End: Complemental strand, 15358872 - 15358770
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatata-ccataattgttgatgagaaataagatgttgttggttg 126  Q
    |||||||||||||||| | |||  | |||||| | |||||| |||||||||||||||||||| | | | ||| |||||| ||||||| |||||||| |||    
T  15358872 attgatgttgttgttgttaagaagttttgttgttgatgattcatggcttgggtgttcatatatcaagatttgatgatgaaaaataagttgttgttgtttg 15358773  T
Q  127 ttt 129  Q
    |||    
T  15358772 ttt 15358770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 137
Target Start/End: Complemental strand, 48356719 - 48356609
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttggttg 126  Q
    |||||||||||||||||| ||  || |||||| | |||||| |||||||||||||||||| | ||| | ||| ||||||||| | || |||||||| | |    
T  48356719 attgatgttgttgttgctaagtgatattgttgttgatgattcatggcttgggtgttcataaatcatgatttgatgatgagaattgagttgttgttgttgg 48356620  T
Q  127 ttttgtgaaat 137  Q
    |||||| ||||    
T  48356619 ttttgtaaaat 48356609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 228
Target Start/End: Original strand, 48622646 - 48622696
Alignment:
Q  178 gaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatg 228  Q
    ||||||||||||||||||||||| ||||||||| ||||||||  |||||||    
T  48622646 gaaaatgggttgatgaacaattgatgctaaattcgtgctcttactgtgatg 48622696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 217
Target Start/End: Original strand, 18253822 - 18253862
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctc 217  Q
    |||||||||||||||||||||||||| ||||||| ||||||    
T  18253822 tgaaaatgggttgatgaacaattgttactaaattcgtgctc 18253862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 10989686 - 10989635
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatg 228  Q
    ||||||||||||||||||||| |  ||||||||| ||||||||| |||||||    
T  10989686 tgaaaatgggttgatgaacaaatcatgctaaattcgtgctcttgctgtgatg 10989635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 16915100 - 16915159
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcata 87  Q
    |||||||||||||||||| ||  || |||||| | |||||| ||||||||||||||||||    
T  16915100 attgatgttgttgttgctaagtcatattgttgttgatgattcatggcttgggtgttcata 16915159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 122
Target Start/End: Complemental strand, 28390387 - 28390292
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttg 122  Q
    |||||||||||||||| | ||| || |||||| | |||||| || | ||||||||||||| | ||| ||||| ||||||||||| || ||||||||    
T  28390387 attgatgttgttgttgttaagagatattgttgttgatgattcatagtttgggtgttcataaatcatgaattgatgatgagaaatgagttgttgttg 28390292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 132
Target Start/End: Complemental strand, 14940793 - 14940723
Alignment:
Q  63 atgatttatggcttgggtgttcatataccataatt-gttgatgagaaataagatgttgttggttgttttgt 132  Q
    |||||| |||| ||||||||||||| | ||| ||| |||||||||||||||| |||||||| | |||||||    
T  14940793 atgattcatggtttgggtgttcataaatcatgatttgttgatgagaaataagttgttgttgttagttttgt 14940723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 132
Target Start/End: Complemental strand, 15368386 - 15368316
Alignment:
Q  63 atgatttatggcttgggtgttcatataccataatt-gttgatgagaaataagatgttgttggttgttttgt 132  Q
    |||||| |||| ||||||||||||| | ||| ||| |||||||||||||||| |||||||| | |||||||    
T  15368386 atgattcatggtttgggtgttcataaatcatgatttgttgatgagaaataagttgttgttgttagttttgt 15368316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 76
Target Start/End: Complemental strand, 13274862 - 13274814
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggctt 76  Q
    |||||||||||||||||| ||  ||||||||||| |||||| |||||||    
T  13274862 attgatgttgttgttgctaagtgatgttgttgatgatgattcatggctt 13274814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 151; Significance: 5e-80; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 6 - 180
Target Start/End: Original strand, 10778128 - 10778302
Alignment:
Q  6 aatgagatggacatcatatgtcattgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatga 105  Q
    ||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10778128 aatgagatgtaaatcatatgtaattgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatga 10778227  T
Q  106 gaaataagatgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    |||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  10778228 gaaataagatgttggtggtggttttgtgaaattggtgaagttgagttaagtgttcatgtgaaggaccaaattgaa 10778302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 6 - 180
Target Start/End: Complemental strand, 23514659 - 23514485
Alignment:
Q  6 aatgagatggacatcatatgtcattgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatga 105  Q
    ||||||||| | ||||||||| |||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  23514659 aatgagatgtaaatcatatgtaattgatgttgttgttcttgagagatgttgttgattatgatttatggcttgggtgttcatataccataattattgatga 23514560  T
Q  106 gaaataagatgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||| | |||||||||||||||||||||||    
T  23514559 gaaataagatgttgttggtggttttgtgaaattggtgaagttgagttaaatattcatgtgaaggaccaaattgaa 23514485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 28 - 180
Target Start/End: Original strand, 9730563 - 9730715
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatgagaaataagatgttgttggttgt 127  Q
    |||||||||||||||||||||| || |||||| ||||||||||||||||||||||||||||| ||| ||||||  |||||||||||||||||||||| ||    
T  9730563 attgatgttgttgttgctgagacatattgttgtttatgatttatggcttgggtgttcatatatcatgattgtttgtgagaaataagatgttgttggtggt 9730662  T
Q  128 tttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  9730663 tttgtgaaattggtgaagttgagttaagtgttcatgtgaaggaccaaaatgaa 9730715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 28 - 131
Target Start/End: Complemental strand, 7528975 - 7528872
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatgagaaataagatgttgttggttgt 127  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| ||| ||||||| || ||| | ||||||||||||||||    
T  7528975 attgatgttgttgttgctgagatatgttgttgtttatgatttatgacttgggtgttcatatatcatgattgttggtgtgaattgagatgttgttggttgt 7528876  T
Q  128 tttg 131  Q
    ||||    
T  7528875 tttg 7528872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 28 - 137
Target Start/End: Original strand, 109013 - 109123
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatgag-aaataagatgttgttggttg 126  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||| |||| |||| || |||||||||| |    
T  109013 attgatgttgttgttgctgagatatgttgttgattatgaattatggcttgggtgttcatatatcatgattgttgttgagaaaatgagttgttgttggtgg 109112  T
Q  127 ttttgtgaaat 137  Q
    |||||| ||||    
T  109113 ttttgtaaaat 109123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 28 - 137
Target Start/End: Complemental strand, 16105718 - 16105608
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatgag-aaataagatgttgttggttg 126  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||| ||||||| |||| |||| || |||||||||| |    
T  16105718 attgatgttgttgttgctgagatatgttgttgattatgaattatggcttaggtgttcatatatcatgattgttgttgagaaaatgagttgttgttggtgg 16105619  T
Q  127 ttttgtgaaat 137  Q
    |||||| ||||    
T  16105618 ttttgtaaaat 16105608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 95 - 180
Target Start/End: Original strand, 1219767 - 1219852
Alignment:
Q  95 attgttgatgagaaataagatgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    |||| |||||||||||||  |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  1219767 attgatgatgagaaataaattgttgttggtggttttgtgaaattggtgaagttgagttaagtgttcatgtgaaggaccaaagtgaa 1219852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 95 - 180
Target Start/End: Original strand, 22883331 - 22883416
Alignment:
Q  95 attgttgatgagaaataagatgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    |||| |||||||||||||  |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  22883331 attgatgatgagaaataaattgttgttggtggttttgtgaaattggtgaagttgagttaagtgttcatgtgaaggaccaaaatgaa 22883416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 28 - 131
Target Start/End: Complemental strand, 17909580 - 17909478
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatgagaaataagatgttgttggttgt 127  Q
    ||||||||||||| || || || ||||||||| |||||||| |||||||||||||||||||| ||| |||| || |||||||||||||||||||||||||    
T  17909580 attgatgttgttgctgatgcgacatgttgttgtttatgatt-atggcttgggtgttcatatatcatgattggtggtgagaaataagatgttgttggttgt 17909482  T
Q  128 tttg 131  Q
    ||||    
T  17909481 tttg 17909478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 95 - 180
Target Start/End: Original strand, 21932628 - 21932713
Alignment:
Q  95 attgttgatgagaaataagatgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    |||| |||||||||||||  |||||||| | |||||||||||||  ||||||||||||||||||||||||||||||||||| ||||    
T  21932628 attgatgatgagaaataaattgttgttgatggttttgtgaaattagtgaagttgagttaagtgttcatgtgaaggaccaaaatgaa 21932713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 95 - 180
Target Start/End: Original strand, 21938798 - 21938883
Alignment:
Q  95 attgttgatgagaaataagatgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    |||| |||||||||||||  |||||||| | |||||||||||||  ||||||||||||||||||||||||||||||||||| ||||    
T  21938798 attgatgatgagaaataaattgttgttgatggttttgtgaaattagtgaagttgagttaagtgttcatgtgaaggaccaaaatgaa 21938883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 95 - 180
Target Start/End: Complemental strand, 35582045 - 35581960
Alignment:
Q  95 attgttgatgagaaataagatgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    |||| |||||||||||||  |||||||| | |||||||||||||  ||||||||||||||||||||||||||||||||||| ||||    
T  35582045 attgatgatgagaaataaattgttgttgatggttttgtgaaattagtgaagttgagttaagtgttcatgtgaaggaccaaaatgaa 35581960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 95 - 180
Target Start/End: Original strand, 36990017 - 36990102
Alignment:
Q  95 attgttgatgagaaataagatgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    |||| |||||||||||||  |||||||| | |||||||||||||  ||||||||||||||||||||||||||||||||||| ||||    
T  36990017 attgatgatgagaaataaattgttgttgatggttttgtgaaattagtgaagttgagttaagtgttcatgtgaaggaccaaaatgaa 36990102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 1219499 - 1219554
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  1219499 tgaaaatgggttgatgaacaattgttgctaaattcgtgctcttgctgtgatgctat 1219554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 10777949 - 10778004
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  10777949 tgaaaatgggttgatgaacaattgttgctaaattcgtgctcttgctgtgatgctat 10778004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 23514838 - 23514783
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  23514838 tgaaaatgggttgatgaacaattgttgctaaattcgtgctcttgctgtgatgctat 23514783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 136
Target Start/End: Complemental strand, 23493994 - 23493885
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttggttg 126  Q
    |||||||||||||||||| ||  ||||||||||| |||||| ||||||||||||||||||   ||| | ||| |||||||||||||| |||||||| | |    
T  23493994 attgatgttgttgttgctaagtgatgttgttgatgatgattcatggcttgggtgttcataattcatgatttgatgatgagaaataagttgttgttgttgg 23493895  T
Q  127 ttttgtgaaa 136  Q
    ||| ||||||    
T  23493894 tttggtgaaa 23493885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 11212044 - 11212099
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    ||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||    
T  11212044 tgaaaatgggttgatgaacaattcttgctaaattcgtgctcttgctgtgatgctat 11212099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 17471567 - 17471622
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    ||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||    
T  17471567 tgaaaatgggttgatgaacaattgttgataaattcgtgctcttgctgtgatgctat 17471622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 22883063 - 22883118
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    ||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||    
T  22883063 tgaaaatgggttggtgaacaattgttgttaaatttgtgctcttgctgtgatgctat 22883118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 35791077 - 35791128
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatg 228  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  35791077 tgaaaatgggttgatgaacaattgttgctaaattcgtgctcttgctgtgatg 35791128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 7425601 - 7425550
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatg 228  Q
    ||||||||||||||||||||||| |||||||||| ||||||||| |||||||    
T  7425601 tgaaaatgggttgatgaacaattattgctaaattcgtgctcttgctgtgatg 7425550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 21932360 - 21932415
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    ||||||||||||| ||||||||||||| |||||| ||||||||| |||||||||||    
T  21932360 tgaaaatgggttggtgaacaattgttgttaaattcgtgctcttgctgtgatgctat 21932415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 21938530 - 21938585
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    ||||||||||||| ||||||||||||| |||||| ||||||||| |||||||||||    
T  21938530 tgaaaatgggttggtgaacaattgttgttaaattcgtgctcttgctgtgatgctat 21938585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 35582313 - 35582258
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    ||||||||||||| ||||||||||||| |||||| ||||||||| |||||||||||    
T  35582313 tgaaaatgggttggtgaacaattgttgttaaattcgtgctcttgctgtgatgctat 35582258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 136
Target Start/End: Complemental strand, 3673937 - 3673828
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatatacca-taattgttgatgagaaataagatgttgttggttg 126  Q
    |||||||||||||||||| ||  | || |||||| |||||| |||||||||||||||||| | ||  | ||| |||||||||||||| |||||||| | |    
T  3673937 attgatgttgttgttgctaagcgaggtggttgatgatgattcatggcttgggtgttcataaatcacgatttgatgatgagaaataagttgttgttgttgg 3673838  T
Q  127 ttttgtgaaa 136  Q
    ||| ||||||    
T  3673837 tttggtgaaa 3673828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 12651 - 12600
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatg 228  Q
    |||||||||||||||||||||||  ||||||||| ||||||||| |||||||    
T  12651 tgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatg 12600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 136
Target Start/End: Original strand, 5451017 - 5451124
Alignment:
Q  30 tgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttggttgtt 128  Q
    |||||||||||||||| ||  ||||||||||| ||||||  |||||||| || ||||| | ||| | ||| |||||||||||||| |||||||| | |||    
T  5451017 tgatgttgttgttgctaagtgatgttgttgatgatgattcttggcttggatgatcataaatcatgatttgatgatgagaaataagttgttgttgttggtt 5451116  T
Q  129 ttgtgaaa 136  Q
    | ||||||    
T  5451117 tggtgaaa 5451124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 25426905 - 25426854
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatg 228  Q
    |||||||||||||||||||||||  ||||||||| ||||||||| |||||||    
T  25426905 tgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatg 25426854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 36989749 - 36989804
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    ||||||||||||| ||||||||||||| |||||| ||||||| | |||||||||||    
T  36989749 tgaaaatgggttggtgaacaattgttgttaaattcgtgctctagctgtgatgctat 36989804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 134
Target Start/End: Original strand, 23981688 - 23981794
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatgagaaataagatgttgttggttgt 127  Q
    |||||||||||||||||| ||  || |||||| | |||||| ||||||||||||||||||   ||| |||  ||||| |||||||| |||||||  | ||    
T  23981688 attgatgttgttgttgctaagtgatattgttgttgatgattcatggcttgggtgttcataactcatgatttgtgatgtgaaataagttgttgttattggt 23981787  T
Q  128 tttgtga 134  Q
    |||||||    
T  23981788 tttgtga 23981794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 124
Target Start/End: Complemental strand, 7728495 - 7728398
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttggt 124  Q
    |||||||||||||||||| ||  ||||||||||| || |||||| |||||||||| ||||   ||| |||||||| ||||| || || ||||||||||    
T  7728495 attgatgttgttgttgctaagtgatgttgttgatgataatttatcgcttgggtgtgcataattcatgaattgttggtgagagatgaggtgttgttggt 7728398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 29918038 - 29917981
Alignment:
Q  30 tgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcata 87  Q
    |||||||||||||||| ||| || |||||| | |||||| ||||||||||||||||||    
T  29918038 tgatgttgttgttgctaagagatattgttgttgatgattcatggcttgggtgttcata 29917981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 136
Target Start/End: Original strand, 11337358 - 11337465
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatgagaaataagatgttgttggttgt 127  Q
    |||||||||||||||||| ||  |||| |||||| || ||| |||||||| || | |||    ||| ||||||| |||||||| |||||||||||| |||    
T  11337358 attgatgttgttgttgctaagtcatgtcgttgatgataattcatggcttgagtttacatgattcatgattgttgttgagaaatgagatgttgttgg-tgt 11337456  T
Q  128 tttgtgaaa 136  Q
    |||||||||    
T  11337457 tttgtgaaa 11337465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 4199960 - 4200011
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatg 228  Q
    |||||||| ||||||||| ||||  ||||||||| |||||||||||||||||    
T  4199960 tgaaaatgagttgatgaataattcatgctaaattcgtgctcttgttgtgatg 4200011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 122
Target Start/End: Complemental strand, 6456699 - 6456604
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttg 122  Q
    |||||||||||||||| | ||| || | |||| | |||||| |||||||||||||||||  | ||| | ||| |||||||||||||| ||||||||    
T  6456699 attgatgttgttgttgttaagagatatcgttgttgatgattcatggcttgggtgttcatgaatcatgatttgatgatgagaaataagttgttgttg 6456604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 18777967 - 18778018
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatg 228  Q
    |||||||||||||||||||||||  || |||||| ||||||||| |||||||    
T  18777967 tgaaaatgggttgatgaacaattcatgttaaattcgtgctcttgctgtgatg 18778018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 19500176 - 19500125
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatg 228  Q
    |||||||||||||||||||| ||  ||||||||| ||||||||| |||||||    
T  19500176 tgaaaatgggttgatgaacacttcatgctaaattcgtgctcttgctgtgatg 19500125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 21073570 - 21073621
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatg 228  Q
    |||||||||||| ||||||||||  ||||||||| ||||||||| |||||||    
T  21073570 tgaaaatgggttaatgaacaattcatgctaaattcgtgctcttgctgtgatg 21073621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 22366456 - 22366507
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatg 228  Q
    ||||||||||||||||| |||||  ||||||||| ||||||||| |||||||    
T  22366456 tgaaaatgggttgatgagcaattcatgctaaattcgtgctcttgctgtgatg 22366507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 26559987 - 26560046
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcata 87  Q
    |||||||||||||||||| ||| || |||||| | ||||||  |||||||||||||||||    
T  26559987 attgatgttgttgttgctaagagatattgttggtgatgattcttggcttgggtgttcata 26560046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 28902186 - 28902140
Alignment:
Q  135 aattgatgaagttgagttaagtg-ttcatgtgaaggaccaaattgaa 180  Q
    ||||| ||||||||||||||||| |||||||||||||||||| ||||    
T  28902186 aattggtgaagttgagttaagtggttcatgtgaaggaccaaaatgaa 28902140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 28938581 - 28938535
Alignment:
Q  135 aattgatgaagttgagttaagtg-ttcatgtgaaggaccaaattgaa 180  Q
    ||||| ||||||||||||||||| |||||||||||||||||| ||||    
T  28938581 aattggtgaagttgagttaagtggttcatgtgaaggaccaaaatgaa 28938535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 124
Target Start/End: Original strand, 1168376 - 1168473
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcat-ataccataattgttgatgagaaataagatgttgttggt 124  Q
    |||||||||||||||||| ||  ||||||||||| || ||| ||||||||||| | ||| || |   | |||||| |||||||| |||||||||||||    
T  1168376 attgatgttgttgttgctaagtcatgttgttgatgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatgagatgttgttggt 1168473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 136
Target Start/End: Complemental strand, 19873919 - 19873810
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttggttg 126  Q
    |||||||||||||||| | ||| || |||||| | |||||| || ||||||||||||||| | ||| ||||  ||||| ||| |||| |||||||| ||     
T  19873919 attgatgttgttgttgttaagagatattgttgttgatgattcatagcttgggtgttcataaatcatgaatttgtgatgtgaattaagttgttgttgtttt 19873820  T
Q  127 ttttgtgaaa 136  Q
    || |||||||    
T  19873819 ttctgtgaaa 19873810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 147; Significance: 1e-77; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 6 - 180
Target Start/End: Complemental strand, 17148665 - 17148491
Alignment:
Q  6 aatgagatggacatcatatgtcattgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatga 105  Q
    ||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  17148665 aatgagatgtaaatcatatgtaattgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatatatcataattgttgatga 17148566  T
Q  106 gaaataagatgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  17148565 gaaataagatgttggtggtggttttgtgaaattgatgaagttgagttaagtgttcatgtgatggaccaaattgaa 17148491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 28 - 180
Target Start/End: Original strand, 21650220 - 21650372
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatgagaaataagatgttgttggttgt 127  Q
    |||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||| ||| ||||||  |||||||||||||||||||||| ||    
T  21650220 attgatgttgttgttgttgagacatgttgttgtttatgatttatggcttgggtgttcatatatcatgattgtttgtgagaaataagatgttgttggtggt 21650319  T
Q  128 tttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  21650320 tttgtgaaattggtgaagttgagttaagtgttcatgtgaaggaccaaaatgaa 21650372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 95 - 180
Target Start/End: Original strand, 18060005 - 18060090
Alignment:
Q  95 attgttgatgagaaataagatgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    |||| |||||||||||||  |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  18060005 attgatgatgagaaataaattgttgttggtggttttgtgaaattggtgaagttgagttaagtgttcatgtgaaggaccaaaatgaa 18060090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 95 - 180
Target Start/End: Complemental strand, 17004647 - 17004562
Alignment:
Q  95 attgttgatgagaaataagatgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    |||| |||||||||||||  |||||||| | |||||||||||||  ||||||||||||||||||||||||||||||||||| ||||    
T  17004647 attgatgatgagaaataaattgttgttgatggttttgtgaaattagtgaagttgagttaagtgttcatgtgaaggaccaaaatgaa 17004562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 95 - 180
Target Start/End: Original strand, 38055338 - 38055423
Alignment:
Q  95 attgttgatgagaaataagatgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    |||| |||||||||||||  |||||||| | |||||||||||||  ||||||||||||||||||||||||||||||||||| ||||    
T  38055338 attgatgatgagaaataaattgttgttgatggttttgtgaaattagtgaagttgagttaagtgttcatgtgaaggaccaaaatgaa 38055423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 46523666 - 46523611
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  46523666 tgaaaatgggttgatgaacaattgttgctaaattcgtgctcttgttgtgatgctat 46523611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 115 - 180
Target Start/End: Original strand, 44035238 - 44035303
Alignment:
Q  115 tgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    |||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||    
T  44035238 tgttgttggtggttttgtgcaattggtgaagttgagttaagtgttcatgtgaaggaccaaaatgaa 44035303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 144
Target Start/End: Complemental strand, 20177250 - 20177133
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttggttg 126  Q
    |||||||||||||||||| ||  ||||||||||| |||||| ||||||||| | ||||||   ||| | ||||||| ||||||| || |||||||||| |    
T  20177250 attgatgttgttgttgctaagtgatgttgttgatgatgattcatggcttggatattcataattcatgatttgttgaagagaaatgagttgttgttggtgg 20177151  T
Q  127 ttttgtgaaattgatgaa 144  Q
    ||||||||||||| ||||    
T  20177150 ttttgtgaaattggtgaa 20177133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 18059737 - 18059792
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    ||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||    
T  18059737 tgaaaatgggttgatgaacaattgttgttaaattcgtgctcttgctgtgatgctat 18059792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 17004915 - 17004860
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    ||||||||||||| ||||||||||||| |||||| ||||||||| |||||||||||    
T  17004915 tgaaaatgggttggtgaacaattgttgttaaattcgtgctcttgctgtgatgctat 17004860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 17148844 - 17148797
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgt 224  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||    
T  17148844 tgaaaatgggttgatgaacaattgtggctaaattcgtgctcttgttgt 17148797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 22228085 - 22228034
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatg 228  Q
    ||||||||||||||||||||||| |||||||||| ||||||||| |||||||    
T  22228085 tgaaaatgggttgatgaacaattcttgctaaattcgtgctcttgctgtgatg 22228034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 22232782 - 22232731
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatg 228  Q
    ||||||||||||||||||||||| |||||||||| ||||||||| |||||||    
T  22232782 tgaaaatgggttgatgaacaattcttgctaaattcgtgctcttgctgtgatg 22232731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 36356465 - 36356524
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcata 87  Q
    ||||||||||||||| || ||  ||||||||||| |||||||||||||||||||||||||    
T  36356465 attgatgttgttgtttctaagtgatgttgttgatgatgatttatggcttgggtgttcata 36356524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 144
Target Start/End: Original strand, 13377012 - 13377129
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttggttg 126  Q
    |||||||||||||||||| ||  |||||||||||  ||||| |||||||| || ||||||   ||| | ||||||||||||||| |  |||||||||  |    
T  13377012 attgatgttgttgttgctaagtgatgttgttgatgttgattcatggcttgagtattcataattcatgatttgttgatgagaaatgaattgttgttggcgg 13377111  T
Q  127 ttttgtgaaattgatgaa 144  Q
    ||||||||||||| ||||    
T  13377112 ttttgtgaaattggtgaa 13377129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 144
Target Start/End: Original strand, 41229111 - 41229228
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttggttg 126  Q
    |||||||||||||||||| ||  ||||||||| | |||||| |||||||| |||||||||   ||| | |||| |||||||||| || |||||||||| |    
T  41229111 attgatgttgttgttgctaagtgatgttgttgttaatgattcatggcttgagtgttcataattcatgatttgtggatgagaaatgagttgttgttggtag 41229210  T
Q  127 ttttgtgaaattgatgaa 144  Q
    ||| || |||||| ||||    
T  41229211 tttggtaaaattggtgaa 41229228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 5072363 - 5072414
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatg 228  Q
    |||||||||||||||||||||||  ||||||||| ||||||||| |||||||    
T  5072363 tgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatg 5072414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 19962478 - 19962533
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    |||||||||||||||| |||||||||| |||||| ||||||||| ||| |||||||    
T  19962478 tgaaaatgggttgatggacaattgttgttaaattcgtgctcttgctgtaatgctat 19962533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 18601093 - 18601144
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatg 228  Q
    |||||||||||||||||||||||  |||||||||  |||||||| |||||||    
T  18601093 tgaaaatgggttgatgaacaattcatgctaaattcatgctcttgctgtgatg 18601144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 122
Target Start/End: Complemental strand, 21195085 - 21194994
Alignment:
Q  32 atgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttg 122  Q
    |||||||||||| | ||| || |||||| | |||||| |||||||||||||||||| | ||| | ||| ||||||||||| || ||||||||    
T  21195085 atgttgttgttgttaagagatattgttgttgatgattcatggcttgggtgttcataaatcatgatttgatgatgagaaatgagttgttgttg 21194994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 180
Target Start/End: Complemental strand, 21859253 - 21859214
Alignment:
Q  141 tgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    ||||| ||||||||||||||||||||||||||||| ||||    
T  21859253 tgaagatgagttaagtgttcatgtgaaggaccaaaatgaa 21859214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 16656633 - 16656587
Alignment:
Q  135 aattgatgaagttgagttaagtg-ttcatgtgaaggaccaaattgaa 180  Q
    ||||| ||||||||||||||||| |||||||||||||||||| ||||    
T  16656633 aattggtgaagttgagttaagtggttcatgtgaaggaccaaaatgaa 16656587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 122
Target Start/End: Original strand, 49997455 - 49997548
Alignment:
Q  30 tgatgttgttgttgctga-gatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatgagaaataagatgttgttg 122  Q
    |||||||||||||||| | || || |||||| | || ||| |||| || |||||||||| | |||  |||||||||||||||||| ||||||||    
T  49997455 tgatgttgttgttgcttaagagatattgttgttgatcattcatggatttggtgttcataaatcatggttgttgatgagaaataagttgttgttg 49997548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0615 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 28 - 130
Target Start/End: Original strand, 6396 - 6498
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatgagaaataagatgttgttggttgt 127  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  6396 attgatgttgttgatgctgagatatgttgttgattatgatttatggcttgggtgttcatatatcataattgttgatgagaaataagatgttgttggttgt 6495  T
Q  128 ttt 130  Q
    |||    
T  6496 ttt 6498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 28 - 131
Target Start/End: Original strand, 50028 - 50131
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatgagaaataagatgttgttggttgt 127  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||    
T  50028 attgatgttgttgttgctgagatatgttgttgtttatgatttatggcttgggtgttcatatatcatgattgttgatgaaaaataagatgttgttggttgt 50127  T
Q  128 tttg 131  Q
    ||||    
T  50128 tttg 50131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 28 - 132
Target Start/End: Original strand, 5761 - 5865
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatgagaaataagatgttgttggttgt 127  Q
    |||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||  ||| ||||||| |||||||| ||||||||||||||||    
T  5761 attgatgttgttgttgctgagaaatgttgttgtttatgatttatgacttgggtgttcatatgtcatgattgttggtgagaaatgagatgttgttggttgt 5860  T
Q  128 tttgt 132  Q
    |||||    
T  5861 tttgt 5865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 28 - 131
Target Start/End: Complemental strand, 5296 - 5194
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatgagaaataagatgttgttggttgt 127  Q
    |||||||||||||||||||||| ||||||||| |||||||| |||||||||||||||||||| ||| ||||||| | |||||||||||||||||||||||    
T  5296 attgatgttgttgttgctgagacatgttgttgtttatgatt-atggcttgggtgttcatatatcatgattgttggtaagaaataagatgttgttggttgt 5198  T
Q  128 tttg 131  Q
    ||||    
T  5197 tttg 5194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 36 - 131
Target Start/End: Complemental strand, 17768 - 17673
Alignment:
Q  36 tgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatgagaaataagatgttgttggttgttttg 131  Q
    |||||||||||||| | ||||||| ||||||||||||||||||||| ||||||| ||| ||||||| |||||||||||||||||||||||||||||    
T  17768 tgttgttgctgagacaagttgttgtttatgatttatggcttgggtgctcatatatcatgattgttggtgagaaataagatgttgttggttgttttg 17673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 28 - 119
Target Start/End: Complemental strand, 11820 - 11730
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatgagaaataagatgttg 119  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||    
T  11820 attgatgttgttgttgctgagacatgttgttg-ttatgatttatggcttgggtgttcatatatcatgattgttggtgagaaataagatgttg 11730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 28 - 137
Target Start/End: Complemental strand, 130631 - 130521
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatgag-aaataagatgttgttggttg 126  Q
    |||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||| |||| |||| || |||||||||| |    
T  130631 attgatgttgttgttgttgagatatgttgttgattatgaattatggcttgggtgttcatatatcatgattgttgttgagaaaatgagttgttgttggtgg 130532  T
Q  127 ttttgtgaaat 137  Q
    |||||| ||||    
T  130531 ttttgtaaaat 130521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 62; Significance: 7e-27; HSPs: 4)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 95 - 180
Target Start/End: Complemental strand, 39655 - 39570
Alignment:
Q  95 attgttgatgagaaataagatgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    |||| |||||||||||||  |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  39655 attgatgatgagaaataatttgttgttggtggttttgtgaaattggtgaagttgagttaagtgttcatgtgaaggaccaaagtgaa 39570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 95 - 180
Target Start/End: Complemental strand, 31318 - 31233
Alignment:
Q  95 attgttgatgagaaataagatgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    |||| |||||||||||||  |||||||| | |||||||||||||  ||||||||||||||||||||||||||||||||||| ||||    
T  31318 attgatgatgagaaataaattgttgttgatggttttgtgaaattagtgaagttgagttaagtgttcatgtgaaggaccaaaatgaa 31233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 39923 - 39868
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||| ||||    
T  39923 tgaaaatgggttgatgaacaattgttgctaaattcgtgctcttgctgtgattctat 39868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 31586 - 31531
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    ||||||||||||| ||||||||||||| |||||| ||||||||| |||||||||||    
T  31586 tgaaaatgggttggtgaacaattgttgttaaattcgtgctcttgctgtgatgctat 31531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 95 - 180
Target Start/End: Complemental strand, 39112 - 39027
Alignment:
Q  95 attgttgatgagaaataagatgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    |||| |||||||||||||  |||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  39112 attgatgatgagaaataaattgttgttgatggttttgtgaaattggtgaagttgagttaagtgttcatgtgaaggaccaaaatgaa 39027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 39380 - 39325
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    ||||||||||||| ||||||||||||| |||||| ||||||||| |||||||||||    
T  39380 tgaaaatgggttggtgaacaattgttgttaaattcgtgctcttgctgtgatgctat 39325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 58; Significance: 2e-24; HSPs: 4)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 95 - 180
Target Start/End: Original strand, 154254 - 154339
Alignment:
Q  95 attgttgatgagaaataagatgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    |||| |||||||||||||  ||||| |||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  154254 attgatgatgagaaataaattgttgatggtggttttgtgaaattggtgaagttgagttaagtgttcatgtgaaggaccaaaatgaa 154339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 153986 - 154041
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  153986 tgaaaatgggttgatgaacaattgttgctaaattcgtgctcttgctgtgatgctat 154041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 169887 - 169938
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatg 228  Q
    |||||||||||||||||||||||  ||||||||| ||||||||| |||||||    
T  169887 tgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatg 169938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 36370 - 36319
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatg 228  Q
    ||||| |||||||||||||||||  ||||||||| |||||||||| ||||||    
T  36370 tgaaactgggttgatgaacaattcatgctaaattcgtgctcttgtagtgatg 36319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 28 - 131
Target Start/End: Original strand, 165146 - 165245
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatgagaaataagatgttgttggttgt 127  Q
    |||||||||||||||||||||| ||||||||   ||||||| |||||||||||||||||||| ||| ||||||| ||||||| |||||| ||||||||||    
T  165146 attgatgttgttgttgctgagacatgttgtt---tatgatt-atggcttgggtgttcatatatcatgattgttggtgagaaaaaagatgatgttggttgt 165241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 95 - 173
Target Start/End: Complemental strand, 29171 - 29093
Alignment:
Q  95 attgttgatgagaaataagatgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggacca 173  Q
    |||| |||||||| ||||  |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  29171 attgatgatgagatataaattgttgttggtggttttgtgaaattggtgaagttgagttaagtgttcatgtgaaggacca 29093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 29439 - 29384
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    ||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||    
T  29439 tgaaaatgggttgatgaacaattgttgttaaattcgtgctcttgctgtgatgctat 29384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 115 - 180
Target Start/End: Original strand, 31548 - 31613
Alignment:
Q  115 tgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  31548 tgttgttggtggttttgtgaaattggtgaagttgagttaagtgttcatgtgaaggaccaaaatgaa 31613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 115 - 180
Target Start/End: Complemental strand, 41296 - 41231
Alignment:
Q  115 tgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  41296 tgttgttggtggttttgtgaaattggtgaagttgagttaagtgttcatgtgaaggaccaaaatgaa 41231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 51 - 131
Target Start/End: Original strand, 34597 - 34677
Alignment:
Q  51 atgttgttgattatgatttatggcttgggtgttcatataccataattgttgatgagaaataagatgttgttggttgttttg 131  Q
    ||||||||| |||||||||||| |||||||||||||||| ||| ||||||| |||||| | ||||||||||||||||||||    
T  34597 atgttgttgtttatgatttatgacttgggtgttcatataacatgattgttggtgagaattgagatgttgttggttgttttg 34677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 115 - 180
Target Start/End: Original strand, 6351 - 6416
Alignment:
Q  115 tgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||    
T  6351 tgttgttggtggttttgtgaaattggtgaagttgagttaagtgttcatgagaaggaccaaaatgaa 6416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 50; Significance: 1e-19; HSPs: 3)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 115 - 180
Target Start/End: Original strand, 162447 - 162512
Alignment:
Q  115 tgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    |||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||||| ||||    
T  162447 tgttgttggtggttttgtgaaattggtgaaattgagttaagtgttcatgtgaaggaccaaaatgaa 162512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 115 - 180
Target Start/End: Original strand, 166525 - 166590
Alignment:
Q  115 tgttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    |||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||||| ||||    
T  166525 tgttgttggtggttttgtgaaattggtgaaattgagttaagtgttcatgtgaaggaccaaaatgaa 166590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 144
Target Start/End: Original strand, 116687 - 116802
Alignment:
Q  30 tgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttggttgtt 128  Q
    |||||||||||||||| ||  || |||||| | |||||| ||||||||||||||||||   ||| | |||||||||| ||||    |||||||||| |||    
T  116687 tgatgttgttgttgctaagtgatattgttgttgatgattcatggcttgggtgttcataattcatgatttgttgatgaaaaatggattgttgttggtggtt 116786  T
Q  129 ttgtgaaattgatgaa 144  Q
    |||| |||||| ||||    
T  116787 ttgtaaaattggtgaa 116802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1500 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold1500
Description:

Target: scaffold1500; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 66
Target Start/End: Original strand, 1672 - 1732
Alignment:
Q  6 aatgagatggacatcatatgtcattgatgttgttgttgctgagatatgttgttgattatga 66  Q
    ||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  1672 aatgagatgtaaatcatatgtaattgatgttgttgttgctgagatatgttgttgattatga 1732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1500; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 1493 - 1548
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  1493 tgaaaatgggttgatgaacaattgttgctaaattcgtgctcttgttgtaatgctat 1548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 3999 - 3944
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  3999 tgaaaatgggttgatgaacaattcttgctaaattcgtgctcttgttgtgatgctat 3944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 10727 - 10778
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatg 228  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  10727 tgaaaatgggttgatgaacaattgttgctaaattcgtgctcttgttgtgatg 10778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0970 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0970
Description:

Target: scaffold0970; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 136
Target Start/End: Complemental strand, 2530 - 2421
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcat-ataccataattgttgatgagaaataagatgttgttggttg 126  Q
    |||||||||||||||||| ||  ||||||||| | |||||| ||||||||||| ||||| || || || ||| |||||||||||||| |||||||| | |    
T  2530 attgatgttgttgttgctaagtgatgttgttgttgatgattcatggcttgggtattcataattccttatttgatgatgagaaataagttgttgttgttgg 2431  T
Q  127 ttttgtgaaa 136  Q
    ||||||||||    
T  2430 ttttgtgaaa 2421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 117 - 180
Target Start/End: Original strand, 721 - 783
Alignment:
Q  117 ttgttggttgttttgtgaaattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    |||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||    
T  721 ttgttggtggttttgtgaa-ttggtgaagttgagttaagtgttcatgtgaaggaccaaaatgaa 783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 136
Target Start/End: Complemental strand, 6015 - 5906
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttggttg 126  Q
    |||||||||||||||||| ||  || |||||| | |||||| |||||||| |||||||||  |||| | ||| ||||| |||||||| |||||||| | |    
T  6015 attgatgttgttgttgctaagtgatattgttgttgatgattcatggcttgagtgttcataatccatgatttgatgatgtgaaataagttgttgttgttgg 5916  T
Q  127 ttttgtgaaa 136  Q
    ||| ||||||    
T  5915 tttggtgaaa 5906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 7435 - 7490
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    ||||||||||||||||||||||| || ||||||| |||||||||||||||||||||    
T  7435 tgaaaatgggttgatgaacaattattactaaattcgtgctcttgttgtgatgctat 7490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 21091 - 21142
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatg 228  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  21091 tgaaaatgggttgatgaacaattcttgctaaattcgtgctcttgttgtgatg 21142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 122
Target Start/End: Complemental strand, 108085 - 107991
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatgagaaataagatgttgttg 122  Q
    |||||||||||||||| | |||||| |||||| | |||||| || ||||||||||||||| | ||| | | ||||||||||||||| ||||||||    
T  108085 attgatgttgttgttgttaagatatattgttgttgatgattcatagcttgggtgttcataaatcatgaattttgatgagaaataagttgttgttg 107991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 135 - 180
Target Start/End: Original strand, 15910 - 15955
Alignment:
Q  135 aattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  15910 aattgatgaagttgagttaagtgttcatgtgaaggaccaaaatgaa 15955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 132
Target Start/End: Complemental strand, 6619 - 6514
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataatt-gttgatgagaaataagatgttgttggttg 126  Q
    ||||||| |||||||||| ||| || |||||| | |||||| ||||||| |||||||||| | ||| ||| | |||||||||||||| |||||||| | |    
T  6619 attgatgatgttgttgctaagagatattgttgttgatgattcatggcttaggtgttcataaatcatgatttgatgatgagaaataagttgttgttgttgg 6520  T
Q  127 ttttgt 132  Q
    ||||||    
T  6519 ttttgt 6514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 144
Target Start/End: Original strand, 77019 - 77136
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataatt-gttgatgagaaataagatgttgttggttg 126  Q
    |||||||||||||||||| ||  || |||||  | |||||| ||||||||||| ||||||   ||| ||| ||||||||||||| || |||||||||| |    
T  77019 attgatgttgttgttgctaagtgatattgttattgatgattcatggcttgggtattcataattcatgatttgttgatgagaaatgagttgttgttggtgg 77118  T
Q  127 ttttgtgaaattgatgaa 144  Q
    ||||||||||||| ||||    
T  77119 ttttgtgaaattggtgaa 77136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 1554 - 1609
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    |||||||||||||||||||||||||||||||| | |||| |||| |||||||||||    
T  1554 tgaaaatgggttgatgaacaattgttgctaaaatcgtgcacttgctgtgatgctat 1609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 3239 - 3188
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatg 228  Q
    ||||||||||||||||||||||| |||||||||| ||||||||| |||||||    
T  3239 tgaaaatgggttgatgaacaattcttgctaaattcgtgctcttgctgtgatg 3188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0521 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0521
Description:

Target: scaffold0521; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 122
Target Start/End: Complemental strand, 11169 - 11074
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttg 122  Q
    ||||||||||||||||||  |  ||||||||| |||||||| ||||||| |||||||||| | ||| | ||| |||||||||||||| ||||||||    
T  11169 attgatgttgttgttgctatgtgatgttgttgtttatgattcatggcttaggtgttcatagatcatgatttgatgatgagaaataagttgttgttg 11074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0521; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 10922 - 10877
Alignment:
Q  135 aattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||    
T  10922 aattggtgaagttgagttaagtgttcatgtgaaggaccaaaatgaa 10877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 10318 - 10369
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatg 228  Q
    |||||||||||||||||| ||||||||||||||| ||||||||| |||||||    
T  10318 tgaaaatgggttgatgaataattgttgctaaattcgtgctcttgctgtgatg 10369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 122
Target Start/End: Original strand, 1118 - 1213
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttg 122  Q
    |||||||||||||||||| ||  || |||||| | |||||| |||||||||||||||||| | ||| | ||| |||||||||||||| ||||||||    
T  1118 attgatgttgttgttgctaaggaatattgttgttgatgattcatggcttgggtgttcataaatcatgatttgatgatgagaaataagttgttgttg 1213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 2669 - 2614
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    ||||||||||||||||||||||||||||| |||| |||||||||  ||||||||||    
T  2669 tgaaaatgggttgatgaacaattgttgctcaattcgtgctcttgccgtgatgctat 2614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 136
Target Start/End: Complemental strand, 7243 - 7137
Alignment:
Q  31 gatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttggttgttt 129  Q
    ||||||||||||||| ||  || |||||| | |||||| ||||||||||||||||||  |||| | ||| ||||| |||||||| |||||||| | ||||    
T  7243 gatgttgttgttgctaagtgatattgttgttgatgattcatggcttgggtgttcataatccatgatttgatgatgtgaaataagttgttgttgttggttt 7144  T
Q  130 tgtgaaa 136  Q
     ||||||    
T  7143 ggtgaaa 7137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 45307 - 45252
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    |||||||||||||||||| |||||||| |||||| |||| ||||||||||||||||    
T  45307 tgaaaatgggttgatgaataattgttgttaaattcgtgcccttgttgtgatgctat 45252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 54693 - 54638
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    |||||||||||||||||| |||||||| |||||| |||  |||| |||||||||||    
T  54693 tgaaaatgggttgatgaataattgttgttaaattcgtgtccttgctgtgatgctat 54638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 33 - 144
Target Start/End: Original strand, 13472 - 13582
Alignment:
Q  33 tgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatgagaaataagatgttgttggttgttttgt 132  Q
    ||||||||||| ||| | ||||||||| |||||||| |||||||||||||| ||||| ||| ||| ||| ||||||||    ||||||| || |||||||    
T  13472 tgttgttgttgttgatacatgttgttgtttatgatt-atggcttgggtgttgatatatcatgattcttgttgagaaatggattgttgttagtggttttgt 13570  T
Q  133 gaaattgatgaa 144  Q
    ||||||| ||||    
T  13571 gaaattggtgaa 13582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 5191 - 5246
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    ||||||||||||||||||||||| ||| |||||| ||||||||| |||||||||||    
T  5191 tgaaaatgggttgatgaacaattcttgttaaattcgtgctcttgctgtgatgctat 5246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 137
Target Start/End: Complemental strand, 28611 - 28501
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttggttg 126  Q
    |||||||||||||||||| ||  ||||||||| | |||||| ||||||||||||||||||   ||| | || ||| |||||||| || |||||||||| |    
T  28611 attgatgttgttgttgctaagtgatgttgttgttaatgattcatggcttgggtgttcataattcatgatttattggtgagaaatgagttgttgttggtgg 28512  T
Q  127 ttttgtgaaat 137  Q
    |||||| ||||    
T  28511 ttttgtaaaat 28501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 137
Target Start/End: Original strand, 43970 - 44080
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttggttg 126  Q
    |||||||||||||||||| ||  || |||||| | |||||| |||||||||||||||||| | ||| | ||| ||||||||||| || |||||||| | |    
T  43970 attgatgttgttgttgctaagtgatattgttgttgatgattcatggcttgggtgttcataaatcatgatttgatgatgagaaatgagttgttgttgttgg 44069  T
Q  127 ttttgtgaaat 137  Q
    |||||| ||||    
T  44070 ttttgtaaaat 44080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 136
Target Start/End: Complemental strand, 4638 - 4529
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttggttg 126  Q
    |||||||||||||||||| ||  || |||||| | |||||| ||||||||||||||||||  |||| | ||| ||||| |||||||| |||||||| | |    
T  4638 attgatgttgttgttgctaagtgatattgttgttgatgattcatggcttgggtgttcataatccatgatttgatgatgtgaaataagttgttgttgttgg 4539  T
Q  127 ttttgtgaaa 136  Q
    ||| ||||||    
T  4538 tttggtgaaa 4529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 136
Target Start/End: Complemental strand, 9252 - 9143
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttggttg 126  Q
    |||||||||||||||||| ||  || |||||| | |||||| ||||||||||||||||||  |||| | ||| ||||| |||||||| |||||||| | |    
T  9252 attgatgttgttgttgctaagtgatattgttgttgatgattcatggcttgggtgttcataatccatgatttgatgatgtgaaataagttgttgttgttgg 9153  T
Q  127 ttttgtgaaa 136  Q
    ||| ||||||    
T  9152 tttggtgaaa 9143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 144
Target Start/End: Complemental strand, 5016 - 4899
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttggttg 126  Q
    |||||||||||||||||| ||  ||||||||||| || ||| ||||||||| ||||||||   ||| | ||| |||||||||||    |||||||||| |    
T  5016 attgatgttgttgttgctaagtcatgttgttgatgataattcatggcttggttgttcataattcatgatttgctgatgagaaatggattgttgttggtgg 4917  T
Q  127 ttttgtgaaattgatgaa 144  Q
    ||||||||||||| ||||    
T  4916 ttttgtgaaattggtgaa 4899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 135 - 180
Target Start/End: Original strand, 19345 - 19390
Alignment:
Q  135 aattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||    
T  19345 aattggtgaagttgagttaagtgttcatgtgaaggaccaaaatgaa 19390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 38; Significance: 0.000000000001; HSPs: 4)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 40491 - 40446
Alignment:
Q  135 aattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||    
T  40491 aattggtgaagttgagttaagtgttcatgtgaaggaccaaaatgaa 40446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 45974 - 45929
Alignment:
Q  135 aattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    ||||| ||||||| ||||||||||||||||||||||||||| ||||    
T  45974 aattggtgaagttaagttaagtgttcatgtgaaggaccaaaatgaa 45929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 87
Target Start/End: Complemental strand, 40730 - 40674
Alignment:
Q  31 gatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcata 87  Q
    ||||||||||||||| ||  || |||||| | |||||| ||||||||||||||||||    
T  40730 gatgttgttgttgctaagtgatattgttgttgatgattcatggcttgggtgttcata 40674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 175
Target Start/End: Complemental strand, 79672 - 79632
Alignment:
Q  135 aattgatgaagttgagttaagtgttcatgtgaaggaccaaa 175  Q
    ||||| ||||||| |||||||||||||||||||||| ||||    
T  79672 aattggtgaagttaagttaagtgttcatgtgaaggatcaaa 79632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 230
Target Start/End: Complemental strand, 54151 - 54098
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgct 230  Q
    |||||||||||||||||||||||| ||||||||| ||||||||  |||||||||    
T  54151 tgaaaatgggttgatgaacaattgatgctaaattcgtgctcttactgtgatgct 54098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 180 - 232
Target Start/End: Original strand, 34140 - 34192
Alignment:
Q  180 aaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatgctat 232  Q
    ||||||||||||||| ||||||||||||||| ||||||||| ||||| |||||    
T  34140 aaatgggttgatgaaaaattgttgctaaattcgtgctcttgctgtgaagctat 34192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1711 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1711
Description:

Target: scaffold1711; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 1279 - 1330
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatg 228  Q
    |||||||||||||||||||||||  ||||||||| ||||||||| |||||||    
T  1279 tgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatg 1330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0892 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0892
Description:

Target: scaffold0892; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 3690 - 3639
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatg 228  Q
    |||||||||||||||||||||||| ||||||||| ||||||||  |||||||    
T  3690 tgaaaatgggttgatgaacaattgatgctaaattagtgctcttactgtgatg 3639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 122
Target Start/End: Complemental strand, 37633 - 37538
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttg 122  Q
    |||||||||||||||| | ||| || |||||| | |||||| || ||||||||||||||| | ||| ||||| ||||||||||| || ||||||||    
T  37633 attgatgttgttgttgttaagagatattgttgttgatgattcatagcttgggtgttcataaatcatgaattgatgatgagaaatgagttgttgttg 37538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 129
Target Start/End: Complemental strand, 4680 - 4578
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatata-ccataattgttgatgagaaataagatgttgttggttg 126  Q
    |||||||||||||||| | |||  | |||||| | |||||| |||||||||||||||||||| | | | ||| |||||| ||||||| |||||||| |||    
T  4680 attgatgttgttgttgttaagaagttttgttgttgatgattcatggcttgggtgttcatatatcaagatttgatgatgaaaaataagttgttgttgtttg 4581  T
Q  127 ttt 129  Q
    |||    
T  4580 ttt 4578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 137
Target Start/End: Complemental strand, 69532 - 69422
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttggttg 126  Q
    |||||||||||||||||| ||  || |||||| | |||||| |||||||||||||||||| | ||| | ||| ||||||||| | || |||||||| | |    
T  69532 attgatgttgttgttgctaagtgatattgttgttgatgattcatggcttgggtgttcataaatcatgatttgatgatgagaattgaggtgttgttgttgg 69433  T
Q  127 ttttgtgaaat 137  Q
    |||||| ||||    
T  69432 ttttgtaaaat 69422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0670 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0670
Description:

Target: scaffold0670; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 136
Target Start/End: Original strand, 7847 - 7956
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttggttg 126  Q
    |||||||||||||||| | ||| || |||||| | |||||| || ||||||||||||||| | ||| | ||  ||||| |||||||| |||||||| | |    
T  7847 attgatgttgttgttgttaagagatattgttgttgatgattcatagcttgggtgttcataaatcatgagtttgtgatgtgaaataagttgttgttgttgg 7946  T
Q  127 ttttgtgaaa 136  Q
    ||||||||||    
T  7947 ttttgtgaaa 7956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0253
Description:

Target: scaffold0253; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 132
Target Start/End: Complemental strand, 7477 - 7372
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttggttg 126  Q
    |||||||||| ||||||| ||| || |||||| | |||||| |||||||||||  ||||| | ||| | ||| |||||||||||||| |||||||| | |    
T  7477 attgatgttggtgttgctaagagatattgttgctaatgattcatggcttgggtactcataaatcatgatttgatgatgagaaataagttgttgttgttgg 7378  T
Q  127 ttttgt 132  Q
    ||||||    
T  7377 ttttgt 7372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 132
Target Start/End: Complemental strand, 16902 - 16797
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttggttg 126  Q
    |||||||||| ||||||| ||| || |||||| | |||||| |||||||||||  ||||| | ||| | ||| |||||||||||||| |||||||| | |    
T  16902 attgatgttggtgttgctaagagatattgttgctaatgattcatggcttgggtactcataaatcatgatttgatgatgagaaataagttgttgttgttgg 16803  T
Q  127 ttttgt 132  Q
    ||||||    
T  16802 ttttgt 16797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 136
Target Start/End: Original strand, 2488 - 2597
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttggttg 126  Q
    ||||||||||||||| || ||  ||||||||||| |||||| |||||||||| |||||||   |||   ||| |||||||||||||| |||||||| | |    
T  2488 attgatgttgttgttcctaagtgatgttgttgatgatgattcatggcttgggcgttcataattcatgttttgatgatgagaaataagttgttgttgttgg 2587  T
Q  127 ttttgtgaaa 136  Q
    ||| ||||||    
T  2588 tttggtgaaa 2597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 33474 - 33429
Alignment:
Q  135 aattgatgaagttgagttaagtgttcatgtgaaggaccaaattgaa 180  Q
    ||||| ||||||| ||||||||||||||||||||||||||| ||||    
T  33474 aattggtgaagttaagttaagtgttcatgtgaaggaccaaaatgaa 33429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 144
Target Start/End: Complemental strand, 35553 - 35437
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttggttg 126  Q
    ||||||||| |||||||| ||  ||||||||| | |||||| ||||||||||| ||||||   ||| | ||||||||||||||| || || ||||||| |    
T  35553 attgatgtttttgttgctaagtgatgttgttgttgatgattcatggcttgggtattcataattcatgatttgttgatgagaaatgagttg-tgttggtgg 35455  T
Q  127 ttttgtgaaattgatgaa 144  Q
    |||||| |||||| ||||    
T  35454 ttttgtaaaattggtgaa 35437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 136
Target Start/End: Original strand, 68058 - 68162
Alignment:
Q  32 atgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatgagaaataagatgttgttggttgttttg 131  Q
    |||||||||||| | |||||  |||||| | ||||||||| ||||||||||||||| | ||| | |  ||||| ||| |||| |||||||| | ||||||    
T  68058 atgttgttgttgttaagatacattgttgttgatgatttatagcttgggtgttcataaatcatgagttgtgatgtgaagtaagttgttgttgttggttttg 68157  T
Q  132 tgaaa 136  Q
    |||||    
T  68158 tgaaa 68162  T

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Target: scaffold0026 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 217
Target Start/End: Complemental strand, 108023 - 107983
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctc 217  Q
    |||||||||||||||||||||||||| ||||||| ||||||    
T  108023 tgaaaatgggttgatgaacaattgttactaaattcgtgctc 107983  T

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Target: scaffold0026; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 136
Target Start/End: Original strand, 90039 - 90125
Alignment:
Q  51 atgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttggttgttttgtgaaa 136  Q
    ||||||||| | |||||| ||| |||||||||||||| | ||| | ||| |||||||||||||| |||||||| | |||| ||||||    
T  90039 atgttgttgttgatgattcatgacttgggtgttcataaatcatgatttgatgatgagaaataagttgttgttgttggtttggtgaaa 90125  T

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Target: scaffold0598 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 122
Target Start/End: Complemental strand, 3327 - 3232
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttg 122  Q
    |||||||||||||||| | ||| || |||||| | |||||| || ||||||||||||||| | ||| | ||| ||||| |||||||| ||||||||    
T  3327 attgatgttgttgttgttaagagatattgttgttgatgattcatagcttgggtgttcataaatcatgagttgatgatgtgaaataagttgttgttg 3232  T

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Target: scaffold0516 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 220
Target Start/End: Original strand, 12106 - 12149
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttg 220  Q
    |||||||||||||||||||||||| || |||||| |||||||||    
T  12106 tgaaaatgggttgatgaacaattgatgttaaattcgtgctcttg 12149  T

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Target: scaffold0008 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 31650 - 31701
Alignment:
Q  177 tgaaaatgggttgatgaacaattgttgctaaatttgtgctcttgttgtgatg 228  Q
    |||||||| ||||||||||||||  ||||||||| |||||||||| ||||||    
T  31650 tgaaaatgagttgatgaacaattcatgctaaattcgtgctcttgtggtgatg 31701  T

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Target: scaffold1204 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1204
Description:

Target: scaffold1204; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 180
Target Start/End: Original strand, 344 - 390
Alignment:
Q  135 aattgatgaagttgagttaagtg-ttcatgtgaaggaccaaattgaa 180  Q
    ||||| ||||||||||||||||| |||||||||||||||||| ||||    
T  344 aattggtgaagttgagttaagtggttcatgtgaaggaccaaaatgaa 390  T

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Target: scaffold1272 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1272
Description:

Target: scaffold1272; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 132
Target Start/End: Complemental strand, 384 - 279
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataatt-gttgatgagaaataagatgttgttggttg 126  Q
    |||||||||||||||||| ||  ||||| ||| | || ||| ||| |||||||| |||||   ||| ||| ||||||||||||| || |||||||||| |    
T  384 attgatgttgttgttgctaagtgatgtttttgttgattattcatgccttgggtgctcataattcatgatttgttgatgagaaatgagttgttgttggtgg 285  T
Q  127 ttttgt 132  Q
    ||||||    
T  284 ttttgt 279  T

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Target: scaffold0833 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0833
Description:

Target: scaffold0833; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 137
Target Start/End: Complemental strand, 3374 - 3265
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatataccataattgttgatgagaaataagatgttgttggttgt 127  Q
    |||||||||||||||| |  |  ||||||||||| || ||| ||||||||||| | |||    ||| ||||||| |||||||| || |||||||||| ||    
T  3374 attgatgttgttgttgatatgtcatgttgttgatgataattcatggcttgggtttgcatgattcatgattgttgttgagaaatgagttgttgttggtggt 3275  T
Q  128 tttgtgaaat 137  Q
    ||||| ||||    
T  3274 tttgtaaaat 3265  T

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Target: scaffold0610 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 748 - 800
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggt 80  Q
    |||||||||||||||||| ||  ||||||||||| || ||| |||||||||||    
T  748 attgatgttgttgttgctaagtcatgttgttgatgataattcatggcttgggt 800  T

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Target: scaffold0095 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 33900 - 33952
Alignment:
Q  28 attgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggt 80  Q
    |||||||||||||||||| ||  ||||||||||| || ||| |||||||||||    
T  33900 attgatgttgttgttgctaagtgatgttgttgataataattcatggcttgggt 33952  T

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Target: scaffold0003 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 125
Target Start/End: Complemental strand, 147602 - 147530
Alignment:
Q  54 ttgttgattatgatttatggcttgggtgttcatataccat-aattgttgatgagaaataagatgttgttggtt 125  Q
    |||||| | |||||| ||||||||||||||||||  |||| | ||| ||||| |||||||| |||||||||||    
T  147602 ttgttgttgatgattcatggcttgggtgttcataatccatgatttgatgatgtgaaataagttgttgttggtt 147530  T

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