View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10140A_low_307 (Length: 246)
Name: NF10140A_low_307
Description: NF10140A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10140A_low_307 |
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Alignment Details
Target: chr8 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 13 - 238
Target Start/End: Original strand, 20108556 - 20108781
Alignment:
| Q |
13 |
gacatcaaagaagagttaaataactagggttagttgagaaaaatataagcatgtacctatgctacaaaagatacattccagaatctaaaactcaataaag |
112 |
Q |
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| T |
20108556 |
gacatcaaagaagagttaaataactagggttagttgagaaaaatataagcatgtacctatgctgcaaaagacacattccagaatctaaaactcaataaag |
20108655 |
T |
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| Q |
113 |
gctattgtaacagcggtcgcaataaacatctcagcaatcgctgtgactgcaacctccctacaactgcaatctcaatttaaactttggtgtatctattttg |
212 |
Q |
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||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
20108656 |
gctattgtaacagcggtcgcaataaacatctcagcaaccgctgtgactgcaaccttcctacaactgcaatcccaatttaaactttggtgtatctattttg |
20108755 |
T |
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| Q |
213 |
gacatgaactccaacacgaaactcga |
238 |
Q |
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||||||||||| |||||||| ||||| |
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| T |
20108756 |
gacatgaactctaacacgaatctcga |
20108781 |
T |
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