View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10140A_low_311 (Length: 245)

Name: NF10140A_low_311
Description: NF10140A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10140A_low_311
NF10140A_low_311
[»] chr8 (45 HSPs)
chr8 (1-88)||(20734828-20734915)
chr8 (1-88)||(20743386-20743473)
chr8 (1-86)||(20726918-20727003)
chr8 (1-86)||(20739816-20739901)
chr8 (1-85)||(6032218-6032302)
chr8 (133-237)||(14820290-14820394)
chr8 (137-237)||(43851664-43851764)
chr8 (138-237)||(10108370-10108470)
chr8 (7-86)||(21473728-21473806)
chr8 (138-237)||(5554869-5554969)
chr8 (138-190)||(7689849-7689901)
chr8 (138-237)||(10108648-10108748)
chr8 (138-237)||(14820572-14820672)
chr8 (1-108)||(23640699-23640807)
chr8 (136-190)||(18044153-18044207)
chr8 (146-236)||(42112993-42113083)
chr8 (149-234)||(30789519-30789604)
chr8 (146-237)||(5555147-5555239)
chr8 (71-131)||(14336349-14336409)
chr8 (141-237)||(17623165-17623261)
chr8 (138-237)||(30789785-30789885)
chr8 (138-177)||(7689524-7689563)
chr8 (138-192)||(10171467-10171521)
chr8 (138-237)||(21147936-21148037)
chr8 (1-114)||(23266480-23266590)
chr8 (66-123)||(22103958-22104015)
chr8 (136-188)||(2583318-2583370)
chr8 (137-237)||(14767785-14767883)
chr8 (71-127)||(23601467-23601523)
chr8 (2-85)||(13386941-13387023)
chr8 (138-177)||(17622890-17622929)
chr8 (138-237)||(26136963-26137062)
chr8 (138-189)||(42606080-42606131)
chr8 (138-229)||(14767506-14767599)
chr8 (138-192)||(21148260-21148314)
chr8 (9-114)||(32024574-32024677)
chr8 (71-127)||(15831739-15831795)
chr8 (138-194)||(20877067-20877123)
chr8 (138-177)||(26136685-26136724)
chr8 (138-177)||(35367410-35367449)
chr8 (138-177)||(42113320-42113359)
chr8 (138-177)||(43481654-43481693)
chr8 (3-125)||(25644408-25644531)
chr8 (71-127)||(20026721-20026777)
chr8 (25-85)||(32007776-32007835)
[»] scaffold0081 (1 HSPs)
scaffold0081 (1-87)||(54564-54650)
[»] scaffold0132 (1 HSPs)
scaffold0132 (1-124)||(25045-25167)
[»] scaffold0044 (2 HSPs)
scaffold0044 (1-124)||(64385-64507)
scaffold0044 (1-124)||(80785-80906)
[»] chr4 (64 HSPs)
chr4 (1-124)||(9185433-9185555)
chr4 (1-124)||(9191298-9191420)
chr4 (1-85)||(15566255-15566339)
chr4 (1-85)||(15578902-15578986)
chr4 (1-124)||(9185880-9186002)
chr4 (1-85)||(20841134-20841217)
chr4 (138-237)||(37012985-37013084)
chr4 (138-237)||(38573969-38574068)
chr4 (136-237)||(3273898-3273998)
chr4 (141-237)||(38574246-38574343)
chr4 (140-237)||(48260029-48260126)
chr4 (138-237)||(9619257-9619357)
chr4 (136-236)||(15640714-15640814)
chr4 (141-237)||(3018014-3018112)
chr4 (138-237)||(9396977-9397076)
chr4 (138-237)||(13132219-13132317)
chr4 (139-237)||(35376164-35376262)
chr4 (136-237)||(31090058-31090161)
chr4 (135-237)||(9516888-9516991)
chr4 (138-237)||(46046430-46046524)
chr4 (138-192)||(31090385-31090439)
chr4 (138-192)||(31218305-31218359)
chr4 (1-114)||(44623544-44623656)
chr4 (138-191)||(3273621-3273674)
chr4 (137-237)||(26252515-26252616)
chr4 (141-189)||(9396702-9396750)
chr4 (25-117)||(23994978-23995070)
chr4 (138-237)||(46046702-46046801)
chr4 (139-237)||(9516611-9516710)
chr4 (138-237)||(12904747-12904846)
chr4 (139-237)||(34063983-34064082)
chr4 (140-237)||(9618982-9619080)
chr4 (138-237)||(31943950-31944050)
chr4 (138-192)||(36887680-36887734)
chr4 (138-192)||(41946965-41947019)
chr4 (136-190)||(41947180-41947234)
chr4 (138-177)||(18667629-18667668)
chr4 (143-237)||(37012712-37012807)
chr4 (138-177)||(48259823-48259862)
chr4 (143-233)||(48580148-48580239)
chr4 (71-125)||(736816-736870)
chr4 (66-127)||(3396610-3396672)
chr4 (138-192)||(12904908-12904962)
chr4 (71-127)||(22140426-22140482)
chr4 (71-127)||(22152340-22152396)
chr4 (141-229)||(35376414-35376502)
chr4 (136-192)||(43313535-43313591)
chr4 (3-85)||(7945740-7945819)
chr4 (134-177)||(13131936-13131979)
chr4 (1-84)||(26034410-26034491)
chr4 (138-177)||(31944289-31944328)
chr4 (138-177)||(50462735-50462774)
chr4 (138-192)||(3018334-3018388)
chr4 (207-237)||(3273692-3273722)
chr4 (143-177)||(4356219-4356253)
chr4 (203-237)||(7819080-7819114)
chr4 (1-55)||(14899348-14899402)
chr4 (139-177)||(15641055-15641093)
chr4 (203-233)||(18713026-18713056)
chr4 (1-85)||(50188753-50188835)
chr4 (1-85)||(17736-17819)
chr4 (1-85)||(38854403-38854487)
chr4 (138-190)||(36889004-36889056)
chr4 (143-175)||(48579871-48579903)
[»] scaffold0019 (2 HSPs)
scaffold0019 (1-101)||(22181-22281)
scaffold0019 (1-84)||(12479-12562)
[»] chr3 (67 HSPs)
chr3 (1-85)||(18709327-18709411)
chr3 (1-85)||(18693952-18694036)
chr3 (1-124)||(29458-29580)
chr3 (1-84)||(14253820-14253903)
chr3 (1-85)||(6195437-6195520)
chr3 (1-85)||(6203021-6203104)
chr3 (138-237)||(9266975-9267075)
chr3 (135-237)||(19720330-19720433)
chr3 (138-233)||(14262318-14262414)
chr3 (138-237)||(16722269-16722369)
chr3 (138-233)||(30500323-30500418)
chr3 (137-237)||(5800604-5800705)
chr3 (136-237)||(14162149-14162250)
chr3 (138-237)||(14171864-14171964)
chr3 (138-237)||(33372682-33372782)
chr3 (138-237)||(9267253-9267352)
chr3 (138-237)||(14171587-14171686)
chr3 (138-237)||(30500043-30500141)
chr3 (138-236)||(45969915-45970014)
chr3 (138-237)||(19112764-19112865)
chr3 (138-192)||(35995999-35996053)
chr3 (137-237)||(14161870-14161971)
chr3 (71-131)||(13555122-13555182)
chr3 (138-237)||(21633174-21633274)
chr3 (138-229)||(33372406-33372498)
chr3 (138-177)||(16721991-16722030)
chr3 (138-177)||(20853695-20853734)
chr3 (138-177)||(21632901-21632940)
chr3 (135-237)||(45003493-45003596)
chr3 (139-237)||(52552966-52553065)
chr3 (136-237)||(5800883-5800984)
chr3 (138-192)||(27946189-27946243)
chr3 (138-192)||(35995678-35995732)
chr3 (138-192)||(45970240-45970294)
chr3 (138-237)||(49986527-49986628)
chr3 (66-123)||(14425597-14425654)
chr3 (143-192)||(27946114-27946163)
chr3 (137-237)||(15328462-15328560)
chr3 (138-237)||(19113043-19113143)
chr3 (129-237)||(20853974-20854082)
chr3 (138-237)||(43572389-43572489)
chr3 (138-177)||(17465706-17465745)
chr3 (138-177)||(49986867-49986906)
chr3 (138-229)||(15328746-15328839)
chr3 (138-188)||(17465367-17465417)
chr3 (141-242)||(17649283-17649384)
chr3 (137-237)||(4204708-4204808)
chr3 (71-127)||(6957158-6957214)
chr3 (71-127)||(6971438-6971494)
chr3 (138-237)||(14262036-14262136)
chr3 (1-85)||(15527483-15527566)
chr3 (1-85)||(15536172-15536255)
chr3 (138-192)||(11003732-11003786)
chr3 (1-85)||(12558894-12558977)
chr3 (203-237)||(20853762-20853796)
chr3 (1-114)||(49965558-49965671)
chr3 (203-237)||(52552758-52552792)
chr3 (138-191)||(3425973-3426026)
chr3 (3-124)||(28703092-28703211)
chr3 (66-127)||(30012978-30013039)
chr3 (66-127)||(30022345-30022406)
chr3 (32-85)||(37254629-37254681)
chr3 (32-85)||(37264469-37264521)
chr3 (138-174)||(3424774-3424810)
chr3 (2-85)||(11628370-11628450)
chr3 (71-127)||(16469769-16469825)
chr3 (205-237)||(35995746-35995778)
[»] chr2 (48 HSPs)
chr2 (1-85)||(29755895-29755978)
chr2 (1-61)||(378065-378125)
chr2 (126-237)||(17850575-17850686)
chr2 (3-124)||(22935795-22935916)
chr2 (3-124)||(22941758-22941879)
chr2 (3-124)||(22955653-22955774)
chr2 (138-237)||(19251471-19251570)
chr2 (133-237)||(23806230-23806335)
chr2 (136-237)||(23854686-23854788)
chr2 (136-237)||(15106345-15106445)
chr2 (136-237)||(22263190-22263291)
chr2 (136-233)||(34548572-34548669)
chr2 (1-85)||(17332000-17332082)
chr2 (138-237)||(26236373-26236472)
chr2 (138-237)||(17463369-17463469)
chr2 (138-237)||(19251748-19251847)
chr2 (136-177)||(23855033-23855074)
chr2 (149-237)||(26135828-26135917)
chr2 (138-237)||(17850864-17850964)
chr2 (139-191)||(26560880-26560932)
chr2 (138-236)||(26236127-26236226)
chr2 (138-192)||(20498747-20498801)
chr2 (138-237)||(26560556-26560654)
chr2 (138-237)||(22263469-22263571)
chr2 (136-192)||(42670715-42670771)
chr2 (134-233)||(42671001-42671101)
chr2 (138-236)||(13254497-13254596)
chr2 (135-177)||(13254775-13254817)
chr2 (3-124)||(22517203-22517322)
chr2 (136-237)||(30390457-30390559)
chr2 (135-177)||(44098961-44099003)
chr2 (137-190)||(26136143-26136196)
chr2 (138-194)||(12419044-12419100)
chr2 (138-194)||(12431104-12431160)
chr2 (138-177)||(15106067-15106106)
chr2 (138-177)||(23046707-23046746)
chr2 (138-177)||(23047921-23047960)
chr2 (137-192)||(30958683-30958738)
chr2 (143-190)||(44999435-44999481)
chr2 (138-192)||(33290371-33290425)
chr2 (136-177)||(17463090-17463131)
chr2 (203-236)||(20499024-20499057)
chr2 (136-177)||(39878412-39878452)
chr2 (1-85)||(12376083-12376165)
chr2 (1-85)||(12389910-12389992)
chr2 (136-192)||(13284737-13284793)
chr2 (2-85)||(19883375-19883459)
chr2 (138-190)||(30959997-30960049)
[»] scaffold0473 (1 HSPs)
scaffold0473 (1-124)||(7397-7520)
[»] chr1 (51 HSPs)
chr1 (1-85)||(22838427-22838511)
chr1 (1-124)||(52100974-52101096)
chr1 (138-237)||(34749138-34749237)
chr1 (1-124)||(14819190-14819312)
chr1 (138-237)||(18462286-18462385)
chr1 (138-237)||(39711350-39711450)
chr1 (1-124)||(14803712-14803834)
chr1 (138-237)||(24467629-24467728)
chr1 (138-237)||(29696565-29696664)
chr1 (138-237)||(4906962-4907062)
chr1 (63-131)||(45498627-45498695)
chr1 (138-237)||(30299232-30299331)
chr1 (135-237)||(39711071-39711172)
chr1 (136-237)||(39826324-39826426)
chr1 (138-191)||(33628690-33628743)
chr1 (138-237)||(39826050-39826150)
chr1 (138-237)||(52058286-52058386)
chr1 (141-192)||(17606307-17606358)
chr1 (138-237)||(20995946-20996045)
chr1 (138-237)||(8293085-8293186)
chr1 (138-237)||(17606586-17606684)
chr1 (137-192)||(18342341-18342396)
chr1 (136-237)||(8292802-8292904)
chr1 (2-85)||(19368479-19368562)
chr1 (71-127)||(20312473-20312529)
chr1 (136-192)||(39970970-39971026)
chr1 (138-237)||(30252176-30252278)
chr1 (138-192)||(20995698-20995752)
chr1 (66-124)||(26198659-26198717)
chr1 (138-192)||(33629014-33629068)
chr1 (136-190)||(34749431-34749485)
chr1 (127-237)||(42510004-42510114)
chr1 (136-177)||(13230071-13230112)
chr1 (137-233)||(48071960-48072057)
chr1 (1-85)||(2415670-2415753)
chr1 (138-237)||(4907240-4907340)
chr1 (71-127)||(18703321-18703377)
chr1 (137-177)||(52058010-52058050)
chr1 (138-177)||(27039638-27039677)
chr1 (138-177)||(39970645-39970684)
chr1 (76-127)||(49934048-49934099)
chr1 (203-237)||(17606374-17606408)
chr1 (203-237)||(24467905-24467939)
chr1 (136-237)||(30299509-30299611)
chr1 (204-237)||(48072239-48072272)
chr1 (3-114)||(13187347-13187455)
chr1 (44-88)||(20519844-20519887)
chr1 (1-49)||(26198615-26198663)
chr1 (1-124)||(39455970-39456092)
chr1 (2-85)||(44319328-44319412)
chr1 (138-190)||(48072287-48072339)
[»] chr6 (28 HSPs)
chr6 (1-124)||(26980828-26980950)
chr6 (1-124)||(27073218-27073340)
chr6 (138-237)||(18500315-18500414)
chr6 (138-237)||(32017782-32017881)
chr6 (137-237)||(9481181-9481282)
chr6 (137-237)||(26385277-26385378)
chr6 (138-233)||(30617967-30618058)
chr6 (141-192)||(26385598-26385649)
chr6 (23-85)||(1551167-1551228)
chr6 (138-192)||(24731935-24731989)
chr6 (138-190)||(18500655-18500707)
chr6 (138-237)||(24732216-24732315)
chr6 (26-127)||(18869153-18869256)
chr6 (143-237)||(9154884-9154980)
chr6 (142-192)||(10321737-10321787)
chr6 (2-85)||(18910130-18910214)
chr6 (71-127)||(27643383-27643439)
chr6 (71-127)||(30116202-30116258)
chr6 (138-177)||(2299652-2299691)
chr6 (139-177)||(19284130-19284168)
chr6 (203-237)||(19284195-19284229)
chr6 (203-237)||(33714553-33714587)
chr6 (2-133)||(8277005-8277134)
chr6 (204-237)||(9854165-9854198)
chr6 (25-85)||(3916520-3916579)
chr6 (1-85)||(30435694-30435776)
chr6 (141-177)||(30458903-30458939)
chr6 (149-177)||(33714494-33714522)
[»] chr7 (59 HSPs)
chr7 (1-124)||(827374-827497)
chr7 (1-124)||(829385-829508)
chr7 (1-124)||(839185-839308)
chr7 (1-124)||(1204365-1204488)
chr7 (1-124)||(8955050-8955174)
chr7 (138-237)||(23383778-23383878)
chr7 (138-237)||(23704939-23705038)
chr7 (133-237)||(20419531-20419636)
chr7 (1-124)||(846361-846484)
chr7 (1-124)||(853738-853861)
chr7 (1-124)||(1211742-1211865)
chr7 (3-86)||(5647505-5647586)
chr7 (138-237)||(12006541-12006640)
chr7 (138-237)||(25772364-25772463)
chr7 (136-190)||(24195198-24195252)
chr7 (138-237)||(28218441-28218541)
chr7 (136-237)||(38879721-38879824)
chr7 (138-237)||(28218178-28218279)
chr7 (136-237)||(16995198-16995299)
chr7 (138-237)||(12006818-12006918)
chr7 (138-237)||(41600236-41600336)
chr7 (138-237)||(10409652-10409751)
chr7 (138-237)||(23704662-23704761)
chr7 (136-242)||(41599956-41600063)
chr7 (126-229)||(48648250-48648353)
chr7 (23-85)||(15765147-15765208)
chr7 (134-237)||(20419814-20419919)
chr7 (138-236)||(20963773-20963871)
chr7 (138-237)||(48672557-48672657)
chr7 (137-237)||(23383498-23383600)
chr7 (31-85)||(4850962-4851016)
chr7 (137-237)||(38880002-38880100)
chr7 (71-127)||(16280875-16280931)
chr7 (71-127)||(16295077-16295133)
chr7 (138-237)||(20458692-20458791)
chr7 (138-177)||(20459029-20459068)
chr7 (138-177)||(33162875-33162914)
chr7 (138-177)||(48672277-48672316)
chr7 (139-177)||(7658304-7658342)
chr7 (140-194)||(48648549-48648603)
chr7 (71-124)||(12585361-12585414)
chr7 (71-124)||(12595135-12595188)
chr7 (1-78)||(35076816-35076893)
chr7 (1-78)||(35091339-35091416)
chr7 (141-177)||(7657972-7658008)
chr7 (138-237)||(25772609-25772709)
chr7 (137-192)||(6465854-6465909)
chr7 (2-57)||(20541870-20541925)
chr7 (206-237)||(31851517-31851548)
chr7 (138-177)||(31852169-31852208)
chr7 (203-237)||(1250484-1250518)
chr7 (71-117)||(4889633-4889679)
chr7 (66-124)||(7342319-7342377)
chr7 (138-192)||(20963494-20963548)
chr7 (203-237)||(24195074-24195108)
chr7 (32-124)||(8811450-8811542)
chr7 (32-124)||(8819264-8819356)
chr7 (139-188)||(31851242-31851291)
chr7 (139-177)||(44816832-44816872)
[»] chr5 (44 HSPs)
chr5 (138-237)||(14143902-14144001)
chr5 (1-124)||(26870058-26870180)
chr5 (1-83)||(15778149-15778230)
chr5 (1-83)||(15792384-15792465)
chr5 (1-124)||(21826450-21826567)
chr5 (126-237)||(23979179-23979291)
chr5 (138-237)||(20709490-20709589)
chr5 (143-237)||(7125923-7126017)
chr5 (135-237)||(18336464-18336568)
chr5 (138-237)||(24837169-24837269)
chr5 (138-237)||(24837447-24837547)
chr5 (138-237)||(17762283-17762382)
chr5 (138-229)||(30512288-30512379)
chr5 (138-229)||(30552628-30552719)
chr5 (138-192)||(14411697-14411751)
chr5 (138-192)||(17762606-17762660)
chr5 (136-237)||(18336734-18336835)
chr5 (139-237)||(41001631-41001729)
chr5 (1-114)||(22958100-22958212)
chr5 (137-237)||(29444805-29444906)
chr5 (137-237)||(31799639-31799740)
chr5 (138-237)||(7126195-7126295)
chr5 (138-237)||(14144179-14144279)
chr5 (138-237)||(24074303-24074403)
chr5 (138-237)||(6817123-6817222)
chr5 (138-237)||(4918989-4919090)
chr5 (138-190)||(24651025-24651077)
chr5 (139-237)||(4919268-4919366)
chr5 (143-237)||(27159235-27159327)
chr5 (1-114)||(31512693-31512804)
chr5 (1-114)||(31526818-31526929)
chr5 (139-192)||(993751-993804)
chr5 (204-237)||(6817399-6817432)
chr5 (140-177)||(24650704-24650741)
chr5 (152-237)||(41001370-41001453)
chr5 (71-131)||(345487-345547)
chr5 (71-131)||(360126-360186)
chr5 (142-190)||(31799965-31800013)
chr5 (76-127)||(24060949-24061000)
chr5 (138-177)||(27158991-27159030)
chr5 (138-177)||(29445144-29445183)
chr5 (203-237)||(24074580-24074614)
chr5 (203-237)||(24650766-24650800)
chr5 (138-190)||(41425778-41425830)
[»] scaffold0001 (1 HSPs)
scaffold0001 (1-85)||(6584-6665)
[»] scaffold0155 (1 HSPs)
scaffold0155 (1-124)||(21901-22025)
[»] scaffold0361 (2 HSPs)
scaffold0361 (138-237)||(4841-4940)
scaffold0361 (138-192)||(4562-4616)
[»] scaffold0117 (1 HSPs)
scaffold0117 (143-237)||(12260-12355)
[»] scaffold0809 (2 HSPs)
scaffold0809 (138-237)||(1411-1510)
scaffold0809 (138-194)||(1728-1784)
[»] scaffold0449 (2 HSPs)
scaffold0449 (139-237)||(7227-7326)
scaffold0449 (138-237)||(7477-7578)
[»] scaffold0107 (1 HSPs)
scaffold0107 (23-85)||(1344-1405)
[»] scaffold0141 (1 HSPs)
scaffold0141 (138-191)||(8325-8378)
[»] scaffold0327 (1 HSPs)
scaffold0327 (1-41)||(2001-2041)
[»] scaffold0185 (1 HSPs)
scaffold0185 (138-237)||(3869-3969)
[»] scaffold0048 (1 HSPs)
scaffold0048 (1-57)||(3574-3629)
[»] scaffold0352 (2 HSPs)
scaffold0352 (138-192)||(6003-6057)
scaffold0352 (138-194)||(4667-4723)
[»] scaffold0034 (1 HSPs)
scaffold0034 (37-123)||(117749-117834)
[»] scaffold0551 (1 HSPs)
scaffold0551 (63-124)||(6423-6483)
[»] scaffold0014 (2 HSPs)
scaffold0014 (71-127)||(177630-177686)
scaffold0014 (71-127)||(187128-187184)
[»] scaffold0016 (1 HSPs)
scaffold0016 (71-125)||(56909-56963)
[»] scaffold1910 (1 HSPs)
scaffold1910 (2-86)||(89-173)
[»] scaffold0956 (1 HSPs)
scaffold0956 (1-117)||(213-327)
[»] scaffold0586 (1 HSPs)
scaffold0586 (137-185)||(5865-5913)
[»] scaffold0477 (1 HSPs)
scaffold0477 (138-190)||(4880-4932)
[»] scaffold0098 (1 HSPs)
scaffold0098 (71-127)||(28497-28553)
[»] scaffold0176 (2 HSPs)
scaffold0176 (138-177)||(15967-16006)
scaffold0176 (208-236)||(15911-15939)
[»] scaffold0064 (1 HSPs)
scaffold0064 (1-114)||(7685-7796)
[»] scaffold0357 (1 HSPs)
scaffold0357 (1-55)||(4128-4182)
[»] scaffold0075 (1 HSPs)
scaffold0075 (1-85)||(57434-57517)
[»] scaffold0037 (1 HSPs)
scaffold0037 (1-114)||(77234-77344)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-57)||(743-800)
[»] scaffold0002 (1 HSPs)
scaffold0002 (45-133)||(298268-298356)
[»] scaffold0799 (1 HSPs)
scaffold0799 (2-85)||(5806-5890)
[»] scaffold0503 (2 HSPs)
scaffold0503 (1-124)||(234-357)
scaffold0503 (1-124)||(4801-4924)
[»] scaffold0458 (1 HSPs)
scaffold0458 (1-124)||(7625-7747)
[»] scaffold0306 (1 HSPs)
scaffold0306 (1-85)||(16698-16781)
[»] scaffold0023 (2 HSPs)
scaffold0023 (1-57)||(136770-136825)
scaffold0023 (1-57)||(145732-145788)


Alignment Details
Target: chr8 (Bit Score: 80; Significance: 1e-37; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 20734915 - 20734828
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaagac 88  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  20734915 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattaatgtttgatttaagaaaataaaataaaaagac 20734828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 20743473 - 20743386
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaagac 88  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  20743473 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattaatgtttgatttaagaaaataaaataaaaagac 20743386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 20727003 - 20726918
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaag 86  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||    
T  20727003 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattaatgtttgatttaagacaataaaataaaaag 20726918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 20739901 - 20739816
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaag 86  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||    
T  20739901 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattaatgtttgatttaagacaataaaataaaaag 20739816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 6032302 - 6032218
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaa 85  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||| |||||||||||||||||||||||    
T  6032302 tgtttgtgttttttaatttaaatgaaaatagactcaaagtaaaattaaattgattaatgtttgatttaagaaaataaaataaaaa 6032218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 133 - 237
Target Start/End: Original strand, 14820290 - 14820394
Alignment:
Q  133 ttattgggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaatttcatat 232  Q
    |||||||||||||||||||||||||||||||||||||||||||||  | ||||||| ||| |        ||||||||||||||||||||||||||||||    
T  14820290 ttattgggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagttcctgtaaaaaaaagatttagattttgtccctgtaatttcatat 14820389  T
Q  233 tcttc 237  Q
    |||||    
T  14820390 tcttc 14820394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 137 - 237
Target Start/End: Original strand, 43851664 - 43851764
Alignment:
Q  137 tgggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaatttcatattctt 236  Q
    |||||||||||||||||||||||||||||||||||||||||  | ||||||||||| |        ||||||||||||||||||||||||||| ||||||    
T  43851664 tgggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaacaaaagatttagattttgtccctgtaatttcagattctt 43851763  T
Q  237 c 237  Q
    |    
T  43851764 c 43851764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 138 - 237
Target Start/End: Original strand, 10108370 - 10108470
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat-nnnnnnnngatttagattttgtccctgtaatttcatattctt 236  Q
    ||||||||||||||||||||||||||||||||||||||||  | ||||||||||| |         ||||||||||||||||||||||||||||||||||    
T  10108370 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 10108469  T
Q  237 c 237  Q
    |    
T  10108470 c 10108470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 7 - 86
Target Start/End: Original strand, 21473728 - 21473806
Alignment:
Q  7 tgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaag 86  Q
    ||||||||||||||||||||||||||||| ||||| | |||||||||||||| || || |||||||||||||||||||||    
T  21473728 tgttttttaatttaaatgaaaatagactcaaagtatagttaaattgattgatatttga-ttaagaaaataaaataaaaag 21473806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 138 - 237
Target Start/End: Original strand, 5554869 - 5554969
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat-nnnnnnnngatttagattttgtccctgtaatttcatattctt 236  Q
    ||||||||||||||||||||||||||||||||||||||||  | ||||||||||| |         |||| ||||||||||||| |||||||||||||||    
T  5554869 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagattcagattttgtccctataatttcatattctt 5554968  T
Q  237 c 237  Q
    |    
T  5554969 c 5554969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 138 - 190
Target Start/End: Complemental strand, 7689901 - 7689849
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtcc 190  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  7689901 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttagtcc 7689849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 10108748 - 10108648
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnn-gatttagattttgtccctgtaatttcatattctt 236  Q
    |||| |||||||||||||||||||||||||||||| ||||  | ||||||||||| |         ||||||||||||||||||||||||||||||||||    
T  10108748 gggttaatacctcttttcgtccctgtaatattagcaaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 10108649  T
Q  237 c 237  Q
    |    
T  10108648 c 10108648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 14820672 - 14820572
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnn-gatttagattttgtccctgtaatttcatattctt 236  Q
    |||| |||||||||||| ||||||||||||||||||||||  | ||||||||||| |         ||||||||||||||||||||||||||||||||||    
T  14820672 gggttaatacctcttttagtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 14820573  T
Q  237 c 237  Q
    |    
T  14820572 c 14820572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 23640699 - 23640807
Alignment:
Q  1 tgtttgtgttttttaat-ttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaagacagtcgctttat 99  Q
    ||||||||||||||||| || || |||||| |||||    || ||||||||||||||||||| ||||||| ||||||||||||||||||  || ||| ||    
T  23640699 tgtttgtgttttttaatattgaaagaaaatggactcatgataaaattaaattgattgatgtttgatttaaaaaaataaaataaaaagacgatcacttgat 23640798  T
Q  100 ttaagatca 108  Q
    |||||||||    
T  23640799 ttaagatca 23640807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 136 - 190
Target Start/End: Complemental strand, 18044207 - 18044153
Alignment:
Q  136 ttgggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtcc 190  Q
    ||||||||||||||||||||||||||||||||||||||||||  | |||||||||    
T  18044207 ttgggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtcc 18044153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 146 - 236
Target Start/End: Original strand, 42112993 - 42113083
Alignment:
Q  146 acctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaatttcatattctt 236  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||| |        |||||||||| |||||||||||||| | ||||||    
T  42112993 acctcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaaagatttagattatgtccctgtaatttaagattctt 42113083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 234
Target Start/End: Original strand, 30789519 - 30789604
Alignment:
Q  149 tcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaatttcatattc 234  Q
    |||||||||||||||||||||||||||||  ||||||||||||| |        ||||||||||||||| ||||||||||| ||||    
T  30789519 tcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaaagatttagattttgtctctgtaatttcagattc 30789604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 237
Target Start/End: Complemental strand, 5555239 - 5555147
Alignment:
Q  146 acctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnn-gatttagattttgtccctgtaatttcatattcttc 237  Q
    ||||||||||||||||||||||||||||||||  | |||||||| || |         |||||||||||||||||||||||||||||||||||    
T  5555239 acctcttttcgtccctgtaatattagcgaatttcggttttagtctctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttc 5555147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 131
Target Start/End: Original strand, 14336349 - 14336409
Alignment:
Q  71 aaaataaaataaaaagacagtcgctttatttaagatcacggtttattgtaaaaagtttttt 131  Q
    |||||||||||||||||| ||| ||| ||||||||||| |||||||||| |||||||||||    
T  14336349 aaaataaaataaaaagacggtcacttgatttaagatcaaggtttattgtgaaaagtttttt 14336409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 17623261 - 17623165
Alignment:
Q  141 taaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaatttcatattcttc 237  Q
    ||||||||||||||| |||||||||||||||| |||| || ||||||| ||| |        |||||||||||||||| |||||||||| |||||||    
T  17623261 taaatacctcttttcatccctgtaatattagccaattctggttttagtgcctgtaaaaaaaagatttagattttgtccttgtaatttcaaattcttc 17623165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 30789885 - 30789785
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat-nnnnnnnngatttagattttgtccctgtaatttcatattctt 236  Q
    ||||||||||||||||||||||||||||||||||  ||||  | ||||||||||| |         ||||||||||||||||||||||||||| ||||||    
T  30789885 gggtaaatacctcttttcgtccctgtaatattagtaaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattctt 30789786  T
Q  237 c 237  Q
    |    
T  30789785 c 30789785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 138 - 177
Target Start/End: Original strand, 7689524 - 7689563
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaatt 177  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  7689524 gggtaaatacctcttttcgtccctgtaatattagcgaatt 7689563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 138 - 192
Target Start/End: Complemental strand, 10171521 - 10171467
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccct 192  Q
    ||||||||||| ||||||||||||||||||||||||||||  | |||||||||||    
T  10171521 gggtaaataccgcttttcgtccctgtaatattagcgaattccggttttagtccct 10171467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 138 - 237
Target Start/End: Original strand, 21147936 - 21148037
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccc--tatnnnnnnnngatttagattttgtccctgtaatttcatattct 235  Q
    |||| |||||||||||| ||||||||||||||||||||||  | ||||||||||  ||         ||||||||||||||||||||||||||| |||||    
T  21147936 gggttaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattct 21148035  T
Q  236 tc 237  Q
    ||    
T  21148036 tc 21148037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 23266480 - 23266590
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaagacagtcgctttatt 100  Q
    |||||||||||||||  ||||| ||||   ||||| ||||| |||||||||||||||| || |||| ||||||||||||||||| |||  |||||| |||    
T  23266480 tgtttgtgtttttta--ttaaaagaaagatgactcaaagtataattaaattgattgatatttgatt-aagaaaataaaataaaaggacgatcgcttgatt 23266576  T
Q  101 taagatcacggttt 114  Q
    || ||||| |||||    
T  23266577 taggatcaaggttt 23266590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 123
Target Start/End: Original strand, 22103958 - 22104015
Alignment:
Q  66 ttaagaaaataaaataaaaagacagtcgctttatttaagatcacggtttattgtaaaa 123  Q
    |||| |||||||||||||||||| ||| ||| ||||||||||| ||||||||||||||    
T  22103958 ttaaaaaaataaaataaaaagacggtcacttgatttaagatcaaggtttattgtaaaa 22104015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 2583318 - 2583370
Alignment:
Q  136 ttgggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagt 188  Q
    |||||||||||||||||||| | |||||||||||||||||||  |||||||||    
T  2583318 ttgggtaaatacctcttttcattcctgtaatattagcgaatttcgattttagt 2583370  T

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Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 137 - 237
Target Start/End: Complemental strand, 14767883 - 14767785
Alignment:
Q  137 tgggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaatttcatattctt 236  Q
    ||||||||||||||||||||| |||||||||||||  ||||  | ||||||||||| |         | |||||||||||||||||||||||||||||||    
T  14767883 tgggtaaatacctcttttcgttcctgtaatattagtaaatttcgtttttagtccctgtaaaaaaa--aattagattttgtccctgtaatttcatattctt 14767786  T

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Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 127
Target Start/End: Original strand, 23601467 - 23601523
Alignment:
Q  71 aaaataaaataaaaagacagtcgctttatttaagatcacggtttattgtaaaaagtt 127  Q
    |||||||||||||||||| ||| ||| ||||||||||| |||||||||| |||||||    
T  23601467 aaaataaaataaaaagacggtcacttgatttaagatcaaggtttattgtgaaaagtt 23601523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 85
Target Start/End: Complemental strand, 13387023 - 13386941
Alignment:
Q  2 gtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaa 85  Q
    |||||| ||||||||||| || |||||||||||| | ||| ||||||||||||| | | | || ||||||||||||||||||||    
T  13387023 gtttgtcttttttaatttgaaagaaaatagactcaaggtataattaaattgattaaagcttga-ttaagaaaataaaataaaaa 13386941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 177
Target Start/End: Original strand, 17622890 - 17622929
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaatt 177  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  17622890 gggtaaatacctcttttcgtccttgtaatattagcgaatt 17622929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 26137062 - 26136963
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaatttcatattcttc 237  Q
    ||||||||||| |||||||||||||||||||||| |||||    ||||||||||||          | |||||||||||||||||||||||| |||||||    
T  26137062 gggtaaataccacttttcgtccctgtaatattagtgaatttcagttttagtccctagtaaaaaaaaaattagattttgtccctgtaatttcagattcttc 26136963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 189
Target Start/End: Complemental strand, 42606131 - 42606080
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtc 189  Q
    ||||||||| ||||||| |||||||||||||||||||||| || ||||||||    
T  42606131 gggtaaatatctctttttgtccctgtaatattagcgaattctggttttagtc 42606080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 138 - 229
Target Start/End: Original strand, 14767506 - 14767599
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccc--tatnnnnnnnngatttagattttgtccctgtaatttca 229  Q
    |||| ||||||||||||| || |||||||||||||||||| || ||||||||||  ||         |||||||||||||||||||||||||||    
T  14767506 gggttaatacctcttttcatctctgtaatattagcgaattttggttttagtcccaataaaaaaaaaagatttagattttgtccctgtaatttca 14767599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 138 - 192
Target Start/End: Complemental strand, 21148314 - 21148260
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccct 192  Q
    ||||||||||||||||||||| |||||||||||| |||||  | |||||||||||    
T  21148314 gggtaaatacctcttttcgtctctgtaatattagtgaattccggttttagtccct 21148260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 114
Target Start/End: Original strand, 32024574 - 32024677
Alignment:
Q  9 ttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaagacagtcgctttatttaagatca 108  Q
    |||||||||||||| |||||| ||||| || ||  ||||||||| || | ||| || |||||||||||||||||||| || ||| ||| |||||||||||    
T  32024574 ttttttaatttaaaagaaaatggactcaaaatatgattaaattggttaaagtttga-ttaagaaaataaaataaaaa-acggtcacttgatttaagatca 32024671  T
Q  109 cggttt 114  Q
     |||||    
T  32024672 aggttt 32024677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 127
Target Start/End: Complemental strand, 15831795 - 15831739
Alignment:
Q  71 aaaataaaataaaaagacagtcgctttatttaagatcacggtttattgtaaaaagtt 127  Q
    |||||||||||||||||| ||| ||| ||||||||||| ||||| |||| |||||||    
T  15831795 aaaataaaataaaaagacggtcacttgatttaagatcaaggttttttgtgaaaagtt 15831739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 194
Target Start/End: Complemental strand, 20877123 - 20877067
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat 194  Q
    |||| |||||||||||| ||||||||||||| ||||||||  | |||||||||||||    
T  20877123 gggttaatacctcttttggtccctgtaatatgagcgaattccggttttagtccctat 20877067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 177
Target Start/End: Original strand, 26136685 - 26136724
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaatt 177  Q
    |||| ||||||||||||||| |||||||||||||||||||    
T  26136685 gggtgaatacctcttttcgttcctgtaatattagcgaatt 26136724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 177
Target Start/End: Original strand, 35367410 - 35367449
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaatt 177  Q
    ||||||||||||||||| ||||||| ||||||||||||||    
T  35367410 gggtaaatacctcttttggtccctgcaatattagcgaatt 35367449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 177
Target Start/End: Complemental strand, 42113359 - 42113320
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaatt 177  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  42113359 gggtaaatacatcttttcgtccctgtaatattaacgaatt 42113320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 177
Target Start/End: Complemental strand, 43481693 - 43481654
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaatt 177  Q
    ||||||||| ||||||||||| ||||||||||||||||||    
T  43481693 gggtaaatatctcttttcgtcactgtaatattagcgaatt 43481654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 125
Target Start/End: Complemental strand, 25644531 - 25644408
Alignment:
Q  3 tttgtgttttttaatttaaatgaaaatagactcgaagtagaatta-aattgatt-gatgttggatttaagaaa-ataaaataaaaagacagtcgctttat 99  Q
    |||||||||||||  || || |||||| |||| ||||| |||||| |||||||| || ||| |||| |||||| ||||||||||||||| ||| ||| ||    
T  25644531 tttgtgttttttagattgaa-gaaaattgacttgaagttgaattagaattgatttgaagtttgatt-aagaaagataaaataaaaagactgtcacttgat 25644434  T
Q  100 ttaagatcacggtttattgtaaaaag 125  Q
    ||||||||| ||||| |||| |||||    
T  25644433 ttaagatcaaggtttgttgtgaaaag 25644408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 127
Target Start/End: Original strand, 20026721 - 20026777
Alignment:
Q  71 aaaataaaataaaaagacagtcgctttatttaagatcacggtttattgtaaaaagtt 127  Q
    |||||||||||||||||| ||| |||  |||||||||| ||||| |||| |||||||    
T  20026721 aaaataaaataaaaagacggtcacttggtttaagatcaaggttttttgtgaaaagtt 20026777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 85
Target Start/End: Complemental strand, 32007835 - 32007776
Alignment:
Q  25 aaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaa 85  Q
    |||| ||||| |||||| | ||||||||||||| ||| |||| ||||||||||||||||||    
T  32007835 aaaagagacttgaagtaaagttaaattgattgaagtttgatt-aagaaaataaaataaaaa 32007776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 54650 - 54564
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaaga 87  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  54650 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattaatgtttgatttaagaaaataaaataaaaaga 54564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 25167 - 25045
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaagacagtcgctttatt 100  Q
    |||||||||||||||||||||| |||||| |||| ||||||||||||| ||||||||  || |||| ||||||||||||||||||||| ||| ||| |||    
T  25167 tgtttgtgttttttaatttaaaagaaaatggacttgaagtagaattaagttgattgaaatttgatt-aagaaaataaaataaaaagacggtcacttgatt 25069  T
Q  101 taagatcacggtttattgtaaaaa 124  Q
    |||||||| |||||||||||||||    
T  25068 taagatcaaggtttattgtaaaaa 25045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 72; Significance: 7e-33; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 64385 - 64507
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaagacagtcgctttatt 100  Q
    |||||||||||||||||||||| |||||| |||| ||||||||||||| ||||||||  || |||| ||||||||||||||||||||| ||| ||| |||    
T  64385 tgtttgtgttttttaatttaaaagaaaatggacttgaagtagaattaagttgattgaaatttgatt-aagaaaataaaataaaaagacggtcacttgatt 64483  T
Q  101 taagatcacggtttattgtaaaaa 124  Q
    |||||||| |||||||||||||||    
T  64484 taagatcaaggtttattgtaaaaa 64507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 80785 - 80906
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaagacagtcgctttatt 100  Q
    ||||||||| |||||||||||| |||||| || | ||||||||||||| ||||||||  || |||| ||||||||||||||||||||| ||| ||| |||    
T  80785 tgtttgtgtgttttaatttaaaagaaaatggatt-gaagtagaattaagttgattgaaatttgatt-aagaaaataaaataaaaagacggtcacttgatt 80882  T
Q  101 taagatcacggtttattgtaaaaa 124  Q
    |||||||| |||||||||||||||    
T  80883 taagatcaaggtttattgtaaaaa 80906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 7e-33; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 9185555 - 9185433
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaagacagtcgctttatt 100  Q
    |||||||||||||||||||||| |||||| |||| ||||||||||||| ||||||||  || |||| ||||||||||||||||||||| ||| ||| |||    
T  9185555 tgtttgtgttttttaatttaaaagaaaatggacttgaagtagaattaagttgattgaaatttgatt-aagaaaataaaataaaaagacggtcacttgatt 9185457  T
Q  101 taagatcacggtttattgtaaaaa 124  Q
    |||||||| |||||||||||||||    
T  9185456 taagatcaaggtttattgtaaaaa 9185433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 9191420 - 9191298
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaagacagtcgctttatt 100  Q
    |||||||||||||||||||||| |||||| |||| ||||||||||||| ||||||||  || |||| ||||||||||||||||||||| ||| ||| |||    
T  9191420 tgtttgtgttttttaatttaaaagaaaatggacttgaagtagaattaagttgattgaaatttgatt-aagaaaataaaataaaaagacggtcacttgatt 9191322  T
Q  101 taagatcacggtttattgtaaaaa 124  Q
    |||||||| |||||||||||||||    
T  9191321 taagatcaaggtttattgtaaaaa 9191298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 15566255 - 15566339
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaa 85  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||| |||||||||||||||||||||||    
T  15566255 tgtttgtgttttttaatttaaatgaaaatagactcaaagtaaaattaaattgattaatgtttgatttaagaaaataaaataaaaa 15566339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 15578902 - 15578986
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaa 85  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||| |||||||||||||||||||||||    
T  15578902 tgtttgtgttttttaatttaaatgaaaatagactcaaagtaaaattaaattgattaatgtttgatttaagaaaataaaataaaaa 15578986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 9186002 - 9185880
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaagacagtcgctttatt 100  Q
    |||||||||| ||||||||||| |||||| |||| ||||||||||||| ||||||||  || |||| ||||||||||||||||||||| ||| ||| |||    
T  9186002 tgtttgtgttctttaatttaaaagaaaatggacttgaagtagaattaagttgattgaaatttgatt-aagaaaataaaataaaaagacggtcacttgatt 9185904  T
Q  101 taagatcacggtttattgtaaaaa 124  Q
    |||||||| |||||||||||||||    
T  9185903 taagatcaaggtttattgtaaaaa 9185880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 20841134 - 20841217
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaa 85  Q
    |||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||| || ||||||||| ||||||||||    
T  20841134 tgtttgtgttttttaatttaaatgaaaataaactcaaggtagaattaaattgattgatgtttga-ttaagaaaagaaaataaaaa 20841217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 37013084 - 37012985
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaatttcatattcttc 237  Q
    ||||||||||||| |||||||||||||||||||||||||| || ||||||||||| |         | ||||||||||||||||||||||||||||||||    
T  37013084 gggtaaatacctcatttcgtccctgtaatattagcgaattctggttttagtccctgtataaaaaaaaattagattttgtccctgtaatttcatattcttc 37012985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 138 - 237
Target Start/End: Original strand, 38573969 - 38574068
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaatttcatattcttc 237  Q
    |||||||||||||||||||||| ||||||||||| |||||  ||||||| ||||| |        |||||||||||||||||||||||||||||||||||    
T  38573969 gggtaaatacctcttttcgtccatgtaatattagtgaattccgattttaatccctgtaaaaaaaagatttagattttgtccctgtaatttcatattcttc 38574068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 136 - 237
Target Start/End: Complemental strand, 3273998 - 3273898
Alignment:
Q  136 ttgggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaatttcatattct 235  Q
    ||||||||||||||||||||||||| ||||||||||||||||  | |||||||||||||        |||||||||||| |||||||||||||| |||||    
T  3273998 ttgggtaaatacctcttttcgtccc-gtaatattagcgaatttcggttttagtccctataaaaaaaagatttagattttatccctgtaatttcagattct 3273900  T
Q  236 tc 237  Q
    ||    
T  3273899 tc 3273898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 38574343 - 38574246
Alignment:
Q  141 taaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat-nnnnnnnngatttagattttgtccctgtaatttcatattcttc 237  Q
    ||||||||| ||||||||||||||||||||||||||| || ||||||||||| |         |||||||||||||||||||||||||||||||||||    
T  38574343 taaataccttttttcgtccctgtaatattagcgaattctggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcatattcttc 38574246  T

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Target: chr4; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 140 - 237
Target Start/End: Complemental strand, 48260126 - 48260029
Alignment:
Q  140 gtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaatttcatattcttc 237  Q
    ||||||| |||||||||||||||||||||||||||||| |||||||| || || |        ||||||||||||||||||||||||||| |||||||    
T  48260126 gtaaatatctcttttcgtccctgtaatattagcgaattttgattttaatctctgtaaaaaaaagatttagattttgtccctgtaatttcaaattcttc 48260029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 9619357 - 9619257
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat-nnnnnnnngatttagattttgtccctgtaatttcatattctt 236  Q
    ||||||||||||||||| |||||||||||||||||||||| || ||||||||||| |         |||||||||||||||| |||||||||||||||||    
T  9619357 gggtaaatacctctttttgtccctgtaatattagcgaattctggttttagtccctgtagaaaaaaagatttagattttgtccttgtaatttcatattctt 9619258  T
Q  237 c 237  Q
    |    
T  9619257 c 9619257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 136 - 236
Target Start/End: Original strand, 15640714 - 15640814
Alignment:
Q  136 ttgggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaatttcatattct 235  Q
    |||||| || ||||||||||||||||||||||||||||||||  | ||||||| ||| |        |||||||||||||||||||||||||||||||||    
T  15640714 ttgggttaacacctcttttcgtccctgtaatattagcgaattccggttttagttcctgtaaaaaaaagatttagattttgtccctgtaatttcatattct 15640813  T
Q  236 t 236  Q
    |    
T  15640814 t 15640814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 3018014 - 3018112
Alignment:
Q  141 taaatacctcttttcgtccctgtaatattagcgaattatgattttagtccc--tatnnnnnnnngatttagattttgtccctgtaatttcatattcttc 237  Q
    |||||||||||||||||||||||||||||||||||||  | ||||||||||  ||         |||||||||||||||||||||||||||||||||||    
T  3018014 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtcccggtaaaaaaaaaagatttagattttgtccctgtaatttcatattcttc 3018112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 9397076 - 9396977
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaatttcatattcttc 237  Q
    |||||||||| |||||||||||||||||||||||| ||||  | ||||||||||| |        ||||||||||||||||||||||||||| |||||||    
T  9397076 gggtaaatacttcttttcgtccctgtaatattagcaaattccggttttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcagattcttc 9396977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 13132317 - 13132219
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaatttcatattcttc 237  Q
    |||||||||||| |||||||||||||||||||||||||||  ||||||||| ||| |        |||||||||| ||||||||||||||||||||||||    
T  13132317 gggtaaatacctattttcgtccctgtaatattagcgaatttcgattttagt-cctgtaaaaaaaagatttagattctgtccctgtaatttcatattcttc 13132219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 139 - 237
Target Start/End: Original strand, 35376164 - 35376262
Alignment:
Q  139 ggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaatttcatattcttc 237  Q
    ||||||||||| ||||||||||||||||||||||||||| || ||||||||||| |        ||||||||||||||| ||||||||| | |||||||    
T  35376164 ggtaaatacctattttcgtccctgtaatattagcgaattctggttttagtccctgtaaaaaaaagatttagattttgtctctgtaattttagattcttc 35376262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 136 - 237
Target Start/End: Original strand, 31090058 - 31090161
Alignment:
Q  136 ttgggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccc--tatnnnnnnnngatttagattttgtccctgtaatttcatatt 233  Q
    |||||||||||| |||||| |||||||||||||||| |||||  ||||||||||||  ||         |||||||||||||||||||||||||||||||    
T  31090058 ttgggtaaatacttctttttgtccctgtaatattagtgaatttcgattttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcatatt 31090157  T
Q  234 cttc 237  Q
    ||||    
T  31090158 cttc 31090161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 135 - 237
Target Start/End: Complemental strand, 9516991 - 9516888
Alignment:
Q  135 attgggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat-nnnnnnnngatttagattttgtccctgtaatttcatatt 233  Q
    |||||||||||| ||||||||||||||||||||||||||||||  | |||||||| || |         ||||||||||||||||||||||||||| |||    
T  9516991 attgggtaaatatctcttttcgtccctgtaatattagcgaatttcggttttagtctctgtaaaaaaaaagatttagattttgtccctgtaatttcagatt 9516892  T
Q  234 cttc 237  Q
    ||||    
T  9516891 cttc 9516888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 138 - 237
Target Start/End: Original strand, 46046430 - 46046524
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaatttcatattcttc 237  Q
    |||||||||||| |||||||||||||||||||||||||||  ||||||||||||| |         |  |||||||||||||||||||||||||||||||    
T  46046430 gggtaaataccttttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaa-----aaatagattttgtccctgtaatttcatattcttc 46046524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 138 - 192
Target Start/End: Complemental strand, 31090439 - 31090385
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccct 192  Q
    ||||||||| ||||||||||||||||||||||||||||||  |||||||||||||    
T  31090439 gggtaaatatctcttttcgtccctgtaatattagcgaatttcgattttagtccct 31090385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 138 - 192
Target Start/End: Complemental strand, 31218359 - 31218305
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccct 192  Q
    ||||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  31218359 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccct 31218305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 44623656 - 44623544
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaata-aaaagacagtcgctttat 99  Q
    |||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||  || || ||||| |||||||||| |||||||  || ||| ||    
T  44623656 tgtttgtgttttttaatttaaatgaaaata-acttgaagtagaattaagttgattgaaatttga-ttaaggaaataaaatagaaaagactatcacttgat 44623559  T
Q  100 ttaagatcacggttt 114  Q
    ||| ||||| |||||    
T  44623558 ttaggatcaaggttt 44623544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 138 - 191
Target Start/End: Original strand, 3273621 - 3273674
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccc 191  Q
    ||||||||| ||||||||||||||||||||||||||||||  ||||||||||||    
T  3273621 gggtaaatatctcttttcgtccctgtaatattagcgaattccgattttagtccc 3273674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 137 - 237
Target Start/End: Complemental strand, 26252616 - 26252515
Alignment:
Q  137 tgggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat-nnnnnnnngatttagattttgtccctgtaatttcatattct 235  Q
    |||||||||| ||||||||||||||||||||||||||||||    ||||||| ||| |         |||||||||||||||||||||||||||||||||    
T  26252616 tgggtaaatatctcttttcgtccctgtaatattagcgaattccagttttagttcctgtaaaaaaaaagatttagattttgtccctgtaatttcatattct 26252517  T
Q  236 tc 237  Q
    ||    
T  26252516 tc 26252515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 189
Target Start/End: Original strand, 9396702 - 9396750
Alignment:
Q  141 taaatacctcttttcgtccctgtaatattagcgaattatgattttagtc 189  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||    
T  9396702 taaatacctcttttcgtccctgtaatattagcgaatttcgattttagtc 9396750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 117
Target Start/End: Original strand, 23994978 - 23995070
Alignment:
Q  25 aaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaat--aaaaagacagtcgctttatttaagatcacggtttatt 117  Q
    |||| |||||| ||||||||||||||||||  ||||| ||||||||||||||||||  |||||||| ||| ||| ||||| ||||| ||||||||    
T  23994978 aaaaaagactcaaagtagaattaaattgat--atgtttgatttaagaaaataaaataaaaaaagacggtcacttgatttaggatcaaggtttatt 23995070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 46046801 - 46046702
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat-nnnnnnnngatttagattttgtccctgtaatttcatattctt 236  Q
    |||||||||||| |||||||||||||||||||||||||||  | ||||||||||| |         ||||||||||||||||||||||||||| ||||||    
T  46046801 gggtaaatacct-ttttcgtccctgtaatattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattctt 46046703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 139 - 237
Target Start/End: Original strand, 9516611 - 9516710
Alignment:
Q  139 ggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat-nnnnnnnngatttagattttgtccctgtaatttcatattcttc 237  Q
    |||||||| ||||||||||||||||||||||||||||||  | ||||||||| | |         |||||||||||||||| ||||||||||||||||||    
T  9516611 ggtaaatatctcttttcgtccctgtaatattagcgaattccggttttagtccttgtaaaaaaaaagatttagattttgtccttgtaatttcatattcttc 9516710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 138 - 237
Target Start/End: Original strand, 12904747 - 12904846
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaatttcatattcttc 237  Q
    ||||||||| |||||||||||||| ||||||||||||||| || ||||||||||| |         ||||||||||||||| | |||||||| |||||||    
T  12904747 gggtaaatatctcttttcgtccctataatattagcgaattttggttttagtccctgtaaaaaaaaaatttagattttgtccttataatttcagattcttc 12904846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 139 - 237
Target Start/End: Original strand, 34063983 - 34064082
Alignment:
Q  139 ggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat-nnnnnnnngatttagattttgtccctgtaatttcatattcttc 237  Q
    |||||||||||||||||||||||||||||||| |||||| |  ||||||||||| |         ||||||||||||||| ||||||||||| |||||||    
T  34063983 ggtaaatacctcttttcgtccctgtaatattaacgaattctagttttagtccctgtaaaaaaaaagatttagattttgtctctgtaatttcagattcttc 34064082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 237
Target Start/End: Original strand, 9618982 - 9619080
Alignment:
Q  140 gtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat-nnnnnnnngatttagattttgtccctgtaatttcatattcttc 237  Q
    |||||||||| ||||||||| |||||||||||||||||  | ||||||||||| |         ||||||||||||||||||||||||||| |||||||    
T  9618982 gtaaatacctattttcgtccatgtaatattagcgaattccggttttagtccctgtaaaaacaaagatttagattttgtccctgtaatttcagattcttc 9619080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 138 - 237
Target Start/End: Original strand, 31943950 - 31944050
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnn--gatttagattttgtccctgtaatttcatattct 235  Q
    |||||||||| |||||||||||||||||||||||||||||  | ||||||| ||| |          |||||||||||||||||||||||||||||||||    
T  31943950 gggtaaatac-tcttttcgtccctgtaatattagcgaattccggttttagttcctgtaaataaaaaagatttagattttgtccctgtaatttcatattct 31944048  T
Q  236 tc 237  Q
    ||    
T  31944049 tc 31944050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 138 - 192
Target Start/End: Original strand, 36887680 - 36887734
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccct 192  Q
    |||| |||||||||||| |||||||||||||||||||||| || |||||||||||    
T  36887680 gggttaatacctcttttggtccctgtaatattagcgaattttggttttagtccct 36887734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 138 - 192
Target Start/End: Original strand, 41946965 - 41947019
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccct 192  Q
    |||||||||||||||||||||||||||||||||| |||||  | |||||||||||    
T  41946965 gggtaaatacctcttttcgtccctgtaatattagtgaattccggttttagtccct 41947019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 190
Target Start/End: Complemental strand, 41947234 - 41947180
Alignment:
Q  136 ttgggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtcc 190  Q
    ||||||||||| ||||||||||||||||||||||||||||||  | |||||||||    
T  41947234 ttgggtaaatatctcttttcgtccctgtaatattagcgaatttcggttttagtcc 41947180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 177
Target Start/End: Complemental strand, 18667668 - 18667629
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaatt 177  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  18667668 gggttaatacctcttttcgtccctgtaatattagcgaatt 18667629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 237
Target Start/End: Original strand, 37012712 - 37012807
Alignment:
Q  143 aatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat-nnnnnnnngatttagattttgtccctgtaatttcatattcttc 237  Q
    ||||||||||||||||| ||||||||||||||||| | |||| ||||| | |         ||||||||||||||||||||||||||| |||||||    
T  37012712 aatacctcttttcgtccttgtaatattagcgaattctaatttcagtccttgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttc 37012807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 177
Target Start/End: Original strand, 48259823 - 48259862
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaatt 177  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  48259823 gggtaaatatctcttttcgtccctgtaatattagcgaatt 48259862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 233
Target Start/End: Complemental strand, 48580239 - 48580148
Alignment:
Q  143 aatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat-nnnnnnnngatttagattttgtccctgtaatttcatatt 233  Q
    |||||||||||||||||||||||||||||||||||  | ||||| |||  ||         |||||||||||||||||||||||||||||||    
T  48580239 aatacctcttttcgtccctgtaatattagcgaattccggttttaatcctgataaaaaaaacgatttagattttgtccctgtaatttcatatt 48580148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 71 - 125
Target Start/End: Original strand, 736816 - 736870
Alignment:
Q  71 aaaataaaataaaaagacagtcgctttatttaagatcacggtttattgtaaaaag 125  Q
    |||||||||||||||||| ||| ||| ||||||||||| |||||||||| |||||    
T  736816 aaaataaaataaaaagacggtcacttgatttaagatcaaggtttattgtgaaaag 736870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 66 - 127
Target Start/End: Original strand, 3396610 - 3396672
Alignment:
Q  66 ttaagaaaa-taaaataaaaagacagtcgctttatttaagatcacggtttattgtaaaaagtt 127  Q
    ||||||||| |||||||||||||| ||| ||| ||||||||||| |||||||||| |||||||    
T  3396610 ttaagaaaactaaaataaaaagacggtcacttgatttaagatcaaggtttattgtgaaaagtt 3396672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 138 - 192
Target Start/End: Complemental strand, 12904962 - 12904908
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccct 192  Q
    |||||||||| |||||||||   ||||||||||||||||| ||||||||||||||    
T  12904962 gggtaaatacatcttttcgtttatgtaatattagcgaattttgattttagtccct 12904908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 127
Target Start/End: Original strand, 22140426 - 22140482
Alignment:
Q  71 aaaataaaataaaaagacagtcgctttatttaagatcacggtttattgtaaaaagtt 127  Q
    |||||||||||| ||||| ||| ||| ||||||||||| |||||||||| |||||||    
T  22140426 aaaataaaataagaagacggtcacttgatttaagatcaaggtttattgtgaaaagtt 22140482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 127
Target Start/End: Original strand, 22152340 - 22152396
Alignment:
Q  71 aaaataaaataaaaagacagtcgctttatttaagatcacggtttattgtaaaaagtt 127  Q
    |||||||||||| ||||| ||| ||| ||||||||||| |||||||||| |||||||    
T  22152340 aaaataaaataagaagacggtcacttgatttaagatcaaggtttattgtgaaaagtt 22152396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 229
Target Start/End: Complemental strand, 35376502 - 35376414
Alignment:
Q  141 taaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaatttca 229  Q
    |||||| ||||||||||||||||||||||||| ||||    ||||||||||| |        |||||| ||||||||||||||||||||    
T  35376502 taaatatctcttttcgtccctgtaatattagcaaattccagttttagtccctgtaaaaaaaagatttaaattttgtccctgtaatttca 35376414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 192
Target Start/End: Complemental strand, 43313591 - 43313535
Alignment:
Q  136 ttgggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccct 192  Q
    |||||| |||||| ||||| ||| |||||||||||||||||| || |||||||||||    
T  43313591 ttgggttaataccacttttggtctctgtaatattagcgaattctggttttagtccct 43313535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 7945819 - 7945740
Alignment:
Q  3 tttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaa 85  Q
    |||||||||||||  ||||| ||||   |||||||||||  ||||||||||||||| || | |||||||||||||||||||||    
T  7945819 tttgtgtttttta--ttaaaagaaagatgactcgaagtatgattaaattgattgatatttg-tttaagaaaataaaataaaaa 7945740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 177
Target Start/End: Original strand, 13131936 - 13131979
Alignment:
Q  134 tattgggtaaatacctcttttcgtccctgtaatattagcgaatt 177  Q
    |||||| ||||||||||||||||||| |||||||||| ||||||    
T  13131936 tattggctaaatacctcttttcgtccttgtaatattaacgaatt 13131979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 26034410 - 26034491
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaa 84  Q
    |||||||||||||||  ||||| ||||| |||||| ||||| ||||||||||||| || || || ||||||||| |||||||||    
T  26034410 tgtttgtgttttttatattaaaagaaaagagactcaaagtaaaattaaattgattaatatttga-ttaagaaaa-aaaataaaa 26034491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 177
Target Start/End: Complemental strand, 31944328 - 31944289
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaatt 177  Q
    |||||||||| ||||||||||| |||||||||||||||||    
T  31944328 gggtaaatacttcttttcgtccttgtaatattagcgaatt 31944289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 177
Target Start/End: Complemental strand, 50462774 - 50462735
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaatt 177  Q
    |||| |||||||||||| ||||||||||||||||||||||    
T  50462774 gggttaatacctcttttggtccctgtaatattagcgaatt 50462735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 192
Target Start/End: Complemental strand, 3018388 - 3018334
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccct 192  Q
    |||| |||| ||||||||||||||||||||||| ||||||  | |||||||||||    
T  3018388 gggttaatatctcttttcgtccctgtaatattaacgaatttcggttttagtccct 3018334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 237
Target Start/End: Original strand, 3273692 - 3273722
Alignment:
Q  207 tagattttgtccctgtaatttcatattcttc 237  Q
    |||||||||||||||||||||||||||||||    
T  3273692 tagattttgtccctgtaatttcatattcttc 3273722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 177
Target Start/End: Complemental strand, 4356253 - 4356219
Alignment:
Q  143 aatacctcttttcgtccctgtaatattagcgaatt 177  Q
    ||||||||||||| |||||||||||||||||||||    
T  4356253 aatacctcttttcatccctgtaatattagcgaatt 4356219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Original strand, 7819080 - 7819114
Alignment:
Q  203 gatttagattttgtccctgtaatttcatattcttc 237  Q
    ||||||||||||||||||||||||||| |||||||    
T  7819080 gatttagattttgtccctgtaatttcagattcttc 7819114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 14899402 - 14899348
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgatt 55  Q
    |||||||||||||||  ||||| ||||| |||||| ||||| |||||||||||||    
T  14899402 tgtttgtgttttttatattaaaagaaaagagactcaaagtaaaattaaattgatt 14899348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 177
Target Start/End: Complemental strand, 15641093 - 15641055
Alignment:
Q  139 ggtaaatacctcttttcgtccctgtaatattagcgaatt 177  Q
    ||||||||||||||||||||| ||||||||||| |||||    
T  15641093 ggtaaatacctcttttcgtccttgtaatattagtgaatt 15641055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 233
Target Start/End: Original strand, 18713026 - 18713056
Alignment:
Q  203 gatttagattttgtccctgtaatttcatatt 233  Q
    |||||||||||||||||||||||||||||||    
T  18713026 gatttagattttgtccctgtaatttcatatt 18713056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 50188835 - 50188753
Alignment:
Q  1 tgtttgtgttttttaat-ttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaa 85  Q
    ||||||||||||| ||| |||||  ||||||||||  ||||| | ||||||||||||| ||| |||| ||||||||||||||||||    
T  50188835 tgtttgtgtttttaaatattaaa--aaaatagacttaaagtaaagttaaattgattgaagtttgatt-aagaaaataaaataaaaa 50188753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 17819 - 17736
Alignment:
Q  1 tgtttgtgttttttaat-ttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaa 85  Q
    ||||||||||||||||| || ||  |||| | |||||||||| |||||||||||||||| || || ||||||||| ||||||||||    
T  17819 tgtttgtgttttttaatattgaaaaaaaagaaactcgaagta-aattaaattgattgatatttga-ttaagaaaagaaaataaaaa 17736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 38854487 - 38854403
Alignment:
Q  1 tgtttgtgttttttaat-ttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaa 85  Q
    ||||||||||||||||| || ||  |||| |||||  ||||| | ||||||||||||| ||| |||| ||||||||||||||||||    
T  38854487 tgtttgtgttttttaatattgaaaaaaaagagacttaaagtaaagttaaattgattgaagtttgatt-aagaaaataaaataaaaa 38854403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 190
Target Start/End: Complemental strand, 36889056 - 36889004
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtcc 190  Q
    |||| |||||| ||||| |||||| ||||||||||||||| || |||||||||    
T  36889056 gggttaataccacttttggtccctataatattagcgaattttggttttagtcc 36889004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 175
Target Start/End: Original strand, 48579871 - 48579903
Alignment:
Q  143 aatacctcttttcgtccctgtaatattagcgaa 175  Q
    |||||||||||||||||||||||||||| ||||    
T  48579871 aatacctcttttcgtccctgtaatattaacgaa 48579903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 69; Significance: 4e-31; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 22181 - 22281
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaagacagtcgctttatt 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| |||||||||  |||| |||||||||||||||||||||||||| ||| ||| |||    
T  22181 tgtttgtgttttttaatttaaatgaaaatggactcgaagtagaatcaaattgattattgtttgatttaagaaaataaaataaaaagacggtcacttgatt 22280  T
Q  101 t 101  Q
    |    
T  22281 t 22281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 12479 - 12562
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaa 84  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||| || || ||||||||||||||||||||||    
T  12479 tgtttgtgttttttaatttaaatgaacatggactcgaagtagaattaaattgattaatatttgatttaagaaaataaaataaaa 12562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 69; Significance: 4e-31; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 18709411 - 18709327
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaa 85  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  18709411 tgtttgtgttttttaatttaaatgaaaataaactcaaagtagaattaaattgattaatgtttgatttaagaaaataaaataaaaa 18709327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 18694036 - 18693952
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaa 85  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||||| |||| ||||| |||||||||||||||||||||||    
T  18694036 tgtttgtgttttttaatttaaatgaaaataaactcaaagtagaattaaatagattaatgtttgatttaagaaaataaaataaaaa 18693952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 29458 - 29580
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaagacagtcgctttatt 100  Q
    |||||||||||||||||||||| |||||| |||| || |||||||||| ||||||||  || |||| ||||||||||||||||||||| ||| ||| |||    
T  29458 tgtttgtgttttttaatttaaaagaaaatggacttgaggtagaattaagttgattgaaatttgatt-aagaaaataaaataaaaagacggtcacttgatt 29556  T
Q  101 taagatcacggtttattgtaaaaa 124  Q
    |||||||| |||||||| ||||||    
T  29557 taagatcaaggtttattataaaaa 29580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 14253903 - 14253820
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaa 84  Q
    ||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||| ||||| ||||||||||||||||||||||    
T  14253903 tgtttgtgttttttaatttaaatgaaagtagactcaaagtaaaattaaattgattaatgtttgatttaagaaaataaaataaaa 14253820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 6195520 - 6195437
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaa 85  Q
    |||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||| || ||||||||| ||||||||||    
T  6195520 tgtttgtgttttttaatttaaatgaaaataaactcaaggtagaattaaattgattgatgtttga-ttaagaaaagaaaataaaaa 6195437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 6203104 - 6203021
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaa 85  Q
    |||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||| || ||||||||| ||||||||||    
T  6203104 tgtttgtgttttttaatttaaatgaaaataaactcaaggtagaattaaattgattgatgtttga-ttaagaaaagaaaataaaaa 6203021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 138 - 237
Target Start/End: Original strand, 9266975 - 9267075
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat-nnnnnnnngatttagattttgtccctgtaatttcatattctt 236  Q
    ||||||||||||||||||||||||||||||||||||||||  | ||||||||||| |         ||||||||||||||||||||||||||||||||||    
T  9266975 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 9267074  T
Q  237 c 237  Q
    |    
T  9267075 c 9267075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 135 - 237
Target Start/End: Original strand, 19720330 - 19720433
Alignment:
Q  135 attgggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat-nnnnnnnngatttagattttgtccctgtaatttcatatt 233  Q
    |||||||||||| ||||||||||||||||||||||||||||||  | ||||||||||| |         |||||||||||||||||||||||||||||||    
T  19720330 attgggtaaatatctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatatt 19720429  T
Q  234 cttc 237  Q
    ||||    
T  19720430 cttc 19720433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 138 - 233
Target Start/End: Complemental strand, 14262414 - 14262318
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat-nnnnnnnngatttagattttgtccctgtaatttcatatt 233  Q
    ||||||||||||||||||||||||||||||||||||||||  | ||||||||||| |         |||||||||||||||||||||||||||||||    
T  14262414 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatatt 14262318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 16722369 - 16722269
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat-nnnnnnnngatttagattttgtccctgtaatttcatattctt 236  Q
    ||||||||||||||||||||||||||||||||||||||||    ||||||||||| |         ||||||||||||||||||||||||||||||||||    
T  16722369 gggtaaatacctcttttcgtccctgtaatattagcgaatttcagttttagtccctgtacaaaaaaagatttagattttgtccctgtaatttcatattctt 16722270  T
Q  237 c 237  Q
    |    
T  16722269 c 16722269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 138 - 233
Target Start/End: Complemental strand, 30500418 - 30500323
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaatttcatatt 233  Q
    ||||||||||||||||||||||||||||||||||||||||    ||||||||||| |         ||||||||||||||||||||||||||||||    
T  30500418 gggtaaatacctcttttcgtccctgtaatattagcgaattccagttttagtccctgtaaaaaaaaaatttagattttgtccctgtaatttcatatt 30500323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 137 - 237
Target Start/End: Original strand, 5800604 - 5800705
Alignment:
Q  137 tgggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat-nnnnnnnngatttagattttgtccctgtaatttcatattct 235  Q
    |||||||||||||||||||||||||||||||||| ||||||  | ||||||||||| |         |||||||||| ||||||||||||||||||||||    
T  5800604 tgggtaaatacctcttttcgtccctgtaatattaacgaatttcggttttagtccctgtaaaaaaaaggatttagattatgtccctgtaatttcatattct 5800703  T
Q  236 tc 237  Q
    ||    
T  5800704 tc 5800705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 136 - 237
Target Start/End: Complemental strand, 14162250 - 14162149
Alignment:
Q  136 ttgggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaatttcatattct 235  Q
    |||||| |||||||||||| ||||||||||||||||||||||  | ||||||||||| |        |||||||||||||||| |||||||||| |||||    
T  14162250 ttgggttaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaaaaagagatttagattttgtccttgtaatttcagattct 14162151  T
Q  236 tc 237  Q
    ||    
T  14162150 tc 14162149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 14171964 - 14171864
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat-nnnnnnnngatttagattttgtccctgtaatttcatattctt 236  Q
    ||||||||||||||||||||||||||||||||||||||||  | ||||||||||| |         ||||||||||||||||||||||||||  ||||||    
T  14171964 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttctgattctt 14171865  T
Q  237 c 237  Q
    |    
T  14171864 c 14171864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 33372782 - 33372682
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccct-atnnnnnnnngatttagattttgtccctgtaatttcatattctt 236  Q
    ||||||||||||||||||||||| ||||||||||||||||  ||||||||| |||  |        ||||||||||||||||||||||||||| ||||||    
T  33372782 gggtaaatacctcttttcgtccccgtaatattagcgaatttcgattttagttcctgttaaaaaaaagatttagattttgtccctgtaatttcagattctt 33372683  T
Q  237 c 237  Q
    |    
T  33372682 c 33372682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 9267352 - 9267253
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaatttcatattcttc 237  Q
    |||||||||||||||||||||| |||||||||||||||||  ||||||||||||| |          ||||||||||||||||||||| ||| |||||||    
T  9267352 gggtaaatacctcttttcgtccttgtaatattagcgaattccgattttagtccctgtatataaattttttagattttgtccctgtaatatcagattcttc 9267253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 138 - 237
Target Start/End: Original strand, 14171587 - 14171686
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaatttcatattcttc 237  Q
    ||||||||||| ||||||||||||||||||||||||||||  ||||||| |  || |        ||||||||||||||||||||||||||| |||||||    
T  14171587 gggtaaataccacttttcgtccctgtaatattagcgaattccgattttaatttctgtaaaaaaaagatttagattttgtccctgtaatttcaaattcttc 14171686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 138 - 237
Target Start/End: Original strand, 30500043 - 30500141
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaatttcatattcttc 237  Q
    |||| ||||||||||||| |||||||||||||||||||||  | ||||||||||| |         ||||||||||||||||||||||||||||||||||    
T  30500043 gggttaatacctcttttcatccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaa-atttagattttgtccctgtaatttcatattcttc 30500141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 138 - 236
Target Start/End: Original strand, 45969915 - 45970014
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat-nnnnnnnngatttagattttgtccctgtaatttcatattctt 236  Q
    |||||||||||||||||||||||||||||||||| |||||  | ||||||||||| |         ||||||||||||||||||||||||||| ||||||    
T  45969915 gggtaaatacctcttttcgtccctgtaatattagtgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattctt 45970014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 138 - 237
Target Start/End: Original strand, 19112764 - 19112865
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccc--tatnnnnnnnngatttagattttgtccctgtaatttcatattct 235  Q
    |||||||||||||||||||||| |||||||||||||||||  | ||||||||||  ||         ||||||||||||||||||| |||||||||||||    
T  19112764 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctggaatttcatattct 19112863  T
Q  236 tc 237  Q
    ||    
T  19112864 tc 19112865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 138 - 192
Target Start/End: Complemental strand, 35996053 - 35995999
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccct 192  Q
    |||||||||| |||||||||||||||||||||||||||||  |||||||||||||    
T  35996053 gggtaaatacatcttttcgtccctgtaatattagcgaattccgattttagtccct 35995999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 137 - 237
Target Start/End: Original strand, 14161870 - 14161971
Alignment:
Q  137 tgggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat-nnnnnnnngatttagattttgtccctgtaatttcatattct 235  Q
    |||||||||| ||||||||||||||||||||||||||||||    ||||||| |||||         |||||||||| ||||||||||||||||||||||    
T  14161870 tgggtaaatatctcttttcgtccctgtaatattagcgaattccagttttagttcctataaaaaaaaagatttagattatgtccctgtaatttcatattct 14161969  T
Q  236 tc 237  Q
    ||    
T  14161970 tc 14161971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 131
Target Start/End: Complemental strand, 13555182 - 13555122
Alignment:
Q  71 aaaataaaataaaaagacagtcgctttatttaagatcacggtttattgtaaaaagtttttt 131  Q
    |||||||||||||||||| ||| ||| ||||||||||| |||||||||| |||||||||||    
T  13555182 aaaataaaataaaaagacggtcacttgatttaagatcaaggtttattgtgaaaagtttttt 13555122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 21633274 - 21633174
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat-nnnnnnnngatttagattttgtccctgtaatttcatattctt 236  Q
    |||||||||||| || ||||||||||||||||||||||||    |||||||||||||         ||||||||||||||||||||||||||| ||||||    
T  21633274 gggtaaatacctattctcgtccctgtaatattagcgaatttcagttttagtccctataaaaaaaaagatttagattttgtccctgtaatttcagattctt 21633175  T
Q  237 c 237  Q
    |    
T  21633174 c 21633174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 229
Target Start/End: Original strand, 33372406 - 33372498
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat-nnnnnnnngatttagattttgtccctgtaatttca 229  Q
    ||||||||| |||||||||||||||||||||||||||||| || ||||||| ||| |         |||||||||||||||||||||||||||    
T  33372406 gggtaaatatctcttttcgtccctgtaatattagcgaattctggttttagttcctgtaaataaaaagatttagattttgtccctgtaatttca 33372498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 138 - 177
Target Start/End: Original strand, 16721991 - 16722030
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaatt 177  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  16721991 gggtaaatacctcttttcgtccctgtaatattagcgaatt 16722030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 138 - 177
Target Start/End: Original strand, 20853695 - 20853734
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaatt 177  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  20853695 gggtaaatacctcttttcgtccctgtaatattagcgaatt 20853734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 138 - 177
Target Start/End: Original strand, 21632901 - 21632940
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaatt 177  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  21632901 gggtaaatacctcttttcgtccctgtaatattagcgaatt 21632940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 135 - 237
Target Start/End: Original strand, 45003493 - 45003596
Alignment:
Q  135 attgggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat-nnnnnnnngatttagattttgtccctgtaatttcatatt 233  Q
    |||||||||||| ||||||||||||| ||||||||||| ||||  | ||| |||||||||         ||||||||||||||||||||||||||| |||    
T  45003493 attgggtaaatatctcttttcgtccccgtaatattagcaaattccggtttcagtccctataaaataaaagatttagattttgtccctgtaatttcagatt 45003592  T
Q  234 cttc 237  Q
    ||||    
T  45003593 cttc 45003596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 139 - 237
Target Start/End: Complemental strand, 52553065 - 52552966
Alignment:
Q  139 ggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat-nnnnnnnngatttagattttgtccctgtaatttcatattcttc 237  Q
    ||||||||| ||||||||||| ||||||||||||||||| |  ||||||||||| |         ||||||||||||||| |||||||||||||||||||    
T  52553065 ggtaaatacatcttttcgtccttgtaatattagcgaattctagttttagtccctgtaaaaaaaaagatttagattttgtctctgtaatttcatattcttc 52552966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 237
Target Start/End: Complemental strand, 5800984 - 5800883
Alignment:
Q  136 ttgggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat-nnnnnnnngatttagattttgtccctgtaatttcatattc 234  Q
    |||||| |||||||||||||||||||||||||||||||||||  |  |||||||||| |         |||||||||||||||| |||||||||||||||    
T  5800984 ttgggttaatacctcttttcgtccctgtaatattagcgaattccg-gtttagtccctgtaaaaaaaaagatttagattttgtccttgtaatttcatattc 5800886  T
Q  235 ttc 237  Q
    |||    
T  5800885 ttc 5800883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 138 - 192
Target Start/End: Complemental strand, 27946243 - 27946189
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccct 192  Q
    ||||||||||||||||||||||| ||||||||||||||||  | |||||||||||    
T  27946243 gggtaaatacctcttttcgtcccagtaatattagcgaattccggttttagtccct 27946189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 138 - 192
Target Start/End: Original strand, 35995678 - 35995732
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccct 192  Q
    |||||||||||||||||||| |||||||||||||||||||  | |||||||||||    
T  35995678 gggtaaatacctcttttcgttcctgtaatattagcgaattccggttttagtccct 35995732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 138 - 192
Target Start/End: Complemental strand, 45970294 - 45970240
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccct 192  Q
    |||||||||||||||||||||||||||||||||| |||||  | |||||||||||    
T  45970294 gggtaaatacctcttttcgtccctgtaatattagtgaatttcggttttagtccct 45970240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 138 - 237
Target Start/End: Original strand, 49986527 - 49986628
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccc--tatnnnnnnnngatttagattttgtccctgtaatttcatattct 235  Q
    |||||||||||||||||||||||||||||||||| |||||  | |||||||| |  ||         ||||||||||||||||||||||||||| |||||    
T  49986527 gggtaaatacctcttttcgtccctgtaatattagagaattccggttttagtcactgtaaaaaaaaaagatttagattttgtccctgtaatttcagattct 49986626  T
Q  236 tc 237  Q
    ||    
T  49986627 tc 49986628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 123
Target Start/End: Complemental strand, 14425654 - 14425597
Alignment:
Q  66 ttaagaaaataaaataaaaagacagtcgctttatttaagatcacggtttattgtaaaa 123  Q
    |||| |||||||||||||||||| ||| ||| ||||||||||| ||||||||||||||    
T  14425654 ttaaaaaaataaaataaaaagacggtcacttgatttaagatcaaggtttattgtaaaa 14425597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 192
Target Start/End: Original strand, 27946114 - 27946163
Alignment:
Q  143 aatacctcttttcgtccctgtaatattagcgaattatgattttagtccct 192  Q
    |||||||||||||||||||||||||||||||||||  | |||||||||||    
T  27946114 aatacctcttttcgtccctgtaatattagcgaatttcggttttagtccct 27946163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 137 - 237
Target Start/End: Original strand, 15328462 - 15328560
Alignment:
Q  137 tgggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaatttcatattctt 236  Q
    ||||||||||||||||||||| |||||||||||||  ||||  | ||||||||||| |         | |||||||||||||||||||||||||||||||    
T  15328462 tgggtaaatacctcttttcgttcctgtaatattagtaaatttcgtttttagtccctgtaaaaaaa--aattagattttgtccctgtaatttcatattctt 15328559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 19113143 - 19113043
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat-nnnnnnnngatttagattttgtccctgtaatttcatattctt 236  Q
    |||||||||||||||||||||||| |||||||| ||||||  | ||||||||||| |         |||||||||||| |||||||||||||| ||||||    
T  19113143 gggtaaatacctcttttcgtccctataatattaacgaattccggttttagtccctgtaaaaaaaaagatttagattttatccctgtaatttcagattctt 19113044  T
Q  237 c 237  Q
    |    
T  19113043 c 19113043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 237
Target Start/End: Complemental strand, 20854082 - 20853974
Alignment:
Q  129 tttgttattgggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaatttc 228  Q
    |||||| | ||||||||| |||||||||||| |||||||||||||||||  | |||||||||            ||||||||||||||||||||||||||    
T  20854082 tttgttttagggtaaatatctcttttcgtccatgtaatattagcgaatttcggttttagtcctgtaaaaaaaaagatttagattttgtccctgtaatttc 20853983  T
Q  229 atattcttc 237  Q
    | |||||||    
T  20853982 agattcttc 20853974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 138 - 237
Target Start/End: Original strand, 43572389 - 43572489
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat-nnnnnnnngatttagattttgtccctgtaatttcatattctt 236  Q
    |||||||||| ||||||||| |||||||||||||||||||  | ||||||||||| |          |||||||||||||||||||||||||| ||||||    
T  43572389 gggtaaatacatcttttcgttcctgtaatattagcgaatttcggttttagtccctgtaaaaagaaaaatttagattttgtccctgtaatttcagattctt 43572488  T
Q  237 c 237  Q
    |    
T  43572489 c 43572489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 177
Target Start/End: Complemental strand, 17465745 - 17465706
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaatt 177  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  17465745 gggtaaatacctcttttcgtccttgtaatattagcgaatt 17465706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 177
Target Start/End: Complemental strand, 49986906 - 49986867
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaatt 177  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  49986906 gggtaaatacctcttttcgtcccagtaatattagcgaatt 49986867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 138 - 229
Target Start/End: Complemental strand, 15328839 - 15328746
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccc--tatnnnnnnnngatttagattttgtccctgtaatttca 229  Q
    |||| ||||||||||||| || |||||||||||||||||| || ||||||||||  ||         |||||||||||||||||||||||||||    
T  15328839 gggttaatacctcttttcatctctgtaatattagcgaattttggttttagtcccaataaaaaaaaaagatttagattttgtccctgtaatttca 15328746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 138 - 188
Target Start/End: Original strand, 17465367 - 17465417
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagt 188  Q
    ||||||||||||||||| |||| | ||||||||||||||| ||||||||||    
T  17465367 gggtaaatacctctttttgtccttttaatattagcgaattctgattttagt 17465417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 242
Target Start/End: Complemental strand, 17649384 - 17649283
Alignment:
Q  141 taaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaatttcatattcttcgac 240  Q
    |||||||||||||||| |||||||||| |||||||||  | ||||||| |||          ||||||||||||||||||||||||||| ||| ||| ||    
T  17649384 taaatacctcttttcgaccctgtaatactagcgaattccggttttagttcctggaaaaaaaagatttagattttgtccctgtaatttcagattattccac 17649285  T
Q  241 at 242  Q
    ||    
T  17649284 at 17649283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 237
Target Start/End: Original strand, 4204708 - 4204808
Alignment:
Q  137 tgggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaatttcatattctt 236  Q
    |||||||| |||||||||||||||||||||||||  |||||    ||||||| ||| |        |||||||||| |||||||||||||||| ||||||    
T  4204708 tgggtaaagacctcttttcgtccctgtaatattaatgaatttcagttttagttcctgtaaaaaaaagatttagattatgtccctgtaatttcagattctt 4204807  T
Q  237 c 237  Q
    |    
T  4204808 c 4204808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 127
Target Start/End: Original strand, 6957158 - 6957214
Alignment:
Q  71 aaaataaaataaaaagacagtcgctttatttaagatcacggtttattgtaaaaagtt 127  Q
    |||||||||||| ||||| ||| ||| ||||||||||| |||||||||| |||||||    
T  6957158 aaaataaaataagaagacggtcacttgatttaagatcaaggtttattgtgaaaagtt 6957214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 127
Target Start/End: Original strand, 6971438 - 6971494
Alignment:
Q  71 aaaataaaataaaaagacagtcgctttatttaagatcacggtttattgtaaaaagtt 127  Q
    |||||||||||| ||||| ||| ||| ||||||||||| |||||||||| |||||||    
T  6971438 aaaataaaataagaagacggtcacttgatttaagatcaaggtttattgtgaaaagtt 6971494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 237
Target Start/End: Original strand, 14262036 - 14262136
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnng-atttagattttgtccctgtaatttcatattctt 236  Q
    |||| |||| ||||||||||||||||||||||||||||||  | ||||||||| | |          |||||||||||||||||||||||||| ||||||    
T  14262036 gggttaatatctcttttcgtccctgtaatattagcgaattccggttttagtccttgtaaaaaaaaatatttagattttgtccctgtaatttcagattctt 14262135  T
Q  237 c 237  Q
    |    
T  14262136 c 14262136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 15527483 - 15527566
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaa 85  Q
    |||||||||||||| ||| ||| ||||   |||||||||||  ||||||||||||||| || || ||||||||||||||| ||||    
T  15527483 tgtttgtgtttttttattaaaaagaaagatgactcgaagtatgattaaattgattgatatttga-ttaagaaaataaaatgaaaa 15527566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 15536172 - 15536255
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaa 85  Q
    |||||||||||||| ||| ||| ||||   |||||||||||  ||||||||||||||| || || ||||||||||||||| ||||    
T  15536172 tgtttgtgtttttttattaaaaagaaagatgactcgaagtatgattaaattgattgatatttga-ttaagaaaataaaatgaaaa 15536255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 192
Target Start/End: Original strand, 11003732 - 11003786
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccct 192  Q
    ||||||||||||||||| |||| |||||||||| ||||||  | |||||||||||    
T  11003732 gggtaaatacctctttttgtccttgtaatattaccgaattccggttttagtccct 11003786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 12558977 - 12558894
Alignment:
Q  1 tgtttgtgttttttaat-ttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaa 85  Q
    ||||||||||||||||| || ||  |||| |||||  ||||| | ||||||||||||| ||| |||||||||||| ||||||||||    
T  12558977 tgtttgtgttttttaatattgaa--aaaagagacttaaagtaaagttaaattgattgaagtttgatttaagaaaagaaaataaaaa 12558894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Original strand, 20853762 - 20853796
Alignment:
Q  203 gatttagattttgtccctgtaatttcatattcttc 237  Q
    |||||||||||||||||| ||||||||||||||||    
T  20853762 gatttagattttgtccctataatttcatattcttc 20853796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 49965558 - 49965671
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaat-aaaaagacagtcgctttat 99  Q
    ||||||||||||||||| | || |||||| |||||    || ||||||||||||| ||||| |||| ||| ||||||||| |||||||| ||| ||| ||    
T  49965558 tgtttgtgttttttaatattaaagaaaatggactcatgataaaattaaattgattaatgtttgattaaag-aaataaaataaaaaagacggtcacttgat 49965656  T
Q  100 ttaagatcacggttt 114  Q
    ||| ||||| |||||    
T  49965657 ttaggatcaaggttt 49965671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Original strand, 52552758 - 52552792
Alignment:
Q  203 gatttagattttgtccctgtaatttcatattcttc 237  Q
    ||||||||||||||||||||||||||| |||||||    
T  52552758 gatttagattttgtccctgtaatttcagattcttc 52552792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 191
Target Start/End: Complemental strand, 3426026 - 3425973
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccc 191  Q
    |||| |||||||||||| | ||||||||||||||||||||  | ||||||||||    
T  3426026 gggttaatacctcttttggcccctgtaatattagcgaattccggttttagtccc 3425973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 124
Target Start/End: Original strand, 28703092 - 28703211
Alignment:
Q  3 tttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaagacagtcgctttattta 102  Q
    |||||||||||||  ||||| ||||  ||||| ||| || | ||||||||||||| ||| |||| ||||||  ||| ||||| ||| | | ||| |||||    
T  28703092 tttgtgttttttatattaaaagaaag-agacttgaaataaagttaaattgattgaagtttgatt-aagaaagaaaattaaaatgacggccacttgattta 28703189  T
Q  103 agatcacggtttattgtaaaaa 124  Q
    |||||| |||||||||||||||    
T  28703190 agatcaaggtttattgtaaaaa 28703211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 127
Target Start/End: Complemental strand, 30013039 - 30012978
Alignment:
Q  66 ttaagaaaataaaataaaaagacagtcgctttatttaagatcacggtttattgtaaaaagtt 127  Q
    ||||||||| ||||| ||||||| ||| ||| ||||||||||| |||||| ||| |||||||    
T  30013039 ttaagaaaaaaaaatgaaaagacggtcacttgatttaagatcaaggtttactgtgaaaagtt 30012978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 127
Target Start/End: Complemental strand, 30022406 - 30022345
Alignment:
Q  66 ttaagaaaataaaataaaaagacagtcgctttatttaagatcacggtttattgtaaaaagtt 127  Q
    ||||||||| ||||| ||||||| ||| ||| ||||||||||| |||||| ||| |||||||    
T  30022406 ttaagaaaaaaaaatgaaaagacggtcacttgatttaagatcaaggtttactgtgaaaagtt 30022345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 37254629 - 37254681
Alignment:
Q  32 actcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaa 85  Q
    ||||||||||  ||||||||||||||| || |||| ||||||||||||||||||    
T  37254629 actcgaagtatgattaaattgattgatatttgatt-aagaaaataaaataaaaa 37254681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 37264469 - 37264521
Alignment:
Q  32 actcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaa 85  Q
    ||||||||||  ||||||||||||||| || |||| ||||||||||||||||||    
T  37264469 actcgaagtatgattaaattgattgatatttgatt-aagaaaataaaataaaaa 37264521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 174
Target Start/End: Original strand, 3424774 - 3424810
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcga 174  Q
    |||| |||||||||||| |||||||||||||||||||    
T  3424774 gggttaatacctcttttggtccctgtaatattagcga 3424810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 85
Target Start/End: Original strand, 11628370 - 11628450
Alignment:
Q  2 gtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaa 85  Q
    ||||||||||||||  ||||| ||||   ||||| ||||| ||||||||| |||||| || |||| ||||||||||||||||||    
T  11628370 gtttgtgtttttta--ttaaaagaaagatgactcaaagtataattaaatttattgatatttgatt-aagaaaataaaataaaaa 11628450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 127
Target Start/End: Original strand, 16469769 - 16469825
Alignment:
Q  71 aaaataaaataaaaagacagtcgctttatttaagatcacggtttattgtaaaaagtt 127  Q
    |||||||||||| ||||| ||  ||| ||||||||||| |||||||||| |||||||    
T  16469769 aaaataaaataagaagacggttacttgatttaagatcaaggtttattgtgaaaagtt 16469825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 237
Target Start/End: Original strand, 35995746 - 35995778
Alignment:
Q  205 tttagattttgtccctgtaatttcatattcttc 237  Q
    ||||||||||||||||||||||||| |||||||    
T  35995746 tttagattttgtccctgtaatttcagattcttc 35995778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 69; Significance: 4e-31; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 29755978 - 29755895
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaa 85  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  29755978 tgtttgtgttttttaatttaaatgaaaataaactcgaagtagaattaaattgattgatgtttga-ttaagaaaataaaataaaaa 29755895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 378125 - 378065
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgtt 61  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  378125 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgtt 378065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 126 - 237
Target Start/End: Original strand, 17850575 - 17850686
Alignment:
Q  126 ttttttgttattgggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaat 225  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||        ||||||||||||||| |||||||    
T  17850575 ttttttttttttgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttagtccctataaaaaaaagatttagattttgtctctgtaat 17850674  T
Q  226 ttcatattcttc 237  Q
    || | |||||||    
T  17850675 ttaagattcttc 17850686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 124
Target Start/End: Complemental strand, 22935916 - 22935795
Alignment:
Q  3 tttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaa-gacagtcgctttattt 101  Q
    ||||||||||||||||||||||||||||||||| ||||| | |||||||||||||| || || |||||||||||||||||||| |||  || ||| ||||    
T  22935916 tttgtgttttttaatttaaatgaaaatagactcaaagtatagttaaattgattgatatttga-ttaagaaaataaaataaaaaggacgatcacttgattt 22935818  T
Q  102 aagatcacggtttattgtaaaaa 124  Q
    | ||||| |||||||| ||||||    
T  22935817 aggatcaaggtttattataaaaa 22935795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 124
Target Start/End: Complemental strand, 22941879 - 22941758
Alignment:
Q  3 tttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaa-gacagtcgctttattt 101  Q
    ||||||||||||||||||||||||||||||||| ||||| | |||||||||||||| || || |||||||||||||||||||| |||  || ||| ||||    
T  22941879 tttgtgttttttaatttaaatgaaaatagactcaaagtatagttaaattgattgatatttga-ttaagaaaataaaataaaaaggacgatcacttgattt 22941781  T
Q  102 aagatcacggtttattgtaaaaa 124  Q
    | ||||| |||||||| ||||||    
T  22941780 aggatcaaggtttattataaaaa 22941758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 124
Target Start/End: Complemental strand, 22955774 - 22955653
Alignment:
Q  3 tttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaa-gacagtcgctttattt 101  Q
    ||||||||||||||||||||||||||||||||| ||||| | |||||||||||||| || || |||||||||||||||||||| |||  || ||| ||||    
T  22955774 tttgtgttttttaatttaaatgaaaatagactcaaagtatagttaaattgattgatatttga-ttaagaaaataaaataaaaaggacgatcacttgattt 22955676  T
Q  102 aagatcacggtttattgtaaaaa 124  Q
    | ||||| |||||||| ||||||    
T  22955675 aggatcaaggtttattataaaaa 22955653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 138 - 237
Target Start/End: Original strand, 19251471 - 19251570
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaatttcatattcttc 237  Q
    |||| |||||||||||||||||||||||||||||||||||  | ||||||||||| |        |||||||||||||||||||||||||||||||||||    
T  19251471 gggttaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcatattcttc 19251570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 133 - 237
Target Start/End: Complemental strand, 23806335 - 23806230
Alignment:
Q  133 ttattgggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat-nnnnnnnngatttagattttgtccctgtaatttcata 231  Q
    |||||||||||||||||||||| ||||||||||||||||||||||  | ||||||||||| |         |||||||||||||||||||||||||||||    
T  23806335 ttattgggtaaatacctctttttgtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcata 23806236  T
Q  232 ttcttc 237  Q
    ||||||    
T  23806235 ttcttc 23806230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 136 - 237
Target Start/End: Original strand, 23854686 - 23854788
Alignment:
Q  136 ttgggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat-nnnnnnnngatttagattttgtccctgtaatttcatattc 234  Q
    |||||| |||||||||||||||||||||||||||||||||||  | ||||||||||| |         ||||||||||||||||||||||||||||||||    
T  23854686 ttgggttaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattc 23854785  T
Q  235 ttc 237  Q
    |||    
T  23854786 ttc 23854788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 136 - 237
Target Start/End: Complemental strand, 15106445 - 15106345
Alignment:
Q  136 ttgggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaatttcatattct 235  Q
    ||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||| |         |||||||||||||||||||||||||| |||||    
T  15106445 ttgggtaaatacctcttttcgtccccgtaatattagcgaatttcgattttagtccctgtaaaaaaaa-atttagattttgtccctgtaatttcagattct 15106347  T
Q  236 tc 237  Q
    ||    
T  15106346 tc 15106345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 136 - 237
Target Start/End: Original strand, 22263190 - 22263291
Alignment:
Q  136 ttgggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaatttcatattct 235  Q
    |||||| ||||| ||||||| ||||||||||||||| ||||| || |||||||| ||||        |||||||||||||||||||||||||||||||||    
T  22263190 ttgggttaatacatcttttcatccctgtaatattagagaattctggttttagtctctatgaaaaaaagatttagattttgtccctgtaatttcatattct 22263289  T
Q  236 tc 237  Q
    ||    
T  22263290 tc 22263291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 136 - 233
Target Start/End: Original strand, 34548572 - 34548669
Alignment:
Q  136 ttgggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaatttcatatt 233  Q
    |||||||||||| ||||||||||||||||||||||| ||||| || ||||||||||| |        |||||||||||||||| ||||||||||||||    
T  34548572 ttgggtaaatacttcttttcgtccctgtaatattagtgaattttggttttagtccctgtaaaaaaaagatttagattttgtccatgtaatttcatatt 34548669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 17332000 - 17332082
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaa 85  Q
    ||||||||||||||| ||||| |||||||  |||||||||||||||||||||||||||||| || ||||||||| ||||||||||    
T  17332000 tgtttgtgtttttta-tttaagtgaaaattaactcgaagtagaattaaattgattgatgtttga-ttaagaaaagaaaataaaaa 17332082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 26236472 - 26236373
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaatttcatattcttc 237  Q
    ||||||||||||||||||||||||||||||||||||||||  | ||||||||| |          ||||||||||||||||||||||||||| |||||||    
T  26236472 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccttggaaaaaaaagatttagattttgtccctgtaatttcagattcttc 26236373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 17463469 - 17463369
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat-nnnnnnnngatttagattttgtccctgtaatttcatattctt 236  Q
    ||||||||||||||||||| ||||||||||||||||||||  | ||||||||||| |         |||||||||||||||||||||||| |||||||||    
T  17463469 gggtaaatacctcttttcgcccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaattgcatattctt 17463370  T
Q  237 c 237  Q
    |    
T  17463369 c 17463369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 19251847 - 19251748
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaatttcatattcttc 237  Q
    |||||||||||||||||||||| ||||||||||| |||||  | ||||||||||| |        |||||||||| ||||| ||||||||||||||||||    
T  19251847 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgtaaaaaaaagatttagattctgtccttgtaatttcatattcttc 19251748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 23855074 - 23855033
Alignment:
Q  136 ttgggtaaatacctcttttcgtccctgtaatattagcgaatt 177  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  23855074 ttgggtaaatacctcttttcgtccctgtaatattagcgaatt 23855033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 237
Target Start/End: Original strand, 26135828 - 26135917
Alignment:
Q  149 tcttttcgtccctgtaatattagcgaattatgattttagtccctat-nnnnnnnngatttagattttgtccctgtaatttcatattcttc 237  Q
    |||||||||||||||||||||||||||||  ||||||||||||| |         ||||||||||||||||||||||||||| |||||||    
T  26135828 tcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttc 26135917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 17850964 - 17850864
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat-nnnnnnnngatttagattttgtccctgtaatttcatattctt 236  Q
    ||||||||||||||||||||||||||||||||||||||||  | |||||||| || |         | ||||||||||||||||||||||||| ||||||    
T  17850964 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtcactgtaaataaaatgctttagattttgtccctgtaatttcagattctt 17850865  T
Q  237 c 237  Q
    |    
T  17850864 c 17850864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 191
Target Start/End: Complemental strand, 26560932 - 26560880
Alignment:
Q  139 ggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccc 191  Q
    ||||||||||||||||||||| |||||||||||||||||  ||||||||||||    
T  26560932 ggtaaatacctcttttcgtccttgtaatattagcgaattccgattttagtccc 26560880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 138 - 236
Target Start/End: Original strand, 26236127 - 26236226
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat-nnnnnnnngatttagattttgtccctgtaatttcatattctt 236  Q
    ||||||||| |||||||||||| ||||||||||||||||| || ||||||||||| |         |||||| |||||||||||||||||||| ||||||    
T  26236127 gggtaaatatctcttttcgtccttgtaatattagcgaattctggttttagtccctgtataaaaaaagatttatattttgtccctgtaatttcagattctt 26236226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 138 - 192
Target Start/End: Original strand, 20498747 - 20498801
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccct 192  Q
    |||||||||||||||||||||  |||||||||||||||||| | |||||||||||    
T  20498747 gggtaaatacctcttttcgtctatgtaatattagcgaattacggttttagtccct 20498801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 138 - 237
Target Start/End: Original strand, 26560556 - 26560654
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaatttcatattcttc 237  Q
    |||| |||| ||||||||||||||||||||||| ||||||  ||||||||||||| |        ||||||||||| ||||||||||||||| |||||||    
T  26560556 gggttaatatctcttttcgtccctgtaatattaacgaatttcgattttagtccctgt-aaaaaaagatttagatttagtccctgtaatttcagattcttc 26560654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 22263571 - 22263469
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccct---atnnnnnnnngatttagattttgtccctgtaatttcatattc 234  Q
    |||||||||||||||||||| |||||||||||||||||||  | |||||||| ||   |         |||| |||||||||||||||||||||||||||    
T  22263571 gggtaaatacctcttttcgttcctgtaatattagcgaattccggttttagtctctgtaaaaaaaaaaagattcagattttgtccctgtaatttcatattc 22263472  T
Q  235 ttc 237  Q
    |||    
T  22263471 ttc 22263469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 192
Target Start/End: Original strand, 42670715 - 42670771
Alignment:
Q  136 ttgggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccct 192  Q
    |||||| ||||||||||||||||||||||||| |||||||||  | |||||||||||    
T  42670715 ttgggttaatacctcttttcgtccctgtaatagtagcgaattccggttttagtccct 42670771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 134 - 233
Target Start/End: Complemental strand, 42671101 - 42671001
Alignment:
Q  134 tattgggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat-nnnnnnnngatttagattttgtccctgtaatttcatat 232  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||    ||||||||||| |         |||||||||| |||||||||||||||||||    
T  42671101 tattgggtaaatacctctttttgtccctgtagtattagcgaatttcagttttagtccctgtaaaaaaaaggatttagattatgtccctgtaatttcatat 42671002  T
Q  233 t 233  Q
    |    
T  42671001 t 42671001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 236
Target Start/End: Original strand, 13254497 - 13254596
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat-nnnnnnnngatttagattttgtccctgtaatttcatattctt 236  Q
    |||||||||||||||| ||| ||||||||||||||||||| || ||||| ||||| |         |||||||||||||||| |||||||||| ||||||    
T  13254497 gggtaaatacctctttccgttcctgtaatattagcgaattttggttttactccctgtaaaataaaagatttagattttgtccttgtaatttcagattctt 13254596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 135 - 177
Target Start/End: Complemental strand, 13254817 - 13254775
Alignment:
Q  135 attgggtaaatacctcttttcgtccctgtaatattagcgaatt 177  Q
    ||||| |||||| ||||||||||||||||||||||||||||||    
T  13254817 attggataaatatctcttttcgtccctgtaatattagcgaatt 13254775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 124
Target Start/End: Original strand, 22517203 - 22517322
Alignment:
Q  3 tttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaa-gacagtcgctttattt 101  Q
    |||||||||||||  ||||| ||||  ||||| |||||| | ||||||||||||| ||| |||| ||||||  |||||||||| ||| ||| ||| ||||    
T  22517203 tttgtgttttttatattaaaagaaag-agacttgaagtaaagttaaattgattgaagtttgatt-aagaaag-aaaataaaaatgacggtcacttgattt 22517299  T
Q  102 aagatcacggtttattgtaaaaa 124  Q
    ||||||| |||||||||||||||    
T  22517300 aagatcaaggtttattgtaaaaa 22517322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 136 - 237
Target Start/End: Original strand, 30390457 - 30390559
Alignment:
Q  136 ttgggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat-nnnnnnnngatttagattttgtccctgtaatttcatattc 234  Q
    ||||| ||||| |||||||||||| |||||||||||||||||  ||||||| ||||| |          | |||||||||||||||||||||||||||||    
T  30390457 ttggggaaatatctcttttcgtccatgtaatattagcgaattccgattttaatccctgtaaaaaaaaaaaattagattttgtccctgtaatttcatattc 30390556  T
Q  235 ttc 237  Q
    |||    
T  30390557 ttc 30390559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 135 - 177
Target Start/End: Complemental strand, 44099003 - 44098961
Alignment:
Q  135 attgggtaaatacctcttttcgtccctgtaatattagcgaatt 177  Q
    |||||||||||| ||||||||||||||||||||| ||||||||    
T  44099003 attgggtaaatatctcttttcgtccctgtaatatgagcgaatt 44098961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 190
Target Start/End: Complemental strand, 26136196 - 26136143
Alignment:
Q  137 tgggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtcc 190  Q
    ||||||||||||||||||||||| |||||||||| ||||||  | |||||||||    
T  26136196 tgggtaaatacctcttttcgtccttgtaatattaacgaatttcggttttagtcc 26136143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 194
Target Start/End: Complemental strand, 12419100 - 12419044
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat 194  Q
    |||| |||||| ||||| ||||||||||||||||||||||  | |||||||||||||    
T  12419100 gggttaataccacttttggtccctgtaatattagcgaattccggttttagtccctat 12419044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 194
Target Start/End: Complemental strand, 12431160 - 12431104
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat 194  Q
    |||| |||||| ||||| ||||||||||||||||||||||  | |||||||||||||    
T  12431160 gggttaataccacttttggtccctgtaatattagcgaattccggttttagtccctat 12431104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 177
Target Start/End: Original strand, 15106067 - 15106106
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaatt 177  Q
    ||||||||| ||||||||||||| ||||||||||||||||    
T  15106067 gggtaaatatctcttttcgtccccgtaatattagcgaatt 15106106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 177
Target Start/End: Original strand, 23046707 - 23046746
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaatt 177  Q
    |||||||||||||||||||||| |||||||| ||||||||    
T  23046707 gggtaaatacctcttttcgtccttgtaatatgagcgaatt 23046746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 177
Target Start/End: Complemental strand, 23047960 - 23047921
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaatt 177  Q
    |||||||||||| |||||||||||||||||| ||||||||    
T  23047960 gggtaaatacctattttcgtccctgtaatatgagcgaatt 23047921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 192
Target Start/End: Original strand, 30958683 - 30958738
Alignment:
Q  137 tgggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccct 192  Q
    ||||| |||||| ||||| ||||||||||||||||||||||  | |||||||||||    
T  30958683 tgggttaataccacttttggtccctgtaatattagcgaatttcggttttagtccct 30958738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 190
Target Start/End: Complemental strand, 44999481 - 44999435
Alignment:
Q  143 aatacctcttttcgtccctgtaatattagcgaattatgattttagtcc 190  Q
    ||||||||||||||||  ||||||||||||||||| ||||||||||||    
T  44999481 aatacctcttttcgtca-tgtaatattagcgaattctgattttagtcc 44999435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 192
Target Start/End: Complemental strand, 33290425 - 33290371
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccct 192  Q
    |||| |||||| ||||| |||||||||||||||||||||| || ||||| |||||    
T  33290425 gggttaataccgcttttggtccctgtaatattagcgaattctggttttaatccct 33290371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 177
Target Start/End: Original strand, 17463090 - 17463131
Alignment:
Q  136 ttgggtaaatacctcttttcgtccctgtaatattagcgaatt 177  Q
    |||||||||||  ||||||||||||| |||||||||||||||    
T  17463090 ttgggtaaatagttcttttcgtccctataatattagcgaatt 17463131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 203 - 236
Target Start/End: Complemental strand, 20499057 - 20499024
Alignment:
Q  203 gatttagattttgtccctgtaatttcatattctt 236  Q
    ||||||||||||||||||||||||||| ||||||    
T  20499057 gatttagattttgtccctgtaatttcagattctt 20499024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 39878452 - 39878412
Alignment:
Q  136 ttgggtaaatacctcttttcgtccctgtaatattagcgaatt 177  Q
    ||||||||||||||||||| || |||||||||||||||||||    
T  39878452 ttgggtaaatacctctttttgt-cctgtaatattagcgaatt 39878412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 12376165 - 12376083
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaa 85  Q
    ||||||||||||||| |||||   || ||| ||||||||||  ||||||||||||||| || || ||||||||||||||| ||||    
T  12376165 tgtttgtgttttttattttaagaaaagata-actcgaagtatgattaaattgattgatatttga-ttaagaaaataaaatgaaaa 12376083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 12389992 - 12389910
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaa 85  Q
    ||||||||||||||| |||||   || ||| ||||||||||  ||||||||||||||| || || ||||||||||||||| ||||    
T  12389992 tgtttgtgttttttattttaagaaaagata-actcgaagtatgattaaattgattgatatttga-ttaagaaaataaaatgaaaa 12389910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 192
Target Start/End: Complemental strand, 13284793 - 13284737
Alignment:
Q  136 ttgggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccct 192  Q
    |||||| |||||  ||||| ||||||||||||||||||||||  | |||||||||||    
T  13284793 ttgggttaatactgcttttggtccctgtaatattagcgaatttcggttttagtccct 13284737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 85
Target Start/End: Original strand, 19883375 - 19883459
Alignment:
Q  2 gtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattg-atgttggatttaagaaaataaaataaaaa 85  Q
    |||||| |||||||||||||| |||||| ||||| | |||  ||||||||||||| | ||| |||| |  |||||||||||||||    
T  19883375 gtttgtattttttaatttaaaagaaaatggactcaaggtatgattaaattgattgaaagtttgattaagaaaaataaaataaaaa 19883459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 190
Target Start/End: Complemental strand, 30960049 - 30959997
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtcc 190  Q
    |||| |||||| ||||| ||||||||||||||||||||||  | |||||||||    
T  30960049 gggttaataccacttttggtccctgtaatattagcgaattccggttttagtcc 30959997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0473 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0473
Description:

Target: scaffold0473; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 7397 - 7520
Alignment:
Q  1 tgtttgtgtt-ttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaagacagtcgctttat 99  Q
    |||||||||| |||||||||||| |||||| |||| ||||||||||||| ||||||||  || |||| ||||||||||||||||||||| ||| ||| ||    
T  7397 tgtttgtgttattttaatttaaaagaaaatggacttgaagtagaattaagttgattgaaatttgatt-aagaaaataaaataaaaagacggtcacttgat 7495  T
Q  100 ttaagatcacggtttattgtaaaaa 124  Q
    ||||||||| |||||||||||||||    
T  7496 ttaagatcaaggtttattgtaaaaa 7520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 1e-28; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 22838427 - 22838511
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaa 85  Q
    ||||||||||||| |||||||||||||||| |||| ||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  22838427 tgtttgtgtttttaaatttaaatgaaaataaactcaaagtagaattaaattgattaatgtttgatttaagaaaataaaataaaaa 22838511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 52101096 - 52100974
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaagacagtcgctttatt 100  Q
    |||||||||||||||||||||| |||||| |||| ||||||||||||| ||||||||  || || |||| |||||||||||||||||| ||| ||| |||    
T  52101096 tgtttgtgttttttaatttaaaagaaaatggacttgaagtagaattaagttgattgaaatttga-ttaaaaaaataaaataaaaagacggtcacttgatt 52100998  T
Q  101 taagatcacggtttattgtaaaaa 124  Q
    |||||||| | |||||||||||||    
T  52100997 taagatcaagatttattgtaaaaa 52100974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 138 - 237
Target Start/End: Original strand, 34749138 - 34749237
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaatttcatattcttc 237  Q
    |||||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||        ||||||||||||||||| |||||||||||||||||    
T  34749138 gggtaaatacatcttttcatccctgtaatattagcgaattctgattttagtccctataaaaaaaagatttagattttgtccccgtaatttcatattcttc 34749237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 14819190 - 14819312
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaagacagtcgctttatt 100  Q
    |||||||| ||||||||||||| |||||| |||| ||||||||||||| ||||||||  || || || |||||||||||||||||||| ||| ||| |||    
T  14819190 tgtttgtggtttttaatttaaaagaaaatggacttgaagtagaattaagttgattgaaatttga-ttgagaaaataaaataaaaagacggtcacttgatt 14819288  T
Q  101 taagatcacggtttattgtaaaaa 124  Q
    ||||| || ||||||| |||||||    
T  14819289 taagaacaaggtttatcgtaaaaa 14819312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 138 - 237
Target Start/End: Original strand, 18462286 - 18462385
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaatttcatattcttc 237  Q
    ||||||||||||||||||||||||||||||||||||||||  | ||||||||||| |        ||||||||||||||||||||||||||| |||||||    
T  18462286 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcagattcttc 18462385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 39711450 - 39711350
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat-nnnnnnnngatttagattttgtccctgtaatttcatattctt 236  Q
    |||||||||||||||||||||||||||||||||||||||| || ||||||||||| |         ||||||||||||||||| ||||||||||||||||    
T  39711450 gggtaaatacctcttttcgtccctgtaatattagcgaattctggttttagtccctgtaaaaaaaaagatttagattttgtccccgtaatttcatattctt 39711351  T
Q  237 c 237  Q
    |    
T  39711350 c 39711350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 14803712 - 14803834
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaagacagtcgctttatt 100  Q
    |||||||| ||||||||||||| |||||| |||| ||||||||||||| ||||||||  || || || ||||||||||||||||||||  || ||| |||    
T  14803712 tgtttgtggtttttaatttaaaagaaaatggacttgaagtagaattaagttgattgaaatttga-ttgagaaaataaaataaaaagacgatcacttgatt 14803810  T
Q  101 taagatcacggtttattgtaaaaa 124  Q
    ||||| || |||||||||| ||||    
T  14803811 taagaacaaggtttattgttaaaa 14803834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 138 - 237
Target Start/End: Original strand, 24467629 - 24467728
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaatttcatattcttc 237  Q
    |||||||||| |||||||||||||||||||||||||||||   |||||||||||| |        ||||||||||||||||||||||||||| |||||||    
T  24467629 gggtaaatacatcttttcgtccctgtaatattagcgaattccaattttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcagattcttc 24467728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 138 - 237
Target Start/End: Original strand, 29696565 - 29696664
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaatttcatattcttc 237  Q
    ||||||||||||||||||||||||||||||||||||||||  | |||||||| || |        ||||||||||||||||| |||||||||||||||||    
T  29696565 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtctctgtaaaaaaaagatttagattttgtccccgtaatttcatattcttc 29696664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 138 - 237
Target Start/End: Original strand, 4906962 - 4907062
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat-nnnnnnnngatttagattttgtccctgtaatttcatattctt 236  Q
    |||||||||||||||||||||||||||||||||| ||||| |  ||||||||||| |         ||||||||||||||||||||||||||||||||||    
T  4906962 gggtaaatacctcttttcgtccctgtaatattagtgaattctagttttagtccctgtaaaaaaaatgatttagattttgtccctgtaatttcatattctt 4907061  T
Q  237 c 237  Q
    |    
T  4907062 c 4907062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 63 - 131
Target Start/End: Complemental strand, 45498695 - 45498627
Alignment:
Q  63 gatttaagaaaataaaataaaaagacagtcgctttatttaagatcacggtttattgtaaaaagtttttt 131  Q
    |||||||||||||||||||||||||| ||| ||| ||||||||||| |||||||||||||| |||||||    
T  45498695 gatttaagaaaataaaataaaaagacggtcacttgatttaagatcaaggtttattgtaaaaggtttttt 45498627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 138 - 237
Target Start/End: Original strand, 30299232 - 30299331
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaatttcatattcttc 237  Q
    |||||||||||||||||||||||||||||||||||||| |  |||||||||||            |||||||||||||||||||||||||||||||||||    
T  30299232 gggtaaatacctcttttcgtccctgtaatattagcgaacttcgattttagtcctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttc 30299331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 135 - 237
Target Start/End: Original strand, 39711071 - 39711172
Alignment:
Q  135 attgggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaatttcatattc 234  Q
    ||||||||||||||||||||||| | |||||||||||||||||  | ||||||||||| |        |||||||||||||||| |||||||||||||||    
T  39711071 attgggtaaatacctcttttcgt-cttgtaatattagcgaattccggttttagtccctgtaaaaaaaagatttagattttgtccttgtaatttcatattc 39711169  T
Q  235 ttc 237  Q
    |||    
T  39711170 ttc 39711172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 136 - 237
Target Start/End: Complemental strand, 39826426 - 39826324
Alignment:
Q  136 ttgggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat-nnnnnnnngatttagattttgtccctgtaatttcatattc 234  Q
    |||||||||||||||||||||||| |||||||||||||||||  | ||||||||||| |         ||||||||||||||||||||||||||| ||||    
T  39826426 ttgggtaaatacctcttttcgtccatgtaatattagcgaatttcggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattc 39826327  T
Q  235 ttc 237  Q
    |||    
T  39826326 ttc 39826324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 191
Target Start/End: Original strand, 33628690 - 33628743
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccc 191  Q
    |||||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  33628690 gggtaaatacctcttttcgtccctgtaatattagcgaattctggttttagtccc 33628743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 138 - 237
Target Start/End: Original strand, 39826050 - 39826150
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat-nnnnnnnngatttagattttgtccctgtaatttcatattctt 236  Q
    |||||||||||||||||||||| | |||||||||||||||  ||||||||||||| |         ||||||||||||||||||||||||||| ||||||    
T  39826050 gggtaaatacctcttttcgtccatataatattagcgaatttcgattttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattctt 39826149  T
Q  237 c 237  Q
    |    
T  39826150 c 39826150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 52058386 - 52058286
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat-nnnnnnnngatttagattttgtccctgtaatttcatattctt 236  Q
    |||||||||||||||||||||||||||||||||||||||| || ||||||| ||| |         |||||||||| |||||||||||||||| ||||||    
T  52058386 gggtaaatacctcttttcgtccctgtaatattagcgaattttggttttagttcctgtagaaaaaaagatttagattatgtccctgtaatttcagattctt 52058287  T
Q  237 c 237  Q
    |    
T  52058286 c 52058286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 141 - 192
Target Start/End: Original strand, 17606307 - 17606358
Alignment:
Q  141 taaatacctcttttcgtccctgtaatattagcgaattatgattttagtccct 192  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  17606307 taaatacctcttttcgtccctgtaatattagcgaattccgattttagtccct 17606358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 20996045 - 20995946
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaatttcatattcttc 237  Q
    |||| |||||||||||| |||||||||||||||||||||| |  ||||||||| | |        ||||||||||||||| |||||||||||||||||||    
T  20996045 gggttaatacctctttttgtccctgtaatattagcgaattttagttttagtccatgtaaaaaaaagatttagattttgtctctgtaatttcatattcttc 20995946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 8293186 - 8293085
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnn--gatttagattttgtccctgtaatttcatattct 235  Q
    |||||||||||||||||||||||| |||||||| |||||| |  ||||||||||| |          |||||||||||||||||||||||||||||||||    
T  8293186 gggtaaatacctcttttcgtccctataatattaacgaattctagttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcatattct 8293087  T
Q  236 tc 237  Q
    ||    
T  8293086 tc 8293085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 17606684 - 17606586
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaatttcatattcttc 237  Q
    |||| |||||||||||||||||||||||||||||||||||  | ||||||||||| |        |||||||||||||||| |||||||||| |||||||    
T  17606684 gggttaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt-aaaaaaagatttagattttgtccttgtaatttcagattcttc 17606586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 137 - 192
Target Start/End: Complemental strand, 18342396 - 18342341
Alignment:
Q  137 tgggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccct 192  Q
    ||||||||||||| |||||||||||||||||||||||||||  | |||||||||||    
T  18342396 tgggtaaataccttttttcgtccctgtaatattagcgaatttcggttttagtccct 18342341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 237
Target Start/End: Original strand, 8292802 - 8292904
Alignment:
Q  136 ttgggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat-nnnnnnnngatttagattttgtccctgtaatttcatattc 234  Q
    ||||||||||| ||||||||||||||||| |||||||||||   | ||||||||||| |         ||||||||||||||||||| ||||||||||||    
T  8292802 ttgggtaaataactcttttcgtccctgtactattagcgaatcccggttttagtccctgtaaaataaaagatttagattttgtccctgaaatttcatattc 8292901  T
Q  235 ttc 237  Q
    |||    
T  8292902 ttc 8292904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 85
Target Start/End: Complemental strand, 19368562 - 19368479
Alignment:
Q  2 gtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattg-atgttggatttaagaaaataaaataaaaa 85  Q
    |||||| |||||||||||||| |||||| ||||| |||||  ||||||||||||| | ||| || ||||||||||||||||||||    
T  19368562 gtttgtattttttaatttaaaagaaaatggactcaaagtatgattaaattgattgaaagtttga-ttaagaaaataaaataaaaa 19368479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 127
Target Start/End: Original strand, 20312473 - 20312529
Alignment:
Q  71 aaaataaaataaaaagacagtcgctttatttaagatcacggtttattgtaaaaagtt 127  Q
    |||||||||||||||||| ||| ||| ||||||||||| |||||||||| |||||||    
T  20312473 aaaataaaataaaaagacggtcacttgatttaagatcaaggtttattgtgaaaagtt 20312529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 192
Target Start/End: Complemental strand, 39971026 - 39970970
Alignment:
Q  136 ttgggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccct 192  Q
    |||||||||||||||||||||||| |||||||||| ||||||  | |||||||||||    
T  39971026 ttgggtaaatacctcttttcgtccatgtaatattaacgaatttcggttttagtccct 39970970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 30252278 - 30252176
Alignment:
Q  138 gggtaaatacctcttttc--gtccctgtaatattagcgaattatgattttagtccctatnnnnnnnn-gatttagattttgtccctgtaatttcatattc 234  Q
    |||||||||||||||| |  |||||| ||||||||||||||| || ||||||||||| |         ||||||||||||||||| ||||||||||||||    
T  30252278 gggtaaatacctctttccttgtccctataatattagcgaattctggttttagtccctgtaaaaataaagatttagattttgtccccgtaatttcatattc 30252179  T
Q  235 ttc 237  Q
    |||    
T  30252178 ttc 30252176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 138 - 192
Target Start/End: Original strand, 20995698 - 20995752
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccct 192  Q
    |||||||||||||||||| || ||||||||||||||||||  | |||||||||||    
T  20995698 gggtaaatacctcttttcatctctgtaatattagcgaattccggttttagtccct 20995752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 66 - 124
Target Start/End: Original strand, 26198659 - 26198717
Alignment:
Q  66 ttaagaaaataaaataaaaagacagtcgctttatttaagatcacggtttattgtaaaaa 124  Q
    |||| |||||||||||||||||| ||| ||| || |||||||| |||||||||||||||    
T  26198659 ttaaaaaaataaaataaaaagacggtcacttgatataagatcaaggtttattgtaaaaa 26198717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 138 - 192
Target Start/End: Complemental strand, 33629068 - 33629014
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccct 192  Q
    |||| |||||||||||| ||||||||||||||||||||||  | |||||||||||    
T  33629068 gggttaatacctctttttgtccctgtaatattagcgaattccggttttagtccct 33629014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 136 - 190
Target Start/End: Complemental strand, 34749485 - 34749431
Alignment:
Q  136 ttgggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtcc 190  Q
    ||||||||||||||||||| ||| ||||||||||| ||||||  |||||||||||    
T  34749485 ttgggtaaatacctctttttgtctctgtaatattatcgaattccgattttagtcc 34749431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 237
Target Start/End: Original strand, 42510004 - 42510114
Alignment:
Q  127 tttttgttattgggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaatt 226  Q
    ||||| || |||||| |||||  |||||  |||||||||||||||||||||  | ||||| ||||| |         |||||||||||||||||||||||    
T  42510004 tttttttttttgggttaatactactttttatccctgtaatattagcgaattccggttttaatccctgtaaaaaaataatttagattttgtccctgtaatt 42510103  T
Q  227 tcatattcttc 237  Q
    |||||||||||    
T  42510104 tcatattcttc 42510114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 13230112 - 13230071
Alignment:
Q  136 ttgggtaaatacctcttttcgtccctgtaatattagcgaatt 177  Q
    ||||||||||||||||||||||| ||| ||||||||||||||    
T  13230112 ttgggtaaatacctcttttcgtctctgaaatattagcgaatt 13230071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 233
Target Start/End: Original strand, 48071960 - 48072057
Alignment:
Q  137 tgggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnn-gatttagattttgtccctgtaatttcatatt 233  Q
    ||||| |||| |||||||||| | ||||||||||||||||| || ||||||| ||| |         |||||||||||||||||||||||||||||||    
T  48071960 tgggttaatatctcttttcgttcatgtaatattagcgaattctggttttagttcctgtaataaaaaagatttagattttgtccctgtaatttcatatt 48072057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 2415670 - 2415753
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaa 85  Q
    ||||||||||||||||| |  |  |||| ||||| |||||| | ||||||||||||| ||| |||| ||||||||||||||||||    
T  2415670 tgtttgtgttttttaatattgaaaaaaagagacttgaagtaaagttaaattgattgaagtttgatt-aagaaaataaaataaaaa 2415753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 4907340 - 4907240
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnn-gatttagattttgtccctgtaatttcatattctt 236  Q
    ||||||||| || ||||| |||||||||||||||||||||    ||||||||||| |         ||||||||||||||||||||||||||| ||||||    
T  4907340 gggtaaatatctattttcctccctgtaatattagcgaattccagttttagtccctgtaaaataaaagatttagattttgtccctgtaatttcagattctt 4907241  T
Q  237 c 237  Q
    |    
T  4907240 c 4907240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 127
Target Start/End: Original strand, 18703321 - 18703377
Alignment:
Q  71 aaaataaaataaaaagacagtcgctttatttaagatcacggtttattgtaaaaagtt 127  Q
    |||||||||||||||||| ||| ||| ||||||||||| |||||||| | |||||||    
T  18703321 aaaataaaataaaaagacggtcacttgatttaagatcaaggtttattttgaaaagtt 18703377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 177
Target Start/End: Original strand, 52058010 - 52058050
Alignment:
Q  137 tgggtaaatacctcttttcgtccctgtaatattagcgaatt 177  Q
    ||||||||||||||||||||||| |||||||||| ||||||    
T  52058010 tgggtaaatacctcttttcgtccttgtaatattaacgaatt 52058050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 177
Target Start/End: Original strand, 27039638 - 27039677
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaatt 177  Q
    |||| |||||||||||||||||||||||||| ||||||||    
T  27039638 gggttaatacctcttttcgtccctgtaatatgagcgaatt 27039677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 177
Target Start/End: Original strand, 39970645 - 39970684
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaatt 177  Q
    |||||||||||||||||||||| |||||||||| ||||||    
T  39970645 gggtaaatacctcttttcgtccatgtaatattaacgaatt 39970684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 127
Target Start/End: Complemental strand, 49934099 - 49934048
Alignment:
Q  76 aaaataaaaagacagtcgctttatttaagatcacggtttattgtaaaaagtt 127  Q
    ||||||||||||| ||||||| |||||| |||| |||||||||| |||||||    
T  49934099 aaaataaaaagacggtcgcttgatttaaaatcaaggtttattgtgaaaagtt 49934048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Original strand, 17606374 - 17606408
Alignment:
Q  203 gatttagattttgtccctgtaatttcatattcttc 237  Q
    |||||||||||||| ||||||||||||||||||||    
T  17606374 gatttagattttgttcctgtaatttcatattcttc 17606408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Complemental strand, 24467939 - 24467905
Alignment:
Q  203 gatttagattttgtccctgtaatttcatattcttc 237  Q
    ||||||||||||||||||||||||||| |||||||    
T  24467939 gatttagattttgtccctgtaatttcagattcttc 24467905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 237
Target Start/End: Complemental strand, 30299611 - 30299509
Alignment:
Q  136 ttgggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat-nnnnnnnngatttagattttgtccctgtaatttcatattc 234  Q
    |||||||||||||| |||||||| ||||||||||||| ||||  | ||||||| ||| |         ||||||||||||||||||||||||| | ||||    
T  30299611 ttgggtaaatacctattttcgtctctgtaatattagcaaatttcggttttagttcctgtaaaaaaaaagatttagattttgtccctgtaattttagattc 30299512  T
Q  235 ttc 237  Q
    |||    
T  30299511 ttc 30299509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 48072272 - 48072239
Alignment:
Q  204 atttagattttgtccctgtaatttcatattcttc 237  Q
    ||||||||| ||||||||||||||||||||||||    
T  48072272 atttagattatgtccctgtaatttcatattcttc 48072239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 13187455 - 13187347
Alignment:
Q  3 tttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaagacagtcgctttattta 102  Q
    |||||||||||||  ||||| |||||  ||||| |||||  |||||||||||| || ||  ||| |||||||||||||||||||||  || ||| |||||    
T  13187455 tttgtgtttttta--ttaaaagaaaaatgactcaaagtatgattaaattgatttatattttatt-aagaaaataaaataaaaagacgatcacttgattta 13187359  T
Q  103 agatcacggttt 114  Q
     ||||| |||||    
T  13187358 ggatcaaggttt 13187347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 88
Target Start/End: Complemental strand, 20519887 - 20519844
Alignment:
Q  44 attaaattgattgatgttggatttaagaaaataaaataaaaagac 88  Q
    ||||||||||||||| || |||| |||||||||||||||||||||    
T  20519887 attaaattgattgatatttgatt-aagaaaataaaataaaaagac 20519844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 26198615 - 26198663
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaa 49  Q
    ||||||| |||||||||||||| |||||| |||| ||| ||||||||||    
T  26198615 tgtttgtattttttaatttaaaagaaaatggacttgaaatagaattaaa 26198663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 39456092 - 39455970
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaa-agacagtcgctttat 99  Q
    ||||||| |||||||  ||||| |||||| | ||| |||||  |||| ||||||||| ||| |||| ||||||||||||||||| | ||  || ||| ||    
T  39456092 tgtttgtattttttatattaaa-gaaaatgggctcaaagtatgattagattgattgaagtttgatt-aagaaaataaaataaaataaacgatcacttgat 39455995  T
Q  100 ttaagatcacggtttattgtaaaaa 124  Q
    ||| ||||| |||||||||||||||    
T  39455994 ttaggatcaaggtttattgtaaaaa 39455970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 85
Target Start/End: Complemental strand, 44319412 - 44319328
Alignment:
Q  2 gtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattg-atgttggatttaagaaaataaaataaaaa 85  Q
    |||||| |||||||||||||| |||||| ||||| | |||  ||||||||||||| | ||| |||| |  |||||||||||||||    
T  44319412 gtttgtattttttaatttaaaagaaaatggactcaaggtatgattaaattgattgaaagtttgattaagaaaaataaaataaaaa 44319328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 190
Target Start/End: Complemental strand, 48072339 - 48072287
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtcc 190  Q
    |||||||||||||||||||||  ||||||||||| |||||  | |||||||||    
T  48072339 gggtaaatacctcttttcgtcattgtaatattagtgaattccggttttagtcc 48072287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 64; Significance: 4e-28; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 26980828 - 26980950
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaagacagtcgctttatt 100  Q
    |||||||||||||||| |||||  ||||| |||| ||||||||||||| ||||||||  || |||| ||||||||||||||||||||| ||| ||| |||    
T  26980828 tgtttgtgttttttaagttaaaacaaaatggacttgaagtagaattaagttgattgaaatttgatt-aagaaaataaaataaaaagacggtcacttgatt 26980926  T
Q  101 taagatcacggtttattgtaaaaa 124  Q
    |||||||| |||||||||||||||    
T  26980927 taagatcaaggtttattgtaaaaa 26980950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 27073218 - 27073340
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaagacagtcgctttatt 100  Q
    ||||||||||||||||||||||  ||||| |||  ||||||||||||| ||||||||  || |||| ||||||||||||||||||||| ||| ||| |||    
T  27073218 tgtttgtgttttttaatttaaaacaaaatggacatgaagtagaattaagttgattgaaatttgatt-aagaaaataaaataaaaagacggtcacttgatt 27073316  T
Q  101 taagatcacggtttattgtaaaaa 124  Q
    |||||||| |||||||||||||||    
T  27073317 taagatcaaggtttattgtaaaaa 27073340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 138 - 237
Target Start/End: Original strand, 18500315 - 18500414
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaatttcatattcttc 237  Q
    |||||||||||||||||||||||| |||||||||||||||  | ||||||||||| |        |||||||||||||||||||||||||||||||||||    
T  18500315 gggtaaatacctcttttcgtccctataatattagcgaatttcggttttagtccctgtaagaaaaagatttagattttgtccctgtaatttcatattcttc 18500414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 32017881 - 32017782
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaatttcatattcttc 237  Q
    ||||||||| ||||||||||||||||||||||||||||||  | ||||||||||| |        |||||||||||||||||||||||||||||||||||    
T  32017881 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcatattcttc 32017782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 137 - 237
Target Start/End: Original strand, 9481181 - 9481282
Alignment:
Q  137 tgggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat-nnnnnnnngatttagattttgtccctgtaatttcatattct 235  Q
    |||||||||||||||||||||||||||||||||||||||||  | ||||||||||| |         |||||||||| ||||||||||||||||||||||    
T  9481181 tgggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaggatttagattatgtccctgtaatttcatattct 9481280  T
Q  236 tc 237  Q
    ||    
T  9481281 tc 9481282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 137 - 237
Target Start/End: Original strand, 26385277 - 26385378
Alignment:
Q  137 tgggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat-nnnnnnnngatttagattttgtccctgtaatttcatattct 235  Q
    |||||||||||||||||||||| |||||||||||||||||| || ||||||||| | |         ||||||||||||||||||||||||| |||||||    
T  26385277 tgggtaaatacctcttttcgtctctgtaatattagcgaattctggttttagtccatgtagaaaaaaagatttagattttgtccctgtaattttatattct 26385376  T
Q  236 tc 237  Q
    ||    
T  26385377 tc 26385378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 138 - 233
Target Start/End: Original strand, 30617967 - 30618058
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaatttcatatt 233  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||||||| |           ||||||||||||||||||||||||||||||    
T  30617967 gggtaaatacctcttttcgtccctgtaatattagtgaattctgattttagtcctt----taaaaaaatttagattttgtccctgtaatttcatatt 30618058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 141 - 192
Target Start/End: Complemental strand, 26385649 - 26385598
Alignment:
Q  141 taaatacctcttttcgtccctgtaatattagcgaattatgattttagtccct 192  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  26385649 taaatacctcttttcgtccctgtaatattagcgaattccgattttagtccct 26385598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 85
Target Start/End: Complemental strand, 1551228 - 1551167
Alignment:
Q  23 tgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaa 85  Q
    |||||||| |||||||||||||||||||||||||||||| || ||||||||| ||||||||||    
T  1551228 tgaaaataaactcgaagtagaattaaattgattgatgttaga-ttaagaaaagaaaataaaaa 1551167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 138 - 192
Target Start/End: Original strand, 24731935 - 24731989
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccct 192  Q
    ||||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  24731935 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccct 24731989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 190
Target Start/End: Complemental strand, 18500707 - 18500655
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtcc 190  Q
    ||||||||||||||||||||||||||||||||||||||||  | |||||||||    
T  18500707 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtcc 18500655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 24732315 - 24732216
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat-nnnnnnnngatttagattttgtccctgtaatttcatattctt 236  Q
    ||||||||||||||||||||||||||||||||||||||||   | |||||||||| |         |||||||||||||||| |||||||||||||||||    
T  24732315 gggtaaatacctcttttcgtccctgtaatattagcgaatt-ccaatttagtccctgtaaaaaaaaagatttagattttgtccatgtaatttcatattctt 24732217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 26 - 127
Target Start/End: Complemental strand, 18869256 - 18869153
Alignment:
Q  26 aaatagactcgaagtagaattaaa-ttgatt-gatgttggatttaagaaaataaaataaaaagacagtcgctttatttaagatcacggtttattgtaaaa 123  Q
    ||||||||| |||||||||||||| |||||| ||  || |||| |  |||||||||||||||||| ||| ||| ||||||||||| |||||||||| |||    
T  18869256 aaatagacttgaagtagaattaaaattgatttgagatttgattaagaaaaataaaataaaaagacggtcacttgatttaagatcaaggtttattgtgaaa 18869157  T
Q  124 agtt 127  Q
    ||||    
T  18869156 agtt 18869153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 143 - 237
Target Start/End: Original strand, 9154884 - 9154980
Alignment:
Q  143 aatacctcttttcgtccctgtaata-ttagcgaattatgattttagtccctat-nnnnnnnngatttagattttgtccctgtaatttcatattcttc 237  Q
    ||||||||||||| ||||||||||| ||||||||||  ||||||||||||| |         ||||||||||||||||||||||||||| |||||||    
T  9154884 aatacctcttttcctccctgtaatatttagcgaattccgattttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttc 9154980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 192
Target Start/End: Original strand, 10321737 - 10321787
Alignment:
Q  142 aaatacctcttttcgtccctgtaatattagcgaattatgattttagtccct 192  Q
    |||||| |||||||||||||||||||||||||||||  | |||||||||||    
T  10321737 aaatacttcttttcgtccctgtaatattagcgaattccggttttagtccct 10321787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 85
Target Start/End: Complemental strand, 18910214 - 18910130
Alignment:
Q  2 gtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattg-atgttggatttaagaaaataaaataaaaa 85  Q
    |||||| |||||||||||||| |||||| ||||| | |||  ||||||||||||| | ||| |||| | ||||||||||||||||    
T  18910214 gtttgtattttttaatttaaaagaaaatggactcaaggtatgattaaattgattgaaagtttgattcaggaaaataaaataaaaa 18910130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 127
Target Start/End: Complemental strand, 27643439 - 27643383
Alignment:
Q  71 aaaataaaataaaaagacagtcgctttatttaagatcacggtttattgtaaaaagtt 127  Q
    |||||||||||||||||| ||| ||| ||||||||||| |||||||| | |||||||    
T  27643439 aaaataaaataaaaagacggtcacttgatttaagatcaaggtttattttgaaaagtt 27643383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 127
Target Start/End: Complemental strand, 30116258 - 30116202
Alignment:
Q  71 aaaataaaataaaaagacagtcgctttatttaagatcacggtttattgtaaaaagtt 127  Q
    |||||||||||| ||||| ||| ||| ||||||||||| |||||||||| |||||||    
T  30116258 aaaataaaataagaagacggtcacttgatttaagatcaaggtttattgtgaaaagtt 30116202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 177
Target Start/End: Complemental strand, 2299691 - 2299652
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaatt 177  Q
    ||||||||| |||||||||| |||||||||||||||||||    
T  2299691 gggtaaatatctcttttcgttcctgtaatattagcgaatt 2299652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 177
Target Start/End: Original strand, 19284130 - 19284168
Alignment:
Q  139 ggtaaatacctcttttcgtccctgtaatattagcgaatt 177  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  19284130 ggtaaatacctcttttcgttcatgtaatattagcgaatt 19284168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Original strand, 19284195 - 19284229
Alignment:
Q  203 gatttagattttgtccctgtaatttcatattcttc 237  Q
    ||||||||||||||||||||||||||| |||||||    
T  19284195 gatttagattttgtccctgtaatttcagattcttc 19284229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Original strand, 33714553 - 33714587
Alignment:
Q  203 gatttagattttgtccctgtaatttcatattcttc 237  Q
    |||||||||||||||| ||||||||||||||||||    
T  33714553 gatttagattttgtccttgtaatttcatattcttc 33714587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 133
Target Start/End: Complemental strand, 8277134 - 8277005
Alignment:
Q  2 gtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaa-gacagtcgctttatt 100  Q
    ||||||||||||||  ||||| ||||   ||||| ||||| | |||||||||||||| || || | |||||||||||||||||| |||  || ||| |||    
T  8277134 gtttgtgtttttta--ttaaaagaaagatgactcaaagtatagttaaattgattgatatttgact-aagaaaataaaataaaaaggacgatcacttgatt 8277038  T
Q  101 taagatcacggtttattgtaaaaagttttttgt 133  Q
    || ||||| |||||||| ||||||  |||||||    
T  8277037 taggatcaaggtttattataaaaatatttttgt 8277005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 9854198 - 9854165
Alignment:
Q  204 atttagattttgtccctgtaatttcatattcttc 237  Q
    ||||||||||||||| ||||||||||||||||||    
T  9854198 atttagattttgtccttgtaatttcatattcttc 9854165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 85
Target Start/End: Original strand, 3916520 - 3916579
Alignment:
Q  25 aaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaa 85  Q
    |||| ||||| |||||| | ||||||||||||| ||| |||| ||||||||||||||||||    
T  3916520 aaaagagacttgaagtaaagttaaattgattgaagtttgatt-aagaaaataaaataaaaa 3916579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 30435694 - 30435776
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaa 85  Q
    ||||||||||||||| |||||   || ||| ||||||||||  ||||||||||||||| || || ||||||||||||||| ||||    
T  30435694 tgtttgtgttttttattttaagaaaagata-actcgaagtatgattaaattgattgatatttga-ttaagaaaataaaatgaaaa 30435776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 177
Target Start/End: Original strand, 30458903 - 30458939
Alignment:
Q  141 taaatacctcttttcgtccctgtaatattagcgaatt 177  Q
    ||||||| ||||||||||||||||||||||| |||||    
T  30458903 taaatacatcttttcgtccctgtaatattagtgaatt 30458939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 177
Target Start/End: Original strand, 33714494 - 33714522
Alignment:
Q  149 tcttttcgtccctgtaatattagcgaatt 177  Q
    |||||||||||||||||||||||||||||    
T  33714494 tcttttcgtccctgtaatattagcgaatt 33714522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 3e-26; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 827497 - 827374
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaat-aaaaagacagtcgctttat 99  Q
    |||||||| ||||||||||||| |||||| |||| ||||||||||||| ||||||||  || || ||||||||||||||| |||||||| ||| ||| ||    
T  827497 tgtttgtggtttttaatttaaaagaaaatggacttgaagtagaattaagttgattgaaatttga-ttaagaaaataaaataaaaaagacggtcacttgat 827399  T
Q  100 ttaagatcacggtttattgtaaaaa 124  Q
    ||||||||| |||||||||||||||    
T  827398 ttaagatcaaggtttattgtaaaaa 827374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 829508 - 829385
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaat-aaaaagacagtcgctttat 99  Q
    |||||||| ||||||||||||| |||||| |||| ||||||||||||| ||||||||  || || ||||||||||||||| |||||||| ||| ||| ||    
T  829508 tgtttgtggtttttaatttaaaagaaaatggacttgaagtagaattaagttgattgaaatttga-ttaagaaaataaaataaaaaagacggtcacttgat 829410  T
Q  100 ttaagatcacggtttattgtaaaaa 124  Q
    ||||||||| |||||||||||||||    
T  829409 ttaagatcaaggtttattgtaaaaa 829385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 839308 - 839185
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaat-aaaaagacagtcgctttat 99  Q
    |||||||| ||||||||||||| |||||| |||| ||||||||||||| ||||||||  || || ||||||||||||||| |||||||| ||| ||| ||    
T  839308 tgtttgtggtttttaatttaaaagaaaatggacttgaagtagaattaagttgattgaaatttga-ttaagaaaataaaataaaaaagacggtcacttgat 839210  T
Q  100 ttaagatcacggtttattgtaaaaa 124  Q
    ||||||||| |||||||||||||||    
T  839209 ttaagatcaaggtttattgtaaaaa 839185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 1204488 - 1204365
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaat-aaaaagacagtcgctttat 99  Q
    |||||||| ||||||||||||| |||||| |||| ||||||||||||| ||||||||  || || ||||||||||||||| |||||||| ||| ||| ||    
T  1204488 tgtttgtggtttttaatttaaaagaaaatggacttgaagtagaattaagttgattgaaatttga-ttaagaaaataaaataaaaaagacggtcacttgat 1204390  T
Q  100 ttaagatcacggtttattgtaaaaa 124  Q
    ||||||||| |||||||||||||||    
T  1204389 ttaagatcaaggtttattgtaaaaa 1204365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 8955174 - 8955050
Alignment:
Q  1 tgtttgtgtttttt-aatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaat-aaaaagacagtcgcttta 98  Q
    |||||||||||||| |||||||| |||||| |||| ||||||||||||| ||||||||  || || ||||||||||||||| |||||||||||  ||| |    
T  8955174 tgtttgtgtttttttaatttaaaagaaaatggacttgaagtagaattaagttgattgaaatttga-ttaagaaaataaaataaaaaagacagttacttga 8955076  T
Q  99 tttaagatcacggtttattgtaaaaa 124  Q
    |||||||||| |||||||||||||||    
T  8955075 tttaagatcaaggtttattgtaaaaa 8955050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 23383878 - 23383778
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccct-atnnnnnnnngatttagattttgtccctgtaatttcatattctt 236  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |         ||||||||||||||||||||||||||||||||||    
T  23383878 gggtaaatacctcttttcgtccctgtaatattagtgaattctgattttagtccctgaaaaaaaaaagatttagattttgtccctgtaatttcatattctt 23383779  T
Q  237 c 237  Q
    |    
T  23383778 c 23383778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 23705038 - 23704939
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaatttcatattcttc 237  Q
    ||||||||||||||||||||| ||||||||||||||||||  | ||||||||||| |        |||||||||||||||||||||||||||||||||||    
T  23705038 gggtaaatacctcttttcgtctctgtaatattagcgaattccggttttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcatattcttc 23704939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 133 - 237
Target Start/End: Original strand, 20419531 - 20419636
Alignment:
Q  133 ttattgggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat-nnnnnnnngatttagattttgtccctgtaatttcata 231  Q
    ||||||||||||||||||||||||||||| |||||||||||||||  | ||||||||||| |         |||||||||||||||||||||||||||||    
T  20419531 ttattgggtaaatacctcttttcgtccctataatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcata 20419630  T
Q  232 ttcttc 237  Q
    ||||||    
T  20419631 ttcttc 20419636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 846484 - 846361
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaat-aaaaagacagtcgctttat 99  Q
    |||||||| ||||||||||||| |||| | |||| ||||||||||||| ||||||||  || || ||||||||||||||| |||||||| ||| ||| ||    
T  846484 tgtttgtggtttttaatttaaaagaaagtggacttgaagtagaattaagttgattgaaatttga-ttaagaaaataaaataaaaaagacggtcacttgat 846386  T
Q  100 ttaagatcacggtttattgtaaaaa 124  Q
    |||||||||  ||||||||||||||    
T  846385 ttaagatcaaagtttattgtaaaaa 846361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 853861 - 853738
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaat-aaaaagacagtcgctttat 99  Q
    |||||||| ||||||||||||| |||| | |||| ||||||||||||| ||||||||  || || ||||||||||||||| |||||||| ||| ||| ||    
T  853861 tgtttgtggtttttaatttaaaagaaagtggacttgaagtagaattaagttgattgaaatttga-ttaagaaaataaaataaaaaagacggtcacttgat 853763  T
Q  100 ttaagatcacggtttattgtaaaaa 124  Q
    |||||||||  ||||||||||||||    
T  853762 ttaagatcaaagtttattgtaaaaa 853738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 1211865 - 1211742
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaat-aaaaagacagtcgctttat 99  Q
    |||||||| ||||||||||||| |||| | |||| ||||||||||||| ||||||||  || || ||||||||||||||| |||||||| ||| ||| ||    
T  1211865 tgtttgtggtttttaatttaaaagaaagtggacttgaagtagaattaagttgattgaaatttga-ttaagaaaataaaataaaaaagacggtcacttgat 1211767  T
Q  100 ttaagatcacggtttattgtaaaaa 124  Q
    |||||||||  ||||||||||||||    
T  1211766 ttaagatcaaagtttattgtaaaaa 1211742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 5647505 - 5647586
Alignment:
Q  3 tttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaag 86  Q
    ||||||||||||||||||||||||||||||||| ||||| | |||||||||||||| || || |||||||||||||||||||||    
T  5647505 tttgtgttttttaatttaaatgaaaatagactc-aagtatagttaaattgattgatatttga-ttaagaaaataaaataaaaag 5647586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 138 - 237
Target Start/End: Original strand, 12006541 - 12006640
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaatttcatattcttc 237  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |         | |||||||||||||||||||||||| |||||||    
T  12006541 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaaaaaattagattttgtccctgtaatttcagattcttc 12006640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 138 - 237
Target Start/End: Original strand, 25772364 - 25772463
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaatttcatattcttc 237  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||  || |        |||||||||||||||| ||||||||||||||||||    
T  25772364 gggtaaatacctcttttcgtccctgtaatattagcgaatttcgattttagtttctgtaaaaaaaagatttagattttgtccttgtaatttcatattcttc 25772463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 136 - 190
Target Start/End: Complemental strand, 24195252 - 24195198
Alignment:
Q  136 ttgggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtcc 190  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  24195252 ttgggtaaatacctcttttcgtccctgtaatattagcgaattctgattttagtcc 24195198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 28218541 - 28218441
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat-nnnnnnnngatttagattttgtccctgtaatttcatattctt 236  Q
    ||||||||||||||||||||||||||||||||||||||||  | ||||||||||| |         ||||||||||||||||||||||||||| ||||||    
T  28218541 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattctt 28218442  T
Q  237 c 237  Q
    |    
T  28218441 c 28218441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 136 - 237
Target Start/End: Original strand, 38879721 - 38879824
Alignment:
Q  136 ttgggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccc--tatnnnnnnnngatttagattttgtccctgtaatttcatatt 233  Q
    ||||||||||||||||||||||||||||||||||||||||||   |||||||| ||  ||         |||||||||||||||||||||||||||||||    
T  38879721 ttgggtaaatacctcttttcgtccctgtaatattagcgaattccaattttagttcctgtaaaaaaaaaagatttagattttgtccctgtaatttcatatt 38879820  T
Q  234 cttc 237  Q
    ||||    
T  38879821 cttc 38879824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 138 - 237
Target Start/End: Original strand, 28218178 - 28218279
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccc--tatnnnnnnnngatttagattttgtccctgtaatttcatattct 235  Q
    ||||||||||||||||||||||||||||||||||||||||  | ||||||||||  ||         ||||||||||||||||||||||||||| |||||    
T  28218178 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattct 28218277  T
Q  236 tc 237  Q
    ||    
T  28218278 tc 28218279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 136 - 237
Target Start/End: Original strand, 16995198 - 16995299
Alignment:
Q  136 ttgggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaatttcatattct 235  Q
    ||||||||||||||||||||||| ||||||||||||||||||  | ||||||| ||| |         |||||||||||||||||||||||||| |||||    
T  16995198 ttgggtaaatacctcttttcgtctctgtaatattagcgaatttcggttttagttcctgtaaaaaaaatatttagattttgtccctgtaatttcagattct 16995297  T
Q  236 tc 237  Q
    ||    
T  16995298 tc 16995299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 12006918 - 12006818
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat-nnnnnnnngatttagattttgtccctgtaatttcatattctt 236  Q
    |||||||||||||||||||| | |||||||||||||||||  ||||||||||||| |         ||||||||||||||||||||||||||| ||||||    
T  12006918 gggtaaatacctcttttcgttcatgtaatattagcgaattccgattttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattctt 12006819  T
Q  237 c 237  Q
    |    
T  12006818 c 12006818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 41600336 - 41600236
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat-nnnnnnnngatttagattttgtccctgtaatttcatattctt 236  Q
    ||||||||||||||||| ||||||||||||||||||||||  | ||||||||||| |         ||||||||||||||||||||||||||| ||||||    
T  41600336 gggtaaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattctt 41600237  T
Q  237 c 237  Q
    |    
T  41600236 c 41600236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 10409751 - 10409652
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaatttcatattcttc 237  Q
    |||||||||||||||||| ||| |||||||||||||||||  ||||||||||||| |        ||||||||||||||| ||||||||| | |||||||    
T  10409751 gggtaaatacctcttttcatccatgtaatattagcgaattccgattttagtccctgtaaaaaaaagatttagattttgtctctgtaattttagattcttc 10409652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 138 - 237
Target Start/End: Original strand, 23704662 - 23704761
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaatttcatattcttc 237  Q
    ||||||||||||||||||||||||||||||||||||||||  | ||||| || || |        |||||| |||||||||||||||||||| |||||||    
T  23704662 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttactcactgtaaaaaaaagatttacattttgtccctgtaatttcagattcttc 23704761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 242
Target Start/End: Original strand, 41599956 - 41600063
Alignment:
Q  136 ttgggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat-nnnnnnnngatttagattttgtccctgtaatttcatattc 234  Q
    |||||||||||||||||||| |||||||||||||||||||||  | ||||||||| |||          |||||||||||||||||||||||||| ||||    
T  41599956 ttgggtaaatacctcttttcatccctgtaatattagcgaatttcggttttagtccatataaaaaaaaatatttagattttgtccctgtaatttcagattc 41600055  T
Q  235 ttcgacat 242  Q
    ||| ||||    
T  41600056 ttccacat 41600063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 126 - 229
Target Start/End: Original strand, 48648250 - 48648353
Alignment:
Q  126 ttttttgttattgggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaat 225  Q
    |||||| || || |||||||| ||||||||||||||||||||| ||||||||  ||||||||||| | |        |||||||||||||||||||||||    
T  48648250 tttttttttttttggtaaatatctcttttcgtccctgtaatatcagcgaatttcgattttagtccatgtaagaaaaagatttagattttgtccctgtaat 48648349  T
Q  226 ttca 229  Q
    ||||    
T  48648350 ttca 48648353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 85
Target Start/End: Original strand, 15765147 - 15765208
Alignment:
Q  23 tgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaa 85  Q
    |||||||| |||||||||||||||||||||||||||||| || ||||||||| ||||||||||    
T  15765147 tgaaaataaactcgaagtagaattaaattgattgatgttaga-ttaagaaaagaaaataaaaa 15765208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 134 - 237
Target Start/End: Complemental strand, 20419919 - 20419814
Alignment:
Q  134 tattgggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccc--tatnnnnnnnngatttagattttgtccctgtaatttcata 231  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||  | ||||||||||  ||         ||||||||||||||||||||||||||| |    
T  20419919 tattgggtaaatacctctttttgtccctgtaatattaacgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcaga 20419820  T
Q  232 ttcttc 237  Q
    ||||||    
T  20419819 ttcttc 20419814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 138 - 236
Target Start/End: Complemental strand, 20963871 - 20963773
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaatttcatattctt 236  Q
    ||||||||||||||||| ||||||||||||||||||||||  | ||||||||||| |         |||||||||| ||||||||||||||| ||||||    
T  20963871 gggtaaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaaaataaaatttagatttagtccctgtaatttcagattctt 20963773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 48672657 - 48672557
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat-nnnnnnnngatttagattttgtccctgtaatttcatattctt 236  Q
    ||||||||||||||||||||| ||||||||||||||||||  | ||||||||||| |         |||||||||||| |||||||||||||| ||||||    
T  48672657 gggtaaatacctcttttcgtctctgtaatattagcgaatttcggttttagtccctgtaaataaaaagatttagattttatccctgtaatttcagattctt 48672558  T
Q  237 c 237  Q
    |    
T  48672557 c 48672557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 137 - 237
Target Start/End: Original strand, 23383498 - 23383600
Alignment:
Q  137 tgggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat--nnnnnnnngatttagattttgtccctgtaatttcatattc 234  Q
    ||||||||||| |||||||||| |||||||||||| |||||  | |||||||||||||          |||||||||||||||||| |||||||||||||    
T  23383498 tgggtaaatacttcttttcgtctctgtaatattagtgaattccggttttagtccctataaaaaaaaaagatttagattttgtccctataatttcatattc 23383597  T
Q  235 ttc 237  Q
    |||    
T  23383598 ttc 23383600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 85
Target Start/End: Complemental strand, 4851016 - 4850962
Alignment:
Q  31 gactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaa 85  Q
    ||||| ||||| |||||||||||||||| || |||||||||||||||||||||||    
T  4851016 gactcaaagtataattaaattgattgatatttgatttaagaaaataaaataaaaa 4850962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 237
Target Start/End: Complemental strand, 38880100 - 38880002
Alignment:
Q  137 tgggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaatttcatattctt 236  Q
    |||||||||||||||||||||||||||||||||||| ||||  | |||||||  || |         |||||||||||||||||||||||||| ||||||    
T  38880100 tgggtaaatacctcttttcgtccctgtaatattagcaaattccggttttagt--ctttaaaaaaaaaatttagattttgtccctgtaatttcagattctt 38880003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 127
Target Start/End: Original strand, 16280875 - 16280931
Alignment:
Q  71 aaaataaaataaaaagacagtcgctttatttaagatcacggtttattgtaaaaagtt 127  Q
    |||||||||||||||||| ||| ||| ||||||||||| |||||||||| |||||||    
T  16280875 aaaataaaataaaaagacggtcacttgatttaagatcaaggtttattgtgaaaagtt 16280931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 127
Target Start/End: Original strand, 16295077 - 16295133
Alignment:
Q  71 aaaataaaataaaaagacagtcgctttatttaagatcacggtttattgtaaaaagtt 127  Q
    |||||||||||||||||| ||| ||| ||||||||||| |||||||||| |||||||    
T  16295077 aaaataaaataaaaagacggtcacttgatttaagatcaaggtttattgtgaaaagtt 16295133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 237
Target Start/End: Original strand, 20458692 - 20458791
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaatttcatattcttc 237  Q
    |||||||||| | |||||||||||||||||||| ||||||  | ||||||||||| |         |||||||||||||| ||||||||||| |||||||    
T  20458692 gggtaaatacattttttcgtccctgtaatattaacgaattccggttttagtccctgtaaataaaaaatttagattttgtcgctgtaatttcagattcttc 20458791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 177
Target Start/End: Complemental strand, 20459068 - 20459029
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaatt 177  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  20459068 gggtaaatacctcttttcgtccctgtaatattagggaatt 20459029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 177
Target Start/End: Complemental strand, 33162914 - 33162875
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaatt 177  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  33162914 gggtaaatacctcttttcgtctctgtaatattagcgaatt 33162875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 177
Target Start/End: Original strand, 48672277 - 48672316
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaatt 177  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  48672277 gggtaaatacctcttttcgtccctgtaatattagtgaatt 48672316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 139 - 177
Target Start/End: Complemental strand, 7658342 - 7658304
Alignment:
Q  139 ggtaaatacctcttttcgtccctgtaatattagcgaatt 177  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  7658342 ggtaaatacctcttttcgtccctgtaatattaacgaatt 7658304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 194
Target Start/End: Complemental strand, 48648603 - 48648549
Alignment:
Q  140 gtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat 194  Q
    |||||||| |||||||||||| ||||||||||||||||  |||||||||| ||||    
T  48648603 gtaaatacttcttttcgtcccagtaatattagcgaatttcgattttagtctctat 48648549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 124
Target Start/End: Complemental strand, 12585414 - 12585361
Alignment:
Q  71 aaaataaaataaaaagacagtcgctttatttaagatcacggtttattgtaaaaa 124  Q
    |||||||||||||||||| ||| ||| ||||||||||| |||||||||| ||||    
T  12585414 aaaataaaataaaaagacggtcacttgatttaagatcaaggtttattgtgaaaa 12585361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 124
Target Start/End: Complemental strand, 12595188 - 12595135
Alignment:
Q  71 aaaataaaataaaaagacagtcgctttatttaagatcacggtttattgtaaaaa 124  Q
    |||||||||||||||||| ||| ||| ||||||||||| |||||||||| ||||    
T  12595188 aaaataaaataaaaagacggtcacttgatttaagatcaaggtttattgtgaaaa 12595135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 35076893 - 35076816
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaa 78  Q
    ||||||||||||||||| | || ||||||||||||    || ||||| ||||||| ||||| ||||||||||||||||    
T  35076893 tgtttgtgttttttaatattaaagaaaatagactcatgataaaattagattgattaatgtttgatttaagaaaataaa 35076816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 35091416 - 35091339
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaa 78  Q
    ||||||||||||||||| | || ||||||||||||    || ||||| ||||||| ||||| ||||||||||||||||    
T  35091416 tgtttgtgttttttaatattaaagaaaatagactcatgataaaattagattgattaatgtttgatttaagaaaataaa 35091339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 177
Target Start/End: Original strand, 7657972 - 7658008
Alignment:
Q  141 taaatacctcttttcgtccctgtaatattagcgaatt 177  Q
    ||||||||||||||||||| |||||||||||||||||    
T  7657972 taaatacctcttttcgtccatgtaatattagcgaatt 7658008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 25772709 - 25772609
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnn-gatttagattttgtccctgtaatttcatattctt 236  Q
    ||||||||| |||||||||||||| ||||||||| |||||    ||||||||||| |         ||||||||||||||||||||||||||| ||||||    
T  25772709 gggtaaatatctcttttcgtccctataatattagtgaattccagttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattctt 25772610  T
Q  237 c 237  Q
    |    
T  25772609 c 25772609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 192
Target Start/End: Original strand, 6465854 - 6465909
Alignment:
Q  137 tgggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccct 192  Q
    |||||||||| || ||||||||| |||||||||||||||||  | |||||||||||    
T  6465854 tgggtaaatatcttttttcgtccatgtaatattagcgaattccggttttagtccct 6465909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 20541870 - 20541925
Alignment:
Q  2 gtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattga 57  Q
    |||||| |||||||||||||| |||||| ||||||| |||  ||||||||||||||    
T  20541870 gtttgtattttttaatttaaaagaaaatggactcgaggtatgattaaattgattga 20541925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 206 - 237
Target Start/End: Complemental strand, 31851548 - 31851517
Alignment:
Q  206 ttagattttgtccctgtaatttcatattcttc 237  Q
    ||||||||||||||||||||||||||||||||    
T  31851548 ttagattttgtccctgtaatttcatattcttc 31851517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 177
Target Start/End: Complemental strand, 31852208 - 31852169
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaatt 177  Q
    |||| |||||||||||||||||||||||||||| ||||||    
T  31852208 gggttaatacctcttttcgtccctgtaatattaacgaatt 31852169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Complemental strand, 1250518 - 1250484
Alignment:
Q  203 gatttagattttgtccctgtaatttcatattcttc 237  Q
    |||||||||||||||||| ||||||||||||||||    
T  1250518 gatttagattttgtccctttaatttcatattcttc 1250484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 117
Target Start/End: Original strand, 4889633 - 4889679
Alignment:
Q  71 aaaataaaataaaaagacagtcgctttatttaagatcacggtttatt 117  Q
    |||||||||||||||||| ||| ||| ||||||||||| ||||||||    
T  4889633 aaaataaaataaaaagacggtcacttgatttaagatcaaggtttatt 4889679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 124
Target Start/End: Original strand, 7342319 - 7342377
Alignment:
Q  66 ttaagaaaataaaataaaaagacagtcgctttatttaagatcacggtttattgtaaaaa 124  Q
    ||||||||| |||| |||||||| ||| ||| ||||||||||| |||||||||| ||||    
T  7342319 ttaagaaaaaaaaaaaaaaagacggtcacttgatttaagatcaaggtttattgtgaaaa 7342377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 192
Target Start/End: Original strand, 20963494 - 20963548
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccct 192  Q
    ||||||||| || ||||||||||||||||||||| ||||| |  |||||||||||    
T  20963494 gggtaaatatctattttcgtccctgtaatattagtgaattctagttttagtccct 20963548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Complemental strand, 24195108 - 24195074
Alignment:
Q  203 gatttagattttgtccctgtaatttcatattcttc 237  Q
    |||||||||||||||| ||||||||||||||||||    
T  24195108 gatttagattttgtccttgtaatttcatattcttc 24195074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 8811542 - 8811450
Alignment:
Q  32 actcgaagtagaattaaattgattgatgttggatttaagaaaataaaat-aaaaagacagtcgctttatttaagatcacggtttattgtaaaaa 124  Q
    ||||||||||  ||||||||||||||| || || ||||||||||||||| |||||||   || ||| ||||| ||||| |||||||| ||||||    
T  8811542 actcgaagtatgattaaattgattgatatttga-ttaagaaaataaaatgaaaaagatgatcacttgatttaggatcaaggtttattataaaaa 8811450  T

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Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 8819356 - 8819264
Alignment:
Q  32 actcgaagtagaattaaattgattgatgttggatttaagaaaataaaat-aaaaagacagtcgctttatttaagatcacggtttattgtaaaaa 124  Q
    ||||||||||  ||||||||||||||| || || ||||||||||||||| |||||||   || ||| ||||| ||||| |||||||| ||||||    
T  8819356 actcgaagtatgattaaattgattgatatttga-ttaagaaaataaaatgaaaaagatgatcacttgatttaggatcaaggtttattataaaaa 8819264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 188
Target Start/End: Original strand, 31851242 - 31851291
Alignment:
Q  139 ggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagt 188  Q
    ||||||||||||||||||||| | ||||||||| |||||  |||||||||    
T  31851242 ggtaaatacctcttttcgtccttttaatattagtgaatttcgattttagt 31851291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 177
Target Start/End: Original strand, 44816832 - 44816872
Alignment:
Q  139 ggtaaatacctcttttc--gtccctgtaatattagcgaatt 177  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  44816832 ggtaaatacctcttttctcgtccctgtaatattagcgaatt 44816872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 1e-25; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 138 - 237
Target Start/End: Original strand, 14143902 - 14144001
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaatttcatattcttc 237  Q
    ||||||||||||||||||||||||||||||||||||||||  | ||||||||||| |        |||||||||||||||||||||||||||||||||||    
T  14143902 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcatattcttc 14144001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 26870180 - 26870058
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaagacagtcgctttatt 100  Q
    |||||||| ||||||||||||| |||||| |||| ||||||||||||| ||||||||  || || ||||||||||||||||||||||| ||| ||| |||    
T  26870180 tgtttgtggtttttaatttaaaagaaaatggacttgaagtagaattaagttgattgaaatttga-ttaagaaaataaaataaaaagacggtcacttgatt 26870082  T
Q  101 taagatcacggtttattgtaaaaa 124  Q
    || ||||| |||||||| ||||||    
T  26870081 taggatcaaggtttattataaaaa 26870058  T

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Target: chr5; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 15778149 - 15778230
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaa 83  Q
    |||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||| || ||||||||| ||||||||    
T  15778149 tgtttgtgttttttaatttaaatgaaaataaactcaaggtagaattaaattgattgatgtttga-ttaagaaaagaaaataaa 15778230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 15792384 - 15792465
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaa 83  Q
    |||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||| || ||||||||| ||||||||    
T  15792384 tgtttgtgttttttaatttaaatgaaaataaactcaaggtagaattaaattgattgatgtttga-ttaagaaaagaaaataaa 15792465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 21826450 - 21826567
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaagacagtcgctttatt 100  Q
    |||||||||||||||||||||| |||||| |||| ||||||||||||| ||||||||  || ||||      || ||||||||||||| ||| ||| |||    
T  21826450 tgtttgtgttttttaatttaaaagaaaatggacttgaagtagaattaagttgattgaaatttgatt------aagaaaataaaaagacggtcacttgatt 21826543  T
Q  101 taagatcacggtttattgtaaaaa 124  Q
    |||||||| |||||||||||||||    
T  21826544 taagatcaaggtttattgtaaaaa 21826567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 126 - 237
Target Start/End: Complemental strand, 23979291 - 23979179
Alignment:
Q  126 ttttttgttattgggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat-nnnnnnnngatttagattttgtccctgtaa 224  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||||  | ||||||||||| |         ||||||||||||||||||||||    
T  23979291 ttttttatttttgggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaa 23979192  T
Q  225 tttcatattcttc 237  Q
    ||||| |||||||    
T  23979191 tttcaaattcttc 23979179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 20709589 - 20709490
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaatttcatattcttc 237  Q
    |||| ||||||||||||||||| |||||||||| |||||| || ||||||||||| |        |||||||||||||||| ||||||||||||||||||    
T  20709589 gggttaatacctcttttcgtccatgtaatattaacgaattttggttttagtccctgtaaaaaaaagatttagattttgtccatgtaatttcatattcttc 20709490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 143 - 237
Target Start/End: Original strand, 7125923 - 7126017
Alignment:
Q  143 aatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaatttcatattcttc 237  Q
    ||||||||||||||| |||||||||||||||||||  ||||||||||||| |        |||||||||||||||||| |||||||| |||||||    
T  7125923 aatacctcttttcgttcctgtaatattagcgaattccgattttagtccctgtaaaaaaaagatttagattttgtccctataatttcagattcttc 7126017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 135 - 237
Target Start/End: Original strand, 18336464 - 18336568
Alignment:
Q  135 attgggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccc--tatnnnnnnnngatttagattttgtccctgtaatttcatat 232  Q
    |||||||||||| |||||||||||||| |||||||||||||||  ||||||||||||  ||         ||||||||||||||||||||||||||| ||    
T  18336464 attgggtaaatatctcttttcgtccctataatattagcgaattccgattttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagat 18336563  T
Q  233 tcttc 237  Q
    |||||    
T  18336564 tcttc 18336568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 138 - 237
Target Start/End: Original strand, 24837169 - 24837269
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat-nnnnnnnngatttagattttgtccctgtaatttcatattctt 236  Q
    |||||||||||||||||||||||||||||| |||||||||  | ||||||||||| |         |||||||||||||||| |||||||||||||||||    
T  24837169 gggtaaatacctcttttcgtccctgtaataatagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccttgtaatttcatattctt 24837268  T
Q  237 c 237  Q
    |    
T  24837269 c 24837269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 24837547 - 24837447
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat-nnnnnnnngatttagattttgtccctgtaatttcatattctt 236  Q
    ||||||||||||||||||||||||||||||||||||||||    ||||||||||| |         ||||||||||||||||||||||||||| ||||||    
T  24837547 gggtaaatacctcttttcgtccctgtaatattagcgaattccagttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcaaattctt 24837448  T
Q  237 c 237  Q
    |    
T  24837447 c 24837447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 138 - 237
Target Start/End: Original strand, 17762283 - 17762382
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaatttcatattcttc 237  Q
    ||||||||||||||||| ||||||||||||||||||||||  | ||||||||||| |        |||||| ||||||| |||||||||||| |||||||    
T  17762283 gggtaaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaagatttatattttgttcctgtaatttcagattcttc 17762382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 138 - 229
Target Start/End: Original strand, 30512288 - 30512379
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaatttca 229  Q
    ||||||||| |||||||||||||||||||||||| ||||| || ||||||||||| |        ||||||||||| |||||||||||||||    
T  30512288 gggtaaatatctcttttcgtccctgtaatattagtgaattttggttttagtccctgtaaaaaaaggatttagatttggtccctgtaatttca 30512379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 138 - 229
Target Start/End: Original strand, 30552628 - 30552719
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaatttca 229  Q
    ||||||||| |||||||||||||||||||||||| ||||| || ||||||||||| |        ||||||||||| |||||||||||||||    
T  30552628 gggtaaatatctcttttcgtccctgtaatattagtgaattttggttttagtccctgtaaaaaaaggatttagatttggtccctgtaatttca 30552719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 138 - 192
Target Start/End: Original strand, 14411697 - 14411751
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccct 192  Q
    ||||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  14411697 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccct 14411751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 138 - 192
Target Start/End: Complemental strand, 17762660 - 17762606
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccct 192  Q
    ||||||||||||||||||||||||||| |||||||||||| || |||||||||||    
T  17762660 gggtaaatacctcttttcgtccctgtagtattagcgaattctggttttagtccct 17762606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 136 - 237
Target Start/End: Complemental strand, 18336835 - 18336734
Alignment:
Q  136 ttgggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat-nnnnnnnngatttagattttgtccctgtaatttcatattc 234  Q
    |||||||||||||||||||||||||||||| |||||||||||  | ||||||||||| |         ||||||||||||||||||||||||||| ||||    
T  18336835 ttgggtaaatacctcttttcgtccctgtaa-attagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattc 18336737  T
Q  235 ttc 237  Q
    |||    
T  18336736 ttc 18336734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 139 - 237
Target Start/End: Complemental strand, 41001729 - 41001631
Alignment:
Q  139 ggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaatttcatattcttc 237  Q
    ||||||||||| |||||||||||||||||||||||||||  | ||||||||| | |        |||||||||||||||||| |||||||| |||||||    
T  41001729 ggtaaataccttttttcgtccctgtaatattagcgaattccggttttagtccttgtaaaaaaaagatttagattttgtccctataatttcagattcttc 41001631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 22958100 - 22958212
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaagacagtcgctttatt 100  Q
    |||||||||| ||||||||||||||||||  ||| ||||||||||||| |||| |||  || || ||||| |||||||||||||||||  || ||| |||    
T  22958100 tgtttgtgttctttaatttaaatgaaaatgaacttgaagtagaattaagttgactgaaatttga-ttaaggaaataaaataaaaagacgatcacttgatt 22958198  T
Q  101 taagatcacggttt 114  Q
    || ||||| |||||    
T  22958199 taggatcaaggttt 22958212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 137 - 237
Target Start/End: Original strand, 29444805 - 29444906
Alignment:
Q  137 tgggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat-nnnnnnnngatttagattttgtccctgtaatttcatattct 235  Q
    |||| ||||| ||||||||||||||||||||||| |||||| |||||||||||||| |         |||||||||| ||||| ||||||||||||||||    
T  29444805 tggggaaatatctcttttcgtccctgtaatattaacgaattctgattttagtccctgtaaaaaaaaggatttagattatgtccttgtaatttcatattct 29444904  T
Q  236 tc 237  Q
    ||    
T  29444905 tc 29444906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 137 - 237
Target Start/End: Original strand, 31799639 - 31799740
Alignment:
Q  137 tgggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat-nnnnnnnngatttagattttgtccctgtaatttcatattct 235  Q
    ||||||||||||||||||||||||| |||||||||||||||  | ||| ||||||| |         ||||||||||||||||||||||||||| |||||    
T  31799639 tgggtaaatacctcttttcgtccctataatattagcgaattccggtttcagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattct 31799738  T
Q  236 tc 237  Q
    ||    
T  31799739 tc 31799740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 7126295 - 7126195
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat-nnnnnnnngatttagattttgtccctgtaatttcatattctt 236  Q
    |||||||||||||||||| |||||||||||||||||||||  | ||||||||  | |         ||||||||||||||||||||||||||||||||||    
T  7126295 gggtaaatacctcttttcatccctgtaatattagcgaattccggttttagtctttgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 7126196  T
Q  237 c 237  Q
    |    
T  7126195 c 7126195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 14144279 - 14144179
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat-nnnnnnnngatttagattttgtccctgtaatttcatattctt 236  Q
    |||| |||||||||||||||| ||||||||||| ||||||  ||||||||||||| |         ||||||||||||||||||||||||||| ||||||    
T  14144279 gggttaatacctcttttcgtcactgtaatattaacgaattccgattttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcaaattctt 14144180  T
Q  237 c 237  Q
    |    
T  14144179 c 14144179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 237
Target Start/End: Original strand, 24074303 - 24074403
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat-nnnnnnnngatttagattttgtccctgtaatttcatattctt 236  Q
    |||||||||||||||||||||| |||||||||||||||||  | ||||||||||| |          |||||||||||||| ||||||||||||||||||    
T  24074303 gggtaaatacctcttttcgtccatgtaatattagcgaatttcggttttagtccctgtaaaaaaaaatatttagattttgtctctgtaatttcatattctt 24074402  T
Q  237 c 237  Q
    |    
T  24074403 c 24074403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 138 - 237
Target Start/End: Original strand, 6817123 - 6817222
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaatttcatattcttc 237  Q
    |||||||||||||||||||||| ||||||||||| |||||  | ||||||||||| |        |||||||||| ||||| |||||||||| |||||||    
T  6817123 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgtaaaaaaaagatttagattatgtccatgtaatttcagattcttc 6817222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 138 - 237
Target Start/End: Original strand, 4918989 - 4919090
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnn--gatttagattttgtccctgtaatttcatattct 235  Q
    |||||||||||||||||| || ||||||||||||||||||  | ||||||| ||| |          |||||||||||||||||||||||||||||||||    
T  4918989 gggtaaatacctcttttcatctctgtaatattagcgaatttcggttttagttcctgtaaaaaaaaaagatttagattttgtccctgtaatttcatattct 4919088  T
Q  236 tc 237  Q
    ||    
T  4919089 tc 4919090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 138 - 190
Target Start/End: Complemental strand, 24651077 - 24651025
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtcc 190  Q
    ||||||||||||||||||||| ||||||||||||||||||  | |||||||||    
T  24651077 gggtaaatacctcttttcgtctctgtaatattagcgaattccggttttagtcc 24651025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 139 - 237
Target Start/End: Complemental strand, 4919366 - 4919268
Alignment:
Q  139 ggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaatttcatattcttc 237  Q
    |||||||||||||||||||| ||| ||||||||||||||  | ||||||| ||| |         | |||||||||||||||||||||||| |||||||    
T  4919366 ggtaaatacctcttttcgtctctggaatattagcgaattccggttttagttcctgtaaaaaaaaaaattagattttgtccctgtaatttcagattcttc 4919268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 143 - 237
Target Start/End: Complemental strand, 27159327 - 27159235
Alignment:
Q  143 aatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaatttcatattcttc 237  Q
    ||||||||||||||||| |||||||||||||||||  | ||||||||| | |         |||||||||||||||||||||||| |||||||||    
T  27159327 aatacctcttttcgtccttgtaatattagcgaatttcggttttagtccttgtaaaaaaa--atttagattttgtccctgtaattttatattcttc 27159235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 31512804 - 31512693
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaa-gacagtcgctttat 99  Q
    ||||||||||||||| ||||||  || ||| ||||||||||  ||||||||||||||| || |||| |||||||||||||||||| |||  |||||| ||    
T  31512804 tgtttgtgtttttta-tttaaaaaaagata-actcgaagtatgattaaattgattgatatttgatt-aagaaaataaaataaaaaggacgatcgcttgat 31512708  T
Q  100 ttaagatcacggttt 114  Q
    ||| ||||| |||||    
T  31512707 ttaggatcaaggttt 31512693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 31526929 - 31526818
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaa-gacagtcgctttat 99  Q
    ||||||||||||||| ||||||  || ||| ||||||||||  ||||||||||||||| || |||| |||||||||||||||||| |||  |||||| ||    
T  31526929 tgtttgtgtttttta-tttaaaaaaagata-actcgaagtatgattaaattgattgatatttgatt-aagaaaataaaataaaaaggacgatcgcttgat 31526833  T
Q  100 ttaagatcacggttt 114  Q
    ||| ||||| |||||    
T  31526832 ttaggatcaaggttt 31526818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 192
Target Start/End: Original strand, 993751 - 993804
Alignment:
Q  139 ggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccct 192  Q
    ||||||||| |||||||||| ||||||||||||||||||  | |||||||||||    
T  993751 ggtaaatacttcttttcgtctctgtaatattagcgaattccggttttagtccct 993804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 6817432 - 6817399
Alignment:
Q  204 atttagattttgtccctgtaatttcatattcttc 237  Q
    ||||||||||||||||||||||||||||||||||    
T  6817432 atttagattttgtccctgtaatttcatattcttc 6817399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 177
Target Start/End: Original strand, 24650704 - 24650741
Alignment:
Q  140 gtaaatacctcttttcgtccctgtaatattagcgaatt 177  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  24650704 gtaaatacctcttttcgtccctgtaatattaacgaatt 24650741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 237
Target Start/End: Original strand, 41001370 - 41001453
Alignment:
Q  152 tttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaatttcatattcttc 237  Q
    ||||||||||||||||||||||||||  | ||||||||||| |         | ||||||||||||||||||||||||||||||||    
T  41001370 tttcgtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaa--aattagattttgtccctgtaatttcatattcttc 41001453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 131
Target Start/End: Original strand, 345487 - 345547
Alignment:
Q  71 aaaataaaataaaaagacagtcgctttatttaagatcacggtttattgtaaaaagtttttt 131  Q
    |||||||||||||||  | ||| ||| ||||||||||| |||||||||| |||||||||||    
T  345487 aaaataaaataaaaacccggtcacttgatttaagatcaaggtttattgtgaaaagtttttt 345547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 131
Target Start/End: Original strand, 360126 - 360186
Alignment:
Q  71 aaaataaaataaaaagacagtcgctttatttaagatcacggtttattgtaaaaagtttttt 131  Q
    |||||||||||||||  | ||| ||| ||||||||||| |||||||||| |||||||||||    
T  360126 aaaataaaataaaaacccggtcacttgatttaagatcaaggtttattgtgaaaagtttttt 360186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 190
Target Start/End: Complemental strand, 31800013 - 31799965
Alignment:
Q  142 aaatacctcttttcgtccctgtaatattagcgaattatgattttagtcc 190  Q
    |||||||||||||||||||| |||||||||||||||  | |||||||||    
T  31800013 aaatacctcttttcgtccctataatattagcgaattccggttttagtcc 31799965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 127
Target Start/End: Original strand, 24060949 - 24061000
Alignment:
Q  76 aaaataaaaagacagtcgctttatttaagatcacggtttattgtaaaaagtt 127  Q
    ||||||||||||| ||| ||| |||||||||||||||||| ||| |||||||    
T  24060949 aaaataaaaagacggtcacttgatttaagatcacggtttactgtgaaaagtt 24061000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 177
Target Start/End: Original strand, 27158991 - 27159030
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaatt 177  Q
    |||| ||||||||||||||||| |||||||||||||||||    
T  27158991 gggttaatacctcttttcgtccatgtaatattagcgaatt 27159030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 177
Target Start/End: Complemental strand, 29445183 - 29445144
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaatt 177  Q
    |||| |||| ||||||||||||||||||||||||||||||    
T  29445183 gggttaatatctcttttcgtccctgtaatattagcgaatt 29445144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Complemental strand, 24074614 - 24074580
Alignment:
Q  203 gatttagattttgtccctgtaatttcatattcttc 237  Q
    |||||||||||||||| ||||||||||||||||||    
T  24074614 gatttagattttgtccttgtaatttcatattcttc 24074580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Original strand, 24650766 - 24650800
Alignment:
Q  203 gatttagattttgtccctgtaatttcatattcttc 237  Q
    |||||||||||||| ||||||||||||||||||||    
T  24650766 gatttagattttgttcctgtaatttcatattcttc 24650800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 190
Target Start/End: Complemental strand, 41425830 - 41425778
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtcc 190  Q
    |||| |||||||||||| ||||||| ||||| |||||||| ||||||| ||||    
T  41425830 gggttaatacctcttttggtccctgcaatatcagcgaattctgattttggtcc 41425778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 6665 - 6584
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaa 85  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| || ||||||||| |||| |||||    
T  6665 tgtttgtgttttttaatttaaatgaaaatagactc--agtagaattaaattgattgatgtttga-ttaagaaaagaaaaaaaaaa 6584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 21901 - 22025
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaa--ataaaaagacagtcgcttta 98  Q
    ||||||| |||||||||||||| |||||| |||| ||||||||||||| ||||||||  || || || ||||||||||  | |||||||| ||| ||| |    
T  21901 tgtttgtattttttaatttaaaagaaaatggacttgaagtagaattaagttgattgaaatttga-ttgagaaaataaaacaaaaaaagacggtcacttga 21999  T
Q  99 tttaagatcacggtttattgtaaaaa 124  Q
    |||||||||| |||||||||||||||    
T  22000 tttaagatcaaggtttattgtaaaaa 22025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 4940 - 4841
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaatttcatattcttc 237  Q
    ||||||||||||||||||||||||||||||||||| ||||  | ||||| ||||| |        |||||||||||||||| ||||||||||||||||||    
T  4940 gggtaaatacctcttttcgtccctgtaatattagcaaattccggttttaatccctgtaaaaataagatttagattttgtccttgtaatttcatattcttc 4841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 138 - 192
Target Start/End: Original strand, 4562 - 4616
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccct 192  Q
    |||||||||||||||||||||| |||||||||||||||||  |||||||||||||    
T  4562 gggtaaatacctcttttcgtccttgtaatattagcgaattccgattttagtccct 4616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 143 - 237
Target Start/End: Complemental strand, 12355 - 12260
Alignment:
Q  143 aatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat-nnnnnnnngatttagattttgtccctgtaatttcatattcttc 237  Q
    |||||||||||||||||||||||||||||||||||  | |||||||||||||         ||||||||||||||||||||||||||| |||||||    
T  12355 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccctataaaaaaaaagatttagattttgtccctgtaatttcagattcttc 12260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 138 - 237
Target Start/End: Original strand, 1411 - 1510
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctatnnnnnnnngatttagattttgtccctgtaatttcatattcttc 237  Q
    ||||||||||||||||||| ||| |||||||| |||||||  ||||||||||||| |        |||||||||| |||||||||||||||| |||||||    
T  1411 gggtaaatacctcttttcgacccggtaatatttgcgaatttcgattttagtccctgtaaaaaaaagatttagattatgtccctgtaatttcagattcttc 1510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 138 - 194
Target Start/End: Complemental strand, 1784 - 1728
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat 194  Q
    |||||||| |||||||||||||||||||||||| ||||||  | |||||||||||||    
T  1784 gggtaaatccctcttttcgtccctgtaatattaacgaattccggttttagtccctat 1728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 139 - 237
Target Start/End: Original strand, 7227 - 7326
Alignment:
Q  139 ggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat-nnnnnnnngatttagattttgtccctgtaatttcatattcttc 237  Q
    ||||||||||||||||||||| ||||||||||||||||| || | ||||| ||| |         |||||||||||||||||||||||||||||||||||    
T  7227 ggtaaatacctcttttcgtccttgtaatattagcgaattctggtgttagttcctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttc 7326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 7578 - 7477
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccc--tatnnnnnnnngatttagattttgtccctgtaatttcatattct 235  Q
    |||||||||||| |||||||||||||||||||||||||||  | ||||||||||  ||         ||||||||||||||||||||||||||| |||||    
T  7578 gggtaaatacctattttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattct 7479  T
Q  236 tc 237  Q
    ||    
T  7478 tc 7477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 85
Target Start/End: Original strand, 1344 - 1405
Alignment:
Q  23 tgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaa 85  Q
    |||||||| |||||||||||||||||||||||||||||| || ||||||||| ||||||||||    
T  1344 tgaaaataaactcgaagtagaattaaattgattgatgttaga-ttaagaaaagaaaataaaaa 1405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 138 - 191
Target Start/End: Original strand, 8325 - 8378
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccc 191  Q
    ||||||||||||||||||||||||||||||||||||||||  | ||||||||||    
T  8325 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccc 8378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 2041 - 2001
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagta 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  2041 tgtttgtgttttttaatttaaatgaaaatagactcgaagta 2001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 237
Target Start/End: Original strand, 3869 - 3969
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat-nnnnnnnngatttagattttgtccctgtaatttcatattctt 236  Q
    ||||||||| ||||||||||||||||||||||||||||||  | ||||||||||| |         |||||||||| |||||||||||||||| ||||||    
T  3869 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattatgtccctgtaatttcaaattctt 3968  T
Q  237 c 237  Q
    |    
T  3969 c 3969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 3574 - 3629
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattga 57  Q
    |||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||    
T  3574 tgtttgtgttttttaatttaaatgaaaata-acttgaagtagaattaagttgattga 3629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 138 - 192
Target Start/End: Complemental strand, 6057 - 6003
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccct 192  Q
    ||||||||||||||||| ||||||| ||||||||||||||  |||||||||||||    
T  6057 gggtaaatacctcttttggtccctgcaatattagcgaattccgattttagtccct 6003  T

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Target: scaffold0352; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 194
Target Start/End: Original strand, 4667 - 4723
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtccctat 194  Q
    ||||||||||||||||| ||||||| ||||||||||||||    |||||||||||||    
T  4667 gggtaaatacctcttttagtccctgcaatattagcgaattccagttttagtccctat 4723  T

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Target: scaffold0034 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 123
Target Start/End: Original strand, 117749 - 117834
Alignment:
Q  37 aagtagaattaaattgattgatgttggatttaagaaaataaaataaaaagacagtcgctttatttaagatcacggtttattgtaaaa 123  Q
    |||| |||||||||||||||  ||| | || ||||||||||||||||||||| ||| ||| ||||||||||| |||||||| |||||    
T  117749 aagtggaattaaattgattggagtttggtt-aagaaaataaaataaaaagacggtcacttgatttaagatcaaggtttattataaaa 117834  T

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Target: scaffold0551 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0551
Description:

Target: scaffold0551; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 124
Target Start/End: Original strand, 6423 - 6483
Alignment:
Q  63 gatttaagaaaataaaataaaaagacagtcgctttatttaagatcacggtttattgtaaaaa 124  Q
    |||||||||||||||||||||| ||| ||| ||| ||||||||||| |||||||||||||||    
T  6423 gatttaagaaaataaaataaaa-gacggtcacttgatttaagatcaaggtttattgtaaaaa 6483  T

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Target: scaffold0014 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 127
Target Start/End: Original strand, 177630 - 177686
Alignment:
Q  71 aaaataaaataaaaagacagtcgctttatttaagatcacggtttattgtaaaaagtt 127  Q
    |||||||||||||||||| ||| ||| ||||||||||| |||||||||| |||||||    
T  177630 aaaataaaataaaaagacggtcacttgatttaagatcaaggtttattgtgaaaagtt 177686  T

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Target: scaffold0014; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 127
Target Start/End: Original strand, 187128 - 187184
Alignment:
Q  71 aaaataaaataaaaagacagtcgctttatttaagatcacggtttattgtaaaaagtt 127  Q
    |||||||||||||||||| ||| ||| ||||||||||| |||||||||| |||||||    
T  187128 aaaataaaataaaaagacggtcacttgatttaagatcaaggtttattgtgaaaagtt 187184  T

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Target: scaffold0016 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 71 - 125
Target Start/End: Original strand, 56909 - 56963
Alignment:
Q  71 aaaataaaataaaaagacagtcgctttatttaagatcacggtttattgtaaaaag 125  Q
    |||||||||||||||||| ||| ||| ||||||||||| |||||||||| |||||    
T  56909 aaaataaaataaaaagacggtcacttgatttaagatcaaggtttattgtgaaaag 56963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1910 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1910
Description:

Target: scaffold1910; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 86
Target Start/End: Original strand, 89 - 173
Alignment:
Q  2 gtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaag 86  Q
    |||||| |||||||  ||||| ||||| |||||| ||||||||||||||||||| || || |||| || |||  |||||||||||    
T  89 gtttgtattttttatattaaaagaaaagagactcaaagtagaattaaattgattaatatttgattaaaaaaataaaaataaaaag 173  T

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Target: scaffold0956 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0956
Description:

Target: scaffold0956; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 213 - 327
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaagacagtcgctttatt 100  Q
    ||||||| |||||||  ||||| |||||| ||||| |||||  |||| ||||||||| ||| |||| ||||||||||||||||| |||  || ||| |||    
T  213 tgtttgtattttttatattaaa-gaaaatggactcaaagtatgattagattgattgaagtttgatt-aagaaaataaaataaaaggacgatcacttgatt 310  T
Q  101 taagatcacggtttatt 117  Q
    || ||||| ||||||||    
T  311 taggatcaaggtttatt 327  T

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Target: scaffold0586 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 185
Target Start/End: Complemental strand, 5913 - 5865
Alignment:
Q  137 tgggtaaatacctcttttcgtccctgtaatattagcgaattatgatttt 185  Q
    ||||| |||||||||||| |||| ||||||||||||||||| |||||||    
T  5913 tgggttaatacctcttttggtccatgtaatattagcgaattttgatttt 5865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 190
Target Start/End: Original strand, 4880 - 4932
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaattatgattttagtcc 190  Q
    ||||||||||||||||| || |||||||||||||||||||  | |||||||||    
T  4880 gggtaaatacctctttttgttcctgtaatattagcgaatttcggttttagtcc 4932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 127
Target Start/End: Complemental strand, 28553 - 28497
Alignment:
Q  71 aaaataaaataaaaagacagtcgctttatttaagatcacggtttattgtaaaaagtt 127  Q
    |||||||||||||| ||| ||| ||| ||||||||||| |||||||||| |||||||    
T  28553 aaaataaaataaaaggacggtcacttgatttaagatcaaggtttattgtgaaaagtt 28497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 177
Target Start/End: Complemental strand, 16006 - 15967
Alignment:
Q  138 gggtaaatacctcttttcgtccctgtaatattagcgaatt 177  Q
    ||||||||| |||||||||||| |||||||||||||||||    
T  16006 gggtaaatatctcttttcgtccatgtaatattagcgaatt 15967  T

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Target: scaffold0176; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 236
Target Start/End: Complemental strand, 15939 - 15911
Alignment:
Q  208 agattttgtccctgtaatttcatattctt 236  Q
    |||||||||||||||||||||||||||||    
T  15939 agattttgtccctgtaatttcatattctt 15911  T

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Target: scaffold0064 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 7685 - 7796
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaa-gacagtcgctttat 99  Q
    |||||||||||||||  ||||| ||||   ||||| ||||  |||||||||||||||| || |||| |||||||||||||||||| |||  |||||| ||    
T  7685 tgtttgtgtttttta--ttaaaagaaagatgactcaaagtgtaattaaattgattgatatttgatt-aagaaaataaaataaaaaggacgatcgcttgat 7781  T
Q  100 ttaagatcacggttt 114  Q
    ||| ||||| |||||    
T  7782 ttaggatcaaggttt 7796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 4182 - 4128
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgatt 55  Q
    |||||||||||||||  ||||| ||||| |||||| ||||| |||||||||||||    
T  4182 tgtttgtgttttttatattaaaagaaaagagactctaagtaaaattaaattgatt 4128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 57517 - 57434
Alignment:
Q  1 tgtttgtgttttttaat-ttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaa 85  Q
    ||||||||||||||||| || ||  |||| | |||||||||| |||||||||||||||| || || ||||||||| ||||||||||    
T  57517 tgtttgtgttttttaatattgaaaaaaaagaaactcgaagta-aattaaattgattgatatttga-ttaagaaaagaaaataaaaa 57434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 77234 - 77344
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaagacagtcgctttatt 100  Q
    |||||||||||||||  ||||| ||||||| |||| || |   ||||||||| || | ||| || ||||||||||||||| ||||||||||| ||| |||    
T  77234 tgtttgtgttttttatattaaaagaaaata-actcaaaatgtgattaaattggttaaagtttga-ttaagaaaataaaat-aaaagacagtcacttgatt 77330  T
Q  101 taagatcacggttt 114  Q
    |||||||| |||||    
T  77331 taagatcaaggttt 77344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 743 - 800
Alignment:
Q  1 tgtttgtgttttttaat-ttaaatgaaaatagactcgaagtagaattaaattgattga 57  Q
    |||||||||||||| || || || || ||||||||| |||||||||||||||||||||    
T  743 tgtttgtgtttttttatattgaaagataatagactcaaagtagaattaaattgattga 800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 133
Target Start/End: Complemental strand, 298356 - 298268
Alignment:
Q  45 ttaaattgattgatgttggatttaagaaaataaaataaaaa-gacagtcgctttatttaagatcacggtttattgtaaaaagttttttgt 133  Q
    |||||||||||||| || |||| |||||||||||||||||| |||  || ||| ||||| ||||| |||||||| ||||||  |||||||    
T  298356 ttaaattgattgatatttgatt-aagaaaataaaataaaaaggacgatcacttgatttaggatcaaggtttattataaaaatgtttttgt 298268  T

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Target: scaffold0799 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0799
Description:

Target: scaffold0799; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 85
Target Start/End: Original strand, 5806 - 5890
Alignment:
Q  2 gtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattg-atgttggatttaagaaaataaaataaaaa 85  Q
    |||||| |||||||||||||| |||||| ||||| | |||  ||||||||||||| | ||| |||| |  |||||||||||||||    
T  5806 gtttgtattttttaatttaaaagaaaatggactcaaggtatgattaaattgattgaaagtttgattaagaaaaataaaataaaaa 5890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 234 - 357
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaa-agacagtcgctttat 99  Q
    ||||||| |||||| || | || |||||| ||| | |||||  |||| ||||||||| ||| |||| ||||||||||||||||| | ||  || ||| ||    
T  234 tgtttgtatttttttatattaaagaaaatggacacaaagtatgattagattgattgaagtttgatt-aagaaaataaaataaaataaacgatcacttgat 332  T
Q  100 ttaagatcacggtttattgtaaaaa 124  Q
    ||| ||||| |||||||||||||||    
T  333 ttaggatcaaggtttattgtaaaaa 357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 4801 - 4924
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaa-agacagtcgctttat 99  Q
    ||||||| |||||| || | || |||||| ||| | |||||  |||| ||||||||| ||| |||| ||||||||||||||||| | ||  || ||| ||    
T  4801 tgtttgtatttttttatattaaagaaaatggacacaaagtatgattagattgattgaagtttgatt-aagaaaataaaataaaataaacgatcacttgat 4899  T
Q  100 ttaagatcacggtttattgtaaaaa 124  Q
    ||| ||||| |||||||||||||||    
T  4900 ttaggatcaaggtttattgtaaaaa 4924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0458 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0458
Description:

Target: scaffold0458; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 7625 - 7747
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaa-agacagtcgctttat 99  Q
    ||||||| |||||||  ||||| |||||| | ||| |||||  |||| ||||||||| ||| |||| ||||||||||||||||| | ||  || ||| ||    
T  7625 tgtttgtattttttatattaaa-gaaaatgggctcaaagtatgattagattgattgaagtttgatt-aagaaaataaaataaaataaacgatcacttgat 7722  T
Q  100 ttaagatcacggtttattgtaaaaa 124  Q
    ||| ||||| |||||||||||||||    
T  7723 ttaggatcaaggtttattgtaaaaa 7747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 16781 - 16698
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattgatgttggatttaagaaaataaaataaaaa 85  Q
    ||||||||||||||||| |  |  |||| |||||  ||||| | ||||||||||||| ||| |||| ||||||||||||||||||    
T  16781 tgtttgtgttttttaatattgaaaaaaagagacttaaagtaaagttaaattgattgaagtttgatt-aagaaaataaaataaaaa 16698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 136770 - 136825
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattga 57  Q
    |||||||||||||  ||| ||| || ||||||||| |||||||||||||||||||||    
T  136770 tgtttgtgtttttatattgaaa-gataatagactcaaagtagaattaaattgattga 136825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 145732 - 145788
Alignment:
Q  1 tgtttgtgttttttaatttaaatgaaaatagactcgaagtagaattaaattgattga 57  Q
    |||||||||||||||  || || || ||| ||||| |||||||||||||||||||||    
T  145732 tgtttgtgttttttatattgaaagataatcgactcaaagtagaattaaattgattga 145788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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