View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10140A_low_299 (Length: 247)

Name: NF10140A_low_299
Description: NF10140A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10140A_low_299
NF10140A_low_299
[»] chr1 (36 HSPs)
chr1 (36-139)||(31636512-31636615)
chr1 (36-136)||(4448013-4448114)
chr1 (36-120)||(14884668-14884752)
chr1 (39-139)||(50270778-50270878)
chr1 (23-137)||(44573835-44573949)
chr1 (44-126)||(15457023-15457105)
chr1 (41-138)||(5300458-5300555)
chr1 (23-139)||(23625149-23625266)
chr1 (60-139)||(14395977-14396056)
chr1 (36-138)||(38865351-38865453)
chr1 (23-138)||(19512895-19513010)
chr1 (44-139)||(42483687-42483782)
chr1 (42-120)||(32913925-32914003)
chr1 (42-127)||(42401060-42401145)
chr1 (35-139)||(44415939-44416042)
chr1 (23-94)||(23740163-23740234)
chr1 (40-139)||(35615452-35615550)
chr1 (44-138)||(45467642-45467736)
chr1 (36-113)||(31206308-31206384)
chr1 (31-103)||(1774982-1775054)
chr1 (42-138)||(44240415-44240511)
chr1 (36-127)||(5827593-5827684)
chr1 (60-121)||(3582769-3582830)
chr1 (23-103)||(6704145-6704224)
chr1 (41-120)||(7789778-7789857)
chr1 (60-139)||(33259432-33259511)
chr1 (60-139)||(33279591-33279670)
chr1 (61-119)||(42489059-42489117)
chr1 (57-120)||(5040953-5041016)
chr1 (36-107)||(43177815-43177886)
chr1 (53-134)||(31827205-31827286)
chr1 (51-120)||(51244074-51244143)
chr1 (42-102)||(33726878-33726938)
chr1 (42-127)||(33780530-33780615)
chr1 (57-101)||(23333846-23333890)
chr1 (36-127)||(30335687-30335776)
[»] chr6 (10 HSPs)
chr6 (36-136)||(378616-378716)
chr6 (23-139)||(6793862-6793978)
chr6 (36-139)||(11703143-11703246)
chr6 (51-130)||(29383422-29383501)
chr6 (41-120)||(30250384-30250463)
chr6 (62-139)||(4405691-4405768)
chr6 (42-101)||(7693901-7693960)
chr6 (35-89)||(24150122-24150176)
chr6 (40-80)||(17095969-17096009)
chr6 (46-90)||(32025620-32025664)
[»] chr8 (19 HSPs)
chr8 (36-139)||(38901203-38901305)
chr8 (37-139)||(17793313-17793415)
chr8 (23-138)||(14728877-14728992)
chr8 (46-138)||(7176678-7176770)
chr8 (44-138)||(26705754-26705848)
chr8 (35-121)||(30905530-30905616)
chr8 (51-139)||(32953204-32953292)
chr8 (60-127)||(10288091-10288158)
chr8 (61-139)||(41123319-41123397)
chr8 (44-123)||(7573076-7573155)
chr8 (35-138)||(29416658-29416761)
chr8 (36-107)||(37187590-37187661)
chr8 (36-121)||(24848970-24849059)
chr8 (57-104)||(44104220-44104267)
chr8 (36-127)||(18807044-18807135)
chr8 (42-101)||(31226448-31226507)
chr8 (42-120)||(7207043-7207121)
chr8 (23-61)||(14581174-14581212)
chr8 (36-92)||(28557342-28557398)
[»] chr7 (29 HSPs)
chr7 (39-139)||(41003344-41003444)
chr7 (41-137)||(10249013-10249110)
chr7 (36-121)||(30224753-30224838)
chr7 (41-139)||(957986-958084)
chr7 (40-130)||(33987809-33987899)
chr7 (44-138)||(46208996-46209090)
chr7 (38-129)||(27816504-27816595)
chr7 (36-132)||(42710459-42710555)
chr7 (38-127)||(5532734-5532824)
chr7 (36-120)||(33882117-33882202)
chr7 (23-105)||(9153768-9153847)
chr7 (36-127)||(25795794-25795886)
chr7 (36-123)||(17603788-17603875)
chr7 (44-107)||(34967990-34968053)
chr7 (36-139)||(44483962-44484064)
chr7 (38-120)||(36655751-36655833)
chr7 (62-139)||(22074306-22074383)
chr7 (60-112)||(37503956-37504008)
chr7 (44-123)||(23307835-23307914)
chr7 (31-101)||(39837576-39837646)
chr7 (36-96)||(44237975-44238035)
chr7 (31-83)||(42988371-42988423)
chr7 (61-120)||(9486812-9486871)
chr7 (41-104)||(43788608-43788671)
chr7 (58-92)||(23801826-23801860)
chr7 (69-127)||(31386888-31386946)
chr7 (42-120)||(33815907-33815985)
chr7 (57-102)||(43302112-43302157)
chr7 (40-104)||(584149-584213)
[»] chr5 (26 HSPs)
chr5 (36-139)||(33207470-33207572)
chr5 (23-121)||(37194315-37194413)
chr5 (38-137)||(4277372-4277471)
chr5 (38-139)||(39324047-39324148)
chr5 (36-138)||(8433720-8433822)
chr5 (36-127)||(30471797-30471888)
chr5 (36-127)||(13417231-13417322)
chr5 (35-127)||(5367762-5367856)
chr5 (72-139)||(7053581-7053648)
chr5 (36-138)||(25768205-25768307)
chr5 (36-120)||(2552507-2552590)
chr5 (23-127)||(4942375-4942479)
chr5 (36-120)||(38037431-38037515)
chr5 (36-127)||(5495586-5495677)
chr5 (61-129)||(32534881-32534951)
chr5 (36-114)||(26148939-26149017)
chr5 (36-73)||(7053795-7053832)
chr5 (59-120)||(33494723-33494783)
chr5 (42-108)||(606403-606469)
chr5 (60-109)||(15635250-15635299)
chr5 (42-139)||(15072114-15072207)
chr5 (60-127)||(10933539-10933606)
chr5 (42-101)||(19494985-19495044)
chr5 (60-127)||(40976461-40976528)
chr5 (57-102)||(1309756-1309801)
chr5 (42-107)||(32273615-32273680)
[»] scaffold1114 (1 HSPs)
scaffold1114 (23-139)||(2347-2463)
[»] chr4 (35 HSPs)
chr4 (38-130)||(39193295-39193387)
chr4 (23-139)||(45064223-45064338)
chr4 (36-139)||(40047021-40047124)
chr4 (23-137)||(40757780-40757895)
chr4 (36-118)||(22424989-22425071)
chr4 (45-128)||(37247188-37247271)
chr4 (36-127)||(51997261-51997352)
chr4 (35-120)||(45047091-45047177)
chr4 (44-137)||(36219126-36219219)
chr4 (42-139)||(6076663-6076760)
chr4 (57-139)||(6077906-6077986)
chr4 (60-127)||(51676888-51676955)
chr4 (35-121)||(2062414-2062500)
chr4 (36-135)||(2128988-2129079)
chr4 (51-120)||(25479779-25479848)
chr4 (36-137)||(26417240-26417340)
chr4 (42-107)||(38298615-38298680)
chr4 (60-121)||(40946184-40946245)
chr4 (42-138)||(30599794-30599890)
chr4 (46-120)||(8757459-8757532)
chr4 (41-83)||(23928191-23928233)
chr4 (86-139)||(32212712-32212765)
chr4 (70-139)||(46061417-46061486)
chr4 (60-120)||(29627922-29627982)
chr4 (36-103)||(5834236-5834302)
chr4 (36-139)||(34483499-34483600)
chr4 (42-120)||(3161720-3161798)
chr4 (46-120)||(55970247-55970321)
chr4 (66-127)||(258265-258326)
chr4 (38-95)||(1586496-1586553)
chr4 (42-102)||(37274761-37274822)
chr4 (40-104)||(51175605-51175669)
chr4 (35-92)||(53455060-53455117)
chr4 (40-80)||(31767788-31767828)
chr4 (61-93)||(32212184-32212216)
[»] chr2 (18 HSPs)
chr2 (36-126)||(11915994-11916084)
chr2 (36-138)||(11511892-11511994)
chr2 (36-107)||(449043-449114)
chr2 (36-139)||(4062546-4062649)
chr2 (61-139)||(20683394-20683472)
chr2 (51-121)||(39445919-39445989)
chr2 (51-126)||(7772781-7772856)
chr2 (60-120)||(448806-448866)
chr2 (60-135)||(27974419-27974494)
chr2 (60-135)||(28060948-28061023)
chr2 (42-139)||(5552335-5552433)
chr2 (42-99)||(4634045-4634102)
chr2 (36-120)||(43302355-43302442)
chr2 (61-109)||(9973817-9973865)
chr2 (61-121)||(37848003-37848063)
chr2 (49-120)||(9043046-9043117)
chr2 (46-138)||(9707256-9707349)
chr2 (42-83)||(34375152-34375193)
[»] chr3 (22 HSPs)
chr3 (38-139)||(52669755-52669857)
chr3 (23-139)||(22909419-22909535)
chr3 (23-127)||(48457973-48458077)
chr3 (36-139)||(4489505-4489608)
chr3 (36-120)||(29178549-29178634)
chr3 (62-119)||(45707704-45707761)
chr3 (51-120)||(52119970-52120039)
chr3 (44-123)||(50596166-50596245)
chr3 (60-138)||(47968101-47968179)
chr3 (42-119)||(28963741-28963818)
chr3 (44-113)||(40485072-40485141)
chr3 (60-139)||(38138224-38138303)
chr3 (36-127)||(53143601-53143691)
chr3 (36-120)||(7886022-7886109)
chr3 (35-120)||(21079980-21080064)
chr3 (23-95)||(14464987-14465059)
chr3 (91-139)||(14476899-14476947)
chr3 (42-108)||(42004339-42004405)
chr3 (63-120)||(25926390-25926447)
chr3 (62-95)||(47180680-47180713)
chr3 (79-127)||(39095858-39095906)
chr3 (79-127)||(39096037-39096085)
[»] scaffold0110 (1 HSPs)
scaffold0110 (60-139)||(26734-26813)
[»] scaffold0578 (1 HSPs)
scaffold0578 (23-138)||(9928-10043)
[»] scaffold0067 (1 HSPs)
scaffold0067 (57-121)||(328-395)
[»] scaffold0092 (1 HSPs)
scaffold0092 (46-120)||(4799-4873)
[»] scaffold0154 (1 HSPs)
scaffold0154 (46-139)||(26992-27085)


Alignment Details
Target: chr1 (Bit Score: 88; Significance: 2e-42; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 36 - 139
Target Start/End: Complemental strand, 31636615 - 31636512
Alignment:
Q  36 acattgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaattgagtcc 135  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||| ||||    
T  31636615 acattgacacatcactttttaataattttttaataatagtacctaataggtactcaaccactccaatggagaccctctaacaaaaagtctaattgggtcc 31636516  T
Q  136 cacc 139  Q
    ||||    
T  31636515 cacc 31636512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 36 - 136
Target Start/End: Complemental strand, 4448114 - 4448013
Alignment:
Q  36 acattgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaa-caaaagatctaattgagtc 134  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||| |||    
T  4448114 acattgacacatcagtttttaatatttttttaataatagtacctaataggtactcaaccactccaatggagaccctctaaccaaaaggtctaattgggtc 4448015  T
Q  135 cc 136  Q
    ||    
T  4448014 cc 4448013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 36 - 120
Target Start/End: Complemental strand, 14884752 - 14884668
Alignment:
Q  36 acattgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaa 120  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||    
T  14884752 acattgacacatcactttttaataattttttaataatagtacctaataggtactcaaccactccaatgaagaccctttaacaaaa 14884668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 39 - 139
Target Start/End: Complemental strand, 50270878 - 50270778
Alignment:
Q  39 ttgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaattgagtcccac 138  Q
    |||||||||||||||||||||||||||||| |||||||||||||| | ||||||| |||||||| |||||||||||||||||| |||||||| |||||||    
T  50270878 ttgacacatcactttttaataattttttaacaatagtacctaataggcactcaactactccaatagagaccctctaacaaaaggtctaattgggtcccac 50270779  T
Q  139 c 139  Q
    |    
T  50270778 c 50270778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 23 - 137
Target Start/End: Original strand, 44573835 - 44573949
Alignment:
Q  23 ttaaatgtgtcatacattgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaaga 122  Q
    ||||||| |||  ||||| |||||| | ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||     
T  44573835 ttaaatgggtctcacatttacacattattttttaataattttttaataatagtacctaataggtactcaaccactccaatggagatcctctaacaaaagg 44573934  T
Q  123 tctaattgagtccca 137  Q
    | |||||| ||||||    
T  44573935 tttaattgggtccca 44573949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 44 - 126
Target Start/End: Original strand, 15457023 - 15457105
Alignment:
Q  44 acatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatcta 126  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||    
T  15457023 acatcacttttttataattttttaataatagtacctaatatgtactcaaccactccaatggacaccctccaacaaaaggtcta 15457105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 41 - 138
Target Start/End: Complemental strand, 5300555 - 5300458
Alignment:
Q  41 gacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaattgagtcccac 138  Q
    ||||||||||||||||||| ||||||||||||||||| ||||| ||||||||| ||||||||| ||| ||||||||||||| |||||| | |||||||    
T  5300555 gacacatcactttttaatatttttttaataatagtacttaataggtactcaactactccaatgaagatcctctaacaaaaggtctaatagggtcccac 5300458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 23 - 139
Target Start/End: Complemental strand, 23625266 - 23625149
Alignment:
Q  23 ttaaatgtgtcatacattgacacatcacttttt-aataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaag 121  Q
    ||||||| |||  |||||||||||| ||||||| |||||| ||||||||||||||| ||| | |||||||||||||||||| ||||||||||||||||||    
T  23625266 ttaaatgggtcccacattgacacataacttttttaataatattttaataatagtacttaacaggtactcaaccactccaatagagaccctctaacaaaag 23625167  T
Q  122 atctaattgagtcccacc 139  Q
     ||||||||  |||||||    
T  23625166 gtctaattggatcccacc 23625149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 60 - 139
Target Start/End: Original strand, 14395977 - 14396056
Alignment:
Q  60 attttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaattgagtcccacc 139  Q
    |||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||| | ||||||||| |||||    
T  14395977 attttttaataatagtacctaataggtacttaaccactccaatagagaccctctaacaaaaggtttaattgagttccacc 14396056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 36 - 138
Target Start/End: Original strand, 38865351 - 38865453
Alignment:
Q  36 acattgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaattgagtcc 135  Q
    |||| ||||||| | |||||||||||| |||||||||||||| ||||| ||||| |||||||||||| |||| ||||||||||||| |||||| | ||||    
T  38865351 acatggacacattattttttaataattctttaataatagtacttaataggtacttaaccactccaattgagatcctctaacaaaaggtctaatagggtcc 38865450  T
Q  136 cac 138  Q
    |||    
T  38865451 cac 38865453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 19513010 - 19512895
Alignment:
Q  23 ttaaatgtgtcatacattgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaaga 122  Q
    ||||||| |||  |||| |||| |||| ||||||||||||||||||||||| ||| ||||| ||||||||||||||||||| ||| ||| ||||||||      
T  19513010 ttaaatgggtcgcacatggacatatcattttttaataattttttaataataatacttaataggtactcaaccactccaatgaagatcctttaacaaaaat 19512911  T
Q  123 tctaattgagtcccac 138  Q
    | |||| |||||||||    
T  19512910 tttaatagagtcccac 19512895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 44 - 139
Target Start/End: Original strand, 42483687 - 42483782
Alignment:
Q  44 acatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaattgagtcccacc 139  Q
    |||||||| ||| ||||||||||||||| |||| |||||| | |||||| || |||||||||||||||||||||||| |||||| || ||||||||    
T  42483687 acatcactattttataattttttaataacagtatctaataagcactcaatcattccaatggagaccctctaacaaaatatctaactgggtcccacc 42483782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 42 - 120
Target Start/End: Complemental strand, 32914003 - 32913925
Alignment:
Q  42 acacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaa 120  Q
    |||||||| ||||| |||||||||||||||||||| |||||| |||||||| ||||||||| |||| ||||||||||||    
T  32914003 acacatcatttttttataattttttaataatagtatctaataggtactcaatcactccaatagagaacctctaacaaaa 32913925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 42 - 127
Target Start/End: Complemental strand, 42401145 - 42401060
Alignment:
Q  42 acacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaa 127  Q
    |||||||||| ||| ||||||||||||||| ||||||||||| | |||||  |||||||||||||||||||| ||||||| |||||    
T  42401145 acacatcactcttttataattttttaataacagtacctaataagcactcagtcactccaatggagaccctctgacaaaaggtctaa 42401060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 35 - 139
Target Start/End: Complemental strand, 44416042 - 44415939
Alignment:
Q  35 tacattgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaattgagtc 134  Q
    |||||||||||||||||||||||| |||||| |||||||||  |||||   |||| ||||||||||| | ||||||||||||||||  |||||||| |||    
T  44416042 tacattgacacatcactttttaatcattttt-aataatagtgtctaatggatactaaaccactccaacgaagaccctctaacaaaatgtctaattgggtc 44415944  T
Q  135 ccacc 139  Q
    |||||    
T  44415943 ccacc 44415939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 94
Target Start/End: Complemental strand, 23740234 - 23740163
Alignment:
Q  23 ttaaatgtgtcatacattgacacatcactttttaataattttttaataatagtacctaatatgtactcaacc 94  Q
    ||||||| |||  |||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||    
T  23740234 ttaaatgggtcccacattgacacatcactttttaataattttttaataataatacctaacaggtactcaacc 23740163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 139
Target Start/End: Original strand, 35615452 - 35615550
Alignment:
Q  40 tgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaattgagtcccacc 139  Q
    |||||||||| |||||| || ||||||||||||||||||||||| ||||||||||||| ||||| ||||||| ||| ||||  ||||| || ||||||||    
T  35615452 tgacacatcattttttatta-ttttttaataatagtacctaataagtactcaaccacttcaatgaagaccctttaataaaatgtctaaatgggtcccacc 35615550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 44 - 138
Target Start/End: Original strand, 45467642 - 45467736
Alignment:
Q  44 acatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaattgagtcccac 138  Q
    |||||| ||||||||||||||||||||||||||  ||||| ||| ||||||||| |||| |||| ||||||||||||  |||||| | |||||||    
T  45467642 acatcattttttaataattttttaataatagtatttaataggtattcaaccacttcaatagagatcctctaacaaaatgtctaatagggtcccac 45467736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 36 - 113
Target Start/End: Original strand, 31206308 - 31206384
Alignment:
Q  36 acattgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctct 113  Q
    |||| ||||||||||||||| |||||||| ||||||||||| ||||||  ||||||||||||||||| ||||||||||    
T  31206308 acatagacacatcacttttttataatttt-taataatagtatctaataaatactcaaccactccaatagagaccctct 31206384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 31 - 103
Target Start/End: Complemental strand, 1775054 - 1774982
Alignment:
Q  31 gtcatacattgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatg 103  Q
    |||| |||| || |||||||||||| || ||||||||||||||||| |||||| |||||||||||||||||||    
T  1775054 gtcacacatggaaacatcacttttttattattttttaataatagtatctaataggtactcaaccactccaatg 1774982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 42 - 138
Target Start/End: Original strand, 44240415 - 44240511
Alignment:
Q  42 acacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaattgagtcccac 138  Q
    |||||||||||||| || |||||||||||||||||  ||||| ||||||||| ||| ||||||||| |||||| |||||  | ||| ||||||||||    
T  44240415 acacatcacttttttattattttttaataatagtatttaataggtactcaactacttcaatggagatcctctatcaaaatgtataaatgagtcccac 44240511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 127
Target Start/End: Complemental strand, 5827684 - 5827593
Alignment:
Q  36 acattgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaa 127  Q
    |||| ||||||||||||||| || |||||||| |||| |||| ||||| ||||| ||||||||||||||||| || ||| |||||| |||||    
T  5827684 acatggacacatcacttttttattattttttagtaatggtacttaataggtactgaaccactccaatggagatcccctatcaaaaggtctaa 5827593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 60 - 121
Target Start/End: Complemental strand, 3582830 - 3582769
Alignment:
Q  60 attttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaag 121  Q
    ||||||||||||||||| |||||| ||||||||||||||||||| ||| |||||| ||||||    
T  3582830 attttttaataatagtatctaataggtactcaaccactccaatgtagatcctctatcaaaag 3582769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 103
Target Start/End: Original strand, 6704145 - 6704224
Alignment:
Q  23 ttaaatgtgtcatacattgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatg 103  Q
    ||||||| |||  |||| ||||| |||||||||||||||||| |||||||||||  ||||| |||||||||||||||||||    
T  6704145 ttaaatgggtctcacatggacacgtcactttttaataatttt-taataatagtatttaataggtactcaaccactccaatg 6704224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 41 - 120
Target Start/End: Complemental strand, 7789857 - 7789778
Alignment:
Q  41 gacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaa 120  Q
    |||||||| |||||| ||||||||||||||||||||  ||||| | |||||| ||||||||| |||| ||| ||||||||    
T  7789857 gacacatcgcttttttataattttttaataatagtatttaataggcactcaatcactccaatagagaacctttaacaaaa 7789778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 139
Target Start/End: Original strand, 33259432 - 33259511
Alignment:
Q  60 attttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaattgagtcccacc 139  Q
    |||||||||||||||||| ||||| |||||||| ||||||||| || ||||| ||||||||| | ||| |||| ||||||    
T  33259432 attttttaataatagtacataataggtactcaatcactccaatagaaaccctgtaacaaaaggtttaaatgagacccacc 33259511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 139
Target Start/End: Original strand, 33279591 - 33279670
Alignment:
Q  60 attttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaattgagtcccacc 139  Q
    |||||||||||||||||| ||||| |||||||| ||||||||| || ||||| ||||||||| | ||| |||| ||||||    
T  33279591 attttttaataatagtacataataggtactcaatcactccaatagaaaccctgtaacaaaaggtttaaatgagacccacc 33279670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 61 - 119
Target Start/End: Complemental strand, 42489117 - 42489059
Alignment:
Q  61 ttttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaa 119  Q
    ||||||||||||||||||||||| |||||| ||||||||||| |||| |||||| ||||    
T  42489117 ttttttaataatagtacctaataggtactcgaccactccaatagagatcctctatcaaa 42489059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 120
Target Start/End: Original strand, 5040953 - 5041016
Alignment:
Q  57 ataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaa 120  Q
    ||||||||| ||||||||||||||||| |||||||| ||||| ||| |||| ||| ||||||||    
T  5040953 ataatttttcaataatagtacctaataggtactcaatcactctaatagagagcctgtaacaaaa 5041016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 43177815 - 43177886
Alignment:
Q  36 acattgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggaga 107  Q
    |||| |||| |||||||||| || ||||||||||||||| | |||||| ||||| |||||||||||| ||||    
T  43177815 acatggacagatcacttttttattattttttaataatagcatctaataggtactaaaccactccaatagaga 43177886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 134
Target Start/End: Complemental strand, 31827286 - 31827205
Alignment:
Q  53 tttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaattgagtc 134  Q
    |||| |||||||||||||| ||||||||||| | |||  | |||| |||||||||| |||||||||||  ||||| ||||||    
T  31827286 tttattaattttttaataacagtacctaataagcactagatcacttcaatggagacactctaacaaaatgtctaaatgagtc 31827205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 120
Target Start/End: Original strand, 51244074 - 51244143
Alignment:
Q  51 tttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaa 120  Q
    ||||| || |||||||||||||||||||||||| ||||||||| | |||||| |||| | |||| |||||    
T  51244074 ttttttattattttttaataatagtacctaataggtactcaactattccaatcgagatcatctatcaaaa 51244143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 102
Target Start/End: Original strand, 33726878 - 33726938
Alignment:
Q  42 acacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaat 102  Q
    |||||||||||||| || |||||||||||| |||| |||||| |||||||  |||||||||    
T  33726878 acacatcacttttttattattttttaataacagtatctaataggtactcattcactccaat 33726938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 127
Target Start/End: Original strand, 33780530 - 33780615
Alignment:
Q  42 acacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaa 127  Q
    |||||||||  ||| ||||||||||||||| ||||  ||||| | |||||| |||| ||||||| | ||||| ||||||| |||||    
T  33780530 acacatcacacttttataattttttaataacagtatataataagcactcaatcactacaatggaaatcctctcacaaaaggtctaa 33780615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 101
Target Start/End: Complemental strand, 23333890 - 23333846
Alignment:
Q  57 ataattttttaataatagtacctaatatgtactcaaccactccaa 101  Q
    ||||||||||||||||||||| ||||| | |||||| ||||||||    
T  23333890 ataattttttaataatagtacttaataagcactcaatcactccaa 23333846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 127
Target Start/End: Original strand, 30335687 - 30335776
Alignment:
Q  36 acattgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaa 127  Q
    |||||||||||||| |||||  |  |||||||| || |||| |||||| ||| ||||||||| ||||| | ||||||||| ||||| |||||    
T  30335687 acattgacacatcatttttt--tttttttttaacaacagtatctaataggtattcaaccacttcaatgaaaaccctctaataaaaggtctaa 30335776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 85; Significance: 1e-40; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 36 - 136
Target Start/End: Complemental strand, 378716 - 378616
Alignment:
Q  36 acattgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaattgagtcc 135  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  378716 acattgacacttcactttttaataattttttaataatagtacctaataggtactaaaccactccaatggagaccctctaacaaaaggtctaattgagtcc 378617  T
Q  136 c 136  Q
    |    
T  378616 c 378616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 23 - 139
Target Start/End: Original strand, 6793862 - 6793978
Alignment:
Q  23 ttaaatgtgtcatacattgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaaga 122  Q
    |||||||||||  ||||||| |||| | ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||     
T  6793862 ttaaatgtgtcccacattgatacattattttttaatacttttttaataatagtacctaataggtactcaaccactccaatggaaaccctctaacaaaagg 6793961  T
Q  123 tctaattgagtcccacc 139  Q
    |||||||| ||||||||    
T  6793962 tctaattgggtcccacc 6793978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 36 - 139
Target Start/End: Original strand, 11703143 - 11703246
Alignment:
Q  36 acattgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaattgagtcc 135  Q
    |||||||||| |||| |||| ||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||| ||||| |||| ||    
T  11703143 acattgacacgtcacctttttataattttttaatgatagtacctaataggtactcaaccactccaatagagaccctctaacaaaaggtctaaatgagacc 11703242  T
Q  136 cacc 139  Q
    ||||    
T  11703243 cacc 11703246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 130
Target Start/End: Original strand, 29383422 - 29383501
Alignment:
Q  51 tttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaattg 130  Q
    ||||||| ||||||||||||||| ||| ||||| |||||||| |||||||| ||||| ||||||||||||| ||||||||    
T  29383422 tttttaacaattttttaataataatacttaataggtactcaatcactccaacggagatcctctaacaaaaggtctaattg 29383501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 41 - 120
Target Start/End: Complemental strand, 30250463 - 30250384
Alignment:
Q  41 gacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaa 120  Q
    ||||||||||||||||||||||||||||||||| ||  ||||| ||| ||||| |||||||| |||| ||||||| ||||    
T  30250463 gacacatcactttttaataattttttaataatactatttaataggtaatcaacaactccaatagagatcctctaagaaaa 30250384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 139
Target Start/End: Original strand, 4405691 - 4405768
Alignment:
Q  62 tttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaattgagtcccacc 139  Q
    |||||||||| ||||||||| |  |||||||||||||||||||||| |||| | |||||  ||||| || ||||||||    
T  4405691 tttttaataagagtacctaacagctactcaaccactccaatggagatcctccatcaaaatgtctaaatgggtcccacc 4405768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 101
Target Start/End: Original strand, 7693901 - 7693960
Alignment:
Q  42 acacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaa 101  Q
    ||||||||||  || ||||||||||| ||||||||||||||| |||||||| | ||||||    
T  7693901 acacatcactcatttataattttttagtaatagtacctaataagtactcaatccctccaa 7693960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 89
Target Start/End: Complemental strand, 24150176 - 24150122
Alignment:
Q  35 tacattgacacatcactttttaataattttttaataatagtacctaatatgtact 89  Q
    ||||||||||| ||||||||| ||| ||||||||| ||||||| ||||| |||||    
T  24150176 tacattgacacgtcacttttttatagttttttaatgatagtacttaataggtact 24150122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 80
Target Start/End: Original strand, 17095969 - 17096009
Alignment:
Q  40 tgacacatcactttttaataattttttaataatagtaccta 80  Q
    ||||||||||||| || ||||||||||||||| ||||||||    
T  17095969 tgacacatcacttatttataattttttaataaaagtaccta 17096009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 90
Target Start/End: Original strand, 32025620 - 32025664
Alignment:
Q  46 atcactttttaataattttttaataatagtacctaatatgtactc 90  Q
    |||||||||| || ||||| |||||||||||||||||| ||||||    
T  32025620 atcacttttttattattttataataatagtacctaataggtactc 32025664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 84; Significance: 5e-40; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 36 - 139
Target Start/End: Original strand, 38901203 - 38901305
Alignment:
Q  36 acattgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaattgagtcc 135  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||| ||||    
T  38901203 acattgacacatcactttttaataattttttaataatagtacctaataggtactcaaccactccaatggagaccctctaaaaaaag-tctaattgggtcc 38901301  T
Q  136 cacc 139  Q
    ||||    
T  38901302 cacc 38901305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 37 - 139
Target Start/End: Complemental strand, 17793415 - 17793313
Alignment:
Q  37 cattgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaattgagtccc 136  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||| ||||| | |||||| |||||    
T  17793415 cattgacacatcactttttaataattttttaataatagtacctaataggtactcaaccactcaaatggagaccctttaagaaaaggtttaattgggtccc 17793316  T
Q  137 acc 139  Q
    |||    
T  17793315 acc 17793313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 23 - 138
Target Start/End: Original strand, 14728877 - 14728992
Alignment:
Q  23 ttaaatgtgtcatacattgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaaga 122  Q
    ||||||| |||  |||| ||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||||| |||| |||||||||||||     
T  14728877 ttaaatgggtctcacatggacacatcactttttaataattttttaataataatacttaataggtactcaaccactccaatagagatcctctaacaaaagg 14728976  T
Q  123 tctaattgagtcccac 138  Q
    |||||| | |||||||    
T  14728977 tctaatagggtcccac 14728992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 46 - 138
Target Start/End: Original strand, 7176678 - 7176770
Alignment:
Q  46 atcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaattgagtcccac 138  Q
    |||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| | ||||||||||| |||||| | |||||||    
T  7176678 atcattttttaataattttttaataatagtacttaataggtactcaaccactccaatggagatcttctaacaaaaggtctaatagggtcccac 7176770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 44 - 138
Target Start/End: Original strand, 26705754 - 26705848
Alignment:
Q  44 acatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaattgagtcccac 138  Q
    |||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| |||| ||||||  ||||| ||||| ||||| ||||    
T  26705754 acatcacttttttattattttttaataatagtacctaataggtactcaaccactccaatagagatcctctattaaaaggtctaaatgagttccac 26705848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 35 - 121
Target Start/End: Original strand, 30905530 - 30905616
Alignment:
Q  35 tacattgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaag 121  Q
    ||||| ||||||| ||||||| ||||||||||||||||||||||||||| ||| ||||| ||| |||| ||||||||| ||||||||    
T  30905530 tacatggacacataacttttttataattttttaataatagtacctaataggtattcaacaactacaatagagaccctcaaacaaaag 30905616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 51 - 139
Target Start/End: Complemental strand, 32953292 - 32953204
Alignment:
Q  51 tttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaattgagtcccacc 139  Q
    |||||| || |||||| |||||||||||||||| |||| |||||||||||||||||| |||||| |||||  ||||| |||||||||||    
T  32953292 tttttattattttttttataatagtacctaataggtacccaaccactccaatggagatcctctatcaaaatgtctaaatgagtcccacc 32953204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 60 - 127
Target Start/End: Complemental strand, 10288158 - 10288091
Alignment:
Q  60 attttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaa 127  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||| |||||| |||||| |||||    
T  10288158 attttttaataatagtacctaataggtactcaaccactccaatgaagatcctctatcaaaaggtctaa 10288091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 61 - 139
Target Start/End: Complemental strand, 41123397 - 41123319
Alignment:
Q  61 ttttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaattgagtcccacc 139  Q
    ||||||||||||| || |||||| ||||||||||||||||||||||| | |||| |||||| ||||| |||||||||||    
T  41123397 ttttttaataatactatctaataggtactcaaccactccaatggagatcatctatcaaaaggtctaaatgagtcccacc 41123319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 44 - 123
Target Start/End: Original strand, 7573076 - 7573155
Alignment:
Q  44 acatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagat 123  Q
    |||||||||||| || |||||||||||||||||  ||||| ||||||||||||| ||||||||| | |||| ||||||||    
T  7573076 acatcacttttttattattttttaataatagtatttaataggtactcaaccactacaatggagatcatctatcaaaagat 7573155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 138
Target Start/End: Complemental strand, 29416761 - 29416658
Alignment:
Q  35 tacattgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaattgagtc 134  Q
    ||||| ||||||||| || || || |||||||||||||||||||||||| ||| |||||||||| |||||||| | |||| |||||  ||||| || |||    
T  29416761 tacatagacacatcatttctttattattttttaataatagtacctaataggtaatcaaccactctaatggagatcttctatcaaaatgtctaaatgtgtc 29416662  T
Q  135 ccac 138  Q
    ||||    
T  29416661 ccac 29416658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 37187661 - 37187590
Alignment:
Q  36 acattgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggaga 107  Q
    ||||||||| || |||||||||| ||||||||||||||||| |||||| ||||||||||||| |||| ||||    
T  37187661 acattgacatattactttttaattattttttaataatagtatctaataggtactcaaccacttcaattgaga 37187590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 121
Target Start/End: Complemental strand, 24849059 - 24848970
Alignment:
Q  36 acattgacacatcactttttaataatttttt----aataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaag 121  Q
    |||| ||||||||||||||| || |||||||    ||||||| ||| ||||| |||||||||||||| | ||||||||||||||||||||    
T  24849059 acatggacacatcacttttttattatttttttaataataataatacataataggtactcaaccactctattggagaccctctaacaaaag 24848970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 57 - 104
Target Start/End: Complemental strand, 44104267 - 44104220
Alignment:
Q  57 ataattttttaataatagtacctaatatgtactcaaccactccaatgg 104  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||    
T  44104267 ataattttttaataatagtacctaatatgtacccaaccattccaatgg 44104220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 127
Target Start/End: Complemental strand, 18807135 - 18807044
Alignment:
Q  36 acattgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaa 127  Q
    |||| ||||| ||||||||| || ||||||||||||||||| | || |  ||||||||||||||||| ||||  ||||| |||||| |||||    
T  18807135 acatggacacttcacttttttattattttttaataatagtatccaacagatactcaaccactccaatagagattctctatcaaaaggtctaa 18807044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 101
Target Start/End: Original strand, 31226448 - 31226507
Alignment:
Q  42 acacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaa 101  Q
    ||||||||||  || |||||||||||||| ||||||||||||  ||||||| ||||||||    
T  31226448 acacatcactcatttataattttttaatagtagtacctaataaatactcaaacactccaa 31226507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 120
Target Start/End: Complemental strand, 7207121 - 7207043
Alignment:
Q  42 acacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaa 120  Q
    |||||||||||||| || ||||| |||||| ||||| ||||| |||| ||  ||||||||| |||| | ||||||||||    
T  7207121 acacatcacttttttattattttataataacagtacttaataggtacccagtcactccaatagagatcttctaacaaaa 7207043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Original strand, 14581174 - 14581212
Alignment:
Q  23 ttaaatgtgtcatacattgacacatcactttttaataat 61  Q
    ||||||| ||| |||||||||||||||||||||||||||    
T  14581174 ttaaatgggtcttacattgacacatcactttttaataat 14581212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 28557398 - 28557342
Alignment:
Q  36 acattgacacatcactttttaataattttttaataatagtacctaatatgtactcaa 92  Q
    |||| |||||||||||  || |||||||||||||| ||||||||||||  |||||||    
T  28557398 acatggacacatcactaatttataattttttaatagtagtacctaataactactcaa 28557342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 81; Significance: 3e-38; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 39 - 139
Target Start/End: Original strand, 41003344 - 41003444
Alignment:
Q  39 ttgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaattgagtcccac 138  Q
    |||||||||||||||||||||||||||||| |||||||  ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  41003344 ttgacacatcactttttaataattttttaacaatagtaattaataggtacccaaccactccaatggagaccctctaacaaaagatctaattgagtcccac 41003443  T
Q  139 c 139  Q
    |    
T  41003444 c 41003444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 41 - 137
Target Start/End: Original strand, 10249013 - 10249110
Alignment:
Q  41 gacacatcactttttaataattttttaataatagtacctaatatg-tactcaaccactccaatggagaccctctaacaaaagatctaattgagtccca 137  Q
    ||||||||||||||||||||||||||||||||| ||| ||||| | |||||||||||||||||||||| ||||||||||||| |||||| | ||||||    
T  10249013 gacacatcactttttaataattttttaataataatacttaatagggtactcaaccactccaatggagatcctctaacaaaaggtctaatagggtccca 10249110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 36 - 121
Target Start/End: Complemental strand, 30224838 - 30224753
Alignment:
Q  36 acattgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaag 121  Q
    |||| ||||||||||||||| || |||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||    
T  30224838 acatggacacatcacttttttattattttttaataatagtacctaataggtactcaaccactctaatggagactctctaacaaaag 30224753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 41 - 139
Target Start/End: Original strand, 957986 - 958084
Alignment:
Q  41 gacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaattgagtcccacc 139  Q
    ||||||||||||||| || |||||||||||||||||||||||| ||||| ||||||||||||| ||| |||||| |||||| ||||| |||||| ||||    
T  957986 gacacatcacttttttattattttttaataatagtacctaataggtacttaaccactccaatgaagatcctctatcaaaaggtctaaatgagtctcacc 958084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 40 - 130
Target Start/End: Complemental strand, 33987899 - 33987809
Alignment:
Q  40 tgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaattg 130  Q
    |||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||| ||||| | ||||||||||||||  ||||||||    
T  33987899 tgacacatcactttttaataattttttaataatagtatttaataggtactcaaccacttcaatgaataccctctaacaaaatgtctaattg 33987809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 44 - 138
Target Start/End: Original strand, 46208996 - 46209090
Alignment:
Q  44 acatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaattgagtcccac 138  Q
    |||||||||||||||||||||||||||||| ||  ||||| |||| |||||||||||||||||| ||||||||||||| |||||| | |||||||    
T  46208996 acatcactttttaataattttttaataataatatttaataggtacccaaccactccaatggagatcctctaacaaaaggtctaatagggtcccac 46209090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 38 - 129
Target Start/End: Complemental strand, 27816595 - 27816504
Alignment:
Q  38 attgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaatt 129  Q
    |||||||||||| | ||||||||||||| |||||||||| |||||| ||||| || |||||||||||||||||||||||||||  |||||||    
T  27816595 attgacacatcattctttaataatttttaaataatagtatctaataggtactaaatcactccaatggagaccctctaacaaaatgtctaatt 27816504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 132
Target Start/End: Original strand, 42710459 - 42710555
Alignment:
Q  36 acattgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaattgag 132  Q
    |||||||||||| ||||||| ||||||||||||||||||||  ||||| ||| |||| |||| |||| |||||||||||||||||| ||||| ||||    
T  42710459 acattgacacattacttttttataattttttaataatagtatttaataggtattcaatcacttcaatagagaccctctaacaaaaggtctaaatgag 42710555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 38 - 127
Target Start/End: Original strand, 5532734 - 5532824
Alignment:
Q  38 attgacacatcactttttaataatttt-ttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaa 127  Q
    |||||||||||||||||| || ||||| |||||||||||| |||||| ||||||||||||| ||||||||| |||| |||||||| |||||    
T  5532734 attgacacatcacttttttattatttttttaataatagtatctaataggtactcaaccactacaatggagatcctccaacaaaaggtctaa 5532824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 120
Target Start/End: Complemental strand, 33882202 - 33882117
Alignment:
Q  36 acattgacacatcacttttta-ataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaa 120  Q
    |||| |||||||||||||||  || |||||||||||||||||||||||| ||||||||||||| ||||||||| |||||| |||||    
T  33882202 acatggacacatcactttttttattattttttaataatagtacctaataggtactcaaccacttcaatggagatcctctatcaaaa 33882117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 105
Target Start/End: Complemental strand, 9153847 - 9153768
Alignment:
Q  23 ttaaatgtgtcatacattgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatgga 105  Q
    |||||||||||  |||| |||||||||||||||||||||||||||||||||||||    || |||||||||||||||||||||    
T  9153847 ttaaatgtgtcccacatggacacatcactttttaataattttttaataatagtac---ttaggtactcaaccactccaatgga 9153768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 36 - 127
Target Start/End: Original strand, 25795794 - 25795886
Alignment:
Q  36 acattgacacatcactttttaataatttttt-aataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaa 127  Q
    |||||||||| | | ||||| |||||||||| ||| ||||||||||||| |||||||||||||||||| |||| ||||||||||||| |||||    
T  25795794 acattgacacgttattttttcataatttttttaatgatagtacctaataggtactcaaccactccaatagagatcctctaacaaaaggtctaa 25795886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 123
Target Start/End: Original strand, 17603788 - 17603875
Alignment:
Q  36 acattgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagat 123  Q
    |||||||||| ||| ||||| ||||||||||||| |||||  |||||| |||||||||||||||||| || |||||||| ||||||||    
T  17603788 acattgacacgtcatttttttataattttttaatgatagtgactaataggtactcaaccactccaatagataccctctagcaaaagat 17603875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 44 - 107
Target Start/End: Complemental strand, 34968053 - 34967990
Alignment:
Q  44 acatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggaga 107  Q
    |||||||||||| || |||||||||||||||||||||||||||| |||  ||||||||||||||    
T  34968053 acatcacttttttattattttttaataatagtacctaatatgtattcattcactccaatggaga 34967990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 139
Target Start/End: Original strand, 44483962 - 44484064
Alignment:
Q  36 acattgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaattgagtcc 135  Q
    |||| ||||||||| ||||| || ||||||||||||||||| |||||| |||| ||||||||| |||||||| ||||||  ||||  ||||| |||||||    
T  44483962 acatggacacatcatttttttattattttttaataatagtatctaatacgtac-caaccactcgaatggagatcctctatgaaaatgtctaaatgagtcc 44484060  T
Q  136 cacc 139  Q
    ||||    
T  44484061 cacc 44484064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 38 - 120
Target Start/End: Complemental strand, 36655833 - 36655751
Alignment:
Q  38 attgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaa 120  Q
    |||||||||||| |||||||| ||||||||||||||||||||||   |||||||||||||  || ||||| |||| |||||||    
T  36655833 attgacacatcattttttaattattttttaataatagtacctaactggtactcaaccactaaaacggagatcctccaacaaaa 36655751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 139
Target Start/End: Complemental strand, 22074383 - 22074306
Alignment:
Q  62 tttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaattgagtcccacc 139  Q
    |||||||||||||||| |||||  |||||||||||||||||||| ||||| ||||||||| ||||  || ||||||||    
T  22074383 tttttaataatagtacataatagatactcaaccactccaatggaaaccctataacaaaaggtctatatgggtcccacc 22074306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 112
Target Start/End: Complemental strand, 37504008 - 37503956
Alignment:
Q  60 attttttaataatagtacctaatatgtactcaaccactccaatggagaccctc 112  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||| ||||    
T  37504008 attttttaataatagtatctaataggtactcaaccactccaatggagatcctc 37503956  T

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Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 44 - 123
Target Start/End: Complemental strand, 23307914 - 23307835
Alignment:
Q  44 acatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagat 123  Q
    |||| ||||||| || ||||||||||| |||||| ||||| |||||||| ||||||||| |||| |||||| ||||||||    
T  23307914 acattacttttttattattttttaatattagtacataataggtactcaagcactccaatagagatcctctatcaaaagat 23307835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 101
Target Start/End: Original strand, 39837576 - 39837646
Alignment:
Q  31 gtcatacattgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaa 101  Q
    |||| |||| ||| ||||||||||| || | |||||||||||||||||||||| ||| |||||||||||||    
T  39837576 gtcacacatggacgcatcacttttttattactttttaataatagtacctaataggtattcaaccactccaa 39837646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 44237975 - 44238035
Alignment:
Q  36 acattgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccac 96  Q
    |||| ||||||||||||||| || |||||||||||||||||| ||||| ||||| ||||||    
T  44237975 acatagacacatcacttttttattattttttaataatagtacttaataagtactgaaccac 44238035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 83
Target Start/End: Complemental strand, 42988423 - 42988371
Alignment:
Q  31 gtcatacattgacacatcactttttaataattttttaataatagtacctaata 83  Q
    |||| |||||| ||||||||||||| || ||||||||||||||||| ||||||    
T  42988423 gtcacacattggcacatcacttttttattattttttaataatagtatctaata 42988371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 120
Target Start/End: Original strand, 9486812 - 9486871
Alignment:
Q  61 ttttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaa 120  Q
    ||||||||||| ||||||||||| |||||||| |||| ||||  ||||||| ||||||||    
T  9486812 ttttttaataacagtacctaataagtactcaatcactgcaataaagaccctataacaaaa 9486871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 104
Target Start/End: Complemental strand, 43788671 - 43788608
Alignment:
Q  41 gacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatgg 104  Q
    |||||||||||| || ||||||||||||||| |||||||| || | ||||||  ||||||||||    
T  43788671 gacacatcacttatttataattttttaataaaagtacctattaaggactcaatgactccaatgg 43788608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 92
Target Start/End: Original strand, 23801826 - 23801860
Alignment:
Q  58 taattttttaataatagtacctaatatgtactcaa 92  Q
    |||||||||||||||||||||||||| ||||||||    
T  23801826 taattttttaataatagtacctaataagtactcaa 23801860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 127
Target Start/End: Original strand, 31386888 - 31386946
Alignment:
Q  69 taatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaa 127  Q
    ||||||||||||||| ||| ||||||||||||||| ||| |||||| ||| || |||||    
T  31386888 taatagtacctaataggtattcaaccactccaatgaagatcctctatcaataggtctaa 31386946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 120
Target Start/End: Original strand, 33815907 - 33815985
Alignment:
Q  42 acacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaa 120  Q
    |||| ||||| ||||||||| ||||||||| |||| ||||||   |||||| |||| |||| |||| ||||||||||||    
T  33815907 acacgtcactctttaataatattttaataacagtatctaataaacactcaatcactacaatagagatcctctaacaaaa 33815985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 57 - 102
Target Start/End: Original strand, 43302112 - 43302157
Alignment:
Q  57 ataattttttaataatagtacctaatatgtactcaaccactccaat 102  Q
    |||||||||||||| ||||||||||||  ||||||| |||||||||    
T  43302112 ataattttttaatagtagtacctaataaatactcaatcactccaat 43302157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 104
Target Start/End: Complemental strand, 584213 - 584149
Alignment:
Q  40 tgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatgg 104  Q
    ||||||||||||| || ||||||||||||||| |||| ||| || | ||||||  ||||||||||    
T  584213 tgacacatcacttatttataattttttaataaaagtatctattaaggactcaatgactccaatgg 584149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 80; Significance: 1e-37; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 36 - 139
Target Start/End: Original strand, 33207470 - 33207572
Alignment:
Q  36 acattgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaattgagtcc 135  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  33207470 acattgacacatcactttttaataatttt-taataatagtacttaataggtactcaaccactccaatggagaccctctaacaaaaggtctaattgggtcc 33207568  T
Q  136 cacc 139  Q
    ||||    
T  33207569 cacc 33207572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 23 - 121
Target Start/End: Complemental strand, 37194413 - 37194315
Alignment:
Q  23 ttaaatgtgtcatacattgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaag 121  Q
    ||||||| |||  |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  37194413 ttaaatgggtctcacattgacacatcactttttaataattttttaataatagtacctaataggtactcaaccactccaatagagaccctctaacaaaag 37194315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 38 - 137
Target Start/End: Original strand, 4277372 - 4277471
Alignment:
Q  38 attgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaattgagtccca 137  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||| |||||||||||||||||| |||||||| ||||||    
T  4277372 attgacacatcactttttaataattttttaataatagtacctaataactactcaaccactcaaattgagaccctctaacaaaaggtctaattgggtccca 4277471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 38 - 139
Target Start/End: Original strand, 39324047 - 39324148
Alignment:
Q  38 attgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaattgagtccca 137  Q
    |||||||| | ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||| ||||||||  |||||    
T  39324047 attgacacgtaactttttaataattttttaataatagtacttaataggtactcaaccactccaatggagaccctataacaaaaggtctaattggatccca 39324146  T
Q  138 cc 139  Q
    ||    
T  39324147 cc 39324148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 36 - 138
Target Start/End: Original strand, 8433720 - 8433822
Alignment:
Q  36 acattgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaattgagtcc 135  Q
    |||| ||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||| ||||||||| ||||||||||||| |||||| | ||||    
T  8433720 acatggacacatcactttttaataattttttaataatagtgcttaataggtactcaaccacttcaatggagatcctctaacaaaaggtctaatagggtcc 8433819  T
Q  136 cac 138  Q
    |||    
T  8433820 cac 8433822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 36 - 127
Target Start/End: Complemental strand, 30471888 - 30471797
Alignment:
Q  36 acattgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaa 127  Q
    ||||||||| |||| ||||| ||||||||||||| ||||||||||||| |||||||||||||||||  ||||| |||||||||||| |||||    
T  30471888 acattgacaaatcatttttttataattttttaatgatagtacctaataggtactcaaccactccaacagagacgctctaacaaaaggtctaa 30471797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 36 - 127
Target Start/End: Original strand, 13417231 - 13417322
Alignment:
Q  36 acattgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaa 127  Q
    |||| ||||||||||||||| || ||||||||| |||||||||||||| |||||||||||||||||| |||| | |||| |||||| |||||    
T  13417231 acatggacacatcacttttttattattttttaacaatagtacctaataggtactcaaccactccaatagagatcatctatcaaaaggtctaa 13417322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 127
Target Start/End: Complemental strand, 5367856 - 5367762
Alignment:
Q  35 tacattgacacatcacttttta--ataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaa 127  Q
    |||||||||||||||||||||   ||||||||||||||||||||| ||||| ||| | |||||||||||| |||||  | |||||||||||||||    
T  5367856 tacattgacacatcacttttttttataattttttaataatagtacataataggtagttaaccactccaatagagactttttaacaaaagatctaa 5367762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 72 - 139
Target Start/End: Complemental strand, 7053648 - 7053581
Alignment:
Q  72 tagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaattgagtcccacc 139  Q
    |||||||| ||| ||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  7053648 tagtaccttataggtactgaaccacttcaatggagaccctctaacaaaaggtctaattgagtcccacc 7053581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 36 - 138
Target Start/End: Complemental strand, 25768307 - 25768205
Alignment:
Q  36 acattgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaattgagtcc 135  Q
    |||| ||||||||||||||| || |||||||||||||| ||||||||| |||||| || ||||||||| ||| |||||| |||||  ||||| || ||||    
T  25768307 acatagacacatcacttttttattattttttaataataatacctaataggtactcgactactccaatgaagatcctctatcaaaatgtctaaatgggtcc 25768208  T
Q  136 cac 138  Q
    |||    
T  25768207 cac 25768205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 36 - 120
Target Start/End: Complemental strand, 2552590 - 2552507
Alignment:
Q  36 acattgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaa 120  Q
    |||| ||||||||| | |||| ||||||||||||||||| ||||||||  |||||||||||| ||||||| ||||||||||||||    
T  2552590 acatagacacatcattcttta-taattttttaataatagcacctaatagatactcaaccactacaatggataccctctaacaaaa 2552507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 127
Target Start/End: Original strand, 4942375 - 4942479
Alignment:
Q  23 ttaaatgtgtcatacattgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaaga 122  Q
    ||||||| |||  |||||||||| ||| ||||  ||||||||||||| |||||| |||| |  ||||||||||| ||||| |||||||| |||||||||     
T  4942375 ttaaatgagtctcacattgacacgtcatttttatataattttttaatgatagtatctaacagatactcaaccacaccaatagagaccctttaacaaaagg 4942474  T
Q  123 tctaa 127  Q
    |||||    
T  4942475 tctaa 4942479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 120
Target Start/End: Complemental strand, 38037515 - 38037431
Alignment:
Q  36 acattgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaa 120  Q
    |||| |||| |||| ||||| ||||||||||||||||| || |||||| |||||||| ||||||||| ||||  |||||||||||    
T  38037515 acatagacatatcatttttttataattttttaataataatatctaataggtactcaatcactccaatagagaatctctaacaaaa 38037431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 36 - 127
Target Start/End: Original strand, 5495586 - 5495677
Alignment:
Q  36 acattgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaa 127  Q
    |||||||||||||| ||||| || | |||||||||||||||||||||| | ||||||| ||| | ||||| | | || ||||||||||||||    
T  5495586 acattgacacatcagttttttattactttttaataatagtacctaataggcactcaactactacgatggatatcttccaacaaaagatctaa 5495677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 61 - 129
Target Start/End: Complemental strand, 32534951 - 32534881
Alignment:
Q  61 ttttttaataatagtacctaatatgtactcaaccactccaatg--gagaccctctaacaaaagatctaatt 129  Q
    |||||||||||| |||||||| | |||||||||||||||||||  |||||||||||||||||  |||||||    
T  32534951 ttttttaataatggtacctaaaaggtactcaaccactccaatggagagaccctctaacaaaatgtctaatt 32534881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 114
Target Start/End: Complemental strand, 26149017 - 26148939
Alignment:
Q  36 acattgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctcta 114  Q
    |||| ||||||||||||||| || |||||||||||||||||| |||||  ||||||||||||  ||| |||| ||||||    
T  26149017 acatggacacatcacttttttattattttttaataatagtacgtaatagatactcaaccactataatagagatcctcta 26148939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 73
Target Start/End: Complemental strand, 7053832 - 7053795
Alignment:
Q  36 acattgacacatcactttttaataattttttaataata 73  Q
    ||||||||||||||||||||||||||||||||||||||    
T  7053832 acattgacacatcactttttaataattttttaataata 7053795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 120
Target Start/End: Original strand, 33494723 - 33494783
Alignment:
Q  59 aattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaa 120  Q
    ||||||||||||||||||||||||| ||||||| | |||||||| |||| ||||||||||||    
T  33494723 aattttttaataatagtacctaataggtactcagctactccaatagaga-cctctaacaaaa 33494783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 42 - 108
Target Start/End: Original strand, 606403 - 606469
Alignment:
Q  42 acacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagac 108  Q
    |||||||||||||| || ||||||||| || ||||||||||| |||||||  |||||||||| ||||    
T  606403 acacatcacttttttattattttttaacaacagtacctaataggtactcattcactccaatgtagac 606469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 60 - 109
Target Start/End: Original strand, 15635250 - 15635299
Alignment:
Q  60 attttttaataatagtacctaatatgtactcaaccactccaatggagacc 109  Q
    |||||||||||| ||||||||||| |||||||  ||||||||||||||||    
T  15635250 attttttaataagagtacctaataggtactcattcactccaatggagacc 15635299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 139
Target Start/End: Original strand, 15072114 - 15072207
Alignment:
Q  42 acacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaattgagtcccacc 139  Q
    |||||||||||||||    |||| |||||| ||||||||||| ||||||   ||||| |||||||| | ||||||||||  ||||| |||||||||||    
T  15072114 acacatcacttttta----ttttataataacagtacctaataggtactcggtcactctaatggagatcttctaacaaaaagtctaaatgagtcccacc 15072207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 127
Target Start/End: Complemental strand, 10933606 - 10933539
Alignment:
Q  60 attttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaa 127  Q
    |||||||||||||||||| ||||| |||||||| |||| ||||||| |  ||||| |||||| |||||    
T  10933606 attttttaataatagtacttaataggtactcaatcacttcaatggatattctctatcaaaaggtctaa 10933539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 101
Target Start/End: Original strand, 19494985 - 19495044
Alignment:
Q  42 acacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaa 101  Q
    |||||||||||||| || ||||| |||||| ||||||||||| |||||||  ||||||||    
T  19494985 acacatcacttttttattattttataataacagtacctaataggtactcagtcactccaa 19495044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 127
Target Start/End: Complemental strand, 40976528 - 40976461
Alignment:
Q  60 attttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaa 127  Q
    |||||| |||||| ||| |||||| ||||||||||||| ||||||| | |||||| |||||| |||||    
T  40976528 atttttaaataattgtaactaataggtactcaaccactacaatggacatcctctatcaaaaggtctaa 40976461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 57 - 102
Target Start/End: Original strand, 1309756 - 1309801
Alignment:
Q  57 ataattttttaataatagtacctaatatgtactcaaccactccaat 102  Q
    |||||||||||||||||||| |||||| | |||||| |||||||||    
T  1309756 ataattttttaataatagtatctaataagcactcaatcactccaat 1309801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 107
Target Start/End: Original strand, 32273615 - 32273680
Alignment:
Q  42 acacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggaga 107  Q
    |||||||||||||| || ||||||||||||  ||| |||||| |||||||  ||||| ||||||||    
T  32273615 acacatcacttttttatcattttttaataacggtatctaataagtactcattcactctaatggaga 32273680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1114 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold1114
Description:

Target: scaffold1114; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 23 - 139
Target Start/End: Complemental strand, 2463 - 2347
Alignment:
Q  23 ttaaatgtgtcatacattgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaaga 122  Q
    ||||||| |||  |||| |||||||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||     
T  2463 ttaaatgggtcccacatagacacatcacattttaataatattttaataatagtacctaataggtactcaaccactccaatggagaccctctaacaaaagg 2364  T
Q  123 tctaattgagtcccacc 139  Q
    |||||||| ||| ||||    
T  2363 tctaattgggtcgcacc 2347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 77; Significance: 7e-36; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 38 - 130
Target Start/End: Complemental strand, 39193387 - 39193295
Alignment:
Q  38 attgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaattg 130  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  39193387 attgacacatcactttttaataattttttaacaatggtacctaatagttactcaaccactccaatggagaccctctaacaaaagatctaattg 39193295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 23 - 139
Target Start/End: Complemental strand, 45064338 - 45064223
Alignment:
Q  23 ttaaatgtgtcatacattgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaaga 122  Q
    ||||||| |||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||| |||||||||||||     
T  45064338 ttaaatgagtctcacattgacacatcactttttaataattttttaataatagtacctaataggtactcagccact-caatggagatcctctaacaaaagg 45064240  T
Q  123 tctaattgagtcccacc 139  Q
    |||||||| ||||||||    
T  45064239 tctaattgggtcccacc 45064223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 36 - 139
Target Start/End: Complemental strand, 40047124 - 40047021
Alignment:
Q  36 acattgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaattgagtcc 135  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||  |||||||||||| |||| |||||||||||||||||  | |||||| ||||    
T  40047124 acattgacacatcattttttaataattttttaataatagtacctaatagatactcaaccacttcaatagagaccctctaacaaaaagtttaattgggtcc 40047025  T
Q  136 cacc 139  Q
    ||||    
T  40047024 cacc 40047021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 23 - 137
Target Start/End: Original strand, 40757780 - 40757895
Alignment:
Q  23 ttaaatgtgtcatacattgacacatcactttttaataatttt-ttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaag 121  Q
    ||||||| |||  |||||||||||| ||||||||||| |||| ||||||| | |||||||||||||||||||||||  |||||||||||||||| |||||    
T  40757780 ttaaatgagtctcacattgacacataactttttaatattttttttaataagaatacctaatatgtactcaaccactttaatggagaccctctaataaaag 40757879  T
Q  122 atctaattgagtccca 137  Q
     |||||||| ||||||    
T  40757880 gtctaattgggtccca 40757895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 36 - 118
Target Start/End: Original strand, 22424989 - 22425071
Alignment:
Q  36 acattgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaa 118  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||   ||||||||||||||    
T  22424989 acatggacacatcactttttgataattttttaataatagtacctaataggtactcaaccactccaacacagaccctctaacaa 22425071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 45 - 128
Target Start/End: Original strand, 37247188 - 37247271
Alignment:
Q  45 catcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaat 128  Q
    |||||||||||||||||||||||||||||| |  ||||| ||||||||||||||||||||||| ||| ||||||||| ||||||    
T  37247188 catcactttttaataattttttaataatagcatttaataggtactcaaccactccaatggagatcctttaacaaaaggtctaat 37247271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 36 - 127
Target Start/End: Complemental strand, 51997352 - 51997261
Alignment:
Q  36 acattgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaa 127  Q
    ||||| |||||||||||||| || |||||||||||||||||||||||| ||||||||||||| ||||||||| |||  |||||||| |||||    
T  51997352 acattaacacatcacttttttattattttttaataatagtacctaataggtactcaaccactacaatggagatccttcaacaaaaggtctaa 51997261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 35 - 120
Target Start/End: Original strand, 45047091 - 45047177
Alignment:
Q  35 tacattgacacatcacttttta-ataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaa 120  Q
    ||||||||||| |||||||||  ||||| ||||||| ||||||||||||| |||||||||||||| ||| |||||||||||||||||    
T  45047091 tacattgacacgtcactttttttataatattttaatgatagtacctaataggtactcaaccactcaaatagagaccctctaacaaaa 45047177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 44 - 137
Target Start/End: Complemental strand, 36219219 - 36219126
Alignment:
Q  44 acatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaattgagtccca 137  Q
    |||||||||||| || |||||||||||||||||||||||| |||||||| |||||||||||||| | |||| |||||  ||||| || ||||||    
T  36219219 acatcacttttttattattttttaataatagtacctaataggtactcaatcactccaatggagatcatctatcaaaatgtctaaatgggtccca 36219126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 42 - 139
Target Start/End: Original strand, 6076663 - 6076760
Alignment:
Q  42 acacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaattgagtcccacc 139  Q
    |||||||||||||| || ||||| |||||||||||||||||| |||||||  ||||||||| |||| | ||||||||||  ||||| || ||||||||    
T  6076663 acacatcacttttttattattttataataatagtacctaataggtactcagtcactccaatagagatcttctaacaaaaagtctaaatgggtcccacc 6076760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 57 - 139
Target Start/End: Original strand, 6077906 - 6077986
Alignment:
Q  57 ataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaattgagtcccacc 139  Q
    ||||||||||||||||||||||||||  |||||||||||||||||| |||| | | |||||||| || ||| |||||||||||    
T  6077906 ataattttttaataatagtacctaat--gtactcaaccactccaatagagatcatataacaaaatatttaaatgagtcccacc 6077986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 60 - 127
Target Start/End: Complemental strand, 51676955 - 51676888
Alignment:
Q  60 attttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaa 127  Q
    ||||||||||||||| |||||||| ||||||||||||| ||||||||| |||| |||||||| |||||    
T  51676955 attttttaataatagaacctaataggtactcaaccactacaatggagatcctccaacaaaaggtctaa 51676888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 35 - 121
Target Start/End: Complemental strand, 2062500 - 2062414
Alignment:
Q  35 tacattgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaag 121  Q
    ||||| ||||||| |||| ||||| |||||||||||||||||| ||||| |||||||||||||| |||| | | | |||||||||||    
T  2062500 tacatggacacattacttcttaatgattttttaataatagtacttaataggtactcaaccactctaatgaaaatcttctaacaaaag 2062414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 36 - 135
Target Start/End: Complemental strand, 2129079 - 2128988
Alignment:
Q  36 acattgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaattgagtcc 135  Q
    |||||||||||||| |||||| ||||||||||||||||       ||| |||||||| ||||| |||||||||||||||||||||||| |||||| ||||    
T  2129079 acattgacacatcatttttta-taattttttaataata-------ataggtactcaatcactctaatggagaccctctaacaaaagatttaattgggtcc 2128988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 51 - 120
Target Start/End: Complemental strand, 25479848 - 25479779
Alignment:
Q  51 tttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaa 120  Q
    ||||| |||||||||||||||||||| |||||| ||||||||||||| |||| |||| | ||||||||||    
T  25479848 ttttttataattttttaataatagtatctaataagtactcaaccacttcaatagagatcttctaacaaaa 25479779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 36 - 137
Target Start/End: Complemental strand, 26417340 - 26417240
Alignment:
Q  36 acattgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaattgagtcc 135  Q
    ||||| |||||||| |||||| || |||||||||||| |||||||||| |||||||||||||||||||  || ||| || |||||||| ||| || ||||    
T  26417340 acattaacacatcattttttatta-ttttttaataatggtacctaataggtactcaaccactccaatgttgatcctatatcaaaagatataaatgggtcc 26417242  T
Q  136 ca 137  Q
    ||    
T  26417241 ca 26417240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 42 - 107
Target Start/End: Complemental strand, 38298680 - 38298615
Alignment:
Q  42 acacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggaga 107  Q
    |||||||||||||| || |||||||||||| ||||||||||| ||||||| ||||||||| |||||    
T  38298680 acacatcacttttttattattttttaataacagtacctaataggtactcatccactccaaaggaga 38298615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 60 - 121
Target Start/End: Original strand, 40946184 - 40946245
Alignment:
Q  60 attttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaag 121  Q
    ||||||||||||||| | |||||| |||||||||||||||||| |||||||| |||||||||    
T  40946184 attttttaataatagcatctaataggtactcaaccactccaatagagaccctttaacaaaag 40946245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 138
Target Start/End: Complemental strand, 30599890 - 30599794
Alignment:
Q  42 acacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaattgagtcccac 138  Q
    |||||||||||||| || |||||||||||| ||||||||| | |||||||  |||||||||||||||| | |  |||||  ||||| ||||||||||    
T  30599890 acacatcacttttttattattttttaataacagtacctaaaaggtactcattcactccaatggagaccttatggcaaaaagtctaaatgagtcccac 30599794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 46 - 120
Target Start/End: Complemental strand, 8757532 - 8757459
Alignment:
Q  46 atcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaa 120  Q
    ||||||||||| |||||||||||||||||||  ||||| ||||||||||| |||||| |||| |||||| |||||    
T  8757532 atcacttttta-taattttttaataatagtatttaataggtactcaaccattccaatagagatcctctaccaaaa 8757459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 83
Target Start/End: Original strand, 23928191 - 23928233
Alignment:
Q  41 gacacatcactttttaataattttttaataatagtacctaata 83  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  23928191 gacacatcacttttttataattttttaataatagtacctaata 23928233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 86 - 139
Target Start/End: Original strand, 32212712 - 32212765
Alignment:
Q  86 tactcaaccactccaatggagaccctctaacaaaagatctaattgagtcccacc 139  Q
    ||||||||||||||||| |||||||||||||||||| ||||| || ||||||||    
T  32212712 tactcaaccactccaatagagaccctctaacaaaaggtctaaatgggtcccacc 32212765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 139
Target Start/End: Original strand, 46061417 - 46061486
Alignment:
Q  70 aatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaattgagtcccacc 139  Q
    |||||||||||| ||||||||||||||||||||  ||||| ||||| |||| |||||| ||||| |||||    
T  46061417 aatagtacctaacatgtactcaaccactccaataaagaccatctaataaaatatctaaatgagtaccacc 46061486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 120
Target Start/End: Original strand, 29627922 - 29627982
Alignment:
Q  60 attttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaa 120  Q
    |||||||||| |||||| |||||| ||||||||||||||||||| ||| |||||| |||||    
T  29627922 attttttaatcatagtatctaataggtactcaaccactccaatgaagatcctctatcaaaa 29627982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 103
Target Start/End: Complemental strand, 5834302 - 5834236
Alignment:
Q  36 acattgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatg 103  Q
    |||||||||||||||||||| || ||||||| |||||||||| ||||| |||||||| |||| |||||    
T  5834302 acattgacacatcacttttttattatttttt-ataatagtacataataggtactcaatcactgcaatg 5834236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 139
Target Start/End: Original strand, 34483499 - 34483600
Alignment:
Q  36 acattgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaattgagtcc 135  Q
    |||| |||||||||||||||| || ||||||||||| | || |||||| |||||||||||||||||||| || | |||| |||||  ||||| || ||||    
T  34483499 acatggacacatcactttttatta-ttttttaataaaa-tatctaataggtactcaaccactccaatggtgatcatctatcaaaatgtctaaatgggtcc 34483596  T
Q  136 cacc 139  Q
    ||||    
T  34483597 cacc 34483600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 42 - 120
Target Start/End: Original strand, 3161720 - 3161798
Alignment:
Q  42 acacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaa 120  Q
    |||||| ||||||| || |||||||||||| ||||||||||| |||||||  |||||||||  ||||| ||| ||||||    
T  3161720 acacattacttttttattattttttaataacagtacctaataggtactcattcactccaataaagaccttctgacaaaa 3161798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 46 - 120
Target Start/End: Complemental strand, 55970321 - 55970247
Alignment:
Q  46 atcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaa 120  Q
    ||||||||||  |||||||||||||||||||| ||||| |||  ||||||||| ||| ||||||||  |||||||    
T  55970321 atcacttttttgtaattttttaataatagtacataataggtatgcaaccactctaatagagaccctgcaacaaaa 55970247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 127
Target Start/End: Original strand, 258265 - 258326
Alignment:
Q  66 taataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaa 127  Q
    ||||||||| || ||||| ||||||||||||| ||||||||| |||||| |||||| |||||    
T  258265 taataatagcacataataggtactcaaccacttcaatggagatcctctatcaaaaggtctaa 258326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 95
Target Start/End: Complemental strand, 1586553 - 1586496
Alignment:
Q  38 attgacacatcactttttaataattttttaataatagtacctaatatgtactcaacca 95  Q
    |||||||| ||||||||| ||||||||||||| | ||||| ||||| |||||||||||    
T  1586553 attgacacgtcacttttttataattttttaatgacagtacttaataggtactcaacca 1586496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 102
Target Start/End: Original strand, 37274761 - 37274822
Alignment:
Q  42 acacatcacttttta-ataattttttaataatagtacctaatatgtactcaaccactccaat 102  Q
    ||||||||||||||  || |||||||||||||||||||| ||| ||||||||||| ||||||    
T  37274761 acacatcactttttttattattttttaataatagtacctgataggtactcaaccattccaat 37274822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 104
Target Start/End: Complemental strand, 51175669 - 51175605
Alignment:
Q  40 tgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatgg 104  Q
    ||||||||||||| || ||||||||||||||| |||||||| || | ||||||  ||||||||||    
T  51175669 tgacacatcacttatttataattttttaataaaagtacctattaaggactcaatgactccaatgg 51175605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 92
Target Start/End: Original strand, 53455060 - 53455117
Alignment:
Q  35 tacattgacacatcactttttaataattttttaataatagtacctaatatgtactcaa 92  Q
    ||||| |||| |||| ||||||||||| ||||||||||||||  ||||| ||||||||    
T  53455060 tacatggacatatcaatttttaataatattttaataatagtatttaataagtactcaa 53455117  T

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Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 80
Target Start/End: Original strand, 31767788 - 31767828
Alignment:
Q  40 tgacacatcactttttaataattttttaataatagtaccta 80  Q
    ||||||||||||| || ||||||||||||||| ||||||||    
T  31767788 tgacacatcacttatttataattttttaataaaagtaccta 31767828  T

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Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 93
Target Start/End: Original strand, 32212184 - 32212216
Alignment:
Q  61 ttttttaataatagtacctaatatgtactcaac 93  Q
    ||||||||||||||||||||||| |||||||||    
T  32212184 ttttttaataatagtacctaataggtactcaac 32212216  T

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Target: chr2 (Bit Score: 71; Significance: 3e-32; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 11916084 - 11915994
Alignment:
Q  36 acattgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatcta 126  Q
    |||| ||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  11916084 acatggacacattacttttttataattttttaataatagtacctaataggtactcaaccactccaatggagaccctctaacaaaaggtcta 11915994  T

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Target: chr2; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 36 - 138
Target Start/End: Original strand, 11511892 - 11511994
Alignment:
Q  36 acattgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaattgagtcc 135  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||| |||||| |||||| ||||| || ||||    
T  11511892 acatggacacatcactttttaattattttttaataatagtacctaataggtactcaaccactccaatagagatcctctatcaaaaggtctaaatgggtcc 11511991  T
Q  136 cac 138  Q
    |||    
T  11511992 cac 11511994  T

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Target: chr2; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 449043 - 449114
Alignment:
Q  36 acattgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggaga 107  Q
    |||| ||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  449043 acatggacacataactttttaatatttttttaataatagtacttaatatgtactcaaccactccaatggaga 449114  T

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Target: chr2; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 36 - 139
Target Start/End: Original strand, 4062546 - 4062649
Alignment:
Q  36 acattgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaattgagtcc 135  Q
    |||| ||||||||||||||| ||||||||||||||||||||  ||||| ||||||||| ||| ||||||||| |||| |||||||| ||||  || ||||    
T  4062546 acatggacacatcacttttttataattttttaataatagtatataataggtactcaacaactacaatggagaacctccaacaaaaggtctatatgggtcc 4062645  T
Q  136 cacc 139  Q
    ||||    
T  4062646 cacc 4062649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 61 - 139
Target Start/End: Complemental strand, 20683472 - 20683394
Alignment:
Q  61 ttttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaattgagtcccacc 139  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||| |||||| ||||| || ||| || ||||||||    
T  20683472 ttttttaataatagtacctaataggtactcaatcactccaatggagatcctctatcaaaatatataaatgggtcccacc 20683394  T

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Target: chr2; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 51 - 121
Target Start/End: Complemental strand, 39445989 - 39445919
Alignment:
Q  51 tttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaag 121  Q
    ||||| ||||||||||||| ||||||||||||| ||| |||||||||||||| ||||||||| ||||||||    
T  39445989 ttttttataattttttaatgatagtacctaataggtattcaaccactccaatagagaccctccaacaaaag 39445919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 51 - 126
Target Start/End: Original strand, 7772781 - 7772856
Alignment:
Q  51 tttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatcta 126  Q
    ||||| |||||||||||||||||||| |||||| ||||||||| ||| |||||||||| ||| |||||||| ||||    
T  7772781 ttttttataattttttaataatagtatctaataggtactcaacaactgcaatggagactctccaacaaaaggtcta 7772856  T

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Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 120
Target Start/End: Original strand, 448806 - 448866
Alignment:
Q  60 attttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaa 120  Q
    ||||||||||||||||| |||||| |||||||| |||| |||| ||||| |||||||||||    
T  448806 attttttaataatagtatctaataggtactcaaacacttcaatagagactctctaacaaaa 448866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 135
Target Start/End: Original strand, 27974419 - 27974494
Alignment:
Q  60 attttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaattgagtcc 135  Q
    |||||||||||||||||| |||||  |||||||||||| |||| ||||| || ||||||||  ||||| |||||||    
T  27974419 attttttaataatagtacttaatagatactcaaccacttcaatagagactctttaacaaaatgtctaaatgagtcc 27974494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 135
Target Start/End: Original strand, 28060948 - 28061023
Alignment:
Q  60 attttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaattgagtcc 135  Q
    |||||||||||||||||| |||||  |||||||||||| |||| ||||| || ||||||||  ||||| |||||||    
T  28060948 attttttaataatagtacttaatagatactcaaccacttcaatagagactctttaacaaaatgtctaaatgagtcc 28061023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 42 - 139
Target Start/End: Original strand, 5552335 - 5552433
Alignment:
Q  42 acacatcacttttta-ataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaattgagtcccacc 139  Q
    ||||||||||||||  || ||||| |||||| ||||||||||| ||||||   |||||||||||||| | ||||||||||  ||||| || ||||||||    
T  5552335 acacatcactttttttattattttataataaaagtacctaataggtactcggtcactccaatggagatcttctaacaaaaagtctaaatgtgtcccacc 5552433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 4634102 - 4634045
Alignment:
Q  42 acacatcactttttaataattttttaataatagtacctaatatgtactcaaccactcc 99  Q
    |||||||| ||||  ||||||||||||||||||||||||||| | |||||| ||||||    
T  4634102 acacatcatttttgtataattttttaataatagtacctaataagaactcaatcactcc 4634045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 120
Target Start/End: Complemental strand, 43302442 - 43302355
Alignment:
Q  36 acattgacacatca---ctttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaa 120  Q
    ||||||||||||||    ||||| |||| |||||||||||||||| ||||  |||||||||||||||||  ||||| |||||| ||||    
T  43302442 acattgacacatcattttttttttataactttttaataatagtacttaattggtactcaaccactccaacagagactctctaataaaa 43302355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 109
Target Start/End: Original strand, 9973817 - 9973865
Alignment:
Q  61 ttttttaataatagtacctaatatgtactcaaccactccaatggagacc 109  Q
    ||||||||||| ||||||||||| |||| ||||||||||||| ||||||    
T  9973817 ttttttaataacagtacctaataggtacccaaccactccaatagagacc 9973865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 121
Target Start/End: Complemental strand, 37848063 - 37848003
Alignment:
Q  61 ttttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaag 121  Q
    ||||||||||||||||  ||||| |||||||||||||| | |||||||| | |||||||||    
T  37848063 ttttttaataatagtatataataagtactcaaccactcaattggagaccttttaacaaaag 37848003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 9043046 - 9043117
Alignment:
Q  49 actttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaa 120  Q
    ||||||| |||| ||||||||||||||| |||||  |||| ||||||||  ||| |||| ||||||||||||    
T  9043046 acttttttataaatttttaataatagtatctaattggtacccaaccactttaatagagatcctctaacaaaa 9043117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 138
Target Start/End: Original strand, 9707256 - 9707349
Alignment:
Q  46 atcactttttaataattttttaataatagtacctaa-tatgtactcaaccactccaatggagaccctctaacaaaagatctaattgagtcccac 138  Q
    |||||||||| || |||||||||||| ||||||||| || |||||||  |||||||||||| | | ||| ||||||  ||||| || |||||||    
T  9707256 atcacttttttattattttttaataacagtacctaattaggtactcattcactccaatggaaatcttctgacaaaaattctaaatgggtcccac 9707349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 83
Target Start/End: Complemental strand, 34375193 - 34375152
Alignment:
Q  42 acacatcactttttaataattttttaataatagtacctaata 83  Q
    ||||||||||| || |||||||||||||| ||||||||||||    
T  34375193 acacatcacttatttataattttttaatagtagtacctaata 34375152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 7e-30; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 38 - 139
Target Start/End: Complemental strand, 52669857 - 52669755
Alignment:
Q  38 attgacacatcactttttaataatttttt-aataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaattgagtccc 136  Q
    |||||||||||| |||||||| ||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||||| | |||||| |||||    
T  52669857 attgacacatcattttttaatgatttttttaataatagtatctaataggtactcaaccactccaatggagaccctctaacaaaaggtttaattgggtccc 52669758  T
Q  137 acc 139  Q
    |||    
T  52669757 acc 52669755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 23 - 139
Target Start/End: Complemental strand, 22909535 - 22909419
Alignment:
Q  23 ttaaatgtgtcatacattgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaaga 122  Q
    ||||||| |||  ||||||| |||||||| ||||||||||||||||||||||||  ||||| ||||||||||||| |||||||||||||||| ||||||     
T  22909535 ttaaatgggtcgcacattgatacatcactatttaataattttttaataatagtatttaataggtactcaaccacttcaatggagaccctctagcaaaagg 22909436  T
Q  123 tctaattgagtcccacc 139  Q
     ||||||| ||||||||    
T  22909435 cctaattgggtcccacc 22909419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 23 - 127
Target Start/End: Complemental strand, 48458077 - 48457973
Alignment:
Q  23 ttaaatgtgtcatacattgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaaga 122  Q
    ||||||| |||  |||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||| ||| |||| ||||||||||||||||||     
T  48458077 ttaaatgggtcccacattgacacatcacttttttataattttttaatgatagtacctaataggtactcaactacttcaatagagaccctctaacaaaagg 48457978  T
Q  123 tctaa 127  Q
    |||||    
T  48457977 tctaa 48457973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 36 - 139
Target Start/End: Complemental strand, 4489608 - 4489505
Alignment:
Q  36 acattgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaattgagtcc 135  Q
    ||||| ||| |||| |||||||||||||||||||||||||| |||||| | ||||||||||| ||||||||||||||||||||||  |||||||| ||||    
T  4489608 acatttacagatcattttttaataattttttaataatagtatctaataggcactcaaccactacaatggagaccctctaacaaaatgtctaattgggtcc 4489509  T
Q  136 cacc 139  Q
    ||||    
T  4489508 cacc 4489505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 36 - 120
Target Start/End: Original strand, 29178549 - 29178634
Alignment:
Q  36 acattgacacatcactttttaataatttt-ttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaa 120  Q
    |||| ||||||||| |||||||||||||| ||||||||| ||| ||||| ||| |||| ||||||||||||||||||||| |||||    
T  29178549 acatcgacacatcattttttaataatttttttaataataatacttaataggtattcaaacactccaatggagaccctctagcaaaa 29178634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 62 - 119
Target Start/End: Complemental strand, 45707761 - 45707704
Alignment:
Q  62 tttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaa 119  Q
    |||||||||||||||||||||| |||||||||||||||||| |||| |||||||||||    
T  45707761 tttttaataatagtacctaataggtactcaaccactccaatagagatcctctaacaaa 45707704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 51 - 120
Target Start/End: Original strand, 52119970 - 52120039
Alignment:
Q  51 tttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaa 120  Q
    |||||||||||||||||||||||||| ||||||  |||||||||||| |||||||||||  |||||||||    
T  52119970 tttttaataattttttaataatagtaactaatagatactcaaccactacaatggagaccagctaacaaaa 52120039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 44 - 123
Target Start/End: Complemental strand, 50596245 - 50596166
Alignment:
Q  44 acatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagat 123  Q
    |||||| ||||| || |||||||||||||||||||||||| |||||||||||||| ||| |||| | |||| ||||||||    
T  50596245 acatcatttttttattattttttaataatagtacctaataggtactcaaccactcaaatagagatcttctatcaaaagat 50596166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 60 - 138
Target Start/End: Complemental strand, 47968179 - 47968101
Alignment:
Q  60 attttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaattgagtcccac 138  Q
    |||||||||||||| ||| ||||| |||||||||||||| |||||||| ||||||||||||  |||||| | |||||||    
T  47968179 attttttaataataatacttaataggtactcaaccactctaatggagatcctctaacaaaatgtctaatagggtcccac 47968101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 42 - 119
Target Start/End: Complemental strand, 28963818 - 28963741
Alignment:
Q  42 acacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaa 119  Q
    ||||||||||||||||| ||||| ||||||  |||||||||| |||||||  |||||||||||||| | |||||||||    
T  28963818 acacatcactttttaattattttataataacggtacctaataggtactcagtcactccaatggagatcttctaacaaa 28963741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 44 - 113
Target Start/End: Original strand, 40485072 - 40485141
Alignment:
Q  44 acatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctct 113  Q
    |||||| | ||| ||||||||||||||||||||||||||| | | ||||||||||||||| |||||||||    
T  40485072 acatcattcttttataattttttaataatagtacctaataagcattcaaccactccaatgaagaccctct 40485141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 139
Target Start/End: Original strand, 38138224 - 38138303
Alignment:
Q  60 attttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaattgagtcccacc 139  Q
    |||||||||||||||||||||||| ||||||||||| | ||||| ||| |||||| |||||  ||||| ||| |||||||    
T  38138224 attttttaataatagtacctaataggtactcaaccaattcaatgaagatcctctatcaaaatgtctaaatgaatcccacc 38138303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 36 - 127
Target Start/End: Complemental strand, 53143691 - 53143601
Alignment:
Q  36 acattgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaa 127  Q
    ||||||| || ||||||||| ||||||||| ||| |||||||||||||  ||||||||||||||||| |||||  ||||  |||||||||||    
T  53143691 acattgaaacgtcactttttcataattttt-aattatagtacctaatagatactcaaccactccaatagagacaatctattaaaagatctaa 53143601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 120
Target Start/End: Complemental strand, 7886109 - 7886022
Alignment:
Q  36 acattgacacatcact---ttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaa 120  Q
    |||| |||||||||||   |||| ||||||||| |||||||||||| |||| ||||||| ||| |||||| ||||| |||||||||||    
T  7886109 acatagacacatcactttttttttataatttttcaataatagtaccaaataggtactcagccattccaatagagactctctaacaaaa 7886022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 120
Target Start/End: Complemental strand, 21080064 - 21079980
Alignment:
Q  35 tacattgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaa 120  Q
    ||||||||||||||| |||||| || ||||||||||||||||  ||||| ||||||||||||| |||| |||| | |||| |||||    
T  21080064 tacattgacacatcattttttatta-ttttttaataatagtatttaataggtactcaaccacttcaatagagatcatctatcaaaa 21079980  T

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Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 14464987 - 14465059
Alignment:
Q  23 ttaaatgtgtcatacattgacacatcactttttaataattttttaataatagtacctaatatgtactcaacca 95  Q
    ||||||| ||| ||| ||||||||| |||||||| |||||||||||||||||||  ||||| | |||||||||    
T  14464987 ttaaatgggtcctaccttgacacattactttttattaattttttaataatagtatttaataggcactcaacca 14465059  T

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Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 14476899 - 14476947
Alignment:
Q  91 aaccactccaatggagaccctctaacaaaagatctaattgagtcccacc 139  Q
    ||||||||||||||| ||||||||||||||| |||||||  ||||||||    
T  14476899 aaccactccaatggaaaccctctaacaaaaggtctaattaggtcccacc 14476947  T

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Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 108
Target Start/End: Complemental strand, 42004405 - 42004339
Alignment:
Q  42 acacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagac 108  Q
    |||||||||||||| || |||||||||||| | |  |||||| |||||||  |||||||||||||||    
T  42004405 acacatcacttttttattattttttaataacaatttctaataagtactcattcactccaatggagac 42004339  T

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Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 120
Target Start/End: Original strand, 25926390 - 25926447
Alignment:
Q  63 ttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaa 120  Q
    |||||||||||||||| ||||  |||||||||||| ||||||||| | |||| |||||    
T  25926390 ttttaataatagtacccaatagatactcaaccacttcaatggagatcatctatcaaaa 25926447  T

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Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 95
Target Start/End: Complemental strand, 47180713 - 47180680
Alignment:
Q  62 tttttaataatagtacctaatatgtactcaacca 95  Q
    |||||||||||||||||||||| |||||||||||    
T  47180713 tttttaataatagtacctaataggtactcaacca 47180680  T

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Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 127
Target Start/End: Original strand, 39095858 - 39095906
Alignment:
Q  79 taatatgtactcaaccactccaatggagaccctctaacaaaagatctaa 127  Q
    ||||| ||||||||||||| |||||||||| |||||| ||||| |||||    
T  39095858 taataggtactcaaccactacaatggagacactctaataaaaggtctaa 39095906  T

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Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 127
Target Start/End: Original strand, 39096037 - 39096085
Alignment:
Q  79 taatatgtactcaaccactccaatggagaccctctaacaaaagatctaa 127  Q
    ||||| ||||||||||||| |||||||||| |||||| ||||| |||||    
T  39096037 taataggtactcaaccactacaatggagacactctaataaaaggtctaa 39096085  T

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Target: scaffold0110 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 60 - 139
Target Start/End: Original strand, 26734 - 26813
Alignment:
Q  60 attttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaattgagtcccacc 139  Q
    |||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||| |||||||| ||| ||||    
T  26734 attttttaataatagtacctaataggtattcaaccactccaatagagaccctctaacaaaaggtctaattgggtctcacc 26813  T

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Target: scaffold0578 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0578
Description:

Target: scaffold0578; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 23 - 138
Target Start/End: Original strand, 9928 - 10043
Alignment:
Q  23 ttaaatgtgtcatacattgacacatcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaaga 122  Q
    ||||||| |||  |||| |||| |||| ||||||||||||||||||||||| ||| ||||| ||||||||||||||||||| ||| ||| ||||||||      
T  9928 ttaaatgggtcgcacatggacatatcattttttaataattttttaataataatacttaataggtactcaaccactccaatgaagatcctttaacaaaaat 10027  T
Q  123 tctaattgagtcccac 138  Q
    | |||| |||||||||    
T  10028 tttaatagagtcccac 10043  T

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Target: scaffold0067 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 57 - 121
Target Start/End: Complemental strand, 395 - 328
Alignment:
Q  57 ataattttttaataatagtacctaatat---gtactcaaccactccaatggagaccctctaacaaaag 121  Q
    ||||||||||||| ||||||||||||||   |||||||||||||||||| ||||||||||| ||||||    
T  395 ataattttttaatgatagtacctaatattaggtactcaaccactccaatagagaccctctagcaaaag 328  T

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Target: scaffold0092 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 46 - 120
Target Start/End: Original strand, 4799 - 4873
Alignment:
Q  46 atcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaa 120  Q
    |||| ||||| | |||| |||||||||||||||||||| |||  ||||||||||||| ||||  |||||||||||    
T  4799 atcatttttttacaattatttaataatagtacctaataggtatccaaccactccaatagagattctctaacaaaa 4873  T

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Target: scaffold0154 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 139
Target Start/End: Complemental strand, 27085 - 26992
Alignment:
Q  46 atcactttttaataattttttaataatagtacctaatatgtactcaaccactccaatggagaccctctaacaaaagatctaattgagtcccacc 139  Q
    |||||||||| || ||||| ||||||  |||||||||| ||||||   ||||||||| |||| | ||||| ||||  ||||| |||||||||||    
T  27085 atcacttttttattattttataataacggtacctaataggtactcggtcactccaatagagatcttctaataaaaagtctaaatgagtcccacc 26992  T

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