View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10140A_low_332 (Length: 240)

Name: NF10140A_low_332
Description: NF10140A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10140A_low_332
NF10140A_low_332
[»] chr7 (78 HSPs)
chr7 (1-233)||(14627753-14627985)
chr7 (9-207)||(42066962-42067159)
chr7 (7-209)||(6558854-6559056)
chr7 (7-209)||(22927768-22927970)
chr7 (9-209)||(35667130-35667330)
chr7 (7-209)||(1448728-1448930)
chr7 (7-209)||(35496073-35496275)
chr7 (7-209)||(26492342-26492544)
chr7 (11-209)||(46821996-46822194)
chr7 (13-209)||(23786558-23786754)
chr7 (7-209)||(433589-433792)
chr7 (7-209)||(23085498-23085700)
chr7 (7-209)||(26583691-26583888)
chr7 (7-209)||(42311257-42311459)
chr7 (7-209)||(45198931-45199132)
chr7 (7-209)||(48207878-48208079)
chr7 (7-195)||(42408339-42408527)
chr7 (34-209)||(32684672-32684847)
chr7 (11-209)||(46339035-46339233)
chr7 (11-209)||(34773692-34773890)
chr7 (7-209)||(1485154-1485357)
chr7 (7-209)||(17222898-17223099)
chr7 (7-209)||(20116559-20116761)
chr7 (11-209)||(2843139-2843325)
chr7 (9-209)||(21266369-21266569)
chr7 (39-202)||(19560007-19560170)
chr7 (8-209)||(6001999-6002208)
chr7 (7-209)||(23425271-23425472)
chr7 (8-209)||(31235682-31235891)
chr7 (8-209)||(35261277-35261476)
chr7 (7-209)||(7640673-7640872)
chr7 (100-209)||(13592407-13592515)
chr7 (18-209)||(32521827-32522016)
chr7 (44-209)||(20083352-20083517)
chr7 (9-202)||(46818324-46818514)
chr7 (8-139)||(17611103-17611234)
chr7 (84-208)||(46244171-46244292)
chr7 (61-111)||(3266540-3266590)
chr7 (117-207)||(17499581-17499670)
chr7 (117-207)||(17553544-17553633)
chr7 (91-193)||(43369687-43369788)
chr7 (8-108)||(969478-969578)
chr7 (63-111)||(9785473-9785521)
chr7 (63-111)||(45457473-45457521)
chr7 (166-209)||(17611245-17611288)
chr7 (36-78)||(28476211-28476253)
chr7 (7-61)||(37837533-37837587)
chr7 (117-153)||(22743027-22743063)
chr7 (63-111)||(36579258-36579306)
chr7 (21-114)||(3267237-3267327)
chr7 (8-71)||(3394434-3394497)
chr7 (7-70)||(17499696-17499759)
chr7 (7-70)||(17553455-17553518)
chr7 (36-71)||(22742928-22742963)
chr7 (36-71)||(24350909-24350944)
chr7 (7-61)||(8001621-8001675)
chr7 (7-61)||(9450212-9450266)
chr7 (61-111)||(41288110-41288160)
chr7 (119-208)||(13796848-13796935)
chr7 (63-100)||(36253086-36253123)
chr7 (63-111)||(1281054-1281102)
chr7 (36-76)||(1749214-1749254)
chr7 (67-111)||(2622752-2622796)
chr7 (63-111)||(10094597-10094645)
chr7 (75-111)||(10574549-10574585)
chr7 (67-111)||(11833178-11833222)
chr7 (117-193)||(19404690-19404765)
chr7 (63-111)||(21603616-21603664)
chr7 (63-111)||(21990818-21990866)
chr7 (117-153)||(24350811-24350847)
chr7 (67-111)||(27050380-27050424)
chr7 (36-76)||(35132931-35132971)
chr7 (117-153)||(35133030-35133066)
chr7 (36-112)||(41553461-41553537)
chr7 (36-112)||(41553806-41553882)
chr7 (117-193)||(46700118-46700193)
chr7 (67-111)||(48304310-48304354)
chr7 (36-76)||(48930757-48930797)
[»] chr1 (76 HSPs)
chr1 (7-209)||(28035120-28035322)
chr1 (7-209)||(45425964-45426166)
chr1 (7-209)||(9687103-9687304)
chr1 (10-209)||(40880911-40881109)
chr1 (7-209)||(50272038-50272240)
chr1 (7-209)||(5324456-5324658)
chr1 (11-209)||(7997774-7997972)
chr1 (7-209)||(51868543-51868745)
chr1 (7-209)||(51871844-51872046)
chr1 (6-209)||(9172470-9172673)
chr1 (6-209)||(9180452-9180655)
chr1 (9-209)||(34519115-34519311)
chr1 (11-209)||(5701244-5701442)
chr1 (7-209)||(7342703-7342905)
chr1 (7-209)||(33291316-33291518)
chr1 (7-209)||(50165997-50166199)
chr1 (7-209)||(11453916-11454118)
chr1 (19-209)||(35584516-35584706)
chr1 (7-203)||(9919370-9919566)
chr1 (11-209)||(19715793-19715990)
chr1 (7-209)||(14545500-14545700)
chr1 (7-209)||(25406182-25406384)
chr1 (7-209)||(30818249-30818446)
chr1 (11-195)||(31836792-31836975)
chr1 (7-209)||(3871389-3871591)
chr1 (11-209)||(30879061-30879258)
chr1 (11-209)||(50148359-50148553)
chr1 (8-198)||(39987371-39987560)
chr1 (11-209)||(20266287-20266485)
chr1 (8-209)||(38520433-38520633)
chr1 (8-209)||(27872720-27872920)
chr1 (12-209)||(45805726-45805911)
chr1 (8-209)||(48365664-48365864)
chr1 (8-209)||(18569209-18569409)
chr1 (56-209)||(40646700-40646857)
chr1 (16-209)||(33817066-33817271)
chr1 (17-209)||(33876536-33876740)
chr1 (8-209)||(39927453-39927653)
chr1 (19-209)||(7312004-7312188)
chr1 (24-209)||(41081602-41081787)
chr1 (117-209)||(32677028-32677120)
chr1 (117-209)||(19723404-19723496)
chr1 (7-159)||(44637402-44637554)
chr1 (7-70)||(19723314-19723377)
chr1 (165-209)||(11709605-11709649)
chr1 (36-112)||(34528719-34528795)
chr1 (63-111)||(42491049-42491097)
chr1 (36-112)||(44543262-44543337)
chr1 (36-112)||(47132892-47132968)
chr1 (117-208)||(21947537-21947626)
chr1 (165-204)||(27915007-27915046)
chr1 (36-78)||(16161823-16161865)
chr1 (58-112)||(29184222-29184276)
chr1 (36-78)||(34413155-34413197)
chr1 (92-153)||(4397036-4397097)
chr1 (67-108)||(4870953-4870994)
chr1 (168-209)||(31130491-31130532)
chr1 (92-156)||(31317795-31317859)
chr1 (63-111)||(42276511-42276559)
chr1 (36-112)||(49626903-49626978)
chr1 (117-197)||(51916595-51916673)
chr1 (129-208)||(4413210-4413287)
chr1 (117-208)||(44915723-44915812)
chr1 (36-112)||(48750170-48750250)
chr1 (7-61)||(5983799-5983853)
chr1 (36-70)||(12635159-12635193)
chr1 (61-111)||(45193545-45193595)
chr1 (50-111)||(20411715-20411776)
chr1 (63-111)||(8937786-8937834)
chr1 (67-111)||(9298333-9298377)
chr1 (63-111)||(15391169-15391217)
chr1 (67-111)||(15791192-15791236)
chr1 (116-156)||(16262944-16262984)
chr1 (75-111)||(32878876-32878912)
chr1 (117-153)||(36775682-36775718)
chr1 (63-111)||(44517303-44517351)
[»] chr4 (87 HSPs)
chr4 (7-209)||(25273872-25274074)
chr4 (7-209)||(4643847-4644049)
chr4 (7-209)||(43153912-43154114)
chr4 (7-209)||(9528775-9528977)
chr4 (9-209)||(10389652-10389852)
chr4 (27-209)||(49410232-49410414)
chr4 (11-209)||(53616548-53616746)
chr4 (7-208)||(44947401-44947602)
chr4 (11-209)||(50766410-50766605)
chr4 (7-209)||(868151-868354)
chr4 (11-209)||(29965628-29965826)
chr4 (7-209)||(38706608-38706810)
chr4 (9-209)||(34024336-34024535)
chr4 (13-209)||(47417657-47417853)
chr4 (9-209)||(51317976-51318176)
chr4 (7-209)||(6972799-6973001)
chr4 (11-209)||(9283904-9284102)
chr4 (7-201)||(31381578-31381772)
chr4 (11-209)||(43444386-43444583)
chr4 (7-208)||(37188494-37188694)
chr4 (7-209)||(1531897-1532099)
chr4 (11-209)||(2115486-2115683)
chr4 (22-209)||(45227939-45228126)
chr4 (8-209)||(10359446-10359646)
chr4 (7-193)||(8009275-8009461)
chr4 (11-209)||(20569248-20569448)
chr4 (8-209)||(35964874-35965074)
chr4 (7-209)||(14183792-14183992)
chr4 (7-209)||(32952649-32952848)
chr4 (17-209)||(46991029-46991220)
chr4 (11-209)||(49680534-49680728)
chr4 (8-209)||(27593727-27593926)
chr4 (8-209)||(12265445-12265653)
chr4 (9-209)||(18138812-18139011)
chr4 (9-209)||(49126025-49126224)
chr4 (10-177)||(9645479-9645646)
chr4 (8-209)||(3336062-3336256)
chr4 (27-209)||(52097814-52097996)
chr4 (24-157)||(2624502-2624636)
chr4 (7-133)||(56194590-56194716)
chr4 (8-209)||(21090142-21090333)
chr4 (8-209)||(35261181-35261383)
chr4 (84-193)||(23100745-23100853)
chr4 (137-209)||(56199215-56199287)
chr4 (36-193)||(26123280-26123436)
chr4 (84-192)||(36184599-36184706)
chr4 (118-193)||(28834164-28834238)
chr4 (36-193)||(43353468-43353629)
chr4 (155-209)||(9645422-9645476)
chr4 (11-112)||(52933970-52934072)
chr4 (166-207)||(1931651-1931692)
chr4 (7-112)||(28857379-28857484)
chr4 (7-100)||(1931723-1931816)
chr4 (144-209)||(7273712-7273776)
chr4 (101-186)||(40068694-40068778)
chr4 (36-112)||(9643394-9643470)
chr4 (120-156)||(21662541-21662577)
chr4 (120-156)||(21671305-21671341)
chr4 (63-111)||(26742380-26742428)
chr4 (36-76)||(36194711-36194751)
chr4 (85-189)||(49072682-49072785)
chr4 (36-112)||(51888238-51888314)
chr4 (36-112)||(52944317-52944393)
chr4 (67-99)||(55600466-55600498)
chr4 (36-71)||(22300855-22300890)
chr4 (117-208)||(22611284-22611373)
chr4 (117-156)||(33921155-33921194)
chr4 (117-208)||(53811129-53811218)
chr4 (91-133)||(1008322-1008364)
chr4 (61-111)||(29922989-29923039)
chr4 (7-61)||(32766494-32766548)
chr4 (36-70)||(47320460-47320494)
chr4 (7-108)||(2069611-2069711)
chr4 (62-111)||(32616776-32616825)
chr4 (8-108)||(36204415-36204516)
chr4 (63-112)||(44756958-44757007)
chr4 (7-71)||(4142820-4142884)
chr4 (63-111)||(7861123-7861171)
chr4 (117-193)||(19853445-19853520)
chr4 (63-111)||(20399820-20399868)
chr4 (63-111)||(24789345-24789393)
chr4 (63-111)||(24818866-24818914)
chr4 (36-76)||(27651946-27651986)
chr4 (63-111)||(29268694-29268742)
chr4 (67-111)||(39523569-39523613)
chr4 (63-111)||(40198462-40198510)
chr4 (63-111)||(43493204-43493252)
[»] chr5 (68 HSPs)
chr5 (7-209)||(27266757-27266959)
chr5 (9-209)||(2057736-2057936)
chr5 (7-209)||(19259710-19259911)
chr5 (7-209)||(34881697-34881898)
chr5 (7-209)||(41184338-41184540)
chr5 (9-209)||(30298189-30298388)
chr5 (7-200)||(42579867-42580060)
chr5 (7-209)||(18677363-18677565)
chr5 (7-209)||(3271300-3271502)
chr5 (7-209)||(19280843-19281045)
chr5 (7-209)||(43261717-43261919)
chr5 (7-207)||(35475238-35475437)
chr5 (7-209)||(7246938-7247140)
chr5 (11-209)||(26578235-26578433)
chr5 (7-209)||(16981269-16981473)
chr5 (8-209)||(21060181-21060381)
chr5 (7-209)||(781368-781569)
chr5 (7-209)||(7150233-7150435)
chr5 (7-209)||(10649626-10649825)
chr5 (7-209)||(7241762-7241965)
chr5 (7-209)||(43148710-43148908)
chr5 (7-209)||(27751905-27752106)
chr5 (41-209)||(4954005-4954173)
chr5 (8-209)||(42886458-42886659)
chr5 (7-209)||(28235564-28235766)
chr5 (9-209)||(7886837-7887036)
chr5 (11-151)||(30371709-30371849)
chr5 (7-162)||(36344436-36344590)
chr5 (17-209)||(7612956-7613148)
chr5 (83-209)||(20257594-20257719)
chr5 (7-209)||(15570889-15571088)
chr5 (91-209)||(11768065-11768180)
chr5 (7-148)||(27576309-27576450)
chr5 (83-209)||(22978822-22978947)
chr5 (135-209)||(30298951-30299025)
chr5 (36-193)||(19100552-19100708)
chr5 (106-192)||(6445951-6446036)
chr5 (91-188)||(42432962-42433058)
chr5 (63-111)||(17687361-17687409)
chr5 (44-157)||(28097169-28097279)
chr5 (59-149)||(41214622-41214714)
chr5 (117-208)||(6216978-6217067)
chr5 (36-111)||(10332576-10332651)
chr5 (138-201)||(41418628-41418690)
chr5 (7-61)||(6012213-6012267)
chr5 (61-111)||(17096158-17096208)
chr5 (38-156)||(13468612-13468727)
chr5 (36-76)||(14211208-14211248)
chr5 (36-76)||(28540973-28541013)
chr5 (117-156)||(35920965-35921004)
chr5 (83-189)||(11192425-11192530)
chr5 (7-61)||(14082448-14082502)
chr5 (85-171)||(42432019-42432103)
chr5 (63-100)||(23428408-23428445)
chr5 (117-153)||(2979278-2979314)
chr5 (63-111)||(7771738-7771786)
chr5 (63-111)||(11734736-11734784)
chr5 (18-70)||(11767799-11767851)
chr5 (67-111)||(14535058-14535102)
chr5 (117-193)||(15571566-15571641)
chr5 (63-111)||(17331484-17331532)
chr5 (67-111)||(17732303-17732347)
chr5 (36-76)||(19103534-19103574)
chr5 (63-111)||(20483342-20483390)
chr5 (117-153)||(28540878-28540914)
chr5 (63-111)||(32347631-32347679)
chr5 (63-111)||(33164385-33164433)
chr5 (63-111)||(42609300-42609348)
[»] chr3 (56 HSPs)
chr3 (7-209)||(25162410-25162612)
chr3 (1-209)||(39917296-39917503)
chr3 (7-209)||(25631424-25631626)
chr3 (7-209)||(49552122-49552324)
chr3 (7-209)||(51202152-51202354)
chr3 (7-209)||(29503436-29503637)
chr3 (11-209)||(32607447-32607645)
chr3 (7-209)||(42719491-42719693)
chr3 (9-207)||(46934618-46934816)
chr3 (6-209)||(3848817-3849020)
chr3 (7-209)||(4178539-4178741)
chr3 (7-209)||(17237779-17237981)
chr3 (7-206)||(30648620-30648819)
chr3 (11-209)||(44907297-44907494)
chr3 (11-209)||(12116075-12116274)
chr3 (7-209)||(14464484-14464686)
chr3 (11-209)||(36906100-36906298)
chr3 (11-201)||(35499104-35499294)
chr3 (7-209)||(38854934-38855136)
chr3 (7-209)||(50611316-50611517)
chr3 (8-209)||(36734591-36734791)
chr3 (20-209)||(21488078-21488269)
chr3 (8-207)||(31794046-31794244)
chr3 (7-209)||(22802996-22803206)
chr3 (9-192)||(38440496-38440676)
chr3 (92-233)||(2342522-2342666)
chr3 (44-209)||(25849821-25849985)
chr3 (85-209)||(46178621-46178744)
chr3 (8-197)||(6910622-6910802)
chr3 (114-203)||(21916555-21916643)
chr3 (24-209)||(37169222-37169405)
chr3 (7-71)||(4172541-4172605)
chr3 (7-69)||(2342466-2342528)
chr3 (36-108)||(12947305-12947377)
chr3 (61-111)||(39610364-39610414)
chr3 (36-193)||(30293419-30293575)
chr3 (36-112)||(29249218-29249294)
chr3 (63-111)||(40013197-40013245)
chr3 (67-111)||(42167938-42167982)
chr3 (63-111)||(45047670-45047718)
chr3 (100-191)||(6902959-6903049)
chr3 (36-71)||(7546595-7546630)
chr3 (8-71)||(29239300-29239363)
chr3 (36-71)||(51487091-51487126)
chr3 (7-61)||(20465045-20465099)
chr3 (36-78)||(27706291-27706333)
chr3 (36-78)||(42460731-42460773)
chr3 (7-61)||(43488665-43488719)
chr3 (63-112)||(14585618-14585667)
chr3 (128-209)||(54149082-54149161)
chr3 (75-111)||(3457107-3457143)
chr3 (117-153)||(8914792-8914828)
chr3 (63-111)||(36624620-36624668)
chr3 (63-111)||(49628020-49628068)
chr3 (117-153)||(51303615-51303651)
chr3 (63-111)||(54706640-54706688)
[»] chr2 (84 HSPs)
chr2 (7-209)||(9986240-9986442)
chr2 (7-209)||(6173613-6173815)
chr2 (7-209)||(20046980-20047182)
chr2 (1-209)||(7015609-7015817)
chr2 (11-209)||(36233993-36234191)
chr2 (7-208)||(8805847-8806048)
chr2 (7-209)||(32913222-32913423)
chr2 (7-209)||(2808370-2808572)
chr2 (7-209)||(3725161-3725363)
chr2 (7-209)||(21570306-21570507)
chr2 (7-209)||(45128185-45128387)
chr2 (7-196)||(3269022-3269211)
chr2 (7-196)||(3269581-3269770)
chr2 (7-196)||(3270140-3270329)
chr2 (7-209)||(4192819-4193020)
chr2 (19-209)||(27249049-27249239)
chr2 (7-209)||(40659830-40660032)
chr2 (7-209)||(41431009-41431211)
chr2 (10-209)||(27949410-27949609)
chr2 (11-184)||(30420663-30420836)
chr2 (7-209)||(8971526-8971727)
chr2 (7-203)||(22421716-22421905)
chr2 (7-147)||(34598968-34599108)
chr2 (7-186)||(26025331-26025510)
chr2 (9-210)||(25087020-25087220)
chr2 (7-209)||(4228114-4228306)
chr2 (60-209)||(84079-84227)
chr2 (44-209)||(32679008-32679173)
chr2 (92-209)||(40625955-40626072)
chr2 (28-209)||(27477150-27477331)
chr2 (8-209)||(459173-459373)
chr2 (9-209)||(17319305-17319503)
chr2 (24-209)||(37614024-37614208)
chr2 (10-132)||(31580564-31580686)
chr2 (117-209)||(33229038-33229130)
chr2 (110-209)||(41712687-41712785)
chr2 (111-209)||(38575383-38575481)
chr2 (8-200)||(39641766-39641957)
chr2 (36-199)||(8308181-8308342)
chr2 (144-209)||(34600332-34600397)
chr2 (7-188)||(32197715-32197895)
chr2 (7-69)||(40626066-40626128)
chr2 (8-132)||(9374531-9374655)
chr2 (8-78)||(12647982-12648052)
chr2 (36-156)||(38293559-38293679)
chr2 (7-48)||(32680640-32680681)
chr2 (36-193)||(44881657-44881813)
chr2 (36-112)||(6358899-6358977)
chr2 (50-153)||(18113893-18113996)
chr2 (36-111)||(29574657-29574732)
chr2 (7-48)||(41712824-41712865)
chr2 (7-113)||(18763438-18763541)
chr2 (67-111)||(45694363-45694407)
chr2 (36-114)||(14423321-14423399)
chr2 (119-193)||(18695147-18695220)
chr2 (7-61)||(39310928-39310982)
chr2 (160-209)||(9374465-9374514)
chr2 (86-190)||(3240946-3241049)
chr2 (63-111)||(5754444-5754492)
chr2 (117-153)||(14955620-14955656)
chr2 (63-111)||(36868164-36868212)
chr2 (117-192)||(19028849-19028923)
chr2 (117-208)||(29279490-29279579)
chr2 (117-208)||(31128700-31128789)
chr2 (67-110)||(36080683-36080726)
chr2 (91-193)||(13141550-13141651)
chr2 (96-126)||(17261606-17261636)
chr2 (36-110)||(28533984-28534058)
chr2 (86-192)||(36323915-36324019)
chr2 (36-78)||(37416706-37416748)
chr2 (37-112)||(4264472-4264544)
chr2 (117-154)||(30400007-30400044)
chr2 (86-131)||(34124521-34124566)
chr2 (128-209)||(36943040-36943119)
chr2 (63-111)||(4426575-4426623)
chr2 (63-111)||(4732226-4732274)
chr2 (136-208)||(7646588-7646658)
chr2 (63-111)||(9978586-9978634)
chr2 (63-111)||(12891035-12891083)
chr2 (36-112)||(17249175-17249250)
chr2 (67-111)||(20561049-20561093)
chr2 (36-112)||(32448647-32448722)
chr2 (63-111)||(34962993-34963041)
chr2 (63-111)||(43474045-43474093)
[»] chr8 (64 HSPs)
chr8 (11-209)||(11464159-11464357)
chr8 (7-209)||(42447925-42448127)
chr8 (9-209)||(32724379-32724579)
chr8 (11-209)||(4808952-4809150)
chr8 (7-214)||(34611788-34611995)
chr8 (11-209)||(2655858-2656056)
chr8 (11-209)||(43890022-43890220)
chr8 (7-209)||(44099834-44100033)
chr8 (11-202)||(9619262-9619453)
chr8 (7-209)||(19876195-19876396)
chr8 (9-209)||(11725667-11725866)
chr8 (7-209)||(9072702-9072904)
chr8 (7-209)||(33896066-33896272)
chr8 (7-209)||(29777203-29777405)
chr8 (8-202)||(43192252-43192445)
chr8 (9-209)||(11196875-11197069)
chr8 (11-209)||(9498497-9498695)
chr8 (11-209)||(14906821-14907019)
chr8 (8-209)||(35580442-35580642)
chr8 (11-209)||(44578024-44578216)
chr8 (10-209)||(37565777-37565976)
chr8 (10-209)||(28239820-28240027)
chr8 (44-209)||(23851392-23851557)
chr8 (50-209)||(17949262-17949419)
chr8 (7-209)||(33298839-33299040)
chr8 (8-209)||(33342422-33342620)
chr8 (8-209)||(39153040-39153241)
chr8 (8-209)||(15046879-15047078)
chr8 (8-209)||(27747013-27747212)
chr8 (85-209)||(43135477-43135600)
chr8 (8-209)||(16794277-16794477)
chr8 (9-209)||(15597066-15597265)
chr8 (20-112)||(36532894-36532986)
chr8 (85-193)||(35812723-35812830)
chr8 (61-100)||(10148099-10148138)
chr8 (9-69)||(8443579-8443639)
chr8 (10-112)||(5333391-5333493)
chr8 (83-193)||(14913137-14913246)
chr8 (61-111)||(30026807-30026857)
chr8 (128-193)||(7677214-7677278)
chr8 (177-209)||(11267162-11267194)
chr8 (36-108)||(24099284-24099356)
chr8 (63-111)||(28297032-28297080)
chr8 (38-78)||(39657440-39657480)
chr8 (117-156)||(471133-471172)
chr8 (117-152)||(27110436-27110471)
chr8 (7-61)||(7883314-7883368)
chr8 (7-61)||(23230605-23230659)
chr8 (36-110)||(29617301-29617375)
chr8 (7-61)||(37971245-37971299)
chr8 (63-108)||(10334332-10334377)
chr8 (36-112)||(1236722-1236797)
chr8 (36-112)||(1239422-1239497)
chr8 (75-111)||(2025149-2025185)
chr8 (63-111)||(3204710-3204758)
chr8 (101-193)||(12184356-12184447)
chr8 (101-193)||(12428784-12428875)
chr8 (36-112)||(15344297-15344372)
chr8 (36-112)||(15433362-15433437)
chr8 (36-112)||(15524666-15524741)
chr8 (117-153)||(18890669-18890705)
chr8 (63-111)||(37612809-37612857)
chr8 (75-111)||(38546078-38546114)
chr8 (63-111)||(43937102-43937150)
[»] chr6 (50 HSPs)
chr6 (7-209)||(4984465-4984667)
chr6 (7-209)||(12652921-12653123)
chr6 (9-209)||(4088439-4088639)
chr6 (11-209)||(7881000-7881198)
chr6 (7-209)||(16419135-16419337)
chr6 (7-209)||(33740476-33740678)
chr6 (9-209)||(23947215-23947416)
chr6 (9-209)||(8028016-8028216)
chr6 (7-209)||(8196305-8196507)
chr6 (11-209)||(25064217-25064415)
chr6 (7-209)||(35001567-35001769)
chr6 (11-209)||(7875942-7876140)
chr6 (7-209)||(17237184-17237385)
chr6 (27-209)||(33110608-33110790)
chr6 (7-209)||(10228656-10228858)
chr6 (7-209)||(4468535-4468737)
chr6 (12-209)||(8496949-8497147)
chr6 (7-199)||(12165817-12166008)
chr6 (8-209)||(28635011-28635220)
chr6 (8-209)||(25337548-25337744)
chr6 (114-209)||(7027947-7028042)
chr6 (107-209)||(16892714-16892816)
chr6 (8-209)||(33543522-33543719)
chr6 (123-209)||(17334846-17334932)
chr6 (8-209)||(4351903-4352095)
chr6 (8-107)||(34489228-34489327)
chr6 (24-193)||(1704065-1704233)
chr6 (1-70)||(7027805-7027874)
chr6 (148-202)||(20619585-20619639)
chr6 (148-209)||(12059671-12059732)
chr6 (11-70)||(17334759-17334818)
chr6 (84-193)||(25398617-25398725)
chr6 (8-112)||(30493491-30493595)
chr6 (60-126)||(9426873-9426939)
chr6 (44-112)||(26588499-26588567)
chr6 (36-108)||(31296807-31296879)
chr6 (63-111)||(31705321-31705369)
chr6 (36-112)||(8102709-8102789)
chr6 (166-209)||(34489357-34489399)
chr6 (61-111)||(19402727-19402777)
chr6 (36-70)||(22571461-22571495)
chr6 (61-111)||(23638037-23638087)
chr6 (116-193)||(8266716-8266792)
chr6 (117-153)||(546113-546149)
chr6 (75-111)||(1915103-1915139)
chr6 (117-153)||(14801909-14801945)
chr6 (63-111)||(23654406-23654454)
chr6 (67-111)||(29284913-29284957)
chr6 (8-116)||(31575530-31575638)
chr6 (121-193)||(31852126-31852197)
[»] scaffold0146 (1 HSPs)
scaffold0146 (7-209)||(16218-16420)
[»] scaffold0014 (1 HSPs)
scaffold0014 (7-207)||(201273-201472)
[»] scaffold0495 (1 HSPs)
scaffold0495 (7-209)||(5375-5577)
[»] scaffold0022 (1 HSPs)
scaffold0022 (7-207)||(83338-83535)
[»] scaffold0426 (1 HSPs)
scaffold0426 (18-209)||(6293-6484)
[»] scaffold0003 (1 HSPs)
scaffold0003 (7-209)||(361697-361899)
[»] scaffold0311 (2 HSPs)
scaffold0311 (84-209)||(8745-8870)
scaffold0311 (7-42)||(8696-8731)
[»] scaffold0113 (1 HSPs)
scaffold0113 (36-155)||(36639-36758)
[»] scaffold0136 (1 HSPs)
scaffold0136 (91-208)||(34681-34796)
[»] scaffold0264 (1 HSPs)
scaffold0264 (10-70)||(20433-20493)
[»] scaffold0002 (2 HSPs)
scaffold0002 (26-128)||(453928-454030)
scaffold0002 (173-209)||(454056-454092)
[»] scaffold0347 (1 HSPs)
scaffold0347 (36-108)||(6016-6088)
[»] scaffold0127 (1 HSPs)
scaffold0127 (7-61)||(15451-15505)
[»] scaffold0088 (1 HSPs)
scaffold0088 (117-208)||(50857-50946)
[»] scaffold0888 (1 HSPs)
scaffold0888 (36-78)||(1743-1785)
[»] scaffold0536 (1 HSPs)
scaffold0536 (61-111)||(3054-3104)
[»] scaffold0017 (1 HSPs)
scaffold0017 (7-61)||(32822-32876)
[»] scaffold1379 (1 HSPs)
scaffold1379 (63-111)||(131-179)
[»] scaffold0121 (1 HSPs)
scaffold0121 (117-193)||(31207-31282)
[»] scaffold0056 (1 HSPs)
scaffold0056 (67-111)||(74324-74368)


Alignment Details
Target: chr7 (Bit Score: 209; Significance: 1e-114; HSPs: 78)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 14627985 - 14627753
Alignment:
Q  1 tttccgtgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattca 100  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  14627985 tttccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcgtcttagtacggtgtttatttgattca 14627886  T
Q  101 tattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttg 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  14627885 tattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagattcggaggccatgaatattccagtcactttaattttatcatatatttttg 14627786  T
Q  201 taggcattaacttggatactgtgattttcttcg 233  Q
    ||||||||||||||||| |||||||||| ||||    
T  14627785 taggcattaacttggatgctgtgattttgttcg 14627753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 9 - 207
Target Start/End: Complemental strand, 42067159 - 42066962
Alignment:
Q  9 tgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaa 108  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||| ||||  | ||||||| |||||||||||||||||     
T  42067159 tgatttcatcatctaagtgtgttggtttgttgttcgtcgtcttgtgcggcgctgtttgatttctcgtcttcttgcggtgttcatttgattcatattgaa- 42067061  T
Q  109 gatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcat 207  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42067060 gatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggaagccatgaatattccggtcactttaattttatcatatatttttgtaggcat 42066962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 7 - 209
Target Start/End: Original strand, 6558854 - 6559056
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| || ||||||| |||||| | |||| || ||||||| ||||||||||| ||||    
T  6558854 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtacgacgttgttcgatttcccgtcttcgtgcggtgttcatttgattcattttga 6558953  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    || |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||    
T  6558954 aaaatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgcaagca 6559053  T
Q  207 tta 209  Q
    |||    
T  6559054 tta 6559056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 7 - 209
Target Start/End: Complemental strand, 22927970 - 22927768
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| | ||||  | ||||||| |||| |||| ||||||    
T  22927970 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattcctattga 22927871  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  22927870 aagatcgattattcaatcaaagatttggacgtcaacgttgcagatccggaggccatggatattccggtgactttaattttatcatatatttttgtaggca 22927771  T
Q  207 tta 209  Q
    |||    
T  22927770 tta 22927768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 9 - 209
Target Start/End: Complemental strand, 35667330 - 35667130
Alignment:
Q  9 tgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaa 108  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||  | ||||  | ||||||| ||||||||||||||||||    
T  35667330 tgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttttttgattttccgtcttcttgcggtgttcatttgattcatattgaaa 35667231  T
Q  109 gatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatt 208  Q
    |||||||||||||||||| |||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  35667230 gatcgattattcaatcaacgatttgagcgtcaatgttgcagattcggaggccatggatattccggtcactttaattttatcatatatttttgtatgcatt 35667131  T
Q  209 a 209  Q
    |    
T  35667130 a 35667130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 7 - 209
Target Start/End: Complemental strand, 1448930 - 1448728
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||  | ||||||| ||||||||||||||||    
T  1448930 tgtgatttcatcatctaagtgtggttgtttgttgttcgtcgtattgtgcggcgttgtttgatttctcgtcttcttgcggtgttcatttgattcatattga 1448831  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    |||||| ||||||||||||||||||||   ||||||||||||||||||||  | ||| |||||||| |||||||||||||||||||||||||||||||||    
T  1448830 aagatccattattcaatcaaagatttggatgtcaacgttgcagatccggaccctatggatattccgatcactttaattttatcatatatttttgtaggca 1448731  T
Q  207 tta 209  Q
    |||    
T  1448730 tta 1448728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 7 - 209
Target Start/End: Complemental strand, 35496275 - 35496073
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||| | || | || ||||||| |||||||| |||||||    
T  35496275 tgtgatttcatcatctaagtgtggtggtttgttgttcatcgtcttgtgcggcgttgtttcatttcccgtcctcgtgcggtgttcatttgatttatattga 35496176  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||    
T  35496175 aagatcgattattcaatcgaagatttgggcgtcaacgttgcagatccggaggccatggatatttcggtcactttaatttcatcatatatttttgtaggca 35496076  T
Q  207 tta 209  Q
    |||    
T  35496075 tta 35496073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 7 - 209
Target Start/End: Original strand, 26492342 - 26492544
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    ||||||||||||||||||||||||||||||||||| || ||| |||||| ||||||||||||||| | |||| |  || |||| ||||||||||||||||    
T  26492342 tgtgatttcatcatctaagtgtggtggtttgttgtccgccgtcttgtgctgcgttgtttgatttcccgtcttcgcgcgatgttcatttgattcatattga 26492441  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    ||| ||||||||||||||||||||||| |||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||    
T  26492442 aaggtcgattattcaatcaaagatttgggcgtcaacgttgcagatccggatgccttggatattccggtcactttaattttatcatatatttttgtaggca 26492541  T
Q  207 tta 209  Q
    |||    
T  26492542 tta 26492544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 11 - 209
Target Start/End: Original strand, 46821996 - 46822194
Alignment:
Q  11 atttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaaga 110  Q
    |||||||||||||||| ||||| ||||||||||||| | |||||||||||||||||||||| | |||| || ||||||| |||||||||||||| |||||    
T  46821996 atttcatcatctaagtatggtgatttgttgttcgtcttcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattaaaaga 46822095  T
Q  111 tcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||    
T  46822096 tcgattgttcaatcaaagatttgggcgtcaacgttgcagatccggaggcaatgaatattccgatcactttaatttcatcatatatttttgtaggcatta 46822194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 13 - 209
Target Start/End: Original strand, 23786558 - 23786754
Alignment:
Q  13 ttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatc 112  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||  | ||||||| ||||||||||||||||||||||    
T  23786558 ttcatcatctaagtgtggtggtttgttgttcgtcgtcttctgcggcgttgtttgatttctcgtcttcttgcggtgttcatttgattcatattgaaagatc 23786657  T
Q  113 gattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    |||||||||||||||||||| | |||||||||| ||||||| |||| |||| ||||||| |||||||||||||||||||||||||||||| ||||||    
T  23786658 gattattcaatcaaagatttaaacgtcaacgttccagatcccgaggtcatggatattcctgtcactttaattttatcatatatttttgtatgcatta 23786754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 7 - 209
Target Start/End: Complemental strand, 433792 - 433589
Alignment:
Q  7 tgtgatttcatcatctaagtgtgg-tggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattg 105  Q
    |||||||||||||||||||||||| ||||||||||||||| || |||||| |||||||||| |||||| ||||  ||| ||||| |||| |||| |||||    
T  433792 tgtgatttcatcatctaagtgtgggtggtttgttgttcgttgtcttgtgcagcgttgtttgctttctcgtcttcttacagtgttcattttattcctattg 433693  T
Q  106 aaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggc 205  Q
    ||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  433692 aaagatcgattattcaatcaaagatttggacgttaacgttgcagatccggaggccatgaatattccggtgactttaattttatcatatatttttgtaggc 433593  T
Q  206 atta 209  Q
    ||||    
T  433592 atta 433589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 7 - 209
Target Start/End: Original strand, 23085498 - 23085700
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||| |||||||||||||||||||||||||||||||||  |||||||| ||||||| |||| | ||||  | ||||||| |||| |||||||||||    
T  23085498 tgtgattttatcatctaagtgtggtggtttgttgttcgtcgtcatgtgcggcattgtttgctttcccgtcttcttgcggtgttcattttattcatattga 23085597  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||| |||||||||| |||||||||||||||||||||||||||||||    
T  23085598 aagatcgattattcaatcaaagatttgaacgtcaacgttgcagatctggagaccatggatattccggtgactttaattttatcatatatttttgtaggca 23085697  T
Q  207 tta 209  Q
    |||    
T  23085698 tta 23085700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 7 - 209
Target Start/End: Original strand, 26583691 - 26583888
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||   |||| || |  |||| ||||||||||||||||    
T  26583691 tgtgatttcatcatctaagtgtggtggtttgttgttcatcgtcttgtgcggcgttgtttgatttccagtcttcgtgcaatgttcatttgattcatattga 26583790  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    |||||||||||||||||||||||     ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  26583791 aagatcgattattcaatcaaaga-----gcgtcaacgttgcagattcggaggtcatgaatattccggtcactttaattttatcatatatttttgtaggca 26583885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 7 - 209
Target Start/End: Original strand, 42311257 - 42311459
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||| ||||||||| ||||||||||||||||| || ||| ||||||||||||||  | |||| || || |||| ||||||||||||||||    
T  42311257 tgtgatttcatcatttaagtgtggcggtttgttgttcgtcgtcttatgcagcgttgtttgattttccgtcttcgtgcgatgttcatttgattcatattga 42311356  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| |||    
T  42311357 aagatcgattattcaatcaaagatttggccgtcaacgttgcagatccggaggtcatggatattccggtcactttaattttatcatatatttttgtacgca 42311456  T
Q  207 tta 209  Q
    |||    
T  42311457 tta 42311459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 7 - 209
Target Start/End: Complemental strand, 45199132 - 45198931
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| | ||||  | ||||||| || |||||||| ||||    
T  45199132 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgttttgtgcggcgctgtttgatttcccgtcttcttgcggtgttcatctgattcattttga 45199033  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    | ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| |    
T  45199032 a-gatcggttattcaatcaaagatttgggcgtcaacgttgcagatccggaggccatggatattccggtcactttgattttatcatatatttttgtaggta 45198934  T
Q  207 tta 209  Q
    |||    
T  45198933 tta 45198931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 7 - 209
Target Start/End: Original strand, 48207878 - 48208079
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||| ||| ||||||||||| | ||||  | ||||||| ||||||||||| ||||    
T  48207878 tgtgatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgctgcgctgtttgatttcccgtcttcttgcggtgttcatttgattcattttga 48207977  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    | |||| ||||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  48207978 a-gatccattatacaatcaaagatttgggcgtcaacgttgcagatccggaggccatggatattccggtcactttaattttatcatatatttttgttggca 48208076  T
Q  207 tta 209  Q
    |||    
T  48208077 tta 48208079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 7 - 195
Target Start/End: Original strand, 42408339 - 42408527
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||  | |||| || |||| || ||||||||||||||||    
T  42408339 tgtgatttcatcatttaagtgtggtggtttgttgttcgtcgtcttgtgcagcgttgtttgattttccgtcttcgtgcggtattcatttgattcatattga 42408438  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatat 195  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| | |||||| |||||||| ||||||||||||||||||||||    
T  42408439 aagatcgattattcaatcaaagatttgggcgtcaacgttgcagatccgaatgccatggatattccgatcactttaattttatcatatat 42408527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 34 - 209
Target Start/End: Original strand, 32684672 - 32684847
Alignment:
Q  34 tttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttg 133  Q
    ||||||||||||||| |||||||||||||||||||||| | |||| || ||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  32684672 tttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtctttgtgcggtgttcatttgattcatattgaaatatcgattattcaatcaaagatttg 32684771  T
Q  134 agcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
     ||||||||||| |||||| |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  32684772 ggcgtcaacgttacagatctggaggccatggatattccggtcactttagttttatcatatatttttgtaggcatta 32684847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 11 - 209
Target Start/End: Original strand, 46339035 - 46339233
Alignment:
Q  11 atttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaaga 110  Q
    |||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||||||  | |||| |||||||||| ||||||||||||||||||||    
T  46339035 atttcatcatttaagtgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtacggtgttcatttgattcatattgaaaga 46339134  T
Q  111 tcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    || ||| |||||||||||||||| ||||||||||||||||| || |||| ||| ||||||||||||||||||||| |||||||||||||| | ||||||    
T  46339135 tctattgttcaatcaaagatttgggcgtcaacgttgcagattcgaaggcaatggatattccggtcactttaatttcatcatatatttttgcatgcatta 46339233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 11 - 209
Target Start/End: Original strand, 34773692 - 34773890
Alignment:
Q  11 atttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaaga 110  Q
    |||| ||||||||||||||||| |||||| |||||||| || |||||||||||||||||||   ||||  | ||||||| ||||||||||||||||||||    
T  34773692 atttgatcatctaagtgtggtgatttgttattcgtcgtcttatgcggcgttgtttgatttcctgtcttcttgcggtgttcatttgattcatattgaaaga 34773791  T
Q  111 tcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    |||||  |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||| ||||||||||||| |||||||||||||||||||||||    
T  34773792 tcgatcgttcaatcaaagatttgggcgtcaacgttgcagatccggaggcaatggatattccagtcactttaatttcatcatatatttttgtaggcatta 34773890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 7 - 209
Target Start/End: Complemental strand, 1485357 - 1485154
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| |||| ||||||  | |||| || |||| ||||  |||||    
T  1485357 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcagcgttgtttgttttcccatcttcttgcggtattcattttattccaattga 1485258  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaa-ttttatcatatatttttgtaggc 205  Q
    || ||||||||||||||||||||||||  ||||||| |||||||||||||||||||| |||||||||| ||||||| |||| ||||||||||||||||||    
T  1485257 aaaatcgattattcaatcaaagatttggacgtcaacattgcagatccggaggccatggatattccggtgactttaatttttttcatatatttttgtaggc 1485158  T
Q  206 atta 209  Q
    ||||    
T  1485157 atta 1485154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 7 - 209
Target Start/End: Complemental strand, 17223099 - 17222898
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||||||||||||||| |||||||||| |||| ||||||||||| |||||||||  | ||||  | || |||| ||||||||||||||||    
T  17223099 tgtgatttcatcatctaagtgtggtgatttgttgttcatcgtcttgtgcggcgtggtttgattttccttcttcatgcg-tgttcatttgattcatattga 17223001  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    |||||||||||||||||||||||||||   |||||||||||||||  | |||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  17223000 aagatcgattattcaatcaaagatttggatgtcaacgttgcagatttgaaggccatggatattctggtcactttaattttatcatatatttttgtaggca 17222901  T
Q  207 tta 209  Q
    |||    
T  17222900 tta 17222898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 7 - 209
Target Start/End: Original strand, 20116559 - 20116761
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||| ||  |||||| |||||||||||||||| ||||||| |||||||||||||  | ||||  | ||||||| ||||||||||||||||    
T  20116559 tgtgatttcatcatatacatgtggttgtttgttgttcgtcgtcttgtgcgtcgttgtttgatttaccgtcttcttgcggtgttcatttgattcatattga 20116658  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    |||||||||||||||||||||  |||| |||||||||||||||| || |||| |||  |||||||||||||||||||||||||| |||||||||||||||    
T  20116659 aagatcgattattcaatcaaaactttgggcgtcaacgttgcagacccagaggtcatagatattccggtcactttaattttatcaaatatttttgtaggca 20116758  T
Q  207 tta 209  Q
    |||    
T  20116759 tta 20116761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 11 - 209
Target Start/End: Complemental strand, 2843325 - 2843139
Alignment:
Q  11 atttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaaga 110  Q
    |||||||||||||||||||||| |||||||||||||||            ||||||||||| | |||| || ||||||| ||||||||||||||||||||    
T  2843325 atttcatcatctaagtgtggtgatttgttgttcgtcgt------------tgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaaga 2843238  T
Q  111 tcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  2843237 tcgattgttcaatcaaagatttgagcgtcaatgttgcagatccggaggcaatggatattccggtcactttaatttcatcatatatttttgtaggcatta 2843139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 9 - 209
Target Start/End: Original strand, 21266369 - 21266569
Alignment:
Q  9 tgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctca-tcttagtacggtgtttatttgattcatattgaa 107  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||||| | || ||| | || ||  ||||  | ||||||| || ||||||||||||||    
T  21266369 tgatttcatcatctaagtgtggtggtttgttattcgtcgtcttgtgcgacatttttttaattttccgtcttcttgcggtgttcatctgattcatattgaa 21266468  T
Q  108 agatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcat 207  Q
     |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||||||    
T  21266469 -gatcgattattcaatcaaagatttgagcatcaacgttgcagatccggaggccatgaatatttcggtgactttagttttatcatatatttttgtaggcat 21266567  T
Q  208 ta 209  Q
    ||    
T  21266568 ta 21266569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 39 - 202
Target Start/End: Original strand, 19560007 - 19560170
Alignment:
Q  39 tgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgt 138  Q
    |||||||||| |||||||||||||||||||||||||| ||  |   ||||| ||||||||||||||||||||| |||||||||||||||||||||  |||    
T  19560007 tgttcgtcgtcttgtgcggcgttgtttgatttctcattttcttgatgtgttcatttgattcatattgaaagattgattattcaatcaaagatttggacgt 19560106  T
Q  139 caacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgta 202  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  19560107 caaccttgcagatccggagaccatgaatattccggtcactttaattttatcatatatttttgta 19560170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 8 - 209
Target Start/End: Original strand, 6001999 - 6002208
Alignment:
Q  8 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaa 107  Q
    |||||||| |||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||| | |     ||||||| |||||||||||||||||    
T  6001999 gtgatttcgtcatctgagtgtggcggtttgttgttcgtcgtcttgtgcggcgttgtttgatttctcgtatcgtcgcggtgttcatttgattcatattgaa 6002098  T
Q  108 agatcgattattcaatcaaagatttgagcgtcaacgttgcagatcc--------ggaggccatgaatattccggtcactttaattttatcatatattttt 199  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||        ||| | ||||| |||||||||||| ||||||||||||| |||||||    
T  6002099 agatcaattattcaatcaaagatttgagcgtcaacgttgcagatccgaaggtatggaagacatgagtattccggtcaccttaattttatcatgtattttt 6002198  T
Q  200 gtaggcatta 209  Q
    ||||||||||    
T  6002199 gtaggcatta 6002208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 7 - 209
Target Start/End: Complemental strand, 23425472 - 23425271
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||||||| | ||||||||||| | ||||  | ||||||| || ||||| || ||||    
T  23425472 tgtgatttcatcatttaagtgtggtggtttgttgttcgtcgtcttgtgcggtgctgtttgatttcccgtcttcttgcggtgttcatctgatttattttga 23425373  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    | ||||||||||| || |||||||||| || |||| ||||||||||||||||||||| ||||||  ||||||||| ||||||||||||||||||||||||    
T  23425372 a-gatcgattattaaaacaaagatttgggcatcaatgttgcagatccggaggccatggatattctagtcactttacttttatcatatatttttgtaggca 23425274  T
Q  207 tta 209  Q
    |||    
T  23425273 tta 23425271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 8 - 209
Target Start/End: Complemental strand, 31235891 - 31235682
Alignment:
Q  8 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaa 107  Q
    |||||||| |||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||| | |   | ||||||| |||||||||||||||||    
T  31235891 gtgatttcgtcatctaagtgtggcggtttgttgttcgtcgtcttgtgcagcgttgtttgatttctcgtatcgttgcggtgttcatttgattcatattgaa 31235792  T
Q  108 agatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggc--------catgaatattccggtcactttaattttatcatatattttt 199  Q
    ||||| ||||||||||||||  ||||||||||||||||||| ||||||||||        ||||  ||||||| |||||||||||||||||| |||||||    
T  31235791 agatcaattattcaatcaaatctttgagcgtcaacgttgcaaatccggaggcatggaagacatgggtattccgatcactttaattttatcatgtattttt 31235692  T
Q  200 gtaggcatta 209  Q
    ||||||||||    
T  31235691 gtaggcatta 31235682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 8 - 209
Target Start/End: Original strand, 35261277 - 35261476
Alignment:
Q  8 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaa 107  Q
    |||||||| ||||| ||||||||| || ||||||||||||| |  ||| || || ||||||||  | |||| || | ||||| |||||||||||||| ||    
T  35261277 gtgatttcgtcatccaagtgtggttgtgtgttgttcgtcgtctcctgcagcattatttgattttccgtctttgtgc-gtgttcatttgattcatattaaa 35261375  T
Q  108 agatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcat 207  Q
    |||||||||||||||||||||||||   |||||| |||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||    
T  35261376 agatcgattattcaatcaaagatttagacgtcaatgttgcagatccggagg-catgtgtattccggtcactttaattttatcatatatttttgtaggcat 35261474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 7 - 209
Target Start/End: Complemental strand, 7640872 - 7640673
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatatt-g 105  Q
    |||||||||||||||||||||||||||||||||| ||||||  ||||| ||||||||||| |||| ||||||  | ||    | |||| ||||| ||| |    
T  7640872 tgtgatttcatcatctaagtgtggtggtttgttgctcgtcgccttgtgaggcgttgtttgctttcccatcttcttgcg----tcattttattcacatttg 7640777  T
Q  106 aaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggc 205  Q
    |||||||||||||||||||||| ||||| |||||||| ||||| ||| ||| | |||| |||||| |||||||||||||| ||||||||||||| |||||    
T  7640776 aaagatcgattattcaatcaaatatttgggcgtcaacattgcaaatctggatgtcatggatattctggtcactttaatttcatcatatatttttataggc 7640677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 100 - 209
Target Start/End: Complemental strand, 13592515 - 13592407
Alignment:
Q  100 atattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatattttt 199  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||  ||||| ||||||||||||||||||||||||||||    
T  13592515 atattggaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggatg-catgggtattctggtcactttaattttatcatatattttt 13592417  T
Q  200 gtaggcatta 209  Q
    ||||||||||    
T  13592416 gtaggcatta 13592407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 18 - 209
Target Start/End: Complemental strand, 32522016 - 32521827
Alignment:
Q  18 catctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgatta 117  Q
    ||||| |||||||| || ||||||||||| | |||||||||||||||||||||  | | ||  |  |||||| |||||||||||||||||||||| ||||    
T  32522016 catctgagtgtggttgtgtgttgttcgtcatcttgtgcggcgttgtttgattttccgttttgttgtggtgttcatttgattcatattgaaagatcaatta 32521917  T
Q  118 ttcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    |||||||||||||||  || |||| ||||| | ||||  || ||||| |||||| | |||||| ||||||||||||||||||||||||||||    
T  32521916 ttcaatcaaagatttaggcatcaatgttgctgttccg--gggcatgagtattccagacacttttattttatcatatatttttgtaggcatta 32521827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 44 - 209
Target Start/End: Original strand, 20083352 - 20083517
Alignment:
Q  44 gtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacg 143  Q
    ||||| ||||| | |||||||||||||| | ||||  | ||||||| | ||| || || |||||||||||||| |||||||||||||||| |||||||||    
T  20083352 gtcgtcttgtgagacgttgtttgatttcccgtcttgttgcggtgttcagttgttttattttgaaagatcgatt-ttcaatcaaagatttgggcgtcaacg 20083450  T
Q  144 ttgcagatccggaggcca-tgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    ||||| |||||||| |   ||| |||||||||||||||| |||||||||||||||||||||||||||    
T  20083451 ttgcatatccggagacatgtgagtattccggtcactttagttttatcatatatttttgtaggcatta 20083517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 9 - 202
Target Start/End: Complemental strand, 46818514 - 46818324
Alignment:
Q  9 tgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaa 108  Q
    ||||||| |||||  ||||||| |||  ||||||||   | |||||||||||||||||||||||| | ||  | ||||||| |||| ||||||||| |||    
T  46818514 tgatttcgtcatccgagtgtggcggtgcgttgttcgaaatcttgtgcggcgttgtttgatttctcgtattgttgcggtgttcatttaattcatattaaaa 46818415  T
Q  109 gatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgta 202  Q
    |||||||| |||| ||||||| ||| ||| ||||||||||||||| || | ||||  ||||||| |||||||||||||||||||||||||||||    
T  46818414 gatcgattgttcagtcaaagaattg-gcg-caacgttgcagatccaga-gtcatgtgtattccgttcactttaattttatcatatatttttgta 46818324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 17611103 - 17611234
Alignment:
Q  8 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaa 107  Q
    |||||||| |||||  ||||||||||| |||| |||||||| |||||||| ||||||||||||    ||||  | | ||||| |||||||||||||||||    
T  17611103 gtgatttcgtcatccgagtgtggtggtgtgttattcgtcgtcttgtgcggagttgtttgattttctgtcttgttgcagtgttcatttgattcatattgaa 17611202  T
Q  108 agatcgattattcaatcaaagatttgagcgtc 139  Q
    |||| |||||||||||||||||||||||||||    
T  17611203 agattgattattcaatcaaagatttgagcgtc 17611234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 84 - 208
Target Start/End: Complemental strand, 46244292 - 46244171
Alignment:
Q  84 ggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaat 183  Q
    |||||| ||||| ||| |||||||| |||| ||||||| |||| |||||||||||||||||||||| | | || | |||  |||||  ||||||||||||    
T  46244292 ggtgttcatttggttcctattgaaaaatcggttattca-tcaatgatttgagcgtcaacgttgcaggttc-gaagacattgatattttggtcactttaat 46244195  T
Q  184 tttatcatatatttttgtaggcatt 208  Q
    |||||||||| | ||||||||||||    
T  46244194 tttatcatat-tatttgtaggcatt 46244171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 61 - 111
Target Start/End: Original strand, 3266540 - 3266590
Alignment:
Q  61 tgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||||||||| ||||||||||||||||||||||||||  |||||||||    
T  3266540 tgtttgatttctcgtcttagtacggtgtttatttgattcaggttgaaagat 3266590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 117 - 207
Target Start/End: Complemental strand, 17499670 - 17499581
Alignment:
Q  117 attcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcat 207  Q
    ||||||||||||||||| || ||||||||| |||||   ||   | || |||||| |||||||||||||||||||||||||||||||||||    
T  17499670 attcaatcaaagatttgggcatcaacgttggagatctatagat-acgagtattccagtcactttaattttatcatatatttttgtaggcat 17499581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 117 - 207
Target Start/End: Original strand, 17553544 - 17553633
Alignment:
Q  117 attcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcat 207  Q
    ||||||||||||||||| || ||||||||| |||||   ||   | || |||||| |||||||||||||||||||||||||||||||||||    
T  17553544 attcaatcaaagatttgggcatcaacgttggagatctatagat-acgagtattccagtcactttaattttatcatatatttttgtaggcat 17553633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 91 - 193
Target Start/End: Complemental strand, 43369788 - 43369687
Alignment:
Q  91 atttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatca 190  Q
    ||||| ||| |||||||||||||  ||||||||||| | |||   | ||||||||||||||||||| || |||| |||||  ||||||||||||||||||    
T  43369788 atttggttcctattgaaagatcggctattcaatcaatggttttgtcatcaacgttgcagatccggatgc-atgagtattctagtcactttaattttatca 43369690  T
Q  191 tat 193  Q
    |||    
T  43369689 tat 43369687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 108
Target Start/End: Complemental strand, 969578 - 969478
Alignment:
Q  8 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaa 107  Q
    ||||||||||| | | | ||||| | | ||||||||||||| || ||||||||||||||||||  | ||||| | |||||||| |||| |||||||||||    
T  969578 gtgatttcatcgtttgaatgtggcgttgtgttgttcgtcgtcttttgcggcgttgtttgattttgcgtcttattgcggtgtttgtttggttcatattgaa 969479  T
Q  108 a 108  Q
    |    
T  969478 a 969478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 63 - 111
Target Start/End: Original strand, 9785473 - 9785521
Alignment:
Q  63 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||||||||||||||| ||||||||||||||||||  |||||||||    
T  9785473 tttgatttctcatcttagtgcggtgtttatttgattcaggttgaaagat 9785521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 63 - 111
Target Start/End: Complemental strand, 45457521 - 45457473
Alignment:
Q  63 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||||||| ||||||||||||||||||||||||||  |||||||||    
T  45457521 tttgatttctcgtcttagtacggtgtttatttgattcaggttgaaagat 45457473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 209
Target Start/End: Original strand, 17611245 - 17611288
Alignment:
Q  166 tattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    |||| |||||| ||||||||||||||||||||||||||||||||    
T  17611245 tatttcggtcattttaattttatcatatatttttgtaggcatta 17611288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 78
Target Start/End: Original strand, 28476211 - 28476253
Alignment:
Q  36 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatctt 78  Q
    ||||||||||||| |||||||||||||||||||||| ||||||    
T  28476211 tgttgttcgtcgtcttgtgcggcgttgtttgatttcgcatctt 28476253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 37837587 - 37837533
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgtt 61  Q
    ||||||||||||||||||||| || | | ||||||||||||| ||||||||||||    
T  37837587 tgtgatttcatcatctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt 37837533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 153
Target Start/End: Original strand, 22743027 - 22743063
Alignment:
Q  117 attcaatcaaagatttgagcgtcaacgttgcagatcc 153  Q
    |||||||||| ||||||||||||||||||||||||||    
T  22743027 attcaatcaatgatttgagcgtcaacgttgcagatcc 22743063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 111
Target Start/End: Complemental strand, 36579306 - 36579258
Alignment:
Q  63 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||||| | ||||||| |||||||||||||||||| ||||||||||    
T  36579306 tttgatttcccgtcttagtgcggtgtttatttgattcagattgaaagat 36579258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 114
Target Start/End: Complemental strand, 3267327 - 3267237
Alignment:
Q  21 ctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcga 114  Q
    ||||||| || | ||||||||||||||| ||||||| ||||   ||||||| | |||||  ||||||||  ||| |||||||||||||||||||    
T  3267327 ctaagtgcggcgttttgttgttcgtcgtcttgtgcgacgtt---tgatttcgcgtcttatcacggtgttcgtttaattcatattgaaagatcga 3267237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 71
Target Start/End: Original strand, 3394434 - 3394497
Alignment:
Q  8 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttc 71  Q
    ||||||||||| ||| |||| |||| | ||||||||||||| ||||| || |||||||||||||    
T  3394434 gtgatttcatcgtctgagtgcggtgttgtgttgttcgtcgtcttgtgtggtgttgtttgatttc 3394497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 70
Target Start/End: Complemental strand, 17499759 - 17499696
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgattt 70  Q
    |||||||||||||||||||||| ||||| | ||||||  ||| ||||||| | |||||||||||    
T  17499759 tgtgatttcatcatctaagtgtagtggtgtattgttcaccgtcttgtgcgacattgtttgattt 17499696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 17553455 - 17553518
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgattt 70  Q
    |||||||||||||||||||||| ||||| | ||||||  ||| ||||||| | |||||||||||    
T  17553455 tgtgatttcatcatctaagtgtagtggtgtattgttcaccgtcttgtgcgacattgtttgattt 17553518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 71
Target Start/End: Original strand, 22742928 - 22742963
Alignment:
Q  36 tgttgttcgtcgtattgtgcggcgttgtttgatttc 71  Q
    ||||||||||||| ||||||||||||||||||||||    
T  22742928 tgttgttcgtcgtcttgtgcggcgttgtttgatttc 22742963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 71
Target Start/End: Complemental strand, 24350944 - 24350909
Alignment:
Q  36 tgttgttcgtcgtattgtgcggcgttgtttgatttc 71  Q
    ||||||||||||| ||||||||||||||||||||||    
T  24350944 tgttgttcgtcgtcttgtgcggcgttgtttgatttc 24350909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 8001675 - 8001621
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgtt 61  Q
    ||||||||| || |||||||| || | ||||||||||||||| ||||||||||||    
T  8001675 tgtgatttcgtcgtctaagtgcggcgttttgttgttcgtcgtcttgtgcggcgtt 8001621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 9450266 - 9450212
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgtt 61  Q
    ||||||||| || ||||||||||| | | ||||||||||||| ||||||||||||    
T  9450266 tgtgatttcgtcgtctaagtgtggcgttgtgttgttcgtcgtcttgtgcggcgtt 9450212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 111
Target Start/End: Original strand, 41288110 - 41288160
Alignment:
Q  61 tgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||||||  | ||||||||||||||||||||||||||  |||||||||    
T  41288110 tgtttgattttccgtcttagtacggtgtttatttgattcaggttgaaagat 41288160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 208
Target Start/End: Complemental strand, 13796935 - 13796848
Alignment:
Q  119 tcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatt 208  Q
    |||| ||| ||||||| ||||||||||||||||||||| | ||||| ||||  ||| |||| | ||||||||||| | ||||||||||||    
T  13796935 tcaaccaatgatttgaccgtcaacgttgcagatccggaag-catgagtatttaggtgacttaagttttatcatat-tatttgtaggcatt 13796848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 100
Target Start/End: Original strand, 36253086 - 36253123
Alignment:
Q  63 tttgatttctcatcttagtacggtgtttatttgattca 100  Q
    ||||||||| |||||||| |||||||||||||||||||    
T  36253086 tttgatttcccatcttaggacggtgtttatttgattca 36253123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 111
Target Start/End: Complemental strand, 1281102 - 1281054
Alignment:
Q  63 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||||| | ||||||| ||||||||||||||||||  |||||||||    
T  1281102 tttgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagat 1281054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 76
Target Start/End: Complemental strand, 1749254 - 1749214
Alignment:
Q  36 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatc 76  Q
    ||||||||||||| ||||||||| |||||||||||| ||||    
T  1749254 tgttgttcgtcgtcttgtgcggcattgtttgatttcgcatc 1749214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 111
Target Start/End: Original strand, 2622752 - 2622796
Alignment:
Q  67 atttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||| |||||| || |||||||||||||||||| ||||||||||    
T  2622752 atttcccatctttgtgcggtgtttatttgattcaaattgaaagat 2622796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 111
Target Start/End: Original strand, 10094597 - 10094645
Alignment:
Q  63 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||||| | ||||||| ||||||||||||||||||  |||||||||    
T  10094597 tttgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagat 10094645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 111
Target Start/End: Original strand, 10574549 - 10574585
Alignment:
Q  75 tcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||| ||||||||||||||||||| |||||||||    
T  10574549 tcttagttcggtgtttatttgattcatgttgaaagat 10574585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 111
Target Start/End: Original strand, 11833178 - 11833222
Alignment:
Q  67 atttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||| ||||||| ||||||||||||||||||  |||||||||    
T  11833178 atttctcgtcttagtgcggtgtttatttgattcaggttgaaagat 11833222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 193
Target Start/End: Complemental strand, 19404765 - 19404690
Alignment:
Q  117 attcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatat 193  Q
    |||||||||| |||||| ||||||| |||||||||||||| | ||||| |||| | || ||||  ||||||||||||    
T  19404765 attcaatcaatgatttgggcgtcaatgttgcagatccggaag-catgagtatttcagtgacttagattttatcatat 19404690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 111
Target Start/End: Original strand, 21603616 - 21603664
Alignment:
Q  63 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||||| | ||||||| ||||||||||||||||||  |||||||||    
T  21603616 tttgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagat 21603664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 111
Target Start/End: Original strand, 21990818 - 21990866
Alignment:
Q  63 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||||| | ||||||| ||||||||||||||||||  |||||||||    
T  21990818 tttgatttcccgtcttagtgcggtgtttatttgattcagcttgaaagat 21990866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 153
Target Start/End: Complemental strand, 24350847 - 24350811
Alignment:
Q  117 attcaatcaaagatttgagcgtcaacgttgcagatcc 153  Q
    |||||||||| |||||| |||||||||||||||||||    
T  24350847 attcaatcaatgatttgggcgtcaacgttgcagatcc 24350811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 111
Target Start/End: Complemental strand, 27050424 - 27050380
Alignment:
Q  67 atttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||| ||||||| ||||||||||||||||||| | |||||||    
T  27050424 atttctcgtcttagtgcggtgtttatttgattcatgtcgaaagat 27050380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 76
Target Start/End: Original strand, 35132931 - 35132971
Alignment:
Q  36 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatc 76  Q
    ||||||||||||| |||| ||||||||||||||||| ||||    
T  35132931 tgttgttcgtcgtcttgttcggcgttgtttgatttcacatc 35132971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 153
Target Start/End: Original strand, 35133030 - 35133066
Alignment:
Q  117 attcaatcaaagatttgagcgtcaacgttgcagatcc 153  Q
    |||||||||| |||||| |||||||||||||||||||    
T  35133030 attcaatcaatgatttgggcgtcaacgttgcagatcc 35133066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 41553537 - 41553461
Alignment:
Q  36 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatc 112  Q
    ||||||||||||| ||||| | |||| ||||||||| | ||||  || ||||||  |||| ||||||||||||||||    
T  41553537 tgttgttcgtcgtcttgtgtgacgttatttgatttcgcgtcttgttatggtgttcgtttggttcatattgaaagatc 41553461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 41553882 - 41553806
Alignment:
Q  36 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatc 112  Q
    ||||||||||||| ||||| | |||| ||||||||| | ||||  || ||||||  |||| ||||||||||||||||    
T  41553882 tgttgttcgtcgtcttgtgtgacgttatttgatttcgcgtcttgttatggtgttcgtttggttcatattgaaagatc 41553806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 193
Target Start/End: Original strand, 46700118 - 46700193
Alignment:
Q  117 attcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatat 193  Q
    |||||||||| |||||| || ||| ||||||||||||||| | |||| ||||| |||| ||||  ||||||||||||    
T  46700118 attcaatcaatgatttgggcatcagcgttgcagatccggaag-catggatatttcggtgacttagattttatcatat 46700193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 111
Target Start/End: Complemental strand, 48304354 - 48304310
Alignment:
Q  67 atttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||| ||||||| ||||||||||||||||||  |||||||||    
T  48304354 atttctcgtcttagtgcggtgtttatttgattcaggttgaaagat 48304310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 76
Target Start/End: Original strand, 48930757 - 48930797
Alignment:
Q  36 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatc 76  Q
    |||| |||||||| |||||||||||||||||||||| ||||    
T  48930757 tgttattcgtcgtcttgtgcggcgttgtttgatttcgcatc 48930797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 171; Significance: 6e-92; HSPs: 76)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 7 - 209
Target Start/End: Original strand, 28035120 - 28035322
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | |||| |||||||||| ||||||||||||||||    
T  28035120 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtacggtgttcatttgattcatattga 28035219  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  28035220 aagatcgattattcaatcaaagatttgggcgtcaacattgcagatccggaggccatgaatattccggtcactttaattttatcataaatttttgtaggca 28035319  T
Q  207 tta 209  Q
    |||    
T  28035320 tta 28035322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 7 - 209
Target Start/End: Complemental strand, 45426166 - 45425964
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| | || ||||||| ||||||||||||| ||    
T  45426166 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttcccatcatcgtgcggtgttcatttgattcatatcga 45426067  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  45426066 aagatcgattattcaatcaaaaatttgagcgtcaacgttgcagatccgaaggccatgaatatttcggtcactttaattttatcatatatttttgtaggca 45425967  T
Q  207 tta 209  Q
    |||    
T  45425966 tta 45425964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 7 - 209
Target Start/End: Complemental strand, 9687304 - 9687103
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| ||||||  | ||||||| ||||||||||||||||    
T  9687304 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcatcttgtgcggcgttgtttgatttcccatcttcttgcggtgttcatttgattcatattga 9687205  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9687204 aagatcgattattcaatcaaagatttgggcgtcaa-gttgcagatccagaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 9687106  T
Q  207 tta 209  Q
    |||    
T  9687105 tta 9687103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 10 - 209
Target Start/End: Complemental strand, 40881109 - 40880911
Alignment:
Q  10 gatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaag 109  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | |||| || ||||||| |||||||||||||| |||     
T  40881109 gatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattaaaa- 40881011  T
Q  110 atcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  40881010 atcgattattcaatcaaagatttgggcgtcaacgttgcagatccgaaggccatggatattctggtcactttaattttatcatatatttttgtaggcatta 40880911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 7 - 209
Target Start/End: Complemental strand, 50272240 - 50272038
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||| ||||||| ||||| ||||||||||||||| |||||||||||||||||||||| | |||| || ||||||| ||||||||||||||||    
T  50272240 tgtgatttcatcttctaagtttggtgatttgttgttcgtcgttttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattga 50272141  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    || |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||    
T  50272140 aaaatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggaggcaatgaatattccagtcactttaattttgtcatatatttttgtaggca 50272041  T
Q  207 tta 209  Q
    |||    
T  50272040 tta 50272038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 7 - 209
Target Start/End: Complemental strand, 5324658 - 5324456
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||||||||  |||||||||||| | ||||  | ||||||| ||||||||||||||||    
T  5324658 tgtgatttcatcatctaagtgtggtggtttgttgttcgccgtcttgtgcggtattgtttgatttcccgtctttttgcggtgttcatttgattcatattga 5324559  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    || |||||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  5324558 aaaatcgattattcaatcaaagatttgggcgtcaacgttgcagatccgggggccatggatatttcggtcactttaattttatcatatatttttgtaggca 5324459  T
Q  207 tta 209  Q
    |||    
T  5324458 tta 5324456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 11 - 209
Target Start/End: Original strand, 7997774 - 7997972
Alignment:
Q  11 atttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaaga 110  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| | |||| || | ||||| |||||||||||||||||| |    
T  7997774 atttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcagtgttcatttgattcatattgaaata 7997873  T
Q  111 tcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    |||||| ||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  7997874 tcgattgttcaaccaaagatttgggcgtcaacgttgcagatccggaggcaatgaatattccggtcactttaatttcatcatatatttttgtaggcatta 7997972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 7 - 209
Target Start/End: Complemental strand, 51868745 - 51868543
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||  | ||||||| |||| |||| ||||||    
T  51868745 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgctttctcgtcttcttgcggtgttcattttattcttattga 51868646  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    |||||||||||||||||||||||||||  ||||||||||||||||| |||| |||||||||||||| | |||||||||||||||||||||||||||||||    
T  51868645 aagatcgattattcaatcaaagatttggacgtcaacgttgcagatctggagaccatgaatattccgatgactttaattttatcatatatttttgtaggca 51868546  T
Q  207 tta 209  Q
    |||    
T  51868545 tta 51868543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 7 - 209
Target Start/End: Original strand, 51871844 - 51872046
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||  | ||||  | ||||||| |||| |||| ||||||    
T  51871844 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcgacgttgtttgcttttccgtcttcttgcggtgttcattttattcttattga 51871943  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  51871944 aagatcgattattcaatcaaatatttgaacgtcaacgttgcagatccggaggccatggatattccggtgactttaattttatcatatatttttgtaggca 51872043  T
Q  207 tta 209  Q
    |||    
T  51872044 tta 51872046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 6 - 209
Target Start/End: Original strand, 9172470 - 9172673
Alignment:
Q  6 gtgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattg 105  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| | ||||  | ||||||| |||| |||| |||||    
T  9172470 gtgtgattttatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattcctattg 9172569  T
Q  106 aaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggc 205  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||| |||||    
T  9172570 aaagatcgattattcaatcaaagatttggacgtcaacgttgcagatccggaggccatagatattccggtgactttaattttatcatatatttttataggc 9172669  T
Q  206 atta 209  Q
    ||||    
T  9172670 atta 9172673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 6 - 209
Target Start/End: Original strand, 9180452 - 9180655
Alignment:
Q  6 gtgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattg 105  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| | ||||  | ||||||| |||| |||| |||||    
T  9180452 gtgtgattttatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattcctattg 9180551  T
Q  106 aaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggc 205  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||| |||||    
T  9180552 aaagatcgattattcaatcaaagatttggacgtcaacgttgcagatccggaggccatagatattccggtgactttaattttatcatatatttttataggc 9180651  T
Q  206 atta 209  Q
    ||||    
T  9180652 atta 9180655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 9 - 209
Target Start/End: Original strand, 34519115 - 34519311
Alignment:
Q  9 tgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaa 108  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||  |  |||||| ||||||||||||||||||    
T  34519115 tgatttcatcatctaagtgtggtggtttgttgttcgtcgttttgtgcggcgttgtttgatttctcgtcttcttgtggtgttcatttgattcatattgaaa 34519214  T
Q  109 gatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatt 208  Q
    |||||||||||||||||| ||||||  |    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  34519215 gatcgattattcaatcaacgatttggac----acgttgcagatccggaggccatggatattccggtcactttaattttatcatatatttttgtatgcatt 34519310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 11 - 209
Target Start/End: Original strand, 5701244 - 5701442
Alignment:
Q  11 atttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaaga 110  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| | |||| || ||||||| |||||||||||||||||| |    
T  5701244 atttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaata 5701343  T
Q  111 tcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    |||||| |||||||||||||||| || |||||||||||||||||||| | ||| ||||||||||||||||||||| ||||||||||| |||||||||||    
T  5701344 tcgattgttcaatcaaagatttgggcatcaacgttgcagatccggagacaatggatattccggtcactttaatttcatcatatatttgtgtaggcatta 5701442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 7 - 209
Target Start/End: Original strand, 7342703 - 7342905
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| | ||||  | || |||| |||| |||| ||||||    
T  7342703 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgttttcccgtcttcttgcgttgttcattttattcctattga 7342802  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||| ||||||    
T  7342803 aagatcgattattcaatcaaagatttggacgtcaacgttgcagatccggagaccatggatattccggtgactttaattttatcatatatttttataggca 7342902  T
Q  207 tta 209  Q
    |||    
T  7342903 tta 7342905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 7 - 209
Target Start/End: Complemental strand, 33291518 - 33291316
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||  | || | || ||||||| ||||||||||||||||    
T  33291518 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgattttccgtcgtcgtgcggtgttcatttgattcatattga 33291419  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    |||||   | ||||||||||||||||| ||||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  33291418 aagataagtaattcaatcaaagatttgggcgtcaacgttgcagattcggaggcgatggatattccggtcactttaattttatcatatatttttgtaggca 33291319  T
Q  207 tta 209  Q
    |||    
T  33291318 tta 33291316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 7 - 209
Target Start/End: Complemental strand, 50166199 - 50165997
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||| ||||  | ||||||| |||| |||| ||||||    
T  50166199 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttatttgctttctcgtcttcttgcggtgttcattttattcctattga 50166100  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    |||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||  ||||| ||| |||||||||||||||||||||||||||||||    
T  50166099 aagatcgattattcaatcaaagatttggacgtcaacgttgtagatccggaggccatgggtattctggtgactttaattttatcatatatttttgtaggca 50166000  T
Q  207 tta 209  Q
    |||    
T  50165999 tta 50165997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 7 - 209
Target Start/End: Original strand, 11453916 - 11454118
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||| | ||||  | |||| || ||||||||||| ||||    
T  11453916 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcagcgctgtttgatttcccgtctttttgcggtattcatttgattcatcttga 11454015  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||||||| |||  |||||| |||||||||||||||||||||||||| ||||||||    
T  11454016 aagagcgattattcaatcaaagatttgagcgtcaacattgcagatccggaggtcatagatattctggtcactttaattttatcatatatttatgtaggca 11454115  T
Q  207 tta 209  Q
    |||    
T  11454116 tta 11454118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 19 - 209
Target Start/End: Complemental strand, 35584706 - 35584516
Alignment:
Q  19 atctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattat 118  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||||||  | |||| || ||||||| |||||||||||||||||||||||||| |    
T  35584706 atctaagtgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattgt 35584607  T
Q  119 tcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    ||||||||| ||||| ||||||||||||||||||||||| | ||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  35584606 tcaatcaaatatttgggcgtcaacgttgcagatccggagccaatggatattccggtcactttaatttcatcatatatttttgtaggcatta 35584516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 7 - 203
Target Start/End: Original strand, 9919370 - 9919566
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||| |||| | ||||  | ||||||| |||| |||| ||||||    
T  9919370 tgtgatttcaccatctaagtgtggtggtttgttgttcgtcgtcttgtacggcgttgtttgctttcccgtcttcttgcggtgttcattttattcctattga 9919469  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtag 203  Q
    |||||||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  9919470 aagatcgattattcaatcaaagatttgaacgtcaatgttgcaaatccggaggccatgaatattccggtgactttaatttgatcatatatttttgtag 9919566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 11 - 209
Target Start/End: Complemental strand, 19715990 - 19715793
Alignment:
Q  11 atttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaaga 110  Q
    |||||||||||||||||||||| || |||||||||||| |||||| ||||||||||||||| | |||| || ||||||| ||||||||||||||||||||    
T  19715990 atttcatcatctaagtgtggtgatt-gttgttcgtcgtcttgtgcagcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaaga 19715892  T
Q  111 tcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    |||||| || ||||||||||||| ||||||||||||||||||  ||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  19715891 tcgattgttaaatcaaagatttgggcgtcaacgttgcagatctagaggcaatggatattccggtcactttaatttcatcatatatttttgtaggcatta 19715793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 7 - 209
Target Start/End: Original strand, 14545500 - 14545700
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||||| | | ||||  | ||||||| || ||||| || ||||    
T  14545500 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcgacgctgtttgattcc-cgtcttcttgcggtgttcatctgatttattttga 14545598  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    | ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||||||||    
T  14545599 a-gatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggaggccatgagtattccgatcattttaattttatcatatatttttgtaggca 14545697  T
Q  207 tta 209  Q
    |||    
T  14545698 tta 14545700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 7 - 209
Target Start/End: Complemental strand, 25406384 - 25406182
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    ||||||||| |||||||||||||||||||| ||||||||||| ||||| ||||||||||| |||| | ||||  | ||||||| |||| |||| ||||||    
T  25406384 tgtgatttcgtcatctaagtgtggtggtttattgttcgtcgtcttgtgtggcgttgtttgctttcccgtcttcttgcggtgttcattttattcctattga 25406285  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    ||||||||||||||||||||||||||   |||||||||||||||||| |||| |||| |||||||||| |||||||||||||||||||||||||||||||    
T  25406284 aagatcgattattcaatcaaagatttcgacgtcaacgttgcagatccagaggtcatggatattccggtgactttaattttatcatatatttttgtaggca 25406185  T
Q  207 tta 209  Q
    |||    
T  25406184 tta 25406182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 7 - 209
Target Start/End: Complemental strand, 30818446 - 30818249
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||     ||||||||| || | || | || ||||||| ||||||||| ||| ||    
T  30818446 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtg-----ttgtttgatctcccgtcattgtgcggtgttcatttgattcttatcga 30818352  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    ||||||||||||||||||||||||||  |||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30818351 aagatcgattattcaatcaaagatttaggcgttaacgttgtagatccggtggccatgaatattccggtcactttaattttatcatatatttttgtaggca 30818252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 11 - 195
Target Start/End: Original strand, 31836792 - 31836975
Alignment:
Q  11 atttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaaga 110  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||| | |||| || ||||||| |||||||||||||||||| |    
T  31836792 atttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaaaa 31836891  T
Q  111 tcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatat 195  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||| || ||| ||||||||||||||||||||| |||||||||    
T  31836892 tcgattgttcaatcaaagatttgagcgtcaacgttgcagaaccgga-gcaatggatattccggtcactttaatttcatcatatat 31836975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 7 - 209
Target Start/End: Original strand, 3871389 - 3871591
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatatt-g 105  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| | ||||  | |||||||  ||||||| ||||| |    
T  3871389 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcagcgttgtttgatttcccgtcttcttgcggtgttc-tttgatttatatttg 3871487  T
Q  106 aaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggc 205  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||| |||| |||| ||||| |||||||| |||||||| |||||||||||||||||    
T  3871488 aaagatcgattattcaatcaaagatttgggtgtcaacgttgcagatccagaggtcatgtatatttcggtcactataattttaacatatatttttgtaggc 3871587  T
Q  206 atta 209  Q
    ||||    
T  3871588 atta 3871591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 11 - 209
Target Start/End: Original strand, 30879061 - 30879258
Alignment:
Q  11 atttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaaga 110  Q
    |||||||||| ||||||||||| ||||||||||||||| ||||||| |||||||||||||  | |||| || ||||||| ||||||||||||||||||||    
T  30879061 atttcatcatttaagtgtggtgatttgttgttcgtcgtcttgtgcg-cgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaaga 30879159  T
Q  111 tcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    |||||| |||||||||| ||||| ||||||||||||||||| ||||||| ||| |||||||| |||||||||||| ||||||||||||||||| |||||    
T  30879160 tcgattgttcaatcaaatatttgggcgtcaacgttgcagattcggaggcaatggatattccgatcactttaatttcatcatatatttttgtagacatta 30879258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 11 - 209
Target Start/End: Original strand, 50148359 - 50148553
Alignment:
Q  11 atttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaaga 110  Q
    |||||||| ||||||||||||| ||||||||    ||| ||||||| | |||||||||||| | |||| || ||||||| ||||||||||||||||||||    
T  50148359 atttcatcttctaagtgtggtgatttgttgt----cgtcttgtgcgacattgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaaga 50148454  T
Q  111 tcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    |||||| ||||||||||||| || |||||||||||||||||||||| || ||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  50148455 tcgattgttcaatcaaagatgtgggcgtcaacgttgcagatccggaagcaatggatattccggtcactttaatttcatcatatatttttgtaggcatta 50148553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 8 - 198
Target Start/End: Original strand, 39987371 - 39987560
Alignment:
Q  8 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaa 107  Q
    ||||||||| ||||  ||||||||||| | ||||||||||| |||||||||||||||||||||  | | ||  | ||||||| |||||||||||||||||    
T  39987371 gtgatttcaccatccgagtgtggtggtgtattgttcgtcgtcttgtgcggcgttgtttgattttccgtattgctgcggtgttcatttgattcatattgaa 39987470  T
Q  108 agatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttt 198  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||    
T  39987471 agatcgattattcaatcaaagaattgggcgtcaacgttgcagatccggagg-catgggtattccggtcactttaattttatcatatatttt 39987560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 11 - 209
Target Start/End: Original strand, 20266287 - 20266485
Alignment:
Q  11 atttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaaga 110  Q
    |||||||||||||||||||||| ||||||||||||||| ||||| ||  |||||||||||| | |||| || |||||   ||||||||||||||||||||    
T  20266287 atttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgtggaattgtttgatttcccgtcttcgtgcggtggacatttgattcatattgaaaga 20266386  T
Q  111 tcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    |||||| |||||||||||||||| || |||||||||||||| ||||||| ||| || |||| ||||||||||||| |||||||| |||||||| |||||    
T  20266387 tcgattgttcaatcaaagatttgggcatcaacgttgcagattcggaggcaatggatgttccagtcactttaatttcatcatatacttttgtagacatta 20266485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 8 - 209
Target Start/End: Complemental strand, 38520633 - 38520433
Alignment:
Q  8 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgta---ttgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatatt 104  Q
    |||||||||||||||||| ||||||||||||||||||||||    ||||| |||||||||||||||| | | ||  ||||||||| || |||||||||||    
T  38520633 gtgatttcatcatctaagagtggtggtttgttgttcgtcgtcgtcttgtgtggcgttgtttgatttcccgtattcttacggtgttcatctgattcatatt 38520534  T
Q  105 gaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtagg 204  Q
    ||||||||||||||| |||||||   ||| ||||||||||||||||| |||||| |||| ||||||| ||||||||||||||||| ||||||||||||||    
T  38520533 gaaagatcgattattaaatcaaa---ttgtgcgtcaacgttgcagattcggagg-catggatattccagtcactttaattttatcgtatatttttgtagg 38520438  T
Q  205 catta 209  Q
    |||||    
T  38520437 catta 38520433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 8 - 209
Target Start/End: Original strand, 27872720 - 27872920
Alignment:
Q  8 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaa 107  Q
    |||||| |||||||||||||||||||||||||||||||||| |||| || ||||||||||||| |  ||||  | ||||||| |||| ||||| ||||||    
T  27872720 gtgattgcatcatctaagtgtggtggtttgttgttcgtcgtcttgttcgacgttgtttgattttttgtcttcttgcggtgttcatttaattcaaattgaa 27872819  T
Q  108 agatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcat 207  Q
     ||||||||||||||| |||||||||||||||||||||| |||| |||| | | ||||||||||  ||| ||||||||||||||||||||||||| ||||    
T  27872820 ggatcgattattcaattaaagatttgagcgtcaacgttgtagat-cggaaggcgtgaatattccaatcattttaattttatcatatatttttgtaagcat 27872918  T
Q  208 ta 209  Q
    ||    
T  27872919 ta 27872920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 12 - 209
Target Start/End: Complemental strand, 45805911 - 45805726
Alignment:
Q  12 tttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    |||||||||||||||||||||||||||||||||||||            |||||| |||| | ||||  | ||||||| |||| ||||  ||||||||||    
T  45805911 tttcatcatctaagtgtggtggtttgttgttcgtcgt------------tgtttgctttcccgtcttcttgcggtgttcatttcattccgattgaaagat 45805824  T
Q  112 cgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||    
T  45805823 cgattattcaatcaaagatttgaacgtcaacgttgcagatccggaggccatggatattccggtgactttaattttatcatatatttttgtaggtatta 45805726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 8 - 209
Target Start/End: Complemental strand, 48365864 - 48365664
Alignment:
Q  8 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagta-cggtgtttatttgattcatattga 106  Q
    |||||||| |||||| ||||||||||| ||||||||||| | ||||||  ||||||||||||| |  |||| ||| ||||||| ||||||||||||||||    
T  48365864 gtgatttcgtcatctgagtgtggtggtgtgttgttcgtcatcttgtgcaacgttgtttgattttttgtctt-gtagcggtgttcatttgattcatattga 48365766  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    | |||||||||||||||||||||||||| |||||||||||||||||||| |  ||| | ||||||| | ||||||||||||||||||||||||||||| |    
T  48365765 aggatcgattattcaatcaaagatttgaacgtcaacgttgcagatccgg-gagcataagtattccgattactttaattttatcatatatttttgtaggaa 48365667  T
Q  207 tta 209  Q
    |||    
T  48365666 tta 48365664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 8 - 209
Target Start/End: Complemental strand, 18569409 - 18569209
Alignment:
Q  8 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaa 107  Q
    |||||||| |||| | ||||||||||| ||||||||||| | |||| ||| |||||| |||||| | ||||  | ||||||| |||| ||||||||||||    
T  18569409 gtgatttcgtcatttgagtgtggtggtgtgttgttcgtcatcttgtccggtgttgttagatttcccgtcttgttgcggtgttcatttaattcatattgaa 18569310  T
Q  108 agatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcat 207  Q
    ||||||||||||||||  |||||||| | ||||||||||||||||| |||| ||||  ||||||||||||||||||||||||||||| ||||||||||||    
T  18569309 agatcgattattcaattgaagatttgggtgtcaacgttgcagatccagagg-catgggtattccggtcactttaattttatcatatacttttgtaggcat 18569211  T
Q  208 ta 209  Q
    ||    
T  18569210 ta 18569209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 56 - 209
Target Start/End: Original strand, 40646700 - 40646857
Alignment:
Q  56 ggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgat----tattcaatcaaagatttgagcgtcaacgttgcagat 151  Q
    |||||||||||||||| | |||| || |||||||||||||||||||||||||||||||||    | |||||||||||||||| |||||||||||||||||    
T  40646700 ggcgttgtttgatttcccgtcttcgtgcggtgtttatttgattcatattgaaagatcgatcgattgttcaatcaaagatttgggcgtcaacgttgcagat 40646799  T
Q  152 ccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    |||||||| ||| |||||| ||||||| |||||| |||||||||||||||||||||||    
T  40646800 ccggaggcaatggatattctggtcactataatttcatcatatatttttgtaggcatta 40646857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 16 - 209
Target Start/End: Complemental strand, 33817271 - 33817066
Alignment:
Q  16 atcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgat 115  Q
    ||||| ||||||||||||||| ||||| ||||| || ||| ||||||||||||||||| ||||  | ||||||| |||||||||||||||||||||||||    
T  33817271 atcatttaagtgtggtggtttattgtttgtcgtcttatgctgcgttgtttgatttctcgtcttttt-cggtgttcatttgattcatattgaaagatcgat 33817173  T
Q  116 tattcaatcaaa-------------gatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgta 202  Q
    ||||||||||||             ||||||    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  33817172 tattcaatcaaattattcaatcaaagatttggatatcaacgttgcagatccggaggccatgaatattccggtcactttaattttctcatatatttttgta 33817073  T
Q  203 ggcatta 209  Q
    |||||||    
T  33817072 ggcatta 33817066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 17 - 209
Target Start/End: Complemental strand, 33876740 - 33876536
Alignment:
Q  17 tcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgatt 116  Q
    |||| ||||||||||||||| ||||| ||||| || ||| ||||||||||||||||| ||||  | ||||||| ||||||||||||||||||||||||||    
T  33876740 tcatttaagtgtggtggtttattgtttgtcgtcttatgctgcgttgtttgatttctcgtcttttt-cggtgttcatttgattcatattgaaagatcgatt 33876642  T
Q  117 attcaatcaaa-------------gatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtag 203  Q
    |||||||||||             ||||||    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  33876641 attcaatcaaattattcaatcaaagatttggatatcaacgttgcagatccggaggccatgaatattccggtcactttaattttctcatatatttttgtag 33876542  T
Q  204 gcatta 209  Q
    ||||||    
T  33876541 gcatta 33876536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 8 - 209
Target Start/End: Complemental strand, 39927653 - 39927453
Alignment:
Q  8 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaa 107  Q
    |||||||| |||||  ||||||||||| ||||||||||||| ||||| |||||||||||||||| | ||||  | ||||||| ||||| |||||||||||    
T  39927653 gtgatttcgtcatccgagtgtggtggtgtgttgttcgtcgtcttgtgtggcgttgtttgatttcccgtcttgttgcggtgttcatttgtttcatattgaa 39927554  T
Q  108 agatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcat 207  Q
    |||||| |||| |||| ||| |||||   ||||||||||||||||| || | ||||| ||||||  ||||||||||||||||||||||||||||||||||    
T  39927553 agatcggttatccaataaaaaatttggatgtcaacgttgcagatcc-gaagacatgagtattccaatcactttaattttatcatatatttttgtaggcat 39927455  T
Q  208 ta 209  Q
    ||    
T  39927454 ta 39927453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 19 - 209
Target Start/End: Complemental strand, 7312188 - 7312004
Alignment:
Q  19 atctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattat 118  Q
    |||||||||||||||| |||||||| | || |||||     |||||||||||  | ||||  | ||||||| ||||||||||||||||||||||||| ||    
T  7312188 atctaagtgtggtggtgtgttgttcattgtcttgtg-----ttgtttgattttccgtcttgttgcggtgttcatttgattcatattgaaagatcgataat 7312094  T
Q  119 tcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    |||| ||||||||||  ||||||| ||||||||||||  | ||||| |||| ||||||||||| |||||||||||||||||||||||||||    
T  7312093 tcaaacaaagatttggacgtcaacattgcagatccggttg-catgagtatttcggtcactttagttttatcatatatttttgtaggcatta 7312004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 24 - 209
Target Start/End: Complemental strand, 41081787 - 41081602
Alignment:
Q  24 agtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaa-gatcgattattcaa 122  Q
    ||||||||||| |||||||| |||  |||||||||||||||| |||||    |||  | | ||||| || ||||||||||||||| ||||||||||||||    
T  41081787 agtgtggtggtgtgttgttcatcggcttgtgcggcgttgtttaatttcatgccttgttgcagtgttcatatgattcatattgaaaagatcgattattcaa 41081688  T
Q  123 tcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    ||||| || ||||| |||| |||||||||||||||| ||||  ||||| ||||| ||||||||||||||||||||||||||||||||    
T  41081687 tcaaaaatctgagcatcaatgttgcagatccggagg-catgtgtattctggtcattttaattttatcatatatttttgtaggcatta 41081602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 117 - 209
Target Start/End: Complemental strand, 32677120 - 32677028
Alignment:
Q  117 attcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    ||||||||||||||||| ||||||||||||||||| ||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  32677120 attcaatcaaagatttgggcgtcaacgttgcagattcggaggcgatggatattccagtcactttaattttatcatatatttttgtaggcatta 32677028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 117 - 209
Target Start/End: Original strand, 19723404 - 19723496
Alignment:
Q  117 attcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    ||||||||||||||||| |||||||||| |||||||||||||| ||| ||||| |||| ||||||||||||||||||||||||||||||||||    
T  19723404 attcaatcaaagatttgggcgtcaacgtagcagatccggaggcgatggatatttcggttactttaattttatcatatatttttgtaggcatta 19723496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 7 - 159
Target Start/End: Original strand, 44637402 - 44637554
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    ||||||||| |||||||| ||||||| | |||||||||| || ||||||| ||||||||| |||| | ||||  ||||||||| ||||||||||||||||    
T  44637402 tgtgatttcgtcatctaaatgtggtgatgtgttgttcgtagtcttgtgcgacgttgtttggtttcccgtcttgttacggtgttcatttgattcatattga 44637501  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggc 159  Q
    |||||| | ||||  |||||||||||  |||||||| ||| ||||| ||||||    
T  44637502 aagatcaaatattacatcaaagatttaggcgtcaacattgaagatctggaggc 44637554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 19723314 - 19723377
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgattt 70  Q
    |||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  19723314 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttctgcggcgttgtttgattt 19723377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 165 - 209
Target Start/End: Complemental strand, 11709649 - 11709605
Alignment:
Q  165 atattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  11709649 atattccggtcactttaattttatcatatatttttgtaggcatta 11709605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 34528719 - 34528795
Alignment:
Q  36 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatc 112  Q
    ||||||||||||| ||| |||| ||||||||||||| ||||||  | |||||||| |||| || |||||||||||||    
T  34528719 tgttgttcgtcgtcttgcgcggtgttgtttgatttcgcatcttgtttcggtgtttctttggtttatattgaaagatc 34528795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 63 - 111
Target Start/End: Original strand, 42491049 - 42491097
Alignment:
Q  63 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||||||| ||||||| |||||||||||||||||| ||||||||||    
T  42491049 tttgatttctcgtcttagtgcggtgtttatttgattcagattgaaagat 42491097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 44543262 - 44543337
Alignment:
Q  36 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatc 112  Q
    |||||||||||||||| ||||||||||||||||||  ||||||| | ||||| ||  ||| ||||||||||||||||    
T  44543262 tgttgttcgtcgtattatgcggcgttgtttgatttggcatcttattgcggtg-ttcgttggttcatattgaaagatc 44543337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 47132892 - 47132968
Alignment:
Q  36 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatc 112  Q
    ||||||||||||| |||||||||||||||| ||||| | ||||  | |||||||  |||| ||||||||||||||||    
T  47132892 tgttgttcgtcgttttgtgcggcgttgtttaatttcgcgtcttgttgcggtgttcgtttgcttcatattgaaagatc 47132968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 208
Target Start/End: Complemental strand, 21947626 - 21947537
Alignment:
Q  117 attcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatt 208  Q
    |||||| ||| ||||||  ||||||||||||||||||||| | |||||||||| |||| |||| | ||||||||||| | ||||||||||||    
T  21947626 attcaaccaatgatttggacgtcaacgttgcagatccggaag-catgaatatttcggtgacttaagttttatcatat-tatttgtaggcatt 21947537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 204
Target Start/End: Complemental strand, 27915046 - 27915007
Alignment:
Q  165 atattccggtcactttaattttatcatatatttttgtagg 204  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  27915046 atattccggtcactttaatttcatcatatatttttgtagg 27915007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 78
Target Start/End: Original strand, 16161823 - 16161865
Alignment:
Q  36 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatctt 78  Q
    ||||||||||||| |||||||||||||||||||||| ||||||    
T  16161823 tgttgttcgtcgtcttgtgcggcgttgtttgatttcacatctt 16161865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 112
Target Start/End: Original strand, 29184222 - 29184276
Alignment:
Q  58 cgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatc 112  Q
    |||||||||||||| | ||||| || ||||||| |||||||||||||||||||||    
T  29184222 cgttgtttgatttcacgtcttattatggtgtttctttgattcatattgaaagatc 29184276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 78
Target Start/End: Complemental strand, 34413197 - 34413155
Alignment:
Q  36 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatctt 78  Q
    ||||||||||||| |||||||||||||||||||||| ||||||    
T  34413197 tgttgttcgtcgtcttgtgcggcgttgtttgatttcgcatctt 34413155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 153
Target Start/End: Original strand, 4397036 - 4397097
Alignment:
Q  92 tttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatcc 153  Q
    |||||||| |||||||| |||||| ||||||| || |||||| |||| ||||||||||||||    
T  4397036 tttgattcttattgaaaaatcgatcattcaatgaatgatttgggcgtgaacgttgcagatcc 4397097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 108
Target Start/End: Complemental strand, 4870994 - 4870953
Alignment:
Q  67 atttctcatcttagtacggtgtttatttgattcatattgaaa 108  Q
    ||||||||||||||| |||||||||||||||||| |||||||    
T  4870994 atttctcatcttagtgcggtgtttatttgattcagattgaaa 4870953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 209
Target Start/End: Complemental strand, 31130532 - 31130491
Alignment:
Q  168 ttccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    ||||||||||||||||||||| || |||||||||||||||||    
T  31130532 ttccggtcactttaattttattatgtatttttgtaggcatta 31130491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 31317795 - 31317859
Alignment:
Q  92 tttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccgga 156  Q
    |||||||| |||||||||||| | | ||||||||| |||||| ||||||||||| |||| |||||    
T  31317795 tttgattcctattgaaagatcaacttttcaatcaatgatttgggcgtcaacgttacagacccgga 31317859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 111
Target Start/End: Original strand, 42276511 - 42276559
Alignment:
Q  63 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||||| ||||||||| ||||||||||||||||||  |||||||||    
T  42276511 tttgatttcccatcttagtgcggtgtttatttgattcaggttgaaagat 42276559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 49626903 - 49626978
Alignment:
Q  36 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatc 112  Q
    ||||||||||||| |||||||||||||||||||||  ||||||  | ||||| ||  ||| ||||||||||||||||    
T  49626903 tgttgttcgtcgtcttgtgcggcgttgtttgatttgacatcttgttgcggtg-ttcgttggttcatattgaaagatc 49626978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 197
Target Start/End: Complemental strand, 51916673 - 51916595
Alignment:
Q  117 attcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatattt 197  Q
    |||||||||| |||||||||||||||||||||||| |||| | ||||| |||| | || ||||  ||||||||||||||||    
T  51916673 attcaatcaatgatttgagcgtcaacgttgcagatacggaag-catgagtatttc-gtgacttagattttatcatatattt 51916595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 208
Target Start/End: Original strand, 4413210 - 4413287
Alignment:
Q  129 atttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatt 208  Q
    ||||| |||||||||||||||||||||| | |||||||||| |||| ||||   ||||||||||| | ||||||||||||    
T  4413210 atttgggcgtcaacgttgcagatccggaag-catgaatatttcggtgacttaggttttatcatat-tatttgtaggcatt 4413287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 208
Target Start/End: Original strand, 44915723 - 44915812
Alignment:
Q  117 attcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatt 208  Q
    |||||||||| |||||| ||||||| |||||||||||||| | ||||| |||| ||||  |||  |||||||||||| | ||||||||||||    
T  44915723 attcaatcaatgatttgggcgtcaatgttgcagatccggaag-catgagtatttcggtttcttagattttatcatat-tatttgtaggcatt 44915812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 48750170 - 48750250
Alignment:
Q  36 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatct----tagtacggtgtttatttgattcatattgaaagatc 112  Q
    ||||||||||||| ||||||| |||||||||||||| |||||    | || |||||||  |||||||| ||||||||||||    
T  48750170 tgttgttcgtcgtcttgtgcgacgttgtttgatttcgcatcttttgttgtgcggtgttcgtttgattcgtattgaaagatc 48750250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 5983799 - 5983853
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgtt 61  Q
    ||||||||| || |||||||| || | ||||||||||||||| ||||||||||||    
T  5983799 tgtgatttcgtcgtctaagtgcggcgttttgttgttcgtcgtcttgtgcggcgtt 5983853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 70
Target Start/End: Original strand, 12635159 - 12635193
Alignment:
Q  36 tgttgttcgtcgtattgtgcggcgttgtttgattt 70  Q
    ||||||||||||| |||||||||||||||||||||    
T  12635159 tgttgttcgtcgtcttgtgcggcgttgtttgattt 12635193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 111
Target Start/End: Complemental strand, 45193595 - 45193545
Alignment:
Q  61 tgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||||||| | |||||||||||||||||||||| |||  |||||||||    
T  45193595 tgtttgatttcccgtcttagtacggtgtttatttgaatcaggttgaaagat 45193545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 111
Target Start/End: Original strand, 20411715 - 20411776
Alignment:
Q  50 ttgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    |||||||| ||  ||||||||| | ||||||| ||||||||||||||||||  |||||||||    
T  20411715 ttgtgcggtgtgttttgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagat 20411776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 111
Target Start/End: Original strand, 8937786 - 8937834
Alignment:
Q  63 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||||||  ||||| | |||||||||||||||||| ||||||||||    
T  8937786 tttgatttcttgtcttaatgcggtgtttatttgattcaaattgaaagat 8937834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 111
Target Start/End: Complemental strand, 9298377 - 9298333
Alignment:
Q  67 atttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||| ||||||||| ||||||||||||||||||  |||||||||    
T  9298377 atttcccatcttagtgcggtgtttatttgattcaggttgaaagat 9298333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 111
Target Start/End: Complemental strand, 15391217 - 15391169
Alignment:
Q  63 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||||| | ||||||| ||||||||||||||||||  |||||||||    
T  15391217 tttgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagat 15391169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 111
Target Start/End: Complemental strand, 15791236 - 15791192
Alignment:
Q  67 atttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    |||||||| |||||| ||||||||||||||||||  |||||||||    
T  15791236 atttctcaccttagtgcggtgtttatttgattcaggttgaaagat 15791192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 156
Target Start/End: Original strand, 16262944 - 16262984
Alignment:
Q  116 tattcaatcaaagatttgagcgtcaacgttgcagatccgga 156  Q
    ||||||||||| |||||| || |||||||||||||||||||    
T  16262944 tattcaatcaatgatttgtgcatcaacgttgcagatccgga 16262984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 111
Target Start/End: Original strand, 32878876 - 32878912
Alignment:
Q  75 tcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||||||||||||||||||||||  |||||||||    
T  32878876 tcttagtacggtgtttatttgattcaggttgaaagat 32878912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 153
Target Start/End: Complemental strand, 36775718 - 36775682
Alignment:
Q  117 attcaatcaaagatttgagcgtcaacgttgcagatcc 153  Q
    |||||||||| |||||| |||||||||||||||||||    
T  36775718 attcaatcaatgatttgggcgtcaacgttgcagatcc 36775682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 111
Target Start/End: Original strand, 44517303 - 44517351
Alignment:
Q  63 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||||| | ||||||| ||||||||||||||||||  |||||||||    
T  44517303 tttgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagat 44517351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 167; Significance: 1e-89; HSPs: 87)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 7 - 209
Target Start/End: Original strand, 25273872 - 25274074
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | |||| || ||||||| ||||||||||||||||    
T  25273872 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattga 25273971  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  25273972 aagatcgattattcaatcaaaaatttgggcgtcaacgttgcagatccggaggccatggatattccggtcactttaattttatcatatatttttgtaggca 25274071  T
Q  207 tta 209  Q
    |||    
T  25274072 tta 25274074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 7 - 209
Target Start/End: Original strand, 4643847 - 4644049
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | |||| || ||||||| ||||||||||||||||    
T  4643847 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtctttgtgcggtgttcatttgattcatattga 4643946  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||    
T  4643947 aagatcgattattcaatcaaagatttgggcgtcaaagttgcagatccggaggtcatgaatattccggtcaatttaattttatcatatattattgtaggca 4644046  T
Q  207 tta 209  Q
    |||    
T  4644047 tta 4644049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 7 - 209
Target Start/End: Complemental strand, 43154114 - 43153912
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||| ||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||| | |||| || ||||||| ||||||||||||||||    
T  43154114 tgtgattttatcatttaagtgtggtggtttgttgttcgtcgtcttgtgtggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattga 43154015  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  43154014 aagatcgattattcaatcaaagatttgagcgtcaacgttacagatccggaggccatggatattccggtcactttaattttatcatatatttttgtaggca 43153915  T
Q  207 tta 209  Q
    |||    
T  43153914 tta 43153912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 7 - 209
Target Start/End: Complemental strand, 9528977 - 9528775
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| | |||| || || |||| ||||||||||||||||    
T  9528977 tgtgatttcatcatctaagtgtgatggtttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcgatgttcatttgattcatattga 9528878  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    |||||||||||||||||||||||||||  ||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  9528877 aagatcgattattcaatcaaagatttggccgtcaacgttgcagatctggaggtcatggatattccggtcactttaattttatcatatatttttgtaggca 9528778  T
Q  207 tta 209  Q
    |||    
T  9528777 tta 9528775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 9 - 209
Target Start/End: Complemental strand, 10389852 - 10389652
Alignment:
Q  9 tgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaa 108  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  | ||||  | ||||||| ||||||||||||||||||    
T  10389852 tgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcttgcggtgttcatttgattcatattgaaa 10389753  T
Q  109 gatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatt 208  Q
     ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||    
T  10389752 tatcgattattcaatcaacgatttgagcgtcaacgttgcagatccggaggccatggatattccgatcactttaattttatcatatatttttgtagacatt 10389653  T
Q  209 a 209  Q
    |    
T  10389652 a 10389652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 27 - 209
Target Start/End: Original strand, 49410232 - 49410414
Alignment:
Q  27 gtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaa 126  Q
    |||||||||||||||||||||| |||||| ||||||||||||||| | |||| || ||||||| ||||||||||||||||||||||||||||||||||||    
T  49410232 gtggtggtttgttgttcgtcgtcttgtgcagcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattattcaatcaa 49410331  T
Q  127 agatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    ||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  49410332 agatttgggcgtcaacgttgcagatccggaggccgtgaatattcctgtcactttaattttatcatatatttttgtaggcatta 49410414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 11 - 209
Target Start/End: Complemental strand, 53616746 - 53616548
Alignment:
Q  11 atttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaaga 110  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| | |||| || ||||||| ||||||||||||||||||||    
T  53616746 atttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaaga 53616647  T
Q  111 tcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    || ||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||| || ||||||||||||||||||||    
T  53616646 tcaattgttcaatcaaagatttgggcgtcaacgttgcagatccggaggcaatggatattccggtcactttaatttcattatatatttttgtaggcatta 53616548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 7 - 208
Target Start/End: Original strand, 44947401 - 44947602
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    ||||||||||| |||||||||||||||||||||| | || || |||||||||||||||||||||| | |||| ||  |||||| |||||||| |||||||    
T  44947401 tgtgatttcattatctaagtgtggtggtttgttggttgttgtcttgtgcggcgttgtttgatttcccgtcttcgtgtggtgttcatttgattaatattga 44947500  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  44947501 aagatcgattattcaatcaaagatttgggcgtcaacgttgcagatccgaaggccatggatattccggtcactttaattttatcatatatttttgtaggca 44947600  T
Q  207 tt 208  Q
    ||    
T  44947601 tt 44947602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 11 - 209
Target Start/End: Complemental strand, 50766605 - 50766410
Alignment:
Q  11 atttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaaga 110  Q
    |||||||||||||||||||||| |||||||||||||   |||||||||||||||||||||| | |||| || ||||||| ||||||||||||||||||||    
T  50766605 atttcatcatctaagtgtggtgatttgttgttcgtc---ttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaaga 50766509  T
Q  111 tcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    || ||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  50766508 tctattgttcaatcaaagatttgagcgtcaacgttgcagatccggaggcaatggatattccggtcactttaatttcatcatatatttttgtaggcatta 50766410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 7 - 209
Target Start/End: Original strand, 868151 - 868354
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||  | ||||||| ||||||||||||||||    
T  868151 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcttgcggtgttcatttgattcatattga 868250  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatattttt-gtaggc 205  Q
    |||||| ||||||||||||||||||||   || ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  868251 aagatcaattattcaatcaaagatttggatgtgaacgttgtagatccggaggccatggatattccggtcactttaattttatcatatatttttggtaggc 868350  T
Q  206 atta 209  Q
    ||||    
T  868351 atta 868354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 11 - 209
Target Start/End: Original strand, 29965628 - 29965826
Alignment:
Q  11 atttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaaga 110  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| | |||| || ||||||| ||||||||||||||||||||    
T  29965628 atttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtctttgtgcggtgttcatttgattcatattgaaaga 29965727  T
Q  111 tcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    | |||| |||||||||||||||| || |||||||||||||||||||||  ||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  29965728 ttgattgttcaatcaaagatttgggcatcaacgttgcagatccggaggtaatggatattccggtcactttaatttcatcatatatttttgtaggcatta 29965826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 7 - 209
Target Start/End: Complemental strand, 38706810 - 38706608
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||| | |||| || ||||||| |||||||| |||||||    
T  38706810 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcagcgttgtttcatttcccgtcttcgtgcggtgttaatttgatttatattga 38706711  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    |||||||||||||||||| |||||||| || ||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||    
T  38706710 aagatcgattattcaatcgaagatttgggcatcaacgttgcaaatccggaggccatggatatttcggtcactttaattttatcatatatttttgtagaca 38706611  T
Q  207 tta 209  Q
    |||    
T  38706610 tta 38706608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 9 - 209
Target Start/End: Complemental strand, 34024535 - 34024336
Alignment:
Q  9 tgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaa 108  Q
    |||||||||||||||||||||||||||||||||||||||| ||||  | |||||||||||||  ||||||  | |||||||  |||||||||||||||||    
T  34024535 tgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtatgacgttgtttgattttccatcttcttgcggtgttc-tttgattcatattgaaa 34024437  T
Q  109 gatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatt 208  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||    
T  34024436 gatcgattattcaatcaacgatttgagcgtcaacgttgcagatccggaggccatggatattccggtcattttaattttatcatatatttttgtaagcatt 34024337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 13 - 209
Target Start/End: Original strand, 47417657 - 47417853
Alignment:
Q  13 ttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatc 112  Q
    |||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||| | |||| || ||||||| ||||||||||||||||||||||    
T  47417657 ttcatcatctaaatgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 47417756  T
Q  113 gattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||| ||| |||||||  |||||||||||| |||||||||||||||||||||||    
T  47417757 gattgttcaatcaaagatttgggcgtcaacgttgcagatccggaggcaatggatattccattcactttaatttcatcatatatttttgtaggcatta 47417853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 9 - 209
Target Start/End: Original strand, 51317976 - 51318176
Alignment:
Q  9 tgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaa 108  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||| | ||||  | ||||||| ||||||||||||||||||    
T  51317976 tgatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggcattgtttgatttcccgtcttcttgcggtgttaatttgattcatattgaaa 51318075  T
Q  109 gatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatt 208  Q
    ||| |||| |||||||||  ||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  51318076 gattgattgttcaatcaacaatttgggcgtcaacgttgcagatccggaggtcatggatattccggtcactttaattttatcatatatttttgtaggcatt 51318175  T
Q  209 a 209  Q
    |    
T  51318176 a 51318176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 7 - 209
Target Start/End: Original strand, 6972799 - 6973001
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||   ||||  | | ||||| |||| |||| ||||||    
T  6972799 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgctttcctgtcttcttgcagtgttcattttattcctattga 6972898  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| |    
T  6972899 aagatcgattattcaatcaaaggtttgggcgtcaacgttgcagatccggaggccatggatattccggtgactttaattttatcatatatttttgtaggta 6972998  T
Q  207 tta 209  Q
    |||    
T  6972999 tta 6973001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 11 - 209
Target Start/End: Original strand, 9283904 - 9284102
Alignment:
Q  11 atttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaaga 110  Q
    |||||||||||||||||||||| ||||||||| ||||| ||||| |||||||||||||||| | |||| || ||||||| ||||||||||||||||||||    
T  9283904 atttcatcatctaagtgtggtgatttgttgtttgtcgtcttgtgtggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaaga 9284003  T
Q  111 tcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    |||||| |||||||||||||||| |||||||||||||||||| |||||| ||||||||| | ||||||||||||| |||||||||||||||||||||||    
T  9284004 tcgattgttcaatcaaagatttgggcgtcaacgttgcagatctggaggcaatgaatatttcagtcactttaatttcatcatatatttttgtaggcatta 9284102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 7 - 201
Target Start/End: Complemental strand, 31381772 - 31381578
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||  | |||| || ||||||| |||||||||||||| |    
T  31381772 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcagcgttgtttgattttccgtcttcgtgcggtgttaatttgattcatattaa 31381673  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgt 201  Q
    ||||||||||||||||||||||||||| |||||||| ||||| || |||||| |||||||| |||||||||||||||||||||||||||||||||    
T  31381672 aagatcgattattcaatcaaagatttgggcgtcaacattgcaaattcggaggtcatgaatactccggtcactttaattttatcatatatttttgt 31381578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 11 - 209
Target Start/End: Original strand, 43444386 - 43444583
Alignment:
Q  11 atttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaaga 110  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||  | |||  || ||||||| ||||||||||||||||||||    
T  43444386 atttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtctacgtgcggtgttcatttgattcatattgaaaga 43444485  T
Q  111 tcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    |||||| ||||||||||||| || ||||||||||||||||||| ||| | ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  43444486 tcgattgttcaatcaaagatatgggcgtcaacgttgcagatcc-gagacaatgaatattccggtcactttaatttcatcatatatttttgtaggcatta 43444583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 7 - 208
Target Start/End: Complemental strand, 37188694 - 37188494
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||||||||| |  |||  | ||||||| || |||||||| ||||    
T  37188694 tgtgatttcatcatttaagtgtggtggtttgttgttcgtcgttttgtgcggcgctgtttgatttcccgcctttttgcggtgttcatctgattcattttga 37188595  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||||||||||    
T  37188594 a-gatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggaggccatggatattcctgtcactttaattttatcatataattttgtaggca 37188496  T
Q  207 tt 208  Q
    ||    
T  37188495 tt 37188494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 7 - 209
Target Start/End: Original strand, 1531897 - 1532099
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||||||||||||||||||||||||  ||||| ||||| ||||||||||||||||   |||| || ||||||||||||||||||| ||||    
T  1531897 tgtgatttcatcatctaagtgtggtggtttgttgtctgtcgtcttgtgtggcgttgtttgatttcctgtcttcgtgcggtgtttatttgattcatgttga 1531996  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    |||||| |||||||||||||| ||||| |||||||||||||||| ||||||| |||| |||||| || ||||||||||||||||||||||||||||| ||    
T  1531997 aagatcaattattcaatcaaaaatttgggcgtcaacgttgcagaaccggaggtcatggatattctggacactttaattttatcatatatttttgtagaca 1532096  T
Q  207 tta 209  Q
    |||    
T  1532097 tta 1532099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 11 - 209
Target Start/End: Complemental strand, 2115683 - 2115486
Alignment:
Q  11 atttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaaga 110  Q
    |||||||||||||||||||||| ||||||||| ||||| |||||||  |||||||||||||||||||| || || | || |||| |||||||||||||||    
T  2115683 atttcatcatctaagtgtggtgatttgttgtttgtcgtcttgtgcgt-gttgtttgatttctcatcttcgtgcgatattcatttaattcatattgaaaga 2115585  T
Q  111 tcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    |||||| |||||||||| ||||| ||||||||||||||||||||||||| ||| ||||||| ||||||||||||| |||||||||||||||||||||||    
T  2115584 tcgattgttcaatcaaaaatttgggcgtcaacgttgcagatccggaggcaatggatattccagtcactttaatttcatcatatatttttgtaggcatta 2115486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 22 - 209
Target Start/End: Complemental strand, 45228126 - 45227939
Alignment:
Q  22 taagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattca 121  Q
    ||||||||||||||||||||||| ||| ||||||||  |||||| ||||| | |||| ||||| | || |||||||| | ||||||||||||||||||||    
T  45228126 taagtgtggtggtttgttgttcgccgtcttgtgcggtattgtttaatttcccgtcttcgtacgatattcatttgatttacattgaaagatcgattattca 45228027  T
Q  122 atcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    |||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  45228026 atcaaagatttgggcgtcaacgttgcagattcggagaccatgaatattccggtcactttaattttatcatatatttttgtgggcatta 45227939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 8 - 209
Target Start/End: Complemental strand, 10359646 - 10359446
Alignment:
Q  8 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaa 107  Q
    ||||||||||||||||||||||||||||||||||||| ||| || ||||| ||||||||||||| | ||||  |  |||||| |||||||||||||||||    
T  10359646 gtgatttcatcatctaagtgtggtggtttgttgttcgccgtcttttgcggtgttgtttgatttcccgtcttcttgtggtgttcatttgattcatattgaa 10359547  T
Q  108 agatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcat 207  Q
    |||||||||||||||| ||||||||| || |||||||||||||||  |||| |||| ||||||| ||||||||| |||||||||||||||||||||||||    
T  10359546 agatcgattattcaataaaagatttgggcatcaacgttgcagatcttgagg-catggatattccagtcactttatttttatcatatatttttgtaggcat 10359448  T
Q  208 ta 209  Q
    ||    
T  10359447 ta 10359446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 7 - 193
Target Start/End: Complemental strand, 8009461 - 8009275
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||  ||||||||| ||||||||| ||  ||    
T  8009461 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcatacggtgttcatttgattcttacaga 8009362  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatat 193  Q
    ||||| ||||||||||||||| ||||| |||||||||||| | ||||| || ||||| |||||||| ||||||||||||||||||||    
T  8009361 aagattgattattcaatcaaaaatttgggcgtcaacgttgtatatccgaagaccatggatattccgatcactttaattttatcatat 8009275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 11 - 209
Target Start/End: Original strand, 20569248 - 20569448
Alignment:
Q  11 atttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaaga 110  Q
    |||||||||||||||||||||| ||||||||||||||| || ||||| ||||||||||||  | |||| || ||||||| ||||||||||||||||||||    
T  20569248 atttcatcatctaagtgtggtgatttgttgttcgtcgtcttctgcggggttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaaga 20569347  T
Q  111 tcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatc--atatatttttgtaggcatt 208  Q
    ||||||||||||||||||||||  | |||||||||||| ||||  |||| ||| ||||||||||||||||||||| |||  |||||||||||||||||||    
T  20569348 tcgattattcaatcaaagattttggtgtcaacgttgcaaatccaaaggcaatggatattccggtcactttaatttcatcatatatatttttgtaggcatt 20569447  T
Q  209 a 209  Q
    |    
T  20569448 a 20569448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 8 - 209
Target Start/End: Complemental strand, 35965074 - 35964874
Alignment:
Q  8 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaa 107  Q
    |||||||| |||||  ||||||||||| |||||||||||||  |||| |||||||||||||||| | ||||| |  |||||| |||||||||||||| ||    
T  35965074 gtgatttcgtcatccgagtgtggtggtgtgttgttcgtcgtcctgtgtggcgttgtttgatttcccgtcttattgtggtgttcatttgattcatattaaa 35964975  T
Q  108 agatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcat 207  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||| |||| | |||||||||||||||||||||||||||||||| ||    
T  35964974 agatcgattattcaatcaaagatttggacgtcaacgttgcagatccggagg-catgagtatttcagtcactttaattttatcatatatttttgtaggaat 35964876  T
Q  208 ta 209  Q
    ||    
T  35964875 ta 35964874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 7 - 209
Target Start/End: Original strand, 14183792 - 14183992
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||| |||||||||||||||||||||||||||| || |||||||  ||||||||||||    ||||  | ||||||| ||||||||||||||||    
T  14183792 tgtgatttcaccatctaagtgtggtggtttgttgttcgtagtcttgtgcgt-gttgtttgattttctgtcttcatgcggtgttcatttgattcatattga 14183890  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    |||||||| |||||||||||||||||  |||||||||||||||| |||||| ||||| |||||||||||||||||||||||||| || ||||||||||||    
T  14183891 aagatcgactattcaatcaaagattttggcgtcaacgttgcagaaccggagaccatggatattccggtcactttaattttatcaaat-tttttgtaggca 14183989  T
Q  207 tta 209  Q
    |||    
T  14183990 tta 14183992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 7 - 209
Target Start/End: Complemental strand, 32952848 - 32952649
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    ||||||||| ||||||||||||| |||| ||||||| ||||| || ||||| |||||||||||| |||||||  ||||||||| |||| |||||||||||    
T  32952848 tgtgatttcgtcatctaagtgtgttggtgtgttgtttgtcgtcttatgcgg-gttgtttgattt-tcatcttgttacggtgttcatttaattcatattga 32952751  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    ||   |||||||||||||||||||||||||||||| ||||||| |||||| | |||| |||||||||||| |||||||||||| ||||||||||||||||    
T  32952750 aaatacgattattcaatcaaagatttgagcgtcaatgttgcaggtccgga-gtcatggatattccggtcaatttaattttatcttatatttttgtaggca 32952652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 17 - 209
Target Start/End: Complemental strand, 46991220 - 46991029
Alignment:
Q  17 tcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgatt 116  Q
    |||||| ||||||||||| ||||||| ||||| || || |||||||||||||||| ||||||  | ||||||| |||||||||||||||||| |||||||    
T  46991220 tcatctgagtgtggtggtgtgttgtttgtcgtcttctgtggcgttgtttgatttcccatcttgttgcggtgttcatttgattcatattgaaatatcgatt 46991121  T
Q  117 attcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    ||||||||||||||||| | ||||||||||||||||  || | |||   ||| ||| ||||||||||||||||||||||||||||||||||||    
T  46991120 attcaatcaaagatttgggtgtcaacgttgcagatctaga-gacatatgtatcccgatcactttaattttatcatatatttttgtaggcatta 46991029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 11 - 209
Target Start/End: Original strand, 49680534 - 49680728
Alignment:
Q  11 atttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaaga 110  Q
    |||||||||||||||||||||| |||||| |||||||| |||||  | ||||||||||||| | |||| || |||     ||||||||||||||||||||    
T  49680534 atttcatcatctaagtgtggtgatttgttattcgtcgtcttgtgttgtgttgtttgatttcacgtcttcgtgcggac---atttgattcatattgaaaga 49680630  T
Q  111 tcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    | |||| |||||||||| ||||| |||||||||||||||||||||| || ||| ||||| ||||||||||||||| |||||||||||||||||||||||    
T  49680631 tagattgttcaatcaaatatttgggcgtcaacgttgcagatccggatgcaatg-atatttcggtcactttaatttcatcatatatttttgtaggcatta 49680728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 8 - 209
Target Start/End: Complemental strand, 27593926 - 27593727
Alignment:
Q  8 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaa 107  Q
    |||||||| | |||| ||||||||||| ||||||||||| | ||||||| | || ||||||||| | ||||  | || ||||||||| ||||||||||||    
T  27593926 gtgatttcgttatctgagtgtggtggtgtgttgttcgtcatcttgtgcgactttttttgatttcccgtctttttgcgatgtttatttaattcatattgaa 27593827  T
Q  108 agatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcat 207  Q
    |||||||||||||||| ||||||||| | |||||| ||||||||| ||| ||||||| |||||| |||||||||||||||||||||||||||||||| ||    
T  27593826 agatcgattattcaataaaagatttg-gagtcaacattgcagatctgga-gccatgagtattcctgtcactttaattttatcatatatttttgtaggaat 27593729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 8 - 209
Target Start/End: Original strand, 12265445 - 12265653
Alignment:
Q  8 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaa 107  Q
    |||||||  |||||| ||||||| ||||||||||||||||| | |||||||||||||||||||||| | |   |  |||||| | |||||||||||||||    
T  12265445 gtgattttgtcatctgagtgtggcggtttgttgttcgtcgtct-gtgcggcgttgtttgatttctcgtatcgttgtggtgttcacttgattcatattgaa 12265543  T
Q  108 agatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggc--------catgaatattccggtcactttaattttatcatatattttt 199  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||        ||||  ||||||  ||||||||||||||||||||||||||    
T  12265544 agatcaattattcaatcaaagatttgagcgtcaacgttgcagatccggaggcatggaagacatgggtattccaatcactttaattttatcatatattttt 12265643  T
Q  200 gtaggcatta 209  Q
     |||||||||    
T  12265644 ttaggcatta 12265653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 209
Target Start/End: Complemental strand, 18139011 - 18138812
Alignment:
Q  9 tgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaa 108  Q
    ||||||| ||| || ||||||||||| ||||||||||||| |||||||||||||||||||||  ||||||  | | ||||| ||||||||  ||||||||    
T  18139011 tgatttcgtcacctgagtgtggtggtgtgttgttcgtcgtcttgtgcggcgttgtttgattttccatcttgttgcagtgttcatttgatttctattgaaa 18138912  T
Q  109 gatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatt 208  Q
    ||||||||||||||||| | ||||| |||||||||||||||||| || || |||   ||||||| |||||| ||||||||||||||||||||||| ||||    
T  18138911 gatcgattattcaatcacatatttgggcgtcaacgttgcagatctgg-gggcattggtattccgatcacttaaattttatcatatatttttgtagtcatt 18138813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 209
Target Start/End: Complemental strand, 49126224 - 49126025
Alignment:
Q  9 tgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaa 108  Q
    ||||||| ||| || ||||||||||| ||||||||||||| |||||||||||||||||||||  ||||||  | | ||||| ||||||||  ||||||||    
T  49126224 tgatttcgtcacctgagtgtggtggtgtgttgttcgtcgtcttgtgcggcgttgtttgattttccatcttgttgcagtgttcatttgatttctattgaaa 49126125  T
Q  109 gatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatt 208  Q
    ||||||||||||||||| | ||||| |||||||||||||||||| || || |||   ||||||| |||||| ||||||||||||||||||||||| ||||    
T  49126124 gatcgattattcaatcacatatttgggcgtcaacgttgcagatctgg-gggcattggtattccgatcacttaaattttatcatatatttttgtagtcatt 49126026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 10 - 177
Target Start/End: Complemental strand, 9645646 - 9645479
Alignment:
Q  10 gatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaag 109  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||  | || | || || |||| |||||||||||||||| ||    
T  9645646 gatttcatcatctaagtgtggtggtgtgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcgtcgtgcgctgttcatttgattcatattgagag 9645547  T
Q  110 atcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcac 177  Q
    ||   | ||||||| ||||||||| |||||||| |||||||||||||||| ||| |||||||||||||    
T  9645546 ataagtaattcaataaaagatttgggcgtcaacattgcagatccggaggcgatggatattccggtcac 9645479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 8 - 209
Target Start/End: Complemental strand, 3336256 - 3336062
Alignment:
Q  8 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcgg-cgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||  |||||| ||||||||||| |||||||||||||  ||||||| |||||||||||||  ||||||  | ||||||| ||||||||||||||||    
T  3336256 gtgattttgtcatctgagtgtggtggtgtgttgttcgtcgtcctgtgcggacgttgtttgattttccatcttgttgcggtgttcatttgattcatattga 3336157  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    ||||| ||||||||||||||||||||| |||||| | ||||||||||||||       | |||||| ||| |||||||||||||||||| ||||||||||    
T  3336156 aagattgattattcaatcaaagatttg-gcgtcagcattgcagatccggag-------acattccgatcattttaattttatcatatatatttgtaggca 3336065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 27 - 209
Target Start/End: Complemental strand, 52097996 - 52097814
Alignment:
Q  27 gtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaa 126  Q
    |||||||| ||||||| || || |||||| | ||||||||||||| | | ||  |   ||||| |||||||||||||||||||||| |||||||||||||    
T  52097996 gtggtggtgtgttgtttgttgtcttgtgcagagttgtttgatttcccctattcttgtagtgttcatttgattcatattgaaagatcaattattcaatcaa 52097897  T
Q  127 agatttgagc-gtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    ||||||| || |||||||||||||||| ||| || ||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  52097896 agatttgggccgtcaacgttgcagatctggatgc-atggatattccggtcactttaattttatcatatatctttgtaggcatta 52097814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 24 - 157
Target Start/End: Original strand, 2624502 - 2624636
Alignment:
Q  24 agtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaaga-tcgattattcaa 122  Q
    ||||||||||| ||||||||||||| ||||||||||| |||||||||| | ||||  | |||||||||||||||||||||||||||| ||||||||||||    
T  2624502 agtgtggtggtgtgttgttcgtcgtcttgtgcggcgtagtttgatttcccgtcttgttgcggtgtttatttgattcatattgaaagattcgattattcaa 2624601  T
Q  123 tcaaagatttgagcgtcaacgttgcagatccggag 157  Q
    ||||||| ||| |||||||||||||||||| ||||    
T  2624602 tcaaagaattgggcgtcaacgttgcagatctggag 2624636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 7 - 133
Target Start/End: Original strand, 56194590 - 56194716
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| | ||||  | ||||||| |||| |||| ||||||    
T  56194590 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattcctattga 56194689  T
Q  107 aagatcgattattcaatcaaagatttg 133  Q
    ||||||||||||| |||||||||||||    
T  56194690 aagatcgattatttaatcaaagatttg 56194716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 8 - 209
Target Start/End: Original strand, 21090142 - 21090333
Alignment:
Q  8 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaa 107  Q
    ||||||||||||||||| | ||||||||||||||||||||| |||| || ||||||||||||| || | ||  | ||||||| |||||||||||||||||    
T  21090142 gtgatttcatcatctaaatatggtggtttgttgttcgtcgtcttgtacgacgttgtttgatttttcgtttttttgcggtgttcatttgattcatattgaa 21090241  T
Q  108 agatcgat--tattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggc 205  Q
     |||  ||  ||||||||||||||||||            ||||||||||| | |||||||||||||||||||||||||||||||| || ||||||||||    
T  21090242 ggataaattatattcaatcaaagatttg-----------ggcagatccggaag-catgaatattccggtcactttaattttatcatctacttttgtaggc 21090329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 8 - 209
Target Start/End: Original strand, 35261181 - 35261383
Alignment:
Q  8 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaa 107  Q
    ||||||| ||||||||||||||||||| ||||||| ||||| || ||||||||||||||||||  | ||||  | ||||||| |||||||||||||| ||    
T  35261181 gtgatttgatcatctaagtgtggtggtgtgttgtttgtcgtcttctgcggcgttgtttgattttccgtcttcttgcggtgttcatttgattcatattaaa 35261280  T
Q  108 agatcga----ttattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtag 203  Q
    ||||| |    | ||||||||||||| ||| |  ||||||||||||||||||| | ||||  |||| |||||| ||||||||||||| |||| |||||||    
T  35261281 agatcaactattcattcaatcaaagaattg-gtttcaacgttgcagatccgga-gacatg-gtatttcggtcattttaattttatcagatatgtttgtag 35261377  T
Q  204 gcatta 209  Q
     |||||    
T  35261378 acatta 35261383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 84 - 193
Target Start/End: Original strand, 23100745 - 23100853
Alignment:
Q  84 ggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaat 183  Q
    |||||| |||||||||||||||||||||| ||||||||||||| |||||||| ||||| ||||||||||| || | ||||  |||| |||||| ||||||    
T  23100745 ggtgttcatttgattcatattgaaagatcaattattcaatcaatgatttgagtgtcaaagttgcagatcc-gatgtcatgggtatttcggtcaatttaat 23100843  T
Q  184 tttatcatat 193  Q
    | ||||||||    
T  23100844 tgtatcatat 23100853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 137 - 209
Target Start/End: Original strand, 56199215 - 56199287
Alignment:
Q  137 gtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    |||||||||||||||||| | ||||||||||||||| | |||||||||||||||||||||||||||| |||||    
T  56199215 gtcaacgttgcagatccgaaagccatgaatattccgatgactttaattttatcatatatttttgtagacatta 56199287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 36 - 193
Target Start/End: Original strand, 26123280 - 26123436
Alignment:
Q  36 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgag 135  Q
    ||||||||||||| |||||||| ||||||| |||| |||||||  |   ||||| ||||| ||| |||||||||||||  | |||||| || || ||| |    
T  26123280 tgttgttcgtcgttttgtgcggtgttgtttaatttttcatcttgttgtagtgttcatttggttcttattgaaagatcggctcttcaatgaatgacttgtg 26123379  T
Q  136 cgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatat 193  Q
    |||||| |||||| ||||||||| ||||| ||||   |||||||||||||||||||||    
T  26123380 cgtcaatgttgcaaatccggagg-catgagtattattgtcactttaattttatcatat 26123436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 84 - 192
Target Start/End: Original strand, 36184599 - 36184706
Alignment:
Q  84 ggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaat 183  Q
    |||||| ||||||||  ||||||||||||| |||||||||||| |||||  | |||||||||| ||||| ||||| ||| ||||||  ||||||||| ||    
T  36184599 ggtgttcatttgatttctattgaaagatcggttattcaatcaatgattttggtgtcaacgttgtagatcaggagg-cataaatattatggtcactttgat 36184697  T
Q  184 tttatcata 192  Q
    |||||||||    
T  36184698 tttatcata 36184706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 118 - 193
Target Start/End: Complemental strand, 28834238 - 28834164
Alignment:
Q  118 ttcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatat 193  Q
    ||||||||| ||||| || |||||||||| |||||||||| | |||| ||||||||||||||||||||||||||||    
T  28834238 ttcaatcaacgattttagtgtcaacgttgtagatccggagac-atgactattccggtcactttaattttatcatat 28834164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 193
Target Start/End: Complemental strand, 43353629 - 43353468
Alignment:
Q  36 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaaga-----tcgattattcaatcaaagat 130  Q
    ||||||||||||| ||||| | ||||||||||||| | |||||  ||||  ||| ||||||||| |||||||| |     ||| |||||||||||| |||    
T  43353629 tgttgttcgtcgtcttgtgtgtcgttgtttgattttttatcttgttacgtcgttcatttgattcctattgaaataaaatatcggttattcaatcaatgat 43353530  T
Q  131 ttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatat 193  Q
    |||||||||||||||||| || |||| |  || | |||| |  ||||||||||||||||||||    
T  43353529 ttgagcgtcaacgttgcaaattcggatg-aataagtatttcaatcactttaattttatcatat 43353468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 155 - 209
Target Start/End: Complemental strand, 9645476 - 9645422
Alignment:
Q  155 gaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    ||||| ||| |||||||||||||||||||||||||||||| ||||||||| ||||    
T  9645476 gaggcgatggatattccggtcactttaattttatcatatacttttgtaggtatta 9645422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 112
Target Start/End: Complemental strand, 52934072 - 52933970
Alignment:
Q  11 atttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgttta-tttgattcatattgaaag 109  Q
    |||||||| ||| |||| || | | ||||||||||| | |||||| ||||||||||||||| ||||||  | ||||| ||| ||||||||||||||||||    
T  52934072 atttcatcgtctgagtgcggcgttgtgttgttcgtcattttgtgcagcgttgtttgatttcgcatcttgttgcggtgcttattttgattcatattgaaag 52933973  T
Q  110 atc 112  Q
    |||    
T  52933972 atc 52933970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 207
Target Start/End: Complemental strand, 1931692 - 1931651
Alignment:
Q  166 tattccggtcactttaattttatcatatatttttgtaggcat 207  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  1931692 tattccagtcactttaattttatcatatatttttgtaggcat 1931651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 112
Target Start/End: Original strand, 28857379 - 28857484
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||| |||||||| || | | |||||||||| || |||||||||||||||||||| | | |||   | |||||||  |||| ||||||||||    
T  28857379 tgtgatttcatcgtctaagtgcggcgttgtgttgttcgttgtcttgtgcggcgttgtttgattccgcgtctagttgcggtgttcgtttgtttcatattga 28857478  T
Q  107 aagatc 112  Q
    ||||||    
T  28857479 aagatc 28857484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 100
Target Start/End: Complemental strand, 1931816 - 1931723
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattca 100  Q
    |||||||||||||||||||||| ||||| ||||||||  ||| |||| || | |||||| ||||| | ||||  | ||||||| ||||||||||    
T  1931816 tgtgatttcatcatctaagtgtagtggtgtgttgttcaccgtcttgtccgacattgtttcatttcccgtcttgttgcggtgttcatttgattca 1931723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 7273776 - 7273712
Alignment:
Q  144 ttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    ||||||||||||| || |||| |||| | || | ||||||||||||||||||||||||||||||||    
T  7273776 ttgcagatccggaagc-atgagtatttcagttattttaattttatcatatatttttgtaggcatta 7273712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 186
Target Start/End: Original strand, 40068694 - 40068778
Alignment:
Q  101 tattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaatttt 186  Q
    ||||||||||| |  |||||||| || | || || |||||||||||||||||| ||| | |||||||||||| |||||||||||||    
T  40068694 tattgaaagattggctattcaattaatgtttcgaccgtcaacgttgcagatccagagac-atgaatattccgatcactttaatttt 40068778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 9643394 - 9643470
Alignment:
Q  36 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatc 112  Q
    ||||||||||||| ||| ||| |||||||||||||||||||||  | | |||||  |||| |||||||| |||||||    
T  9643394 tgttgttcgtcgtcttgagcgacgttgtttgatttctcatcttgttgcagtgttcgtttggttcatattaaaagatc 9643470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 156
Target Start/End: Original strand, 21662541 - 21662577
Alignment:
Q  120 caatcaaagatttgagcgtcaacgttgcagatccgga 156  Q
    ||||||| |||||||||||||||||||||||||||||    
T  21662541 caatcaatgatttgagcgtcaacgttgcagatccgga 21662577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 156
Target Start/End: Original strand, 21671305 - 21671341
Alignment:
Q  120 caatcaaagatttgagcgtcaacgttgcagatccgga 156  Q
    ||||||| |||||||||||||||||||||||||||||    
T  21671305 caatcaatgatttgagcgtcaacgttgcagatccgga 21671341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 111
Target Start/End: Complemental strand, 26742428 - 26742380
Alignment:
Q  63 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||||| | ||||||| |||||||||||||||||| ||||||||||    
T  26742428 tttgatttcccgtcttagtgcggtgtttatttgattcagattgaaagat 26742380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 76
Target Start/End: Original strand, 36194711 - 36194751
Alignment:
Q  36 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatc 76  Q
    ||||||||||||| |||||||||||||||||||||| ||||    
T  36194711 tgttgttcgtcgtcttgtgcggcgttgtttgatttcgcatc 36194751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 189
Target Start/End: Complemental strand, 49072785 - 49072682
Alignment:
Q  85 gtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaatt 184  Q
    ||||| ||||| |||||||||||||||| | |||||||| || |||||  | |||||||||||| |||| || | ||| ||||||||  ||||||| |||    
T  49072785 gtgttcatttggttcatattgaaagatcaactattcaattaatgatttaggtgtcaacgttgcatatcctga-gacataaatattccaatcactttcatt 49072687  T
Q  185 ttatc 189  Q
    |||||    
T  49072686 ttatc 49072682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 51888314 - 51888238
Alignment:
Q  36 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatc 112  Q
    |||||||| |||| || |||| |||||||||||||| ||||||  | |||||||  |||| ||||||||||||||||    
T  51888314 tgttgttcatcgtcttatgcgacgttgtttgatttcgcatcttgttgcggtgttcgtttggttcatattgaaagatc 51888238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 52944317 - 52944393
Alignment:
Q  36 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatc 112  Q
    ||||||||||||| |||||||||||||||| ||||  | ||||  | |||||||  |||| ||||||||||||||||    
T  52944317 tgttgttcgtcgttttgtgcggcgttgtttaattttgcgtcttgttgcggtgttcgtttgtttcatattgaaagatc 52944393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 99
Target Start/End: Complemental strand, 55600498 - 55600466
Alignment:
Q  67 atttctcatcttagtacggtgtttatttgattc 99  Q
    |||||||||||||||||||||||||||||||||    
T  55600498 atttctcatcttagtacggtgtttatttgattc 55600466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 71
Target Start/End: Original strand, 22300855 - 22300890
Alignment:
Q  36 tgttgttcgtcgtattgtgcggcgttgtttgatttc 71  Q
    ||||||||||||| ||||||||||||||||||||||    
T  22300855 tgttgttcgtcgtcttgtgcggcgttgtttgatttc 22300890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 208
Target Start/End: Original strand, 22611284 - 22611373
Alignment:
Q  117 attcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatt 208  Q
    |||||| ||| ||||||  ||||||||||||||||||||| | ||||| |||| |||| |||| | ||||||||||| | ||||||||||||    
T  22611284 attcaaccaatgatttggacgtcaacgttgcagatccggaag-catgagtatttcggtgacttaagttttatcatat-tatttgtaggcatt 22611373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 156
Target Start/End: Original strand, 33921155 - 33921194
Alignment:
Q  117 attcaatcaaagatttgagcgtcaacgttgcagatccgga 156  Q
    ||||||||||  ||||||||||||||||||||||||||||    
T  33921155 attcaatcaataatttgagcgtcaacgttgcagatccgga 33921194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 208
Target Start/End: Original strand, 53811129 - 53811218
Alignment:
Q  117 attcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatt 208  Q
    |||||| ||| ||||||  ||||||||||||||||||||| | ||||| |||| |||| |||| | ||||||||||| | ||||||||||||    
T  53811129 attcaaccaatgatttggacgtcaacgttgcagatccggaag-catgagtatttcggtgacttaagttttatcatat-tatttgtaggcatt 53811218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 133
Target Start/End: Original strand, 1008322 - 1008364
Alignment:
Q  91 atttgattcatattgaaagatcgattattcaatcaaagatttg 133  Q
    |||||||||||||| ||| ||||||||||||||||| ||||||    
T  1008322 atttgattcatattaaaatatcgattattcaatcaatgatttg 1008364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 111
Target Start/End: Original strand, 29922989 - 29923039
Alignment:
Q  61 tgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||||||  | ||||||||||||||||||||||||||  |||||||||    
T  29922989 tgtttgattttccgtcttagtacggtgtttatttgattcaggttgaaagat 29923039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 32766494 - 32766548
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgtt 61  Q
    ||||||||| || |||||||| |||| | ||||||||||||| ||||||||||||    
T  32766494 tgtgatttcgtcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcggcgtt 32766548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 70
Target Start/End: Complemental strand, 47320494 - 47320460
Alignment:
Q  36 tgttgttcgtcgtattgtgcggcgttgtttgattt 70  Q
    ||||||||||||| |||||||||||||||||||||    
T  47320494 tgttgttcgtcgtcttgtgcggcgttgtttgattt 47320460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 108
Target Start/End: Complemental strand, 2069711 - 2069611
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    ||||||||| | |||||||||||| | | ||| ||||||| |  |||||| |||||||||||||| ||||||  | |||| || ||||| ||||||||||    
T  2069711 tgtgatttctttatctaagtgtggcgttatgt-gttcgtcatcctgtgcgacgttgtttgatttcgcatcttgttgcggtattcatttggttcatattga 2069613  T
Q  107 aa 108  Q
    ||    
T  2069612 aa 2069611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 111
Target Start/End: Complemental strand, 32616825 - 32616776
Alignment:
Q  62 gtttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    |||||||||| | ||||||| ||||||||||||||||||  |||||||||    
T  32616825 gtttgatttcccgtcttagtgcggtgtttatttgattcaagttgaaagat 32616776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 108
Target Start/End: Complemental strand, 36204516 - 36204415
Alignment:
Q  8 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcgg-cgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||| || |||||||| || | | |||||||||||||  ||| ||| |||||||||||||| ||| ||  | ||||||| ||||| ||||||||||    
T  36204516 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcctgtacgggcgttgtttgatttcgcatattgttgcggtgttcatttggttcatattga 36204417  T
Q  107 aa 108  Q
    ||    
T  36204416 aa 36204415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 112
Target Start/End: Complemental strand, 44757007 - 44756958
Alignment:
Q  63 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagatc 112  Q
    ||||||||  ||||||||| ||||||||||||||||||  ||||||||||    
T  44757007 tttgattttccatcttagtgcggtgtttatttgattcaggttgaaagatc 44756958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 4142884 - 4142820
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttc 71  Q
    ||||||||| || |||||||| || | | ||||||||||||| ||||||||||  ||||||||||    
T  4142884 tgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcggcgtttgatttc 4142820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 111
Target Start/End: Complemental strand, 7861171 - 7861123
Alignment:
Q  63 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||||| | ||||||| ||||||||||||||||||  |||||||||    
T  7861171 tttgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagat 7861123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 193
Target Start/End: Complemental strand, 19853520 - 19853445
Alignment:
Q  117 attcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatat 193  Q
    |||||| ||| ||||||  ||||||||||||||||||||| | |||| ||||| |||| |||| | |||||||||||    
T  19853520 attcaaccaatgatttggacgtcaacgttgcagatccggaag-catggatatttcggtgacttaagttttatcatat 19853445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 111
Target Start/End: Complemental strand, 20399868 - 20399820
Alignment:
Q  63 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||||| | ||||||| ||||||||||||||||||  |||||||||    
T  20399868 tttgatttcccgtcttagtgcggtgtttatttgattcagtttgaaagat 20399820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 111
Target Start/End: Original strand, 24789345 - 24789393
Alignment:
Q  63 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||||||| ||||||| | ||||||||||||||||  |||||||||    
T  24789345 tttgatttctcgtcttagtgcagtgtttatttgattcaggttgaaagat 24789393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 111
Target Start/End: Complemental strand, 24818914 - 24818866
Alignment:
Q  63 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||||||| ||||||| | ||||||||||||||||  |||||||||    
T  24818914 tttgatttctcgtcttagtgcagtgtttatttgattcaggttgaaagat 24818866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 76
Target Start/End: Original strand, 27651946 - 27651986
Alignment:
Q  36 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatc 76  Q
    ||||||||||||| |||||||| ||||||||||||| ||||    
T  27651946 tgttgttcgtcgtcttgtgcggtgttgtttgatttcgcatc 27651986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 111
Target Start/End: Complemental strand, 29268742 - 29268694
Alignment:
Q  63 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||||| | ||||||| ||||||||||||||||||  |||||||||    
T  29268742 tttgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagat 29268694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 111
Target Start/End: Original strand, 39523569 - 39523613
Alignment:
Q  67 atttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||| ||||||| ||||||||||||||||||  |||||||||    
T  39523569 atttctcgtcttagtgcggtgtttatttgattcaggttgaaagat 39523613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 111
Target Start/End: Complemental strand, 40198510 - 40198462
Alignment:
Q  63 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||||||| |||||||  |||||||||||||||||  |||||||||    
T  40198510 tttgatttctcgtcttagtgtggtgtttatttgattcaggttgaaagat 40198462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 111
Target Start/End: Complemental strand, 43493252 - 43493204
Alignment:
Q  63 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||||| ||||||||| | ||||||||||||||||  |||||||||    
T  43493252 tttgatttcccatcttagtgctgtgtttatttgattcaggttgaaagat 43493204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 159; Significance: 8e-85; HSPs: 68)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 7 - 209
Target Start/End: Complemental strand, 27266959 - 27266757
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||| | |||| || ||||||| ||||||||||||||||    
T  27266959 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcactgtttgatttcccgtcttcgtgcggtgttcatttgattcatattga 27266860  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  27266859 aagatcgattattcaatcaaagatttgaccgtcaacgttgcagatccggaggtcatggatattccggtcactttaattttatcatatatttttgtaggca 27266760  T
Q  207 tta 209  Q
    |||    
T  27266759 tta 27266757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 9 - 209
Target Start/End: Complemental strand, 2057936 - 2057736
Alignment:
Q  9 tgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaa 108  Q
    |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| | |||| || ||||||| ||||||||||||||||||    
T  2057936 tgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgcgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaa 2057837  T
Q  109 gatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatt 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || |||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  2057836 gatcgattattcaatcaaagatttgagcgtcaacgttgcagatccagatgccatggatattccggtcactataattttatcatatatttttgtaggcatt 2057737  T
Q  209 a 209  Q
    |    
T  2057736 a 2057736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 7 - 209
Target Start/End: Complemental strand, 19259911 - 19259710
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| | | |||| || ||||||||||||||||||||||||    
T  19259911 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgattcc-cgtcttcgtgcggtgtttatttgattcatattga 19259813  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||  |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  19259812 aagatcgattattcaatcaaagatttgggcgtcaacgttgcagatccaaaggccatggatattccggtcactttaattttatcatatatttttgtaggca 19259713  T
Q  207 tta 209  Q
    |||    
T  19259712 tta 19259710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 7 - 209
Target Start/End: Original strand, 34881697 - 34881898
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | |||| || ||||||| ||||||||||||||||    
T  34881697 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattga 34881796  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||||||    
T  34881797 aagatcaattattcaatcaaagatttgggcgtcaacgttgcagatccggaggccatggatattcc-gtcactttaattatatcatatatttttgtaggca 34881895  T
Q  207 tta 209  Q
    |||    
T  34881896 tta 34881898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 7 - 209
Target Start/End: Complemental strand, 41184540 - 41184338
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | |||| ||  ||||||  |||||||||||||||    
T  41184540 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgtggtgttcgtttgattcatattga 41184441  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||  ||||    
T  41184440 aagatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggaggccatggatattccagtcactttaattttatcatatatttttgccggca 41184341  T
Q  207 tta 209  Q
    |||    
T  41184340 tta 41184338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 9 - 209
Target Start/End: Original strand, 30298189 - 30298388
Alignment:
Q  9 tgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaa 108  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||  | ||||  | |||||||||||||||||||||||||     
T  30298189 tgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgctgtttgattttccgtcttcttgcggtgtttatttgattcatattgaa- 30298287  T
Q  109 gatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatt 208  Q
    ||| ||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  30298288 gattgattattcaatcaaagatttgggcgtcaacgttgcagatctggaggccatggatattccggccactttaattttatcatatatttttgtaggcatt 30298387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 7 - 200
Target Start/End: Original strand, 42579867 - 42580060
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||||||||    |||| || | ||||| |||| ||||||||| |    
T  42579867 tgtgatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcgacgttgtttgattttctgtcttcgtgcagtgttcattttattcatattta 42579966  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttg 200  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42579967 aagatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttg 42580060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 7 - 209
Target Start/End: Complemental strand, 18677565 - 18677363
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||  | |||| |||||||||| ||||||||||||||||    
T  18677565 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgggacgttgtttgattttccgtcttcgtacggtgttcatttgattcatattga 18677466  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    ||||||||||||| ||||||| | ||  |||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||    
T  18677465 aagatcgattatttaatcaaataatttggcgtcaacattgcagatccggagaccatggatattccggtcactttaattttatcatatatttttgtaagca 18677366  T
Q  207 tta 209  Q
    |||    
T  18677365 tta 18677363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 7 - 209
Target Start/End: Complemental strand, 3271502 - 3271300
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||  | |||| || ||||||| ||||||||||||||||    
T  3271502 tgtgatttcatcatctaagtgtggtggtttgttattcgtcgtcttgtgcagcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattga 3271403  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    |||||| |||||| |||||||||||||  ||||||||||||||||| |||| ||||| |||||||| ||||||||||||||||||||||||||||| |||    
T  3271402 aagatccattatttaatcaaagatttggacgtcaacgttgcagatcaggagaccatggatattccgatcactttaattttatcatatatttttgtaagca 3271303  T
Q  207 tta 209  Q
    |||    
T  3271302 tta 3271300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 7 - 209
Target Start/End: Complemental strand, 19281045 - 19280843
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| |||  ||||||  | | ||||| |||| |||| ||||||    
T  19281045 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcagcgttgtttgcttttccatcttcttgcagtgttcattttattcctattga 19280946  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||| ||| |||||||||| |||||||| ||||||||||||||||||||||    
T  19280945 aagatcgattattcaatcaaagatttggacgtcaacgttgcagatccggaggctatggatattccggtgactttaatattatcatatatttttgtaggca 19280846  T
Q  207 tta 209  Q
    |||    
T  19280845 tta 19280843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 7 - 209
Target Start/End: Complemental strand, 43261919 - 43261717
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||| ||||||||||||||||||||||||||||||||| || ||||| ||||||||||||  | ||||  | ||||||||||||||||||||||||    
T  43261919 tgtgattttatcatctaagtgtggtggtttgttgttcgtcgtcttatgcggtgttgtttgattttccgtcttcttgcggtgtttatttgattcatattga 43261820  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    || |||||||||||||||||||||||| | ||||| |||||||||||| ||| |||| ||||||||||||||||||| ||||||||||||||||||||||    
T  43261819 aaaatcgattattcaatcaaagatttgggagtcaaagttgcagatccgaaggtcatggatattccggtcactttaatgttatcatatatttttgtaggca 43261720  T
Q  207 tta 209  Q
    |||    
T  43261719 tta 43261717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 7 - 207
Target Start/End: Complemental strand, 35475437 - 35475238
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||| || |||||||||||||||||||||||| || ||||||| ||||||||||||| ||||  | ||||||| |||||||||||||| |    
T  35475437 tgtgatttcatcatttacgtgtggtggtttgttgttcgtcgttttatgcggcgctgtttgatttctcgtcttcttgcggtgttcatttgattcatatt-a 35475339  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| | || |||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  35475338 aagatcgattattcaatcaaagatttgggcgtcaacgttgcagattcagaagccatggatattccagtcactttaattttatcatatatttttgtaggca 35475239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 7 - 209
Target Start/End: Original strand, 7246938 - 7247140
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||  ||||   ||||  | ||||||| |||| |||| ||||||    
T  7246938 tgtgatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggcgttattttttttcctgtcttcttgcggtgttcattttattcctattga 7247037  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
     ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  7247038 tagatcgattatacaatcaaagatttgaacgtcaacgttgcagatccggaggccatggatattccggtgactttaattttatcatatatttttgtaggca 7247137  T
Q  207 tta 209  Q
    |||    
T  7247138 tta 7247140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 11 - 209
Target Start/End: Original strand, 26578235 - 26578433
Alignment:
Q  11 atttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaaga 110  Q
    |||||||||||||| ||| ||| ||||||||||||||| ||||||| |||||||||||||| | |||| || | ||||| ||||||||||||||||||||    
T  26578235 atttcatcatctaaatgtagtgatttgttgttcgtcgtcttgtgcgacgttgtttgatttcccgtcttcgtgcagtgttcatttgattcatattgaaaga 26578334  T
Q  111 tcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    |||||| |||||||||||||||| ||||||| |||||||||||||| || ||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  26578335 tcgattgttcaatcaaagatttgggcgtcaatgttgcagatccggaagcaatgaatatttcggtcactttaatttcatcatatatttttgtaggcatta 26578433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 7 - 209
Target Start/End: Original strand, 16981269 - 16981473
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||||| ||||  | ||||  | |||||||  |||||||||||||||    
T  16981269 tgtgatttcatcatctaagtgcggtggtttgttgttcgtcgtcttgtgcggcattgtttaattttccgtcttcttgcggtgttcctttgattcatattga 16981368  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatc--atatatttttgtagg 204  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||||| |||| |||||||||| ||||||||||||||  |||||||||||||||    
T  16981369 aagatcgattattcaatcaaagatttgggcgtcatcgttgcagatccggaggtcatggatattccggtgactttaattttatcatatatatttttgtagg 16981468  T
Q  205 catta 209  Q
    |||||    
T  16981469 catta 16981473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 8 - 209
Target Start/End: Complemental strand, 21060381 - 21060181
Alignment:
Q  8 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaa 107  Q
    ||||| ||||||||||||||||||||||||||||||||||| |||||||||  | ||||||||| | ||||  | | ||||| || | |||||| |||||    
T  21060381 gtgatgtcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcactttttgatttcccgtcttcttgcagtgttcatctaattcattttgaa 21060282  T
Q  108 agatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcat 207  Q
     ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  21060281 -gatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggaggccatggatattccggtcactttaattttatcatatatttttgtaggcat 21060183  T
Q  208 ta 209  Q
    ||    
T  21060182 ta 21060181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 7 - 209
Target Start/End: Original strand, 781368 - 781569
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||||||||| |||||||||||||||||||||  ||||||||  ||||||||||| | ||||  | ||||||| || |||||||| ||||    
T  781368 tgtgatttcatcatctaagtatggtggtttgttgttcgtcgtcatgtgcggcactgtttgatttcccgtcttcttgcggtgttcatctgattcattttga 781467  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    | |||| |||||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||    
T  781468 a-gatcaattattcaatcaaaaatttgagcgtcaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatttttgtagaca 781566  T
Q  207 tta 209  Q
    |||    
T  781567 tta 781569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 7 - 209
Target Start/End: Complemental strand, 7150435 - 7150233
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| | ||||  | ||||||| |||| ||||  |||||    
T  7150435 tgtgctttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattcccattga 7150336  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    |||||| ||||||||||||||||||||  |||||||||||||||||||||| ||||| ||||| |||| |||||||||||||||||||||||||||| ||    
T  7150335 aagatcaattattcaatcaaagatttggacgtcaacgttgcagatccggagaccatggatatttcggtgactttaattttatcatatatttttgtagtca 7150236  T
Q  207 tta 209  Q
    |||    
T  7150235 tta 7150233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 7 - 209
Target Start/End: Original strand, 10649626 - 10649825
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    ||||||||||||||||||||||||   ||||||||||||||| |||||||||||||||||||||  | |||| || ||||||| ||||||||| ||  ||    
T  10649626 tgtgatttcatcatctaagtgtgg---tttgttgttcgtcgtcttgtgcggcgttgtttgatttaccgtcttcgtgcggtgttcatttgattcttacaga 10649722  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    || ||  |||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  10649723 aaaatttattattcaatcaaatatttgggcgtcaacgttgcagatccggaggccatggatattccggtcactttaattttatcatatgtttttgtaggca 10649822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 7 - 209
Target Start/End: Original strand, 7241762 - 7241965
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||||||| ||||||| ||||||||||||||| |||||||||||| |||  ||||   ||||  | ||||||| |||| |||| ||||||    
T  7241762 tgtgatttcatcatctaattgtggtgatttgttgttcgtcgtcttgtgcggcgttattttctttcctgtcttcttgcggtgttcattttattcctattga 7241861  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccgg-tcactttaattttatcatatatttttgtaggc 205  Q
     ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||    
T  7241862 tagatcgattatacaatcaaagatttgaacgtcaacgttgcagatccggaggccatggatattccggttgactttaattttatcatatatttttgtaggc 7241961  T
Q  206 atta 209  Q
    ||||    
T  7241962 atta 7241965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 7 - 209
Target Start/End: Original strand, 43148710 - 43148908
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||| | ||||  | || |||| |||| |||| ||||||    
T  43148710 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgctttcccgtcttcttgcgttgttcattttattcctattga 43148809  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    ||||||||||||    |||||||||||  | ||||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  43148810 aagatcgattat----tcaaagatttggacctcaacgttgcagatctggaggccatggatattccggtgactttaattttatcatatatttttgtaggca 43148905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 7 - 209
Target Start/End: Original strand, 27751905 - 27752106
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||||||||||||||||||||||||||||||  || || |||| | ||||||||| | ||||  | ||||||| ||||||||||||||||    
T  27751905 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgccttttggggcgctatttgatttcccgtcttcttgcggtgttcatttgattcatattga 27752004  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    |  || |||||||| ||||||||| || | |||||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  27752005 at-attgattattcgatcaaagatatgggtgtcaacgttgcagatctggaggccatagatattccggtcactttaattttatcatatatttttgtaggca 27752103  T
Q  207 tta 209  Q
    |||    
T  27752104 tta 27752106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 41 - 209
Target Start/End: Original strand, 4954005 - 4954173
Alignment:
Q  41 ttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtca 140  Q
    |||||||| ||||||||||||||||  |||| | ||||  | ||||||| |||| |||| |||||||||||||||||||||||||||||||||  |||||    
T  4954005 ttcgtcgtcttgtgcggcgttgttttctttcccgtcttcttgcggtgttcattttattcctattgaaagatcgattattcaatcaaagatttggacgtca 4954104  T
Q  141 acgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  4954105 acgttgcagattcggaggccatgaatattccggtgactttaattttatcatatatttttgtaggcatta 4954173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 8 - 209
Target Start/End: Original strand, 42886458 - 42886659
Alignment:
Q  8 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaa 107  Q
    ||||||||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||||| |  |||  | | ||||| |||||||||||||| ||    
T  42886458 gtgatttcatcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggcgttgtttgatttcccgccttgttgcagtgttcatttgattcatattaaa 42886557  T
Q  108 agatcgattattcaatcaaagatttgagcgtcaacgttgcagatccg--gaggccatgaatattccggtcactttaattttatcatatatttttgtaggc 205  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||  || | ||||  ||||||||||| ||||||||||| ||||||||||||||||    
T  42886558 agatcgattattcaatcaaagatttga-cgtcaacgttgcagatccgaagacggcatg-gtattccggtcaatttaattttataatatatttttgtaggc 42886655  T
Q  206 atta 209  Q
    ||||    
T  42886656 atta 42886659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 7 - 209
Target Start/End: Original strand, 28235564 - 28235766
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    ||||||||||||||||||||||| |||||||||||  ||||| |||||||||||||||||||||  ||||||  | ||||||| |||| |||| ||||||    
T  28235564 tgtgatttcatcatctaagtgtgatggtttgttgtctgtcgtcttgtgcggcgttgtttgattttccatcttcttgcggtgttcattttattcttattga 28235663  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    |||||| | ||||||||||||||||   ||||||| | || ||||| |||||||||| ||||| || |||||||||||||||||||||||||||||||||    
T  28235664 aagatcaagtattcaatcaaagattcaggcgtcaaagatgtagatctggaggccatggatatttcgatcactttaattttatcatatatttttgtaggca 28235763  T
Q  207 tta 209  Q
    |||    
T  28235764 tta 28235766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 9 - 209
Target Start/End: Complemental strand, 7887036 - 7886837
Alignment:
Q  9 tgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaa 108  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |  | |||||||||||  | ||||  | |||||||| | ||||||||||| |||    
T  7887036 tgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtacaacattgtttgattttccgtcttcttgcggtgtttgtctgattcatattaaaa 7886937  T
Q  109 gatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatt 208  Q
    ||||||||||||||||||||||||  || | ||||||||||||||||||| |||| |||||||||||||| || ||||||||||| ||||||||||||||    
T  7886936 gatcgattattcaatcaaagattttggcattaacgttgcagatccggaggtcatggatattccggtcactatagttttatcatat-tttttgtaggcatt 7886838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 11 - 151
Target Start/End: Original strand, 30371709 - 30371849
Alignment:
Q  11 atttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaaga 110  Q
    |||||||||||||||||||||| ||||||||||||| | |||||||||||||||||||||| |||||| || ||||||| |||| |||||||||||||||    
T  30371709 atttcatcatctaagtgtggtgatttgttgttcgtcatcttgtgcggcgttgtttgatttcccatcttcgtgcggtgttcatttaattcatattgaaaga 30371808  T
Q  111 tcgattattcaatcaaagatttgagcgtcaacgttgcagat 151  Q
    |||||| ||||||||||||||||  ||||||| ||||||||    
T  30371809 tcgattgttcaatcaaagatttggacgtcaacattgcagat 30371849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 7 - 162
Target Start/End: Complemental strand, 36344590 - 36344436
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||  | | ||  | ||||||| ||||||||||||||||    
T  36344590 tgtgattt-atcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtttttttgcggtgttcatttgattcatattga 36344492  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccat 162  Q
    |||||  ||| |||||||||||| ||| |||| ||| |||||||||||||||||||    
T  36344491 aagattaatttttcaatcaaagagttgggcgtgaacattgcagatccggaggccat 36344436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 17 - 209
Target Start/End: Complemental strand, 7613148 - 7612956
Alignment:
Q  17 tcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgatt 116  Q
    |||||| ||||||||||| ||||||||||||| ||||||   ||||||||||||||| ||||  | ||||||| ||||||||||||||||||||||||||    
T  7613148 tcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcaatgttgtttgatttctcgtcttgttgcggtgttcatttgattcatattgaaagatcgatt 7613049  T
Q  117 attcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaata-ttccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    |||||||  |||||| | | |||||| ||||||||||| ||| ||||| || ||  || ||  |||||||||||||||||||||||||||||||    
T  7613048 attcaatttaagattggggtgtcaacattgcagatccgaagg-catgagtatttttggccaagttaattttatcatatatttttgtaggcatta 7612956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 20257719 - 20257594
Alignment:
Q  83 cggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaa 182  Q
    ||||||| |||||||||||||||||  |||||||||||||||||||||||| |||||||||||| |||||||||   | ||  |||||||||||||||||    
T  20257719 cggtgttcatttgattcatattgaagtatcgattattcaatcaaagatttgcgcgtcaacgttgtagatccgga-aacgtgggtattccggtcactttaa 20257621  T
Q  183 ttttatcatatatttttgtaggcatta 209  Q
    |||||||||||||||||||||||||||    
T  20257620 ttttatcatatatttttgtaggcatta 20257594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 7 - 209
Target Start/End: Original strand, 15570889 - 15571088
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    ||||||||| ||| |  ||||||||||| ||||||||||||| || ||||| ||||||||||| | ||| ||  |  |||||| ||||||||||||||||    
T  15570889 tgtgatttcgtcacccgagtgtggtggtgtgttgttcgtcgtcttatgcggtgttgtttgattcc-catattgttgtggtgttcatttgattcatattga 15570987  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    | |||| |||||||||||||| | |||  ||| ||||||||| |||||||| | |||  |||||| ||||||||||||||||||||||||||||||||||    
T  15570988 a-gatctattattcaatcaaataattggacgttaacgttgcacatccggagtc-atgtgtattccagtcactttaattttatcatatatttttgtaggca 15571085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 91 - 209
Target Start/End: Original strand, 11768065 - 11768180
Alignment:
Q  91 atttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatca 190  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||| ||||  ||||  |||||||||||||||||||    
T  11768065 atttaattcatattgaaagatcgattattcaatcaaagatttgagcgtcaatgttgcaaatctggagg-catg--tattatggtcactttaattttatca 11768161  T
Q  191 tatatttttgtaggcatta 209  Q
    ||||||||||||| |||||    
T  11768162 tatatttttgtagccatta 11768180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 7 - 148
Target Start/End: Complemental strand, 27576450 - 27576309
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    ||||||||| |||| | ||||||||||| |||||||| ||   ||||||| |||||||||||||| | ||||  | ||||||| ||||  || |||||||    
T  27576450 tgtgatttcgtcatatgagtgtggtggtatgttgttcttctacttgtgcgacgttgtttgatttcccgtcttgttgcggtgttcatttattttatattga 27576351  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgca 148  Q
    ||||||||||||||||||||||||||| || |||||||||||    
T  27576350 aagatcgattattcaatcaaagatttgggcatcaacgttgca 27576309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 22978947 - 22978822
Alignment:
Q  83 cggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaa 182  Q
    ||||||| ||||||||||||||||||||   |||||| ||||||||||||| |||||||| |||||||| | |||| ||||  |||| |||||||||| |    
T  22978947 cggtgttcatttgattcatattgaaagaaaaattattaaatcaaagatttgggcgtcaacattgcagattctgagg-catgggtatttcggtcactttca 22978849  T
Q  183 ttttatcatatatttttgtaggcatta 209  Q
    |||||| | |||||||||||| |||||    
T  22978848 ttttataaaatatttttgtagccatta 22978822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 135 - 209
Target Start/End: Original strand, 30298951 - 30299025
Alignment:
Q  135 gcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    |||||||| ||||||||| ||| |||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  30298951 gcgtcaacattgcagatctggatgccatggatattctggtcactttaattttatcatatatttttgtaggcatta 30299025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 36 - 193
Target Start/End: Complemental strand, 19100708 - 19100552
Alignment:
Q  36 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgag 135  Q
    |||| ||||| || ||||||| ||||||| | |||||  |||| |||||||||| ||||||||| ||||||||||  | |||||||||||| |||||||     
T  19100708 tgttattcgttgtcttgtgcgacgttgttcggtttcttgtcttggtacggtgttcatttgattcctattgaaagagtggttattcaatcaatgatttgaa 19100609  T
Q  136 cgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatat 193  Q
    | |||||||| ||||| |  | | ||||| |||||| |||||||||||||||||||||    
T  19100608 catcaacgttccagat-cttaagacatgagtattccagtcactttaattttatcatat 19100552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 192
Target Start/End: Original strand, 6445951 - 6446036
Alignment:
Q  106 aaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcata 192  Q
    ||||||||||||||||||||||| |||   |||||||||||||| | || || | ||| ||||||||||||||||||||||||||||    
T  6445951 aaagatcgattattcaatcaaaggtttagacgtcaacgttgcagtttcgaagac-atggatattccggtcactttaattttatcata 6446036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 91 - 188
Target Start/End: Original strand, 42432962 - 42433058
Alignment:
Q  91 atttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtca-ctttaattttat 188  Q
    ||||||||| ||||||| |||| ||||||||||||| |||  || |||||||||||||||||| || |||||||||||| |||||| ||||||||||||    
T  42432962 atttgattcttattgaa-gatcaattattcaatcaatgatccgaacgtcaacgttgcagatcc-gaagccatgaatatttcggtcatctttaattttat 42433058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 111
Target Start/End: Original strand, 17687361 - 17687409
Alignment:
Q  63 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  17687361 tttgatttcccatcttagtacggtgtttatttgattcagattgaaagat 17687409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 44 - 157
Target Start/End: Original strand, 28097169 - 28097279
Alignment:
Q  44 gtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacg 143  Q
    ||||| |||||||| ||||||||||||||| ||||  || |||||| ||||| ||||  |||||||||||    ||||||||| ||||||| |||||||     
T  28097169 gtcgttttgtgcggtgttgtttgatttctcgtcttcctatggtgttcatttggttcacgttgaaagatcg---gttcaatcaatgatttgaacgtcaaca 28097265  T
Q  144 ttgcagatccggag 157  Q
    | ||||||||||||    
T  28097266 tagcagatccggag 28097279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 149
Target Start/End: Complemental strand, 41214714 - 41214622
Alignment:
Q  59 gttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcga--ttattcaatcaaagatttgagcgtcaacgttgcag 149  Q
    ||||||||||||| | ||||| | | |||||| ||||||| |||||||||||||    ||| |||||||||||||||| ||||||||||||||    
T  41214714 gttgtttgatttcgcgtcttatttccgtgtttctttgatttatattgaaagatcagctttaatcaatcaaagatttgaacgtcaacgttgcag 41214622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 208
Target Start/End: Original strand, 6216978 - 6217067
Alignment:
Q  117 attcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatt 208  Q
    |||||||||| |||||| ||||||||||||||||| |||| | ||||  |||| |||| |||| ||||||||||||| | ||||||||||||    
T  6216978 attcaatcaatgatttgggcgtcaacgttgcagattcggaag-catgtgtatttcggtgacttaaattttatcatat-tatttgtaggcatt 6217067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 111
Target Start/End: Complemental strand, 10332651 - 10332576
Alignment:
Q  36 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||| ||||| ||||||||| |||||||||||| | ||||  | | |||||| ||||||||||||||||||||    
T  10332651 tgttgtttgtcgtcttgtgcggcattgtttgatttcgcgtcttgttgcagtgtttgtttgattcatattgaaagat 10332576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 201
Target Start/End: Complemental strand, 41418690 - 41418628
Alignment:
Q  138 tcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgt 201  Q
    ||||| ||| |||||||||| | ||| |||||||| ||||||||||||||||||||||||||||    
T  41418690 tcaacattgtagatccggagac-atggatattccgctcactttaattttatcatatatttttgt 41418628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 6012267 - 6012213
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgtt 61  Q
    |||||||||||| |||||||| |||| | ||||||||||||| ||||||||||||    
T  6012267 tgtgatttcatcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcggcgtt 6012213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 61 - 111
Target Start/End: Complemental strand, 17096208 - 17096158
Alignment:
Q  61 tgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||||||| | ||||||||||||||||||||||||||  |||||||||    
T  17096208 tgtttgatttcccgtcttagtacggtgtttatttgattcaggttgaaagat 17096158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 156
Target Start/End: Original strand, 13468612 - 13468727
Alignment:
Q  38 ttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcg 137  Q
    |||||| |||| ||||| | ||||| |||||||||  ||||  | ||||||| ||||| ||| |||   ||||||| |||||||||||| |||| ||| |    
T  13468612 ttgttcatcgtcttgtgtgacgttgcttgatttctagtcttgtttcggtgttcatttggttcttat---aagatcggttattcaatcaatgattcgagtg 13468708  T
Q  138 tcaacgttgcagatccgga 156  Q
    |||||||||||||| ||||    
T  13468709 tcaacgttgcagattcgga 13468727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 76
Target Start/End: Original strand, 14211208 - 14211248
Alignment:
Q  36 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatc 76  Q
    ||||||||||||| |||||||||||||||||||||| ||||    
T  14211208 tgttgttcgtcgtcttgtgcggcgttgtttgatttcgcatc 14211248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 76
Target Start/End: Complemental strand, 28541013 - 28540973
Alignment:
Q  36 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatc 76  Q
    ||||||||||||| |||||||||||||||||||||| ||||    
T  28541013 tgttgttcgtcgtcttgtgcggcgttgtttgatttcgcatc 28540973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 156
Target Start/End: Complemental strand, 35921004 - 35920965
Alignment:
Q  117 attcaatcaaagatttgagcgtcaacgttgcagatccgga 156  Q
    |||||||||| ||||||| |||||||||||||||||||||    
T  35921004 attcaatcaatgatttgaacgtcaacgttgcagatccgga 35920965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 189
Target Start/End: Original strand, 11192425 - 11192530
Alignment:
Q  83 cggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaa 182  Q
    |||||| | |||| |||||||||||||| |  ||||||||| || |||||| | |||||||||| |||||||||   ||||| |||| || |||||||||    
T  11192425 cggtgtctgtttggttcatattgaaagaccagttattcaataaatgatttgggtgtcaacgttgtagatccgga-aacatgagtatttcgatcactttaa 11192523  T
Q  183 ttttatc 189  Q
     ||||||    
T  11192524 atttatc 11192530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 14082502 - 14082448
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgtt 61  Q
    |||||||||||| ||||||||||| | | ||||||||||||| |||| |||||||    
T  14082502 tgtgatttcatcgtctaagtgtggcgttgtgttgttcgtcgtcttgtacggcgtt 14082448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 171
Target Start/End: Complemental strand, 42432103 - 42432019
Alignment:
Q  85 gtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattcc 171  Q
    ||||| ||||||||| || | ||||||  |||||| |||||| ||| | | ||||||||||||||||||||| ||||||||||||||    
T  42432103 gtgttcatttgattcctact-aaagattaattatttaatcaatgatctaaacgtcaacgttgcagatccgga-gccatgaatattcc 42432019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 100
Target Start/End: Original strand, 23428408 - 23428445
Alignment:
Q  63 tttgatttctcatcttagtacggtgtttatttgattca 100  Q
    ||||||||||| ||||||| ||||||||||||||||||    
T  23428408 tttgatttctcgtcttagtgcggtgtttatttgattca 23428445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 153
Target Start/End: Complemental strand, 2979314 - 2979278
Alignment:
Q  117 attcaatcaaagatttgagcgtcaacgttgcagatcc 153  Q
    |||||||||| |||||| |||||||||||||||||||    
T  2979314 attcaatcaatgatttgggcgtcaacgttgcagatcc 2979278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 111
Target Start/End: Complemental strand, 7771786 - 7771738
Alignment:
Q  63 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||||  ||||||||| ||||||||||||||||||  |||||||||    
T  7771786 tttgattttccatcttagtgcggtgtttatttgattcaagttgaaagat 7771738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 111
Target Start/End: Complemental strand, 11734784 - 11734736
Alignment:
Q  63 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||||| | ||||||| || ||||||||||||||| ||||||||||    
T  11734784 tttgatttcccgtcttagtgcgatgtttatttgattcagattgaaagat 11734736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 11767799 - 11767851
Alignment:
Q  18 catctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgattt 70  Q
    ||||| ||||||||||| ||||||||||||| |||| ||  ||||||||||||    
T  11767799 catctgagtgtggtggtgtgttgttcgtcgtcttgtacgaagttgtttgattt 11767851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 111
Target Start/End: Original strand, 14535058 - 14535102
Alignment:
Q  67 atttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||||||||| | |||||||||||||||||  ||||||||||    
T  14535058 atttctcatcttaatgcggtgtttatttgattcggattgaaagat 14535102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 193
Target Start/End: Original strand, 15571566 - 15571641
Alignment:
Q  117 attcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatat 193  Q
    |||||||||| |||||| | |||||||||||||||||||| | ||||| || | | || |||| |||||||||||||    
T  15571566 attcaatcaatgatttgggtgtcaacgttgcagatccggaag-catgagtagttcagtgacttaaattttatcatat 15571641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 111
Target Start/End: Original strand, 17331484 - 17331532
Alignment:
Q  63 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||||| | ||||||| ||||||||||||||||||  |||||||||    
T  17331484 tttgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagat 17331532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 111
Target Start/End: Complemental strand, 17732347 - 17732303
Alignment:
Q  67 atttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||| ||||||||| ||||||||||||||||||  |||||||||    
T  17732347 atttcccatcttagtgcggtgtttatttgattcaagttgaaagat 17732303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 76
Target Start/End: Complemental strand, 19103574 - 19103534
Alignment:
Q  36 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatc 76  Q
    ||||||| ||||| |||||||||||||||||||||| ||||    
T  19103574 tgttgttagtcgtcttgtgcggcgttgtttgatttcacatc 19103534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 111
Target Start/End: Original strand, 20483342 - 20483390
Alignment:
Q  63 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||||| | |||||||||||||||||||||| |||  |||||||||    
T  20483342 tttgatttcccgtcttagtacggtgtttatttgactcaagttgaaagat 20483390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 153
Target Start/End: Complemental strand, 28540914 - 28540878
Alignment:
Q  117 attcaatcaaagatttgagcgtcaacgttgcagatcc 153  Q
    |||||||||| |||||| |||||||||||||||||||    
T  28540914 attcaatcaatgatttgggcgtcaacgttgcagatcc 28540878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 111
Target Start/End: Complemental strand, 32347679 - 32347631
Alignment:
Q  63 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||||| | |||||||||||||||||||| |||||  |||||||||    
T  32347679 tttgatttcccgtcttagtacggtgtttatttaattcaagttgaaagat 32347631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 111
Target Start/End: Complemental strand, 33164433 - 33164385
Alignment:
Q  63 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||||| | ||||||| ||||||||||||||||||  |||||||||    
T  33164433 tttgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagat 33164385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 111
Target Start/End: Original strand, 42609300 - 42609348
Alignment:
Q  63 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||||| | |||||||| | |||||||||||||||| |||||||||    
T  42609300 tttgatttcacgtcttagtatgatgtttatttgattcatgttgaaagat 42609348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 159; Significance: 8e-85; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 7 - 209
Target Start/End: Original strand, 25162410 - 25162612
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||| || ||||||| ||||| ||||||||||    
T  25162410 tgtgatttcatcatctaagtgtggtagtttgttgttcgtcgtcttgtgcggcgttgtttgatttcccatcttcgtgcggtgttcatttgtttcatattga 25162509  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||    
T  25162510 aagatcgattattcaatcaaagatttgaccgtcaacgttgcagatccggaggtaatggatattccggtcactttaattttatcatatatttttgtaggca 25162609  T
Q  207 tta 209  Q
    |||    
T  25162610 tta 25162612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 39917503 - 39917296
Alignment:
Q  1 tttccgtgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattca 100  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| || |||| || ||||||||||||| || |||| || ||||||| ||||||||||    
T  39917503 tttccttgtgatttcatcatctaagtgtggtggtttgttgttcgttgtcttgtacgacgttgtttgattt-tcgtcttcgtgcggtgttcatttgattca 39917405  T
Q  101 tattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttg 200  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||    
T  39917404 tattgaaagatcgattattcaatcaaagatttgaccgtcaacgttgcagatccggaggtcatggatattccagtcactttaattttatcatatatttttg 39917305  T
Q  201 taggcatta 209  Q
    |||||||||    
T  39917304 taggcatta 39917296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 7 - 209
Target Start/End: Complemental strand, 25631626 - 25631424
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||||||||||||||||||||||||||  ||| |||||||||||||||| ||||| | |||| || ||||||| |||||||| |||||||    
T  25631626 tgtgatttcatcatctaagtgtggtggtttgttgttctccgtcttgtgcggcgttgtttcatttcccgtcttcgtgcggtgttcatttgatttatattga 25631527  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  25631526 aagatcgattattcaatcaaagatttgggcgtcaacgttgtagatccggatgccatggatattccggtcactttaattttatcatatatttttgtaggca 25631427  T
Q  207 tta 209  Q
    |||    
T  25631426 tta 25631424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 7 - 209
Target Start/End: Complemental strand, 49552324 - 49552122
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| | ||  | ||||||| |||| ||||| |||||    
T  49552324 tgtgatttcatcatctaaatgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttctcgttttcttgcggtgttcattttattcacattga 49552225  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||||||    
T  49552224 aagatcgattattcaatcaaagatttgagcatcaacgttgcagatccggaggccatggatattccggtgactttagttttatcatatatttttgtaggca 49552125  T
Q  207 tta 209  Q
    |||    
T  49552124 tta 49552122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 7 - 209
Target Start/End: Complemental strand, 51202354 - 51202152
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| |||| | || ||||||| ||||||||||||||||    
T  51202354 tgtgatttcatcatctaagtgtggtggtttgttgtttgtcgtcttgtgcggcgttgtttgatttcccatcgtcgtgcggtgttcatttgattcatattga 51202255  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    ||||||  | ||||||||||||||||| |||||||||||||| |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  51202254 aagatcagtaattcaatcaaagatttgggcgtcaacgttgcaaatccggaggcgatgaatatcccggtcactttaattttatcatatatttttgtaggca 51202155  T
Q  207 tta 209  Q
    |||    
T  51202154 tta 51202152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 7 - 209
Target Start/End: Original strand, 29503436 - 29503637
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||  | ||||  | ||||||| || |||||||| ||||    
T  29503436 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgctgtttgattttccgtcttcttgcggtgttcatctgattcattttga 29503535  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  29503536 a-gatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggaggccatggatattccggtcactttaattttatcatatatttttgtaggca 29503634  T
Q  207 tta 209  Q
    |||    
T  29503635 tta 29503637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 11 - 209
Target Start/End: Original strand, 32607447 - 32607645
Alignment:
Q  11 atttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaaga 110  Q
    |||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||| | |||| || ||||||| ||||||||||||||||||||    
T  32607447 atttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgtggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaaga 32607546  T
Q  111 tcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    | |||| |||||||||||||||| ||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||    
T  32607547 ttgattgttcaatcaaagatttgggcgtcaacgttgcagatccggaggcaatgaatattccgatcactttaatttcatcatatatttttgtaggcatta 32607645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 7 - 209
Target Start/End: Original strand, 42719491 - 42719693
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  | |||| || ||||||| ||||||||||||||||    
T  42719491 tgtgagttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattga 42719590  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    ||||||||||||||||||||||||| |   ||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  42719591 aagatcgattattcaatcaaagattcggaggtcaacgttgcagattcggaggtcgtgaatattccggtcactttaattttatcatatatttttgtaggca 42719690  T
Q  207 tta 209  Q
    |||    
T  42719691 tta 42719693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 9 - 207
Target Start/End: Original strand, 46934618 - 46934816
Alignment:
Q  9 tgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaa 108  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| | ||||  | ||||||| ||||||||||||||||||    
T  46934618 tgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttcttgcggtgttcatttgattcatattgaaa 46934717  T
Q  109 gatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcat 207  Q
    |||||||||||||||||| |||||| |||||||| ||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||    
T  46934718 gatcgattattcaatcaacgatttgggcgtcaacattgcagatccggagttcatggatattccggtcactttaattttatcatatatttttgtaggcat 46934816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 6 - 209
Target Start/End: Complemental strand, 3849020 - 3848817
Alignment:
Q  6 gtgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattg 105  Q
    ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||  | ||||||| |||| |||| |||||    
T  3849020 gtgtgatttcatcatgtaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgctttcccatcttcttgcggtgttcattttattcctattg 3848921  T
Q  106 aaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggc 205  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||  |||||||||| |||||||||||||||||||| |||||||||    
T  3848920 aaagatcgattattcaatcaaagatttggacgtcaacgttgcagatccggaggccatagatattccggtgactttaattttatcatatatatttgtaggc 3848821  T
Q  206 atta 209  Q
    ||||    
T  3848820 atta 3848817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 7 - 209
Target Start/End: Original strand, 4178539 - 4178741
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    ||||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||| ||||| | |||| || ||||||| |||||||| |||||||    
T  4178539 tgtgatttcatcatctaagtgtggtggtttgtttttcatcgtcttgtgcggcgttgtttcatttcccgtcttcgtgcggtgttcatttgatttatattga 4178638  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    |||||| ||||||||| |||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  4178639 aagatccattattcaaacaaagatttgggcgtcaacattgcagatccggaggccatggatattccggtcactttaattttatcatatatttttctaggca 4178738  T
Q  207 tta 209  Q
    |||    
T  4178739 tta 4178741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 7 - 209
Target Start/End: Original strand, 17237779 - 17237981
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||  | || |  ||||||| |||||||||||||| |    
T  17237779 tgtgatttcatcatctaagtgtggtggtttgttgtttgtcgtcttgtgcggcgttgtttgatatcttgttttcgcgcggtgttgatttgattcatattaa 17237878  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    || |||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||    
T  17237879 aatatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggaggctatggatattccggtcactttaattttattatatatttttgtaggca 17237978  T
Q  207 tta 209  Q
    |||    
T  17237979 tta 17237981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 7 - 206
Target Start/End: Complemental strand, 30648819 - 30648620
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||| ||||||  | ||||||| |||| |||||||||||    
T  30648819 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgctttcccatcttcttgcggtgttcattttattcatattga 30648720  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    |||||||||||||||||||||||||||  ||||||||||||| |||||| ||||||||||||| |||| |||||||||||||||||||||||| ||||||    
T  30648719 aagatcgattattcaatcaaagatttggacgtcaacgttgcaaatccggcggccatgaatatttcggtaactttaattttatcatatatttttataggca 30648620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 11 - 209
Target Start/End: Complemental strand, 44907494 - 44907297
Alignment:
Q  11 atttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaaga 110  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||  ||||| || ||||||| |||| |||||||||||||||    
T  44907494 atttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcg-cgttgtttgatttcctatcttcgtgcggtgttcatttaattcatattgaaaga 44907396  T
Q  111 tcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    |||||| |||||||||| ||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||    
T  44907395 tcgattgttcaatcaaatatttgggcgtcaacgttgcagatccggaggcaacgaatattccggtcactttaatttcatcatatatttttgtaggcatta 44907297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 11 - 209
Target Start/End: Original strand, 12116075 - 12116274
Alignment:
Q  11 atttcatcatctaagtgtggtggttt-gttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaag 109  Q
    ||||||| |||||||||||||| ||| ||||||||| || |||||||||||||||||||||| | |||| || ||||||| |||||||||||||||||||    
T  12116075 atttcattatctaagtgtggtgattttgttgttcgttgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaag 12116174  T
Q  110 atcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||||  ||||||||||||| |||||||||||||||||||||||    
T  12116175 atcgattgttcaatcaaagatttgagcgtcaacgttgcagatccggaggcaatggatattctagtcactttaatttcatcatatatttttgtaggcatta 12116274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 7 - 209
Target Start/End: Original strand, 14464484 - 14464686
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||| ||||||||||||| |||||  ||| |||| | |||||||||||||| ||||| | |||| || ||||||| ||||||||||||||||    
T  14464484 tgtgatttcatcttctaagtgtggtgatttgtcattcatcgtttcgtgcggcgttgtttaatttcccgtcttcgtgcggtgttcatttgattcatattga 14464583  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| || |||| |||||||||||||| |||||||||||||||||||    
T  14464584 aagatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggaggcaatggatgttccagtcactttaattttgtcatatatttttgtaggca 14464683  T
Q  207 tta 209  Q
    |||    
T  14464684 tta 14464686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 11 - 209
Target Start/End: Original strand, 36906100 - 36906298
Alignment:
Q  11 atttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaaga 110  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| | |||| ||   ||||| ||||||||||||||||||||    
T  36906100 atttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgtagtgttcatttgattcatattgaaaga 36906199  T
Q  111 tcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    || ||| |||||||||||||||| ||||||||||||||| ||||||||| ||  ||||||| ||||||||||||| |||||||||||||||||||||||    
T  36906200 tcaattgttcaatcaaagatttgggcgtcaacgttgcagttccggaggcaatagatattccagtcactttaatttcatcatatatttttgtaggcatta 36906298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 11 - 201
Target Start/End: Complemental strand, 35499294 - 35499104
Alignment:
Q  11 atttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaaga 110  Q
    ||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||| | |||| || ||||||| ||||||||||||||||||||    
T  35499294 atttcattatctaagtgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtctttgtgcggtgttcatttgattcatattgaaaga 35499195  T
Q  111 tcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgt 201  Q
    |||||| |||||||||||||||| |||| ||| ||||| |||||||| | ||| |||||||| |||||||||||| |||||||||||||||    
T  35499194 tcgattgttcaatcaaagatttgggcgttaacattgcaaatccggagacaatggatattccgatcactttaatttcatcatatatttttgt 35499104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 7 - 209
Target Start/End: Complemental strand, 38855136 - 38854934
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    ||||||||||||||||||||||| ||||||||||||||| || ||||| |||||||||| || || | || | || ||||||| |||||||| |||||||    
T  38855136 tgtgatttcatcatctaagtgtgatggtttgttgttcgttgtcttgtgtggcgttgtttcatctcccgtcctcgtgcggtgttcatttgatttatattga 38855037  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    |||||||||||||||||| || ||||| |||||||||||||| |||||||||||||  ||||||||| ||||||||||||||||||||||||||||| ||    
T  38855036 aagatcgattattcaatcgaatatttgggcgtcaacgttgcaaatccggaggccattgatattccgggcactttaattttatcatatatttttgtagtca 38854937  T
Q  207 tta 209  Q
    |||    
T  38854936 tta 38854934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 7 - 209
Target Start/End: Complemental strand, 50611517 - 50611316
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    ||||||||||||||||||||||| |||||| ||||||||||| || |||||||| |||| ||||  | || | || ||||||| |||||||| |||||||    
T  50611517 tgtgatttcatcatctaagtgtgatggtttattgttcgtcgtcttatgcggcgt-gtttcattttccgtcctcgtgcggtgttcatttgatttatattga 50611419  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||||| ||||||||||||    
T  50611418 aagatcgattattcaatcgaagatttgggcgtcaacgttgcagatccggaggccatggatattcgggtcacttaaattttatcatatgtttttgtaggca 50611319  T
Q  207 tta 209  Q
    |||    
T  50611318 tta 50611316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 8 - 209
Target Start/End: Complemental strand, 36734791 - 36734591
Alignment:
Q  8 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaa 107  Q
    |||||||| ||||| || |||| |||| ||||||||||||| |||||||||||||||||||||  | ||||| | ||||||| |||||||||||| ||||    
T  36734791 gtgatttcgtcatccaaatgtgatggtgtgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttattgcggtgttcatttgattcataatgaa 36734692  T
Q  108 agatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcat 207  Q
    |||||||||||| ||||||||||||| |||||||||||||||||| ||||| ||||| |||| |||| ||||||||||||||||||||||||||||||||    
T  36734691 agatcgattattgaatcaaagatttgggcgtcaacgttgcagatctggagg-catgagtatttcggttactttaattttatcatatatttttgtaggcat 36734593  T
Q  208 ta 209  Q
    ||    
T  36734592 ta 36734591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 20 - 209
Target Start/End: Original strand, 21488078 - 21488269
Alignment:
Q  20 tctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattatt 119  Q
    ||||||||||||||| ||||||| ||||| |||||||||||||||||||||| | ||||  | |||||||||||||||||||||||||| ||||||||||    
T  21488078 tctaagtgtggtggtatgttgtttgtcgtcttgtgcggcgttgtttgatttcccgtcttcttgcggtgtttatttgattcatattgaaaaatcgattatt 21488177  T
Q  120 caatcaaagatttgagcgtcaacgttgcagatccggag--gccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    |||||||||||||| |||||||||||| ||||| ||||  | |||||  ||||  |||||||||||||||||||||||||||||||||||||    
T  21488178 caatcaaagatttgggcgtcaacgttgtagatctggaggaggcatgagcattctagtcactttaattttatcatatatttttgtaggcatta 21488269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 8 - 207
Target Start/End: Original strand, 31794046 - 31794244
Alignment:
Q  8 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaa 107  Q
    |||||||  |||||| ||||| ||||| ||||||||||||| |||||||||||||||||||||   |||||  | ||||||| |||||||||||||||||    
T  31794046 gtgattttgtcatctgagtgtagtggtgtgttgttcgtcgttttgtgcggcgttgtttgattttctatcttgttgcggtgttcatttgattcatattgaa 31794145  T
Q  108 agatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcat 207  Q
    |||||||||||||||||||||||||| || |||||||||||||| |||||| ||||| ||||||||||| ||||||||||||||||| | ||||||||||    
T  31794146 agatcgattattcaatcaaagatttgggcatcaacgttgcagattcggagg-catgagtattccggtcagtttaattttatcatatactgttgtaggcat 31794244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 7 - 209
Target Start/End: Original strand, 22802996 - 22803206
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||| |||| |||| | ||||||| ||||||||||||||||| || ||||||||||||||||||||| | |   | ||||||| ||||||||||||||||    
T  22802996 tgtgctttcgtcatttgagtgtggcggtttgttgttcgtcgtcttatgcggcgttgtttgatttctcgtatcgttgcggtgttcatttgattcatattga 22803095  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggc--------catgaatattccggtcactttaattttatcatatatttt 198  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||        ||||  ||||||| |||||||||||||||||| ||||||    
T  22803096 aagatcaattattcaatcaaagatttgagcgtcaacgttgcagatccggaggcatggaagacatgggtattccgatcactttaattttatcatgtatttt 22803195  T
Q  199 tgtaggcatta 209  Q
    |||||||||||    
T  22803196 tgtaggcatta 22803206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 38440676 - 38440496
Alignment:
Q  9 tgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaa 108  Q
    ||||||||| ||| |||||||||||||||||||||||||| || |  ||||||   |||||| || |||| || |  |||| ||||||||||||||||||    
T  38440676 tgatttcatgatcaaagtgtggtggtttgttgttcgtcgtcttatatggcgtt---tgatttttcgtcttcgtgcaatgttcatttgattcatattgaaa 38440580  T
Q  109 gatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcata 192  Q
    ||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||| ||||||||||||| |||||    
T  38440579 gatcgattattcaatcaaagatttgggcgtcaacattgcagatctggaggccatgaatattccgatcactttaattttgtcata 38440496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 92 - 233
Target Start/End: Original strand, 2342522 - 2342666
Alignment:
Q  92 tttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcat 191  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| || ||||||  ||| |||||||||||||||||||||||||||    
T  2342522 tttgattcatattgaaatatcgattattcaatcaaagatttgggcgtcaacgttgcaaattcggaggatatggatattccggtcactttaattttatcat 2342621  T
Q  192 atatttttgtaggc---attaacttggatactgtgattttcttcg 233  Q
    ||||||||||||||   |||||||||||| |||||| ||| ||||    
T  2342622 atatttttgtaggcattattaacttggatgctgtgagtttgttcg 2342666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 44 - 209
Target Start/End: Original strand, 25849821 - 25849985
Alignment:
Q  44 gtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacg 143  Q
    ||||| |||||| ||||||||| ||||| | ||||  | ||||||| |||||||||||||||||| |||||||||||||| |||||||| ||||||||||    
T  25849821 gtcgtcttgtgcagcgttgttttatttcccgtcttcttgcggtgttcatttgattcatattgaaaaatcgattattcaattaaagattttagcgtcaacg 25849920  T
Q  144 ttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    ||||||||||||| | |||||||||||| |||||||||| |||||  |||||||||||| ||||||    
T  25849921 ttgcagatccgga-gacatgaatattccagtcactttaactttattgtatatttttgtaagcatta 25849985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 85 - 209
Target Start/End: Original strand, 46178621 - 46178744
Alignment:
Q  85 gtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaatt 184  Q
    ||||| |||||||||||||||||| || ||||||||||||||||| ||| |||||||||||||||||||||||| ||||  ||||||||||||||| |||    
T  46178621 gtgttcatttgattcatattgaaatattgattattcaatcaaagaattgggcgtcaacgttgcagatccggagg-catgggtattccggtcacttttatt 46178719  T
Q  185 ttatcatatatttttgtaggcatta 209  Q
    |||||||||||||||||| ||||||    
T  46178720 ttatcatatatttttgtaagcatta 46178744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 8 - 197
Target Start/End: Complemental strand, 6910802 - 6910622
Alignment:
Q  8 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaa 107  Q
    ||||||||||||||||||||||||||| | || |||||||| |||||||  ||||||||||||  | |  |      ||||| |||||||||||||||||    
T  6910802 gtgatttcatcatctaagtgtggtggtatattattcgtcgttttgtgcgatgttgtttgattttccgttat------gtgttcatttgattcatattgaa 6910709  T
Q  108 agatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatattt 197  Q
    |||||||||||||||||| ||||||||||||||| |||| ||||  ||| | ||||  |||||| |||| ||||||||||||||||||||    
T  6910708 agatcgattattcaatcatagatttgagcgtcaatgttgtagatatgga-gacatg--tattccagtcaatttaattttatcatatattt 6910622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 114 - 203
Target Start/End: Original strand, 21916555 - 21916643
Alignment:
Q  114 attattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtag 203  Q
    |||||||||||||| ||||||||||||||||||||||||||||  ||||| ||||| |||||||||||||||||||||||||||||||||    
T  21916555 attattcaatcaaa-atttgagcgtcaacgttgcagatccggaaaccatggatatttcggtcactttaattttatcatatatttttgtag 21916643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 24 - 209
Target Start/End: Original strand, 37169222 - 37169405
Alignment:
Q  24 agtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaat 123  Q
    |||||| |||| |||||| |||||| |||||| ||||||||||||||  | | ||  | ||||| | ||||||||||||| ||| |||| ||||||||||    
T  37169222 agtgtgatggtctgttgtccgtcgtcttgtgcagcgttgtttgattttccgtattgttgcggtgctcatttgattcatatcgaa-gatcaattattcaat 37169320  T
Q  124 caaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
     ||||| ||   ||||||||||||||||||||||   |||  ||||||  ||| |||||||| |||||||||||||||||||||||    
T  37169321 taaagaattagacgtcaacgttgcagatccggagat-atgtgtattccaatcattttaatttgatcatatatttttgtaggcatta 37169405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 4172541 - 4172605
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttc 71  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||| |||||    
T  4172541 tgtgatttcatcatctaagtgtggtggtttgtttttcgtcgtcttgtgcggtgttgtttcatttc 4172605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 2342466 - 2342528
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatt 69  Q
    ||||||||||||||||||||||||||||||||| ||||| || | ||||||||||||||||||    
T  2342466 tgtgatttcatcatctaagtgtggtggtttgttattcgttgtctagtgcggcgttgtttgatt 2342528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 108
Target Start/End: Complemental strand, 12947377 - 12947305
Alignment:
Q  36 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaa 108  Q
    ||||||||||||| |||||||||||||||||||||| ||||||  |  ||||||  |||| ||||||||||||    
T  12947377 tgttgttcgtcgtcttgtgcggcgttgtttgatttcgcatcttgttgtggtgttcgtttggttcatattgaaa 12947305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 61 - 111
Target Start/End: Original strand, 39610364 - 39610414
Alignment:
Q  61 tgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||||||||| |||||||||| ||||||||||||| | ||||||||||    
T  39610364 tgtttgatttctcgtcttagtacgttgtttatttgatttagattgaaagat 39610414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 193
Target Start/End: Complemental strand, 30293575 - 30293419
Alignment:
Q  36 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgag 135  Q
    ||||||||||||| ||| |||  ||||||||||||  ||||||  |   || || ||||||||| || |||||||   | ||||||||||| ||||||||    
T  30293575 tgttgttcgtcgtcttgcgcgatgttgtttgattttccatcttgttgtagtattcatttgattcctactgaaagacaaactattcaatcaatgatttgag 30293476  T
Q  136 cgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatat 193  Q
     ||||| |||||| || |||| | ||||| |||| ||||||| |||| ||||||||||    
T  30293475 agtcaatgttgcaaattcggatg-catgagtatttcggtcacattaactttatcatat 30293419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 29249218 - 29249294
Alignment:
Q  36 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatc 112  Q
    |||||||| |||| |||||| ||||| |||||||||  |||||| |  |||||| ||||||||||| ||||||||||    
T  29249218 tgttgttcatcgttttgtgcagcgttctttgatttcgaatcttattgtggtgttcatttgattcatcttgaaagatc 29249294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 111
Target Start/End: Complemental strand, 40013245 - 40013197
Alignment:
Q  63 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||||| ||||||||| ||||||||||||||||||  |||||||||    
T  40013245 tttgatttcccatcttagtgcggtgtttatttgattcaggttgaaagat 40013197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 111
Target Start/End: Complemental strand, 42167982 - 42167938
Alignment:
Q  67 atttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    |||||||||||||||  ||||||||||||||||| ||||||||||    
T  42167982 atttctcatcttagtgtggtgtttatttgattcagattgaaagat 42167938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 111
Target Start/End: Original strand, 45047670 - 45047718
Alignment:
Q  63 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||||||||| ||||| |||||||||||| ||||| ||||||||||    
T  45047670 tttgatttctcattttagtgcggtgtttattttattcagattgaaagat 45047718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 191
Target Start/End: Original strand, 6902959 - 6903049
Alignment:
Q  100 atattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcat 191  Q
    ||||||||||||| | ||||||||||| ||||||| || |||| ||| ||||||  ||| |||||||||| | |||| ||||| ||||||||    
T  6902959 atattgaaagatcaaatattcaatcaatgatttgaacgacaacattgtagatccaaagg-catgaatatttccgtcattttaagtttatcat 6903049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 71
Target Start/End: Original strand, 7546595 - 7546630
Alignment:
Q  36 tgttgttcgtcgtattgtgcggcgttgtttgatttc 71  Q
    ||||||||||||| ||||||||||||||||||||||    
T  7546595 tgttgttcgtcgtcttgtgcggcgttgtttgatttc 7546630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 71
Target Start/End: Original strand, 29239300 - 29239363
Alignment:
Q  8 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttc 71  Q
    ||||||||||| ||| |||| || | | ||||||||||||| |||||||||| |||||||||||    
T  29239300 gtgatttcatcgtctgagtgcggcgttgtgttgttcgtcgtcttgtgcggcgctgtttgatttc 29239363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 71
Target Start/End: Original strand, 51487091 - 51487126
Alignment:
Q  36 tgttgttcgtcgtattgtgcggcgttgtttgatttc 71  Q
    ||||||||||||| ||||||||||||||||||||||    
T  51487091 tgttgttcgtcgtcttgtgcggcgttgtttgatttc 51487126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 20465099 - 20465045
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgtt 61  Q
    |||||||||||| |||||||| |||| | ||||||||||||| |||| |||||||    
T  20465099 tgtgatttcatcgtctaagtgaggtgttgtgttgttcgtcgtcttgtacggcgtt 20465045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 78
Target Start/End: Complemental strand, 27706333 - 27706291
Alignment:
Q  36 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatctt 78  Q
    ||||||||||||| |||||||||||||||| ||||| ||||||    
T  27706333 tgttgttcgtcgtcttgtgcggcgttgtttaatttcgcatctt 27706291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 78
Target Start/End: Original strand, 42460731 - 42460773
Alignment:
Q  36 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatctt 78  Q
    |||||||| |||| |||||||||||||||||||||| ||||||    
T  42460731 tgttgttcatcgtcttgtgcggcgttgtttgatttcacatctt 42460773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 43488719 - 43488665
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgtt 61  Q
    ||||||||| || ||||||||||| | | ||||||||||||| ||||||||||||    
T  43488719 tgtgatttcgtcgtctaagtgtggcgttgtgttgttcgtcgtcttgtgcggcgtt 43488665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 112
Target Start/End: Original strand, 14585618 - 14585667
Alignment:
Q  63 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagatc 112  Q
    ||||||||| | ||||||| ||||||||||||||||||  ||||||||||    
T  14585618 tttgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagatc 14585667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 209
Target Start/End: Original strand, 54149082 - 54149161
Alignment:
Q  128 gatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    |||||| |||||||||||||||||||||| | ||||  |||| |||| ||||  |||||||||||| | |||||||||||||    
T  54149082 gatttgggcgtcaacgttgcagatccggaag-catggctatttcggtgacttggattttatcatat-tatttgtaggcatta 54149161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 111
Target Start/End: Original strand, 3457107 - 3457143
Alignment:
Q  75 tcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||||||||||||||||||||||  |||||||||    
T  3457107 tcttagtacggtgtttatttgattcaagttgaaagat 3457143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 153
Target Start/End: Original strand, 8914792 - 8914828
Alignment:
Q  117 attcaatcaaagatttgagcgtcaacgttgcagatcc 153  Q
    |||||||||| |||||| |||||||||||||||||||    
T  8914792 attcaatcaatgatttgggcgtcaacgttgcagatcc 8914828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 111
Target Start/End: Complemental strand, 36624668 - 36624620
Alignment:
Q  63 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||||| | ||||||| ||||||||||||||||||  |||||||||    
T  36624668 tttgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagat 36624620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 111
Target Start/End: Complemental strand, 49628068 - 49628020
Alignment:
Q  63 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||||| | ||||||| ||||||||||||||||||  |||||||||    
T  49628068 tttgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagat 49628020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 153
Target Start/End: Complemental strand, 51303651 - 51303615
Alignment:
Q  117 attcaatcaaagatttgagcgtcaacgttgcagatcc 153  Q
    |||||||||| |||||| |||||||||||||||||||    
T  51303651 attcaatcaatgatttgggcgtcaacgttgcagatcc 51303615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 111
Target Start/End: Complemental strand, 54706688 - 54706640
Alignment:
Q  63 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||||| | ||||||| ||||||||||||||||||  |||||||||    
T  54706688 tttgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagat 54706640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 155; Significance: 2e-82; HSPs: 84)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 7 - 209
Target Start/End: Complemental strand, 9986442 - 9986240
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  | |||| || ||||||| ||||||||||||||||    
T  9986442 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattga 9986343  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  9986342 aagatcgattattcaattaaagatttgggcgtcaacgttgcagattcggaggccatgggtattccggtcactttaattttatcatatatttttgtaggca 9986243  T
Q  207 tta 209  Q
    |||    
T  9986242 tta 9986240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 7 - 209
Target Start/End: Original strand, 6173613 - 6173815
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    ||||||||||||||| ||||||||||||||||||||||| || ||||| |||||||||||||||  |||||| || ||||||| ||||||||||||||||    
T  6173613 tgtgatttcatcatcgaagtgtggtggtttgttgttcgttgtcttgtgtggcgttgtttgattttccatctttgtgcggtgttcatttgattcatattga 6173712  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  6173713 aagatcgatcattcaatcaaagatttgggcgtcaacgttgcagatccggaggccatggatattccggtgactttaattttatcatatatttttgtaggca 6173812  T
Q  207 tta 209  Q
    |||    
T  6173813 tta 6173815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 7 - 209
Target Start/End: Complemental strand, 20047182 - 20046980
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||   ||||  ||||||||| |||| |||| ||||||    
T  20047182 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttcatgtcttcttacggtgttcattttattcctattga 20047083  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    |||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  20047082 aagatcgattattcaatcaaagatttggacatcaacgttgcagatccggaggccatgaatattccggtgactttaattttatcatatatttttgtaggca 20046983  T
Q  207 tta 209  Q
    |||    
T  20046982 tta 20046980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 7015817 - 7015609
Alignment:
Q  1 tttccgtgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattca 100  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  | |||| || ||||||| ||||||||||    
T  7015817 tttccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattca 7015718  T
Q  101 tattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttg 200  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||||| | |||||| ||||||| ||| ||||||||||||||||||||||||    
T  7015717 tattgaaatatcgattattcaatcaaagatttgggcgtcaacgttgcagatccgaatgccatggatattcccgtcgctttaattttatcatatatttttg 7015618  T
Q  201 taggcatta 209  Q
    |||||||||    
T  7015617 taggcatta 7015609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 11 - 209
Target Start/End: Original strand, 36233993 - 36234191
Alignment:
Q  11 atttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaaga 110  Q
    |||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||| | |||| || ||||||| ||||||||||||||||||||    
T  36233993 atttcatcatctaagtgtggtgattttttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaaga 36234092  T
Q  111 tcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  36234093 tcgattgttcaatcaaagatttgggcgtcaacgttgcagatccggaggcaatggatattccggtcactttaatttcatcatatatttttgtaggcatta 36234191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 7 - 208
Target Start/End: Original strand, 8805847 - 8806048
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||| | |||| ||  |||||| ||||||||||||||||    
T  8805847 tgtgatttcatcatctgagtgtggtggtttgttgttcgtcgtcttgtgcgacgttgtttgatttcccgtcttcgtgtggtgttcatttgattcatattga 8805946  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    ||||||||||||||||||||||||||  ||||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  8805947 aagatcgattattcaatcaaagattttggcgtcaacgttgcagattcggaggtcatggatattccggtcactttaattttatcatatatttttgtaggca 8806046  T
Q  207 tt 208  Q
    ||    
T  8806047 tt 8806048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 7 - 209
Target Start/End: Original strand, 32913222 - 32913423
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||  | ||||  ||||||||| || |||||||||||||    
T  32913222 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgctgtttgattttccgtcttcttacggtgttcatctgattcatattga 32913321  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| |||    
T  32913322 a-gatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggaggccatggatattacggtcactttaattttatcatatatttttgtatgca 32913420  T
Q  207 tta 209  Q
    |||    
T  32913421 tta 32913423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 7 - 209
Target Start/End: Complemental strand, 2808572 - 2808370
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  | | ||  | || |||| || |||||||||||||    
T  2808572 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttgcgatgttcatctgattcatattga 2808473  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||    
T  2808472 aagatcgattattcaatcaaagattttggcgtcaacgttgcagatccggaagccatggatattccgatcactttaattttatcatatatttttgtaggca 2808373  T
Q  207 tta 209  Q
    |||    
T  2808372 tta 2808370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 7 - 209
Target Start/End: Original strand, 3725161 - 3725363
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||| |||||||||||||||||||||||||| || |||| ||||||||||||||||||| |||| ||  ||||||  |||||||||||||||    
T  3725161 tgtgatttcatcgtctaagtgtggtggtttgttgttcgttgtcttgtacggcgttgtttgatttctcgtctttgtgtggtgttcgtttgattcatattga 3725260  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||  |||||||| ||||||||||||| |||||||||||||||||||    
T  3725261 aagatcgattattcaatcaaagatttgagcgtcaacgttgtagatccagaggccatagatattccgatcactttaattttttcatatatttttgtaggca 3725360  T
Q  207 tta 209  Q
    |||    
T  3725361 tta 3725363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 7 - 209
Target Start/End: Complemental strand, 21570507 - 21570306
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||  |||| | ||||    ||||||| ||||||||||||||||    
T  21570507 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgtgacgttgtttagtttcccgtcttctcgcggtgttcatttgattcatattga 21570408  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    | ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  21570407 a-gatcgattattcaatcaaagatttgggcgtcaatgttgcagatccggaggccatgaatattccgttcactttaattttatcatatatttttgtaggca 21570309  T
Q  207 tta 209  Q
    |||    
T  21570308 tta 21570306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 7 - 209
Target Start/End: Original strand, 45128185 - 45128387
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||  | ||||||| |||| |||| ||||||    
T  45128185 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgctttctcatcttcttgcggtgttcattttattcctattga 45128284  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    || ||| ||||||||||||||||||||  ||| ||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||||||| ||    
T  45128285 aatatcaattattcaatcaaagatttggacgttaacgttgcagatccggaagccatggatattccggtgactttaattttatcatatatttttgtagaca 45128384  T
Q  207 tta 209  Q
    |||    
T  45128385 tta 45128387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 7 - 196
Target Start/End: Complemental strand, 3269211 - 3269022
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||  | |||| || ||||||| ||||||||||||||||    
T  3269211 tgtgatttcatcatctaagtgtggtggcttgttgttcgtcgttttgtggggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattga 3269112  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatt 196  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||  |||||||    
T  3269111 aagatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggaggtcatggatattccggtcactttaattttactatatatt 3269022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 7 - 196
Target Start/End: Complemental strand, 3269770 - 3269581
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||  | |||| || ||||||| ||||||||||||||||    
T  3269770 tgtgatttcatcatctaagtgtggtggcttgttgttcgtcgttttgtggggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattga 3269671  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatt 196  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||  |||||||    
T  3269670 aagatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggaggtcatggatattccggtcactttaattttactatatatt 3269581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 7 - 196
Target Start/End: Complemental strand, 3270329 - 3270140
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||  | |||| || ||||||| ||||||||||||||||    
T  3270329 tgtgatttcatcatctaagtgtggtggcttgttgttcgtcgttttgtggggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattga 3270230  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatt 196  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||  |||||||    
T  3270229 aagatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggaggtcatggatattccggtcactttaattttactatatatt 3270140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 7 - 209
Target Start/End: Original strand, 4192819 - 4193020
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||| | ||||  | | ||||| || |||||||| ||||    
T  4192819 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgtggtgttgtttgatttcccgtcttcttgcagtgttcatctgattcattttga 4192918  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    | ||||||||||||  ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  4192919 a-gatcgattattccgtcaaagatttgagcgtcaacgttgcagatccggaggccatagatattccggtcactttaattttatcatatatttttgtaggca 4193017  T
Q  207 tta 209  Q
    |||    
T  4193018 tta 4193020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 19 - 209
Target Start/End: Complemental strand, 27249239 - 27249049
Alignment:
Q  19 atctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattat 118  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||||||| | |||| || ||||||| |||||||||||||||||||||||||| |    
T  27249239 atctaagtgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattgt 27249140  T
Q  119 tcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    ||||||||||||||| |||||| |||||||||||| ||||| ||| ||||||||||||||||||||| |||||||||||||||| ||||||    
T  27249139 tcaatcaaagatttgggcgtcagcgttgcagatcctgaggcaatggatattccggtcactttaatttcatcatatatttttgtacgcatta 27249049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 7 - 209
Target Start/End: Complemental strand, 40660032 - 40659830
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| | |||| || || || | ||||||||| || |||    
T  40660032 tgtgatttcatcatctaagtgtggtgctttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtccgatgctcatttgattcttactga 40659933  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||| || || ||||| ||||| ||    
T  40659932 aagatcgattattcaatcaaagatttgggcgtcaacgttggagatccggaggccatggatattccggtcactttaatttcataatttatttctgtagcca 40659833  T
Q  207 tta 209  Q
    |||    
T  40659832 tta 40659830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 7 - 209
Target Start/End: Original strand, 41431009 - 41431211
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| | ||||  | ||||||| |||| ||||  |||||    
T  41431009 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattccaattga 41431108  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    |||||||||||||||||||||||||||   ||||||||||||||||| ||| ||||| |||||||| | |||||||||||||||||||||||||||||||    
T  41431109 aagatcgattattcaatcaaagatttggatgtcaacgttgcagatccagagaccatggatattccgatgactttaattttatcatatatttttgtaggca 41431208  T
Q  207 tta 209  Q
    |||    
T  41431209 tta 41431211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 10 - 209
Target Start/End: Original strand, 27949410 - 27949609
Alignment:
Q  10 gatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaag 109  Q
    ||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||| | ||||  | || |||| ||||||||||||| |||||    
T  27949410 gatttcatcatctaagtgtggtggtttattgttcgtcgtcttgtacggcgttgtttgatttcccgtcttcttgcgatgttcatttgattcatatcgaaag 27949509  T
Q  110 atcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    ||| |||||||||||||||||||| |||||||||||||||||||  |||||||| ||||||| ||||||||||||||||||||||||||| ||| |||||    
T  27949510 atcaattattcaatcaaagatttgggcgtcaacgttgcagatccaaaggccatggatattccagtcactttaattttatcatatatttttatagacatta 27949609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 30420663 - 30420836
Alignment:
Q  11 atttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaaga 110  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||  | |||| || ||||||| ||||||||||||||||||||    
T  30420663 atttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaaga 30420762  T
Q  111 tcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaatt 184  Q
    | |||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||| ||||||||||||    
T  30420763 tagattgttcaatcaaagatttgggcgtcaacgttgcagatccggaggcaatggatattccagtcactttaatt 30420836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 7 - 209
Target Start/End: Complemental strand, 8971727 - 8971526
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||| |||||| || || |||| |||||||||||| |||    
T  8971727 tgtgatttcatcatctaagtatggtggtttgttgttcgtcgtcttgtgcagcgttgtttgatttcccatcttcgtgcgatgttcatttgattcataatga 8971628  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    |||||| |||| ||||| |||||||||   ||||||||||||||||| || | |||  ||||||||||||||||||||||||||||||||||||||| ||    
T  8971627 aagatcaatta-tcaattaaagatttggatgtcaacgttgcagatccagatgtcattgatattccggtcactttaattttatcatatatttttgtagaca 8971529  T
Q  207 tta 209  Q
    |||    
T  8971528 tta 8971526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 7 - 203
Target Start/End: Original strand, 22421716 - 22421905
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||||||||||||||||||||||||||||| | ||| |||| ||||||||||||| ||||||  | ||||||| ||||||||| ||||||    
T  22421716 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcatcttgcgcggtgttgtttgatttcccatcttcttgcggtgttcatttgattcgtattga 22421815  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtag 203  Q
    |||||||||||||||||||| |||||| ||||||||||| |||||||||||       ||||||||||||||||| |||||||||||||||||||||    
T  22421816 aagatcgattattcaatcaatgatttgggcgtcaacgttacagatccggag-------atattccggtcactttagttttatcatatatttttgtag 22421905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 7 - 147
Target Start/End: Original strand, 34598968 - 34599108
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||  |||||| || ||||||| ||||||||||||||||    
T  34598968 tgtgatttcatcatctaagtgtggtggtttgttgttcatcgtcttgtgcggcgttgtttgattttccatcttcgtgcggtgttcatttgattcatattga 34599067  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgc 147  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  34599068 aagatcgattattcaatcaaagatttgggcgtcaacgttgc 34599108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 7 - 186
Target Start/End: Complemental strand, 26025510 - 26025331
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||| |||||||||| |||||||| ||||||| ||||||||||||||||||||| || ||||  | ||||||| ||||||||||| ||||    
T  26025510 tgtgatttcatcatgtaagtgtggtagtttgttggtcgtcgtcttgtgcggcgttgtttgatttttcgtcttcttgcggtgttcatttgattcatcttga 26025411  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaatttt 186  Q
    ||||||| ||||||||||||| ||||| | ||||| ||||||||||||||||| ||||||||||| ||||||||||||||    
T  26025410 aagatcggttattcaatcaaaaatttgggtgtcaatgttgcagatccggaggcgatgaatattccagtcactttaatttt 26025331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 9 - 210
Target Start/End: Original strand, 25087020 - 25087220
Alignment:
Q  9 tgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaa 108  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||| | ||||  | | ||||| | || ||||||||| |||    
T  25087020 tgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcgacgttgtttgctttcccttcttcttgcagtgttcaatttattcatattaaaa 25087119  T
Q  109 gatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatt 208  Q
    |||||||||||||||||| ||||||  |||||||||||||||| | || |||||| ||||||| ||||||||||| |||||||||| |||||||||||||    
T  25087120 gatcgattattcaatcaatgatttggacgtcaacgttgcagattcagaagccatggatattccagtcactttaatcttatcatata-ttttgtaggcatt 25087218  T
Q  209 aa 210  Q
    ||    
T  25087219 aa 25087220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 7 - 209
Target Start/End: Original strand, 4228114 - 4228306
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||  | |||| || ||||||| |||||||||           
T  4228114 tgtgatttcatcatctaagtgtgatggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattc------- 4228206  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaa-ttttatcatatatttttgtaggc 205  Q
     |||||||||||||||||||||||||    | |||||||||||||||||||| |||| |||||||| ||||||||| |||||||||||||||||||||||    
T  4228207 -agatcgattattcaatcaaagattt---aggcaacgttgcagatccggaggtcatggatattccgatcactttaatttttatcatatatttttgtaggc 4228302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 60 - 209
Target Start/End: Complemental strand, 84227 - 84079
Alignment:
Q  60 ttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggc 159  Q
    |||||||||||| | |||| || ||||||| |||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||| |     
T  84227 ttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaa-atcgattattcaatcaaagatttggacgtcaacgttgcagatccggatgt 84129  T
Q  160 catgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    |||| ||||||||| |||||||||||||||||||||||| ||||||||||    
T  84128 catggatattccggccactttaattttatcatatattttcgtaggcatta 84079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 44 - 209
Target Start/End: Complemental strand, 32679173 - 32679008
Alignment:
Q  44 gtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacg 143  Q
    ||||| ||||| ||||||||||| ||||   ||||  | || |||| |||| |||| |||||||||||||||||||||||||||||||||  ||||||||    
T  32679173 gtcgtcttgtgtggcgttgtttgctttcctgtcttcttgcgatgttcattttattcttattgaaagatcgattattcaatcaaagatttggacgtcaacg 32679074  T
Q  144 ttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    |||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||||    
T  32679073 ttgcagatccggaggccatagatattccggtgactttaattttatcatatatttttgtaggcatta 32679008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 92 - 209
Target Start/End: Complemental strand, 40626072 - 40625955
Alignment:
Q  92 tttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcat 191  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||||  |    
T  40626072 tttgattcatattgaaagatcgattattcaatcaaagatttgatcgtcaacgttgcagatccggcggccatggatattccggtcactttaattttatgtt 40625973  T
Q  192 atatttttgtaggcatta 209  Q
    || |||||||||||||||    
T  40625972 atgtttttgtaggcatta 40625955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 28 - 209
Target Start/End: Original strand, 27477150 - 27477331
Alignment:
Q  28 tggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagta-cggtgtttatttgattcatattgaaagatcgattattcaatcaa 126  Q
    ||||||||||||||| || || |||||||||| ||||||||||  | ||||  |  ||||||| ||||||||||||||||| ||||||||||||||||||    
T  27477150 tggtggtttgttgtttgtagtcttgtgcggcgctgtttgattttccgtcttctttgcggtgttcatttgattcatattgaa-gatcgattattcaatcaa 27477248  T
Q  127 agatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    ||||||| || ||||||||||||||| | || ||||  ||||| |||||||||||||||||||||||||||||||||||||||    
T  27477249 agatttgggcatcaacgttgcagatcggaagaccatagatatttcggtcactttaattttatcatatatttttgtaggcatta 27477331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 8 - 209
Target Start/End: Complemental strand, 459373 - 459173
Alignment:
Q  8 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaa 107  Q
    |||||||| |||||| ||||| ||||| || |||||||||| |||| || |||||||||||||  | ||||  | ||||||| |||||||||||||||||    
T  459373 gtgatttcgtcatctgagtgtcgtggtgtgctgttcgtcgtcttgtacgacgttgtttgattttccgtcttgttgcggtgttcatttgattcatattgaa 459274  T
Q  108 agatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcat 207  Q
    |||||||||||| ||||||||||||  |||||||||||||||||||||| | |||   |||| | |||| |||||||||||||||||||||||||| |||    
T  459273 agatcgattatttaatcaaagatttaggcgtcaacgttgcagatccggatg-cataggtatttcagtcattttaattttatcatatatttttgtagacat 459175  T
Q  208 ta 209  Q
    ||    
T  459174 ta 459173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 9 - 209
Target Start/End: Original strand, 17319305 - 17319503
Alignment:
Q  9 tgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaa 108  Q
    ||||||| |||||| ||||||||||| |||||||| |||| |||||| |||||||| |||||  | ||||  | ||||||| |||||| ||||||||||     
T  17319305 tgatttcgtcatctgagtgtggtggtgtgttgttcttcgtcttgtgcagcgttgtt-gattttccgtcttgttgcggtgttcatttgactcatattgaa- 17319402  T
Q  109 gatcgattattcaatcaaa-gatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcat 207  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| | || |||  |||||||||||||||||||||||||||||||| | |||||||    
T  17319403 gatcgattattcaatcaaaagatttgagcgtcaacgttgcagatccgaaagc-atgggtattccggtcactttaattttatcatatatttgtataggcat 17319501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 24 - 209
Target Start/End: Complemental strand, 37614208 - 37614024
Alignment:
Q  24 agtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaat 123  Q
    ||||||||| | |||||||| |||| ||||||| |||||||||||||  | ||||  | ||||||| ||||||||||||||||||||| |||||||||||    
T  37614208 agtgtggtgatgtgttgttcttcgtcttgtgcgtcgttgtttgattttccgtcttgttgcggtgttcatttgattcatattgaaagattgattattcaat 37614109  T
Q  124 caaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    |||| ||||  | |||||||||||||||| ||| | ||||| ||||||  ||||||||||||||||||||||||||||| ||||||    
T  37614108 caaatatttttgtgtcaacgttgcagatcggga-gacatgagtattccaatcactttaattttatcatatatttttgtatgcatta 37614024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 10 - 132
Target Start/End: Complemental strand, 31580686 - 31580564
Alignment:
Q  10 gatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaag 109  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| | | || || ||||||| |||||||| ||||||||||    
T  31580686 gatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgttttatttcccgtattcgtgcggtgttcatttgatttatattgaaag 31580587  T
Q  110 atcgattattcaatcaaagattt 132  Q
    |||||||||| ||||||||||||    
T  31580586 atcgattattaaatcaaagattt 31580564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 117 - 209
Target Start/End: Complemental strand, 33229130 - 33229038
Alignment:
Q  117 attcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  33229130 attcaatcaaagatttgggcgtcaacgttgcagatccggaggccatggatattccagtcactttaattttatcatatatttttgtaggcatta 33229038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 110 - 209
Target Start/End: Complemental strand, 41712785 - 41712687
Alignment:
Q  110 atcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  41712785 atcgattattca-tcaaagatttgagcgtcaacgttgcagatacggaggccatgaatattccggtcattttaattttatcatatatttttgtaggtatta 41712687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 111 - 209
Target Start/End: Complemental strand, 38575481 - 38575383
Alignment:
Q  111 tcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  38575481 tcgattgttcaatcaaagatttgggcgtcaacgttgcagatccggaggcaatggatattccggtcactttaatttcatcatatatttttgtaggcatta 38575383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 8 - 200
Target Start/End: Complemental strand, 39641957 - 39641766
Alignment:
Q  8 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaa 107  Q
    ||||||||||||||| | ||| |||||   ||||||||| | ||||||| | |||||||||||| | ||||  | |||| || |||| ||||||||||||    
T  39641957 gtgatttcatcatctgaatgttgtggtagtttgttcgtcatcttgtgcgtcattgtttgatttcccgtcttgttgcggtattcatttaattcatattgaa 39641858  T
Q  108 agatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttg 200  Q
    ||||| ||||||||||| || ||||| || ||||||||||||||||||||| || || |||| | |||||||| |||||||||||||||||||    
T  39641857 agatcaattattcaatccaaaatttgggcatcaacgttgcagatccggagg-cacgagtatttcagtcacttttattttatcatatatttttg 39641766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 36 - 199
Target Start/End: Original strand, 8308181 - 8308342
Alignment:
Q  36 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgag 135  Q
    ||||||||||||| |||||| ||||||||||||||||  | ||  | | || || ||||||||||||||||||||||||||||||||||||||| |||      
T  8308181 tgttgttcgtcgtcttgtgcagcgttgtttgatttctg-tattgttgcagttttcatttgattcatattgaaagatcgattattcaatcaaagaattgga 8308279  T
Q  136 cgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatattttt 199  Q
    ||||||||||||||||||||| | ||| | ||||||  ||||||||| ||||||||||||||||    
T  8308280 cgtcaacgttgcagatccggatg-cataactattccaatcactttaactttatcatatattttt 8308342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 34600332 - 34600397
Alignment:
Q  144 ttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34600332 ttgcagattcggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 34600397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 188
Target Start/End: Complemental strand, 32197895 - 32197715
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    ||||||||| ||||||||||||||| || |||||  | |||| ||| ||||| ||||||||||||   ||||  | ||||||| |||||||||||||| |    
T  32197895 tgtgatttcgtcatctaagtgtggtagtgtgttgcccatcgtcttgcgcggcattgtttgatttcctgtcttgttgcggtgttcatttgattcatattaa 32197796  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttat 188  Q
    || || || |||| ||||||| ||||| ||||||| |||||||||||||| | ||||  ||||| ||||||| |||||||||    
T  32197795 aatattgactatttaatcaaatatttgggcgtcaatgttgcagatccggatg-catggttattctggtcactctaattttat 32197715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 40626128 - 40626066
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatt 69  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  40626128 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgatt 40626066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 8 - 132
Target Start/End: Complemental strand, 9374655 - 9374531
Alignment:
Q  8 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaa 107  Q
    |||||||| |||||| | ||||||||| ||||||||||| | ||||||| | ||||||| |||  | ||||  |  |||||| ||||||||||| |||||    
T  9374655 gtgatttcgtcatcttattgtggtggtgtgttgttcgtcatcttgtgcgtcattgtttgtttttccgtcttgttgtggtgttcatttgattcattttgaa 9374556  T
Q  108 agatcgattattcaatcaaagattt 132  Q
    ||| |||||||||||||||||||||    
T  9374555 agaacgattattcaatcaaagattt 9374531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 12648052 - 12647982
Alignment:
Q  8 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatctt 78  Q
    ||||||||||| |||||||| |||| | ||||||||||||| |||||||||||||||||||||||| ||||    
T  12648052 gtgatttcatcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttctcgtctt 12647982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 36 - 156
Target Start/End: Original strand, 38293559 - 38293679
Alignment:
Q  36 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgag 135  Q
    ||||||||||||| ||||| | ||||||||||| || | ||||| | |  |||| ||||| || ||||| |||||| |||| ||||||||| |||| |||    
T  38293559 tgttgttcgtcgtcttgtgtgacgttgtttgatatcccgtcttattgcaatgttcatttggtttatattaaaagattgattgttcaatcaatgattcgag 38293658  T
Q  136 cgtcaacgttgcagatccgga 156  Q
    ||||||||||| |||||||||    
T  38293659 cgtcaacgttgtagatccgga 38293679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 48
Target Start/End: Complemental strand, 32680681 - 32680640
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgt 48  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  32680681 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgt 32680640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 36 - 193
Target Start/End: Complemental strand, 44881813 - 44881657
Alignment:
Q  36 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgag 135  Q
    ||||||||||| | ||||||||| || ||| |||| |  ||||  |||  |||| |||||||||||||| ||||||   ||||||||||||  |||||      
T  44881813 tgttgttcgtcatcttgtgcggcattattttattttttgtcttcttacaatgttcatttgattcatattaaaagattagttattcaatcaataatttgca 44881714  T
Q  136 cgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatat 193  Q
    | | ||| |||||||||||||| | |||| |||| |||||||||||||||||||||||    
T  44881713 cattaacattgcagatccggagac-atgagtatttcggtcactttaattttatcatat 44881657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 6358977 - 6358899
Alignment:
Q  36 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatct--tagtacggtgtttatttgattcatattgaaagatc 112  Q
    ||||||||||||| |||||| ||||||||||||||| |||||  | ||||||||||| |||| ||| ||||||||||||    
T  6358977 tgttgttcgtcgtcttgtgcagcgttgtttgatttcgcatcttgttgtacggtgtttgtttggttcttattgaaagatc 6358899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 50 - 153
Target Start/End: Original strand, 18113893 - 18113996
Alignment:
Q  50 ttgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcag 149  Q
    |||||||||||||||||||||  | ||||| | ||||||| || || |||||||||||| |||  ||||||||| || ||||||   |||||||||||||    
T  18113893 ttgtgcggcgttgtttgattttccgtcttattgcggtgttaatatggttcatattgaaatatcagttattcaataaatgatttggatgtcaacgttgcag 18113992  T
Q  150 atcc 153  Q
    ||||    
T  18113993 atcc 18113996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 36 - 111
Target Start/End: Complemental strand, 29574732 - 29574657
Alignment:
Q  36 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||||||||| ||||||||| |||||||||||| ||| ||  | | |||||| ||||||||||||||||||||    
T  29574732 tgttgttcgtcgtcttgtgcggcattgtttgatttcacattttgttgcagtgtttgtttgattcatattgaaagat 29574657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 48
Target Start/End: Complemental strand, 41712865 - 41712824
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgt 48  Q
    ||||||||| ||||||||||||||||||||||||||||||||    
T  41712865 tgtgatttcctcatctaagtgtggtggtttgttgttcgtcgt 41712824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 113
Target Start/End: Original strand, 18763438 - 18763541
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||| |||||||| |||| | ||||||||||||| |||||||||   |||||||||| | |||||  ||||||||  |||  ||| ||||||    
T  18763438 tgtgatttcatcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcggc---gtttgatttcgcgtcttatcacggtgttcgtttagttcctattga 18763534  T
Q  107 aagatcg 113  Q
    |||||||    
T  18763535 aagatcg 18763541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 67 - 111
Target Start/End: Complemental strand, 45694407 - 45694363
Alignment:
Q  67 atttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    |||||||||||||||||||||||||||||| |||| |||||||||    
T  45694407 atttctcatcttagtacggtgtttatttgactcatgttgaaagat 45694363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 114
Target Start/End: Original strand, 14423321 - 14423399
Alignment:
Q  36 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcga 114  Q
    |||| |||||||| ||||||  |||||||||||||| ||| ||| | |||||||| |||| ||| ||||||||||||||    
T  14423321 tgttattcgtcgtcttgtgcatcgttgtttgatttcacattttattgcggtgtttgtttggttcttattgaaagatcga 14423399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 119 - 193
Target Start/End: Original strand, 18695147 - 18695220
Alignment:
Q  119 tcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatat 193  Q
    |||||||| ||||||  |||||||||||||||||  ||| ||||||||||| ||  |||||||||||||||||||    
T  18695147 tcaatcaatgatttggtcgtcaacgttgcagatctagag-ccatgaatatttcgaccactttaattttatcatat 18695220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 39310982 - 39310928
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgtt 61  Q
    |||||||||||||||||||||||||| | |||||||| |||| |||||| |||||    
T  39310982 tgtgatttcatcatctaagtgtggtgttgtgttgttcttcgtcttgtgcagcgtt 39310928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 9374514 - 9374465
Alignment:
Q  160 catgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    ||||| |||||| | ||||||||||||||||| |||||||||||||||||    
T  9374514 catgagtattccagacactttaattttatcatgtatttttgtaggcatta 9374465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 190
Target Start/End: Original strand, 3240946 - 3241049
Alignment:
Q  86 tgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattt 185  Q
    |||| ||||| ||||| |||||| | |  |||||||||||| ||||||  |||||| |||||||||  || ||| ||||||||||  |||||||||||||    
T  3240946 tgttcatttggttcatgttgaaataccagttattcaatcaatgatttggacgtcaatgttgcagattagg-ggcaatgaatattcttgtcactttaattt 3241044  T
Q  186 tatca 190  Q
    |||||    
T  3241045 tatca 3241049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 111
Target Start/End: Original strand, 5754444 - 5754492
Alignment:
Q  63 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||||||| ||||||| ||||||||||||||||||  |||||||||    
T  5754444 tttgatttctcgtcttagtgcggtgtttatttgattcaggttgaaagat 5754492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 153
Target Start/End: Original strand, 14955620 - 14955656
Alignment:
Q  117 attcaatcaaagatttgagcgtcaacgttgcagatcc 153  Q
    |||||||||| ||||||||||||||||||||||||||    
T  14955620 attcaatcaatgatttgagcgtcaacgttgcagatcc 14955656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 111
Target Start/End: Original strand, 36868164 - 36868212
Alignment:
Q  63 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||||||| ||||||| ||||||||||||||||||  |||||||||    
T  36868164 tttgatttctcgtcttagtgcggtgtttatttgattcaggttgaaagat 36868212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 192
Target Start/End: Complemental strand, 19028923 - 19028849
Alignment:
Q  117 attcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcata 192  Q
    |||||||||| ||||||||||||||||||||| |||| || | |||| ||||| |||| ||||  |||||||||||    
T  19028923 attcaatcaatgatttgagcgtcaacgttgcaaatccagaag-catggatatttcggtaacttagattttatcata 19028849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 208
Target Start/End: Complemental strand, 29279579 - 29279490
Alignment:
Q  117 attcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatt 208  Q
    |||||||||| |||||| ||||||| ||||||||||||||   ||||| | || |||| |||| ||||||||||||| | ||||||||||||    
T  29279579 attcaatcaatgatttgtgcgtcaatgttgcagatccgga-aacatgagtttttcggtgacttaaattttatcatat-tatttgtaggcatt 29279490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 208
Target Start/End: Complemental strand, 31128789 - 31128700
Alignment:
Q  117 attcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatt 208  Q
    |||||||||| |||||  |||||||||||||||||||||| | ||||| |||| | || ||||  |||||||||||| | ||||||||||||    
T  31128789 attcaatcaatgatttaggcgtcaacgttgcagatccggaag-catgagtatttcagtgacttatattttatcatat-tatttgtaggcatt 31128700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 110
Target Start/End: Original strand, 36080683 - 36080726
Alignment:
Q  67 atttctcatcttagtacggtgtttatttgattcatattgaaaga 110  Q
    ||||||| ||||| |||||||||||||||||||| |||||||||    
T  36080683 atttctcgtcttaatacggtgtttatttgattcaaattgaaaga 36080726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 193
Target Start/End: Original strand, 13141550 - 13141651
Alignment:
Q  91 atttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatca 190  Q
    ||||| ||| |||| ||||||||| ||||| ||||| ||||||  ||||||||||| |||| | || | |||||||||||| | |||||| | |||||||    
T  13141550 atttggttcctatttaaagatcgactattcgatcaatgatttggacgtcaacgttgtagattctgaag-catgaatattccagccacttttagtttatca 13141648  T
Q  191 tat 193  Q
    |||    
T  13141649 tat 13141651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 126
Target Start/End: Original strand, 17261606 - 17261636
Alignment:
Q  96 attcatattgaaagatcgattattcaatcaa 126  Q
    |||||||||||||||||||||||||||||||    
T  17261606 attcatattgaaagatcgattattcaatcaa 17261636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 110
Target Start/End: Complemental strand, 28534058 - 28533984
Alignment:
Q  36 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaaga 110  Q
    ||||||||| ||| ||||||| ||||||||||||||  |||||  | |||||||  |||||||| ||||||||||    
T  28534058 tgttgttcgccgtcttgtgcgacgttgtttgatttcaaatcttgttgcggtgttcgtttgattcctattgaaaga 28533984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 192
Target Start/End: Original strand, 36323915 - 36324019
Alignment:
Q  86 tgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattt 185  Q
    |||| ||||| ||| ||||||||||||  |||||||||||| | ||||  ||||||||||||||||| | |||  |||| |||||| | || ||||||||    
T  36323915 tgttcatttggttcctattgaaagatctgttattcaatcaatggtttggacgtcaacgttgcagatctg-agga-atgagtattccagacattttaattt 36324012  T
Q  186 tatcata 192  Q
    |||||||    
T  36324013 tatcata 36324019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 78
Target Start/End: Original strand, 37416706 - 37416748
Alignment:
Q  36 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatctt 78  Q
    ||||||||||||| ||||||| |||||||||||||| ||||||    
T  37416706 tgttgttcgtcgtcttgtgcgacgttgtttgatttcacatctt 37416748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 112
Target Start/End: Original strand, 4264472 - 4264544
Alignment:
Q  37 gttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatc 112  Q
    |||||||||||| ||||||||   ||||||||||| | ||||| | ||||||| ||||| ||| ||||||||||||    
T  4264472 gttgttcgtcgtcttgtgcgg---tgtttgatttcgcgtcttattgcggtgttcatttggttcttattgaaagatc 4264544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 154
Target Start/End: Complemental strand, 30400044 - 30400007
Alignment:
Q  117 attcaatcaaagatttgagcgtcaacgttgcagatccg 154  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  30400044 attcaatcaatgatttgggcgtcaacgttgcagatccg 30400007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 131
Target Start/End: Original strand, 34124521 - 34124566
Alignment:
Q  86 tgtttatttgattcatattgaaagatcgattattcaatcaaagatt 131  Q
    |||| |||||||||||||  ||||||||||||||||||||| ||||    
T  34124521 tgttaatttgattcatatgaaaagatcgattattcaatcaatgatt 34124566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 209
Target Start/End: Complemental strand, 36943119 - 36943040
Alignment:
Q  128 gatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    |||||| ||||||||||||||||||||||   ||||  |||| |||| |||| ||||||||||||| | |||||||||||||    
T  36943119 gatttgggcgtcaacgttgcagatccgga-aacatgggtatttcggtgacttgaattttatcatat-tatttgtaggcatta 36943040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 111
Target Start/End: Complemental strand, 4426623 - 4426575
Alignment:
Q  63 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||||| | ||||||| ||||||||||||||||||  |||||||||    
T  4426623 tttgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagat 4426575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 111
Target Start/End: Original strand, 4732226 - 4732274
Alignment:
Q  63 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||||| | ||||||| ||||||||||||||||||  |||||||||    
T  4732226 tttgatttcccgtcttagtgcggtgtttatttgattcaagttgaaagat 4732274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 208
Target Start/End: Original strand, 7646588 - 7646658
Alignment:
Q  136 cgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatt 208  Q
    ||||||||||||||||||||| | ||||| |||| |||| |||| | ||||||||||| | ||||||||||||    
T  7646588 cgtcaacgttgcagatccggaag-catgagtatttcggtgacttaagttttatcatat-tatttgtaggcatt 7646658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 111
Target Start/End: Complemental strand, 9978634 - 9978586
Alignment:
Q  63 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||||| | ||||||| ||||||||||||||||||  |||||||||    
T  9978634 tttgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagat 9978586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 111
Target Start/End: Complemental strand, 12891083 - 12891035
Alignment:
Q  63 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||||||| || |||| ||||||||||||||||||  |||||||||    
T  12891083 tttgatttctcgtcctagtgcggtgtttatttgattcaggttgaaagat 12891035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 17249250 - 17249175
Alignment:
Q  36 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatc 112  Q
    ||||||||||||| ||||||||||| |||| ||||  ||||||  | ||||||||  ||| ||||||||||||||||    
T  17249250 tgttgttcgtcgtcttgtgcggcgtagttttatttggcatcttgttgcggtgttt-gttggttcatattgaaagatc 17249175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 111
Target Start/End: Complemental strand, 20561093 - 20561049
Alignment:
Q  67 atttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||| ||||||||| ||||||||||||||||||  |||||||||    
T  20561093 atttcccatcttagtgcggtgtttatttgattcaggttgaaagat 20561049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 32448722 - 32448647
Alignment:
Q  36 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatc 112  Q
    ||||||||||||| ||||||| |||||||||||||  ||||||  | ||||| ||  ||| ||||||||||||||||    
T  32448722 tgttgttcgtcgtcttgtgcgccgttgtttgatttggcatcttgttgcggtg-ttcgttggttcatattgaaagatc 32448647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 111
Target Start/End: Complemental strand, 34963041 - 34962993
Alignment:
Q  63 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||||| | ||||||| ||||||||||||||||||  |||||||||    
T  34963041 tttgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagat 34962993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 111
Target Start/End: Complemental strand, 43474093 - 43474045
Alignment:
Q  63 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||||| | ||||||| ||||||||||||||||||  |||||||||    
T  43474093 tttgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagat 43474045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 151; Significance: 5e-80; HSPs: 64)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 11 - 209
Target Start/End: Original strand, 11464159 - 11464357
Alignment:
Q  11 atttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaaga 110  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||  |||| || ||||||| ||||||||||||||||||||    
T  11464159 atttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgatttctagtctttgtgcggtgttcatttgattcatattgaaaga 11464258  T
Q  111 tcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  11464259 tcgattgttcaatcaaagatttgggcgtcaacgttgcagatccggaggcaatggatattccggtcactttaatttcatcatatatttttgtaggcatta 11464357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 7 - 209
Target Start/End: Complemental strand, 42448127 - 42447925
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||| || |||| || ||||||| ||||||||||||||||    
T  42448127 tgtgatttcatcatctaagtgtggaggtttgttgttcgtcgtcttgtgcggcattgtttgatttttcgtcttcgtgcggtgttcatttgattcatattga 42448028  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    || |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  42448027 aatatcgattattcaatcaaagatttgggcgtcaacgttgcagatccgaaggccatgaatattccagacactttaattttatcatatatttttgtaggca 42447928  T
Q  207 tta 209  Q
    |||    
T  42447927 tta 42447925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 9 - 209
Target Start/End: Complemental strand, 32724579 - 32724379
Alignment:
Q  9 tgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaa 108  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||   |||| || | ||||| ||||||||||||||||||    
T  32724579 tgatttcatcatctaactgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttccagtcttcgtgcagtgttcatttgattcatattgaaa 32724480  T
Q  109 gatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatt 208  Q
     |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||    
T  32724479 tatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggaggccatggatattccggtcactttaatcttatcttatatttttgtaggcatt 32724380  T
Q  209 a 209  Q
    |    
T  32724379 a 32724379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 11 - 209
Target Start/End: Original strand, 4808952 - 4809150
Alignment:
Q  11 atttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaaga 110  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||  | |||| || ||||||| ||||||||||||||||||||    
T  4808952 atttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaaga 4809051  T
Q  111 tcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    |||||| ||||||||| |||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  4809052 tcgattgttcaatcaaggatttgggcgtcaacgttgcagatccggaggcaatggatattccggtcactttaatttcatcatatatttttgtaggcatta 4809150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 7 - 214
Target Start/End: Original strand, 34611788 - 34611995
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  | || | || ||||||| ||||||||||||||||    
T  34611788 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcgtcgtgcggtgttcatttgattcatattga 34611887  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    |||||   | ||||||||||||||||| ||||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  34611888 aagataagtaattcaatcaaagatttgggcgtcaacgttgcagattcggaggcgatggatattccggtcactttaattttatcatatatttttgtaggca 34611987  T
Q  207 ttaacttg 214  Q
    ||| ||||    
T  34611988 ttatcttg 34611995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 11 - 209
Target Start/End: Original strand, 2655858 - 2656056
Alignment:
Q  11 atttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaaga 110  Q
    |||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||| | |||| || ||||||| ||||||||||||||||||||    
T  2655858 atttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcagcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaaga 2655957  T
Q  111 tcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    |||||| |||||||||||||||| | |||||||| |||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  2655958 tcgattgttcaatcaaagatttgggtgtcaacgtcgcagatccggaggcaatggatattccggtcactttaatttcatcatatatttttgtaggcatta 2656056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 11 - 209
Target Start/End: Complemental strand, 43890220 - 43890022
Alignment:
Q  11 atttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaaga 110  Q
    |||||||||||||||| ||||| ||||||||||||||| ||||||| |||| ||||||||| | |||| |||||||||| ||||||||||| ||||||||    
T  43890220 atttcatcatctaagtatggtgatttgttgttcgtcgtcttgtgcgacgttatttgatttcccgtcttcgtacggtgttcatttgattcattttgaaaga 43890121  T
Q  111 tcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  43890120 tcgattgttcaatcaaagatttgggcgtcaacgttgcagatccggaggcaatggatattccggtcactttaatttcatcatatatttttgtaggcatta 43890022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 7 - 209
Target Start/End: Complemental strand, 44100033 - 44099834
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||  | ||||||| ||||||||||||||||    
T  44100033 tgtgattt-atcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtctttttgcggtgttcatttgattcatattga 44099935  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    |||||| |||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||    
T  44099934 aagatcaattattcaatcaaagagttgggcgtgaacgttgcagatccggaggccatgaatattccg--cactttaattttatcatatatttttgtatgca 44099837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 11 - 202
Target Start/End: Complemental strand, 9619453 - 9619262
Alignment:
Q  11 atttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaaga 110  Q
    ||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||||| | |||| || ||||||| ||||||||||||||||||||    
T  9619453 atttcatcatctacgtgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaaga 9619354  T
Q  111 tcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgta 202  Q
    |||||| || ||||||||||||| |||||||| |||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||    
T  9619353 tcgattgttaaatcaaagatttgggcgtcaactttgcagatccggaggcaatggatattccggtcactttaatttcatcatatatttttgta 9619262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 7 - 209
Target Start/End: Original strand, 19876195 - 19876396
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| | | ||||  |  |||||| ||||||||||||||||    
T  19876195 tgtgatttcatcatctaagtgtagtggtttgttgttcgtcgtcttgtgcggcgttgtttgattccccgtcttcttgtggtgttcatttgattcatattga 19876294  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    | ||||||||||||||||||||||||| || | |||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  19876295 a-gatcgattattcaatcaaagatttgggcctgaacgttgcagatccggagaccatggatattccggtcactttaatttgatcatatatttttgtaggca 19876393  T
Q  207 tta 209  Q
    |||    
T  19876394 tta 19876396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 9 - 209
Target Start/End: Original strand, 11725667 - 11725866
Alignment:
Q  9 tgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaa 108  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||| | |||||||||||| ||| ||  | ||||||| || ||||||||||||||     
T  11725667 tgatttcatcatctaagtgtggtggtttgttgttcatcgtcttgtgcgacattgtttgatttcccattttcttgcggtgttcatctgattcatattgaa- 11725765  T
Q  109 gatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatt 208  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||    
T  11725766 gatcgattattcaattaaagatttgggcgtcaacgttgcagatccggaggccatggatactccggtcactttagttttatcatatatttttgtaggcatt 11725865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 7 - 209
Target Start/End: Original strand, 9072702 - 9072904
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    ||||||||||||||||||||||||||||||||||||| || | ||||||||||||||||| |||| ||||||  | ||||||| |||| |||| ||||||    
T  9072702 tgtgatttcatcatctaagtgtggtggtttgttgttcttcatcttgtgcggcgttgtttgctttcccatcttcttgcggtgttcattttattcctattga 9072801  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    |||||||||||||||||||||||||||   ||||||||||||||| ||||||||||| |||||||| | ||||||||||||||||||||||||||| |||    
T  9072802 aagatcgattattcaatcaaagatttggatgtcaacgttgcagattcggaggccatggatattccgatgactttaattttatcatatatttttgtatgca 9072901  T
Q  207 tta 209  Q
    |||    
T  9072902 tta 9072904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 7 - 209
Target Start/End: Original strand, 33896066 - 33896272
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||| | ||||  | ||||||| |||| ||||  |||||    
T  33896066 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcttcttgtgcggcgttgtttgttttcccgtcttcttgcggtgttcattttattccaattga 33896165  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattt----tatcatatatttttgta 202  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||| ||||||||||    |||||||||||||||||    
T  33896166 aagatcgattattcaatcaaagatttggacgtcaacgttgcagatccggaggccatggatattccggtgactttaattttatctatcatatatttttgta 33896265  T
Q  203 ggcatta 209  Q
    |||||||    
T  33896266 ggcatta 33896272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 7 - 209
Target Start/End: Original strand, 29777203 - 29777405
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||| |||| | ||||  | ||||||| |||| |||| ||||||    
T  29777203 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcgacattgtttgctttcccgtcttcttgcggtgttcattttattcctattga 29777302  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    |||||||||||||||||||||||||||  ||||||| |||||||||||||| ||||| |||||||||| |||||||| |||||||||||||||| |||||    
T  29777303 aagatcgattattcaatcaaagatttggacgtcaacattgcagatccggagaccatggatattccggtgactttaatattatcatatatttttggaggca 29777402  T
Q  207 tta 209  Q
    |||    
T  29777403 tta 29777405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 8 - 202
Target Start/End: Complemental strand, 43192445 - 43192252
Alignment:
Q  8 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaa 107  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  | ||||  |  |||||| ||||||||||| |||||    
T  43192445 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcttgtggtgttcatttgattcattttgaa 43192346  T
Q  108 agatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgta 202  Q
    ||||||||||||| |||||| ||||| | |||||||||||||||||||| | ||||||||||||| |||||||||||||||||||||||||||||    
T  43192345 agatcgattattcgatcaaatatttgggtgtcaacgttgcagatccgga-gacatgaatattccgatcactttaattttatcatatatttttgta 43192252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 9 - 209
Target Start/End: Original strand, 11196875 - 11197069
Alignment:
Q  9 tgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaa 108  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  | ||||  | ||||||| |||||||||||||||||     
T  11196875 tgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcttgcggtgttcatttgattcatattgaa- 11196973  T
Q  109 gatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatt 208  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||     || |||||||| ||||||||||||||| |||||||||||||||||||    
T  11196974 gatcgattattcaatcaacgatttgggcgtcaacgttgcagatccgga-----tggatattccgatcactttaattttattatatatttttgtaggcatt 11197068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 11 - 209
Target Start/End: Complemental strand, 9498695 - 9498497
Alignment:
Q  11 atttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaaga 110  Q
    |||||||||||||||||||||| |||||||||||| || ||||||||| |||||||||||| | |||| || ||||||| |||||||||||||| |||||    
T  9498695 atttcatcatctaagtgtggtgatttgttgttcgttgtcttgtgcggctttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattaaaaga 9498596  T
Q  111 tcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    |||||| ||||||||||||||||  || |||||||| ||||||| |||| ||| ||||||| ||||||||||||| |||||||||||||||||||||||    
T  9498595 tcgattgttcaatcaaagatttggacgacaacgttgtagatccgaaggcaatggatattcctgtcactttaatttcatcatatatttttgtaggcatta 9498497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 11 - 209
Target Start/End: Complemental strand, 14907019 - 14906821
Alignment:
Q  11 atttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaaga 110  Q
    ||||||||||| || ||||||| ||||||||| ||||| |||||||||||||||||||||| | |||| || || |||| ||||||||| |||| |||||    
T  14907019 atttcatcatcaaaatgtggtgatttgttgtttgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcgatgttcatttgattcgtattaaaaga 14906920  T
Q  111 tcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    |||||| ||||||||| |||||| |||||||||||||||||  |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  14906919 tcgattgttcaatcaatgatttgggcgtcaacgttgcagatttggaggcaatggatattccggtcactttaattttatcatatatttttgtaggcatta 14906821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 8 - 209
Target Start/End: Original strand, 35580442 - 35580642
Alignment:
Q  8 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaa 107  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||  | ||||  | |||||||  ||||||||||||||||    
T  35580442 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcgacgttgtttgattttccgtcttcttgcggtgttcgtttgattcatattgaa 35580541  T
Q  108 agatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcat 207  Q
     ||||||||||||| ||||||||||  || | ||||||||||||||||| | |||| ||||||||||||||||| |||||||||||||||||||||||||    
T  35580542 tgatcgattattcactcaaagatttaggcatgaacgttgcagatccggatg-catggatattccggtcactttagttttatcatatatttttgtaggcat 35580640  T
Q  208 ta 209  Q
    ||    
T  35580641 ta 35580642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 11 - 209
Target Start/End: Original strand, 44578024 - 44578216
Alignment:
Q  11 atttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaaga 110  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||| || || ||||||  | |||| ||||||||||| |||||||||||    
T  44578024 atttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttcatctcccatcttcatgcggtatttatttgatttatattgaaaga 44578123  T
Q  111 tcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    |||||||||        |||||| |||||||||||||||||||| | | |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  44578124 tcgattatt------ttgatttgggcgtcaacgttgcagatccgaatgacatggatattccggtcactttaattttatcatatatttttgtaggcatta 44578216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 10 - 209
Target Start/End: Complemental strand, 37565976 - 37565777
Alignment:
Q  10 gatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaag 109  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||  | || | || ||| ||| |||||||||||||||||||    
T  37565976 gatttcatcatctaagtgtggtggtttgttattcgtcgtcttgtgcggcattgtttgattttccttcgtcgtgcggcgttcatttgattcatattgaaag 37565877  T
Q  110 atcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    ||   | ||||||| ||||||||| |||| ||||||||||||||| | || ||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  37565876 ataagtaattcaattaaagatttgggcgttaacgttgcagatccgaatgcgatggatattccggtcactttgattttatcatatatttttgtaggcatta 37565777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 10 - 209
Target Start/End: Original strand, 28239820 - 28240027
Alignment:
Q  10 gatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaag 109  Q
    |||||| |||| | ||||||| ||||||||||||||||| |||||||||||||||||||| ||| | ||  | ||||||| |||||||| ||||||||||    
T  28239820 gatttcgtcatttgagtgtggcggtttgttgttcgtcgtcttgtgcggcgttgtttgattcctcgtattgttgcggtgttcatttgattaatattgaaag 28239919  T
Q  110 atcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggc--------catgaatattccggtcactttaattttatcatatatttttgt 201  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||        ||||  |||||||||||||||||||||||||| |||||||||    
T  28239920 atcaattattcaatcaaagatttgagcgtcaacgttgcagatccggaggcatggaagacatgggtattccggtcactttaattttatcatttatttttgt 28240019  T
Q  202 aggcatta 209  Q
    | ||||||    
T  28240020 aagcatta 28240027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 44 - 209
Target Start/End: Complemental strand, 23851557 - 23851392
Alignment:
Q  44 gtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacg 143  Q
    ||||| ||||||| |||||||||||||| | |||| || ||||||| |||||||||||||||||||||||||| ||||||||||||||||  ||||||||    
T  23851557 gtcgtcttgtgcgacgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattgttcaatcaaagatttggacgtcaacg 23851458  T
Q  144 ttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    |||||||||||||||| ||| ||||| |||| |||||||||| |||||||||||||||||||||||    
T  23851457 ttgcagatccggaggcaatggatatttcggtaactttaatttcatcatatatttttgtaggcatta 23851392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 50 - 209
Target Start/End: Original strand, 17949262 - 17949419
Alignment:
Q  50 ttgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcag 149  Q
    |||||||||||||||||||||  | |||| ||  |||||| |||| |||||||||||||||||||||||||||||| ||||||| ||||||||||| |||    
T  17949262 ttgtgcggcgttgtttgatttgccgtcttcgtgtggtgttcattttattcatattgaaagatcgattattcaatcagagatttgggcgtcaacgttccag 17949361  T
Q  150 atccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||  |||||||||||||    
T  17949362 atccggaggccatggatattacggtcactttaattttatcatata--tttgtaggcatta 17949419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 7 - 209
Target Start/End: Original strand, 33298839 - 33299040
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    ||||||||| ||||| |||| | ||||| |||||||| |||| ||||| || ||||||||||||||| ||||  | ||||||| ||||||||||||| ||    
T  33298839 tgtgatttcgtcatccaagtctagtggtgtgttgttcatcgtcttgtgtggtgttgtttgatttctcgtcttgctgcggtgttcatttgattcatatcga 33298938  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    ||||  ||||||||||| |||||||||  |||||||||||||||| |||| | ||||| |||||  ||||||||||||||||||||||||||| ||||||    
T  33298939 aagagtgattattcaattaaagatttggtcgtcaacgttgcagatacggatg-catgagtattctagtcactttaattttatcatatatttttataggca 33299037  T
Q  207 tta 209  Q
    |||    
T  33299038 tta 33299040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 8 - 209
Target Start/End: Original strand, 33342422 - 33342620
Alignment:
Q  8 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaa 107  Q
    |||||||| ||| | |||||||||||| |||||||| |||| || ||||||||| ||||||||| | | ||  | |||||||||||||||||||||||||    
T  33342422 gtgatttcgtcacccaagtgtggtggtgtgttgttcttcgtcttatgcggcgttttttgatttcccgtattgttgcggtgtttatttgattcatattgaa 33342521  T
Q  108 agatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcat 207  Q
     |||| |||||||||||||||| |||  ||||| ||||||||||| |||||| |||| ||||| |||||||||||||||||||||||| |||||||||||    
T  33342522 -gatcaattattcaatcaaagaattggacgtca-cgttgcagatctggaggc-atgagtattcaggtcactttaattttatcatatatatttgtaggcat 33342618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 8 - 209
Target Start/End: Complemental strand, 39153241 - 39153040
Alignment:
Q  8 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaa 107  Q
    |||||||| |||||  ||||||||||| ||||||||||||| |||||  |||||||| |||||| | ||||  |||| | || |||||||||| ||||||    
T  39153241 gtgatttcgtcatccgagtgtggtggtgtgttgttcgtcgtcttgtgtcgcgttgttcgatttcgcgtcttgttacgattttcatttgattcacattgaa 39153142  T
Q  108 agatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatata-tttttgtaggca 206  Q
    |||| ||||||||||| ||| ||||| | |||| ||||||||||||||||| ||||  ||||||| ||||||||||||||||||||| ||||||||||||    
T  39153141 agattgattattcaattaaaaatttgggtgtcagcgttgcagatccggagg-catgggtattccgatcactttaattttatcatatattttttgtaggca 39153043  T
Q  207 tta 209  Q
    |||    
T  39153042 tta 39153040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 8 - 209
Target Start/End: Original strand, 15046879 - 15047078
Alignment:
Q  8 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaa 107  Q
    |||||||| |||||  ||||||||||| ||||||||||||| |||||||| | |||||||||||   |||| || || ||||||||||||| ||||||||    
T  15046879 gtgatttcgtcatccgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgctgtttgatttcctgtcttggtgcgatgtttatttgattgatattgaa 15046978  T
Q  108 agatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcat 207  Q
    | ||||||| | |||| |||| ||||  |||||||||||||||||| |||| ||||  ||||||| | ||||||||||||||||||||||||||||||||    
T  15046979 aaatcgatt-tccaataaaagttttggacgtcaacgttgcagatccagagg-catgtgtattccgattactttaattttatcatatatttttgtaggcat 15047076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 8 - 209
Target Start/End: Complemental strand, 27747212 - 27747013
Alignment:
Q  8 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaa 107  Q
    ||||||||| |||||  |||||||||| ||||||||||| | ||||||| |  |||||||||||   | ||  | ||||||| |||||||||||||||||    
T  27747212 gtgatttcaccatctgggtgtggtggtgtgttgttcgtcatcttgtgcgacagtgtttgatttcctgttttgttgcggtgttcatttgattcatattgaa 27747113  T
Q  108 agatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcat 207  Q
    ||||| |||||||||||||||||||| || ||||||||| ||||||||| | ||||  ||||||||||||||| | ||||||||||||||||||||||||    
T  27747112 agatcaattattcaatcaaagatttgggcatcaacgttgtagatccggatg-catgggtattccggtcactttta-tttatcatatatttttgtaggcat 27747015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 85 - 209
Target Start/End: Complemental strand, 43135600 - 43135477
Alignment:
Q  85 gtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaatt 184  Q
    ||||| || ||||||||| |||| ||||||||||||||||||||||||| ||||||||||| |||||||||| |||||| |||||| |||||||||||||    
T  43135600 gtgttcatctgattcatagtgaa-gatcgattattcaatcaaagatttgggcgtcaacgtttcagatccggaagccatgtatattctggtcactttaatt 43135502  T
Q  185 ttatcatatatttttgtaggcatta 209  Q
    |||||||||||||| ||||||||||    
T  43135501 ttatcatatattttcgtaggcatta 43135477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 8 - 209
Target Start/End: Original strand, 16794277 - 16794477
Alignment:
Q  8 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaa 107  Q
    ||||||||||||||  || |||||| | ||||||||||||| ||||||  ||| |||||||||| | | ||  ||||||||| |||||||||||||||||    
T  16794277 gtgatttcatcatccgagagtggtgttatgttgttcgtcgtcttgtgcaacgtcgtttgatttcccgtattgttacggtgttcatttgattcatattgaa 16794376  T
Q  108 agatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcat 207  Q
    ||||| |||||||||||||||| |||| | |||||||||||||  || ||| ||||  ||||| ||||  | |||||||||||||||||||||||| |||    
T  16794377 agatcaattattcaatcaaagaattgaacatcaacgttgcagaatcgaagg-catgggtattctggtctatataattttatcatatatttttgtagacat 16794475  T
Q  208 ta 209  Q
    ||    
T  16794476 ta 16794477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 9 - 209
Target Start/End: Complemental strand, 15597265 - 15597066
Alignment:
Q  9 tgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaa 108  Q
    ||||||| |||||  ||||| ||||| ||||||| ||||| ||||| ||| ||| |||||||  | | ||  ||||||||| |||||||||||||| ||     
T  15597265 tgatttcgtcatccgagtgtagtggtgtgttgtttgtcgtcttgtgaggccttggttgattttccgttttgttacggtgttcatttgattcatattaaac 15597166  T
Q  109 gatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatt 208  Q
    ||||| |||||||||| ||||||||||||||||||||| ||||||  | | |||  ||||| |||||||||||||||| ||||||| ||||||| |||||    
T  15597165 gatcggttattcaatcgaagatttgagcgtcaacgttgtagatccata-gtcatagatatttcggtcactttaattttctcatatacttttgtatgcatt 15597067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 112
Target Start/End: Original strand, 36532894 - 36532986
Alignment:
Q  20 tctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatc 112  Q
    |||| |||||||| | ||||||||||||| |||||||| ||||||||||||||||| ||  |  |||||||||||| ||| ||||||||||||    
T  36532894 tctaggtgtggtgttgtgttgttcgtcgtcttgtgcggtgttgtttgatttctcattttgttttggtgtttatttggttcctattgaaagatc 36532986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 85 - 193
Target Start/End: Original strand, 35812723 - 35812830
Alignment:
Q  85 gtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaatt 184  Q
    ||||||||||||||||||||||||||||| ||||||||| || ||||||  ||| ||||||| |||| |  | | ||||| |||| | || |||||||||    
T  35812723 gtgtttatttgattcatattgaaagatcggttattcaattaatgatttggacgttaacgttgaagatac-aaagacatgagtatttcagtgactttaatt 35812821  T
Q  185 ttatcatat 193  Q
    |||||||||    
T  35812822 ttatcatat 35812830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 61 - 100
Target Start/End: Original strand, 10148099 - 10148138
Alignment:
Q  61 tgtttgatttctcatcttagtacggtgtttatttgattca 100  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  10148099 tgtttgatttctcatcttagtacggtgtttatttgattca 10148138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 8443639 - 8443579
Alignment:
Q  9 tgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatt 69  Q
    ||||||| || |||||||| |||| | ||||||||||||| ||||||||||||||||||||    
T  8443639 tgatttcgtcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcggcgttgtttgatt 8443579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 10 - 112
Target Start/End: Original strand, 5333391 - 5333493
Alignment:
Q  10 gatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaag 109  Q
    |||||| |||||| |||| |||| | ||||||||||||| |||||||| ||||||||||||  | ||||  | |||||||  |||| ||| |||||||||    
T  5333391 gatttcgtcatctgagtgcggtgttgtgttgttcgtcgtcttgtgcggtgttgtttgattttgcgtcttgttccggtgttcgtttggttcctattgaaag 5333490  T
Q  110 atc 112  Q
    |||    
T  5333491 atc 5333493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 83 - 193
Target Start/End: Original strand, 14913137 - 14913246
Alignment:
Q  83 cggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaa 182  Q
    ||||||| |||||||||  || |||||||| || | |||||||| ||||||||| ||||| ||||| ||  |||||| |||  ||||||| |||| ||||    
T  14913137 cggtgttcatttgattctgatcgaaagatcaataaatcaatcaatgatttgagcatcaacattgcatattgggaggc-atgtgtattccgatcaccttaa 14913235  T
Q  183 ttttatcatat 193  Q
    |||||||||||    
T  14913236 ttttatcatat 14913246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 61 - 111
Target Start/End: Complemental strand, 30026857 - 30026807
Alignment:
Q  61 tgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||||||| | ||||||| ||||||||||||||||||| |||||||||    
T  30026857 tgtttgatttcccgtcttagtgcggtgtttatttgattcatgttgaaagat 30026807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 193
Target Start/End: Complemental strand, 7677278 - 7677214
Alignment:
Q  128 gatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatat 193  Q
    ||||||||||||||||||||||||||||| | |||||||||| |||| ||||   |||||||||||    
T  7677278 gatttgagcgtcaacgttgcagatccggaag-catgaatatttcggtgacttaggttttatcatat 7677214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 11267162 - 11267194
Alignment:
Q  177 ctttaattttatcatatatttttgtaggcatta 209  Q
    |||||||||||||||||||||||||||||||||    
T  11267162 ctttaattttatcatatatttttgtaggcatta 11267194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 108
Target Start/End: Complemental strand, 24099356 - 24099284
Alignment:
Q  36 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaa 108  Q
    |||||||||||||  ||| | ||||||||||||||| ||||||  | ||||||| ||||| ||||||||||||    
T  24099356 tgttgttcgtcgtcctgtaccgcgttgtttgatttcgcatcttgttgcggtgttcatttggttcatattgaaa 24099284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 111
Target Start/End: Complemental strand, 28297080 - 28297032
Alignment:
Q  63 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||||| ||||||||| ||||||||||||||||||  |||||||||    
T  28297080 tttgatttcccatcttagtgcggtgtttatttgattcaggttgaaagat 28297032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 39657440 - 39657480
Alignment:
Q  38 ttgttcgtcgtattgtgcggcgttgtttgatttctcatctt 78  Q
    ||||||||||| |||||||||||||||||||||| ||||||    
T  39657440 ttgttcgtcgtcttgtgcggcgttgtttgatttcgcatctt 39657480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 156
Target Start/End: Complemental strand, 471172 - 471133
Alignment:
Q  117 attcaatcaaagatttgagcgtcaacgttgcagatccgga 156  Q
    |||||||||| |||||| ||||||||||||||||||||||    
T  471172 attcaatcaatgatttgtgcgtcaacgttgcagatccgga 471133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 152
Target Start/End: Complemental strand, 27110471 - 27110436
Alignment:
Q  117 attcaatcaaagatttgagcgtcaacgttgcagatc 152  Q
    |||||||||| |||||||||||||||||||||||||    
T  27110471 attcaatcaatgatttgagcgtcaacgttgcagatc 27110436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 7883368 - 7883314
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgtt 61  Q
    ||||||||| ||||||||||| || | | ||||||||||||| ||||||||||||    
T  7883368 tgtgatttcgtcatctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt 7883314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 23230605 - 23230659
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgtt 61  Q
    ||||||||| || |||||||| || | ||||||||||||||| ||||||||||||    
T  23230605 tgtgatttcgtcgtctaagtgcggcgatttgttgttcgtcgtcttgtgcggcgtt 23230659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 110
Target Start/End: Complemental strand, 29617375 - 29617301
Alignment:
Q  36 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaaga 110  Q
    ||||||||||||| |||||||||| ||||||||||| | ||||  | |||||||  |||| ||| ||||||||||    
T  29617375 tgttgttcgtcgtcttgtgcggcgctgtttgatttcgcgtcttgttgcggtgttcgtttggttcttattgaaaga 29617301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 37971245 - 37971299
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgtt 61  Q
    ||||||||| || |||||||| || | ||||||||||||||| ||||||||||||    
T  37971245 tgtgatttcgtcgtctaagtgcggcgttttgttgttcgtcgtcttgtgcggcgtt 37971299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 108
Target Start/End: Original strand, 10334332 - 10334377
Alignment:
Q  63 tttgatttctcatcttagtacggtgtttatttgattcatattgaaa 108  Q
    |||||| |||| ||||||| |||||||||||||||||| |||||||    
T  10334332 tttgatctctcgtcttagtgcggtgtttatttgattcagattgaaa 10334377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 1236797 - 1236722
Alignment:
Q  36 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatc 112  Q
    |||||||||| || |||||||||||||||||||||  ||||||  | ||||| ||  ||| ||||||||||||||||    
T  1236797 tgttgttcgttgtcttgtgcggcgttgtttgatttggcatcttgttgcggtg-ttcgttggttcatattgaaagatc 1236722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 1239497 - 1239422
Alignment:
Q  36 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatc 112  Q
    |||||||| |||| |||||||||||||||||||||  ||||||  | ||||| ||  ||| ||||||||||||||||    
T  1239497 tgttgttcatcgtcttgtgcggcgttgtttgatttggcatcttgttgcggtg-ttcgttggttcatattgaaagatc 1239422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 111
Target Start/End: Complemental strand, 2025185 - 2025149
Alignment:
Q  75 tcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||| |||||||||||||||||| ||||||||||    
T  2025185 tcttagtgcggtgtttatttgattcagattgaaagat 2025149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 111
Target Start/End: Complemental strand, 3204758 - 3204710
Alignment:
Q  63 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||||||| ||||||| | ||||||||||||||||  |||||||||    
T  3204758 tttgatttctcgtcttagtgcagtgtttatttgattcaagttgaaagat 3204710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 193
Target Start/End: Original strand, 12184356 - 12184447
Alignment:
Q  101 tattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatat 193  Q
    |||||||| ||||| ||||| ||||| |||||| |||||| |||||| ||| ||||||| ||   ||||| || || ||||||||||||||||    
T  12184356 tattgaaaaatcgactattccatcaatgatttgggcgtcaccgttgctgattcggaggc-atatgtattctggacattttaattttatcatat 12184447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 193
Target Start/End: Original strand, 12428784 - 12428875
Alignment:
Q  101 tattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatat 193  Q
    |||||||| ||||| ||||| ||||| |||||| |||||| |||||| ||| ||||||| ||   ||||| || || ||||||||||||||||    
T  12428784 tattgaaaaatcgactattccatcaatgatttgggcgtcaccgttgctgattcggaggc-atatgtattctggacattttaattttatcatat 12428875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 15344297 - 15344372
Alignment:
Q  36 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatc 112  Q
    ||||||||||||| ||||||||||| |||||||||  ||||||  | ||||| ||  ||| ||||||||||||||||    
T  15344297 tgttgttcgtcgtcttgtgcggcgtagtttgatttgacatcttgttgcggtg-ttcgttggttcatattgaaagatc 15344372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 15433362 - 15433437
Alignment:
Q  36 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatc 112  Q
    ||||||||||||| ||||||||||| |||||||||  ||||||  | ||||| ||  ||| ||||||||||||||||    
T  15433362 tgttgttcgtcgtcttgtgcggcgtagtttgatttgacatcttgttgcggtg-ttcgttggttcatattgaaagatc 15433437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 15524666 - 15524741
Alignment:
Q  36 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatc 112  Q
    ||||||||||||| ||||||||||| |||||||||  ||||||  | ||||| ||  ||| ||||||||||||||||    
T  15524666 tgttgttcgtcgtcttgtgcggcgtagtttgatttgacatcttgttgcggtg-ttcgttggttcatattgaaagatc 15524741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 153
Target Start/End: Complemental strand, 18890705 - 18890669
Alignment:
Q  117 attcaatcaaagatttgagcgtcaacgttgcagatcc 153  Q
    |||||||||| |||||| |||||||||||||||||||    
T  18890705 attcaatcaatgatttgggcgtcaacgttgcagatcc 18890669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 111
Target Start/End: Original strand, 37612809 - 37612857
Alignment:
Q  63 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||||| | ||||||| ||||||||||||||||||  |||||||||    
T  37612809 tttgatttcccgtcttagtgcggtgtttatttgattcaagttgaaagat 37612857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 111
Target Start/End: Complemental strand, 38546114 - 38546078
Alignment:
Q  75 tcttagtacggtgtttatttgattcatattgaaagat 111  Q
    |||||||||| ||||||||||||||| ||||||||||    
T  38546114 tcttagtacgatgtttatttgattcagattgaaagat 38546078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 111
Target Start/End: Complemental strand, 43937150 - 43937102
Alignment:
Q  63 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||||| | ||||||| ||||||||||||||||||  |||||||||    
T  43937150 tttgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagat 43937102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 147; Significance: 1e-77; HSPs: 50)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 7 - 209
Target Start/End: Complemental strand, 4984667 - 4984465
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| | |||| ||  |||||| ||||||||||||||||    
T  4984667 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttcgtgaggtgttcatttgattcatattga 4984568  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    ||||||||||||||||||||||||||| || |||||||||||||| |||||| |||| |||||||| |||||||||||||||||||||||||||||||||    
T  4984567 aagatcgattattcaatcaaagatttgggcatcaacgttgcagattcggaggtcatggatattccgatcactttaattttatcatatatttttgtaggca 4984468  T
Q  207 tta 209  Q
    |||    
T  4984467 tta 4984465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 7 - 209
Target Start/End: Original strand, 12652921 - 12653123
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||  |||||| || ||||||| ||||||||||||||||    
T  12652921 tgtgatttcatcatctaagtgtggtggtttgttgttcatcgtcttgtgcggcgttgtttgattttccatcttcgtgcggtgttcatttgattcatattga 12653020  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    |||||||||||||||||||||||||||  ||||||||||||||||| ||||| |||| ||||||||||| |||||||||||||||||||||||||| |||    
T  12653021 aagatcgattattcaatcaaagatttggccgtcaacgttgcagatctggaggtcatggatattccggtcgctttaattttatcatatatttttgtacgca 12653120  T
Q  207 tta 209  Q
    |||    
T  12653121 tta 12653123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 9 - 209
Target Start/End: Original strand, 4088439 - 4088639
Alignment:
Q  9 tgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaa 108  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| | |||| || || |||| ||||||||| ||  ||||    
T  4088439 tgatttcatcatctaagtgtggtggtttgttgttcatcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcgatgttcatttgattcttacagaaa 4088538  T
Q  109 gatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatt 208  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  4088539 gatcgattgttcaatcaaagatttgggcgtcaacgttgcagatccggaggccatggatattccggtcactttaattttatcatatatttttgtaggcatt 4088638  T
Q  209 a 209  Q
    |    
T  4088639 a 4088639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 11 - 209
Target Start/End: Complemental strand, 7881198 - 7881000
Alignment:
Q  11 atttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaaga 110  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||  ||||||  | ||||||| | ||||||||||||||||||    
T  7881198 atttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgattttccatcttcatgcggtgttcaattgattcatattgaaaga 7881099  T
Q  111 tcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  7881098 tcgattgttcaatcaaagatttgggcgtcaacgttgcagatccggaggcaatggatattccggtcactttaatttcatcatatatttttgtaggcatta 7881000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 7 - 209
Target Start/End: Original strand, 16419135 - 16419337
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| | ||||  | ||||||| |||| |||||||||||    
T  16419135 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattcatattga 16419234  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    || ||||||||||||||||||||||||  |||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||    
T  16419235 aaaatcgattattcaatcaaagatttggacgtcaacgttgcagatccggaggcaatggatattccggtgactttaattttatcatatatttttgtaggca 16419334  T
Q  207 tta 209  Q
    |||    
T  16419335 tta 16419337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 7 - 209
Target Start/End: Complemental strand, 33740678 - 33740476
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||  | || | || ||||||| |||||||| |||||||    
T  33740678 tgtgatttcatcatctaagtgtggcggtttgttgttcgtcgttttgtgcggcgttgtttcatttaccgtcctcgtgcggtgttcatttgatttatattga 33740579  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||    
T  33740578 aagatcgattattcaatcgaagatttgagcgtcaacgttgcagatccggaggccatggatatttcggtcactttaattttatcatatatttttataggca 33740479  T
Q  207 tta 209  Q
    |||    
T  33740478 tta 33740476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 9 - 209
Target Start/End: Complemental strand, 23947416 - 23947215
Alignment:
Q  9 tgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaa 108  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||  | ||||||| ||||||||||||||||||    
T  23947416 tgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttcccatctttttgcggtgttcatttgattcatattgaaa 23947317  T
Q  109 gatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcacttt-aattttatcatatatttttgtaggcat 207  Q
    ||||||| || ||||||| |||||| ||||||| ||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||    
T  23947316 gatcgataatccaatcaacgatttgggcgtcaatgttgcagatccggaggccatggatattctggtcactttaaattttatcatatatttttgtaggcat 23947217  T
Q  208 ta 209  Q
    ||    
T  23947216 ta 23947215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 9 - 209
Target Start/End: Complemental strand, 8028216 - 8028016
Alignment:
Q  9 tgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaa 108  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | || | |||||||||| |||||||||||||| |||    
T  8028216 tgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcatcgtacggtgttcatttgattcatattaaaa 8028117  T
Q  109 gatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatt 208  Q
    ||||| ||||||||||||||||||| |||| ||| ||||||||||| ||| |||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  8028116 gatcggttattcaatcaaagatttgggcgttaacattgcagatccgaaggtcatggatattccagtcactttaattttatcatatatttttgtaggcatt 8028017  T
Q  209 a 209  Q
    |    
T  8028016 a 8028016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 7 - 209
Target Start/End: Complemental strand, 8196507 - 8196305
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| | |||| || ||||||| ||||||||| ||  ||    
T  8196507 tgtgatttcatcatataagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtctttgtgcggtgttcatttgattcttacaga 8196408  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    |||||||||||||||||||| |||||| |||||||||||| |||||||||||||||| |||||||||||||||||||||||||  |||||||||||||||    
T  8196407 aagatcgattattcaatcaacgatttgggcgtcaacgttgtagatccggaggccatgtatattccggtcactttaattttatcgcatatttttgtaggca 8196308  T
Q  207 tta 209  Q
    |||    
T  8196307 tta 8196305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 11 - 209
Target Start/End: Original strand, 25064217 - 25064415
Alignment:
Q  11 atttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaaga 110  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| | | || || ||||||| ||||||||||||||||||||    
T  25064217 atttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgttttcgtgcggtgttcatttgattcatattgaaaga 25064316  T
Q  111 tcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| ||| |||| || | ||||||||||| |||||||||||||||||||||||    
T  25064317 tcgattgttcaatcaaagatttgagcgtcaacgttgcagatccggaggcaatggatatgcccggcactttaatttcatcatatatttttgtaggcatta 25064415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 7 - 209
Target Start/End: Original strand, 35001567 - 35001769
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| | ||||  | ||||||| |||| |||| ||||||    
T  35001567 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattcctattga 35001666  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    |||||| ||||||||||||||||||||  ||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  35001667 aagatcaattattcaatcaaagatttggacgtcaacgttgcagatccgaaggtcatgaatattccggtgactttaattttatcatatatttttgtaggca 35001766  T
Q  207 tta 209  Q
    |||    
T  35001767 tta 35001769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 11 - 209
Target Start/End: Complemental strand, 7876140 - 7875942
Alignment:
Q  11 atttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaaga 110  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||| |||||||||||||  |||||| || ||||||| | |||||||||||| |||||    
T  7876140 atttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcgacgttgtttgattttccatcttcgtgcggtgttcaattgattcatattaaaaga 7876041  T
Q  111 tcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||| ||| |||||||| |||||||||||| |||||||||||||||||||||||    
T  7876040 tcgattgttcaatcaaagatttgggcgtcaacgttgcagatccggaggcaatggatattccgatcactttaatttcatcatatatttttgtaggcatta 7875942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 7 - 209
Target Start/End: Complemental strand, 17237385 - 17237184
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||| |||||| | ||||  | ||||||| || |||||||| ||||    
T  17237385 tgtgatttcagcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgctgttggatttcccgtcttcttgcggtgttcatctgattcattttga 17237286  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    | ||||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  17237285 a-gatcgattattcaatcaaagatttgggtgtcaacgttgcagatccggaggccatggatattccggtcactttaattttatcatatatttttgtaggca 17237187  T
Q  207 tta 209  Q
    |||    
T  17237186 tta 17237184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 27 - 209
Target Start/End: Original strand, 33110608 - 33110790
Alignment:
Q  27 gtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaa 126  Q
    ||||||||||||||||| |||| |||||||| ||||||||||||||| |||| || ||||||| |||||||||||||| |||||||||||||||||||||    
T  33110608 gtggtggtttgttgttcatcgtcttgtgcggtgttgtttgatttctcgtcttcgtgcggtgttcatttgattcatattaaaagatcgattattcaatcaa 33110707  T
Q  127 agatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    ||||||  |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  33110708 agattttggcgtcaacgttgcagatccggaggtcatggatattccggtcactttaattttatcatatatttttgtaggcatta 33110790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 7 - 209
Target Start/End: Original strand, 10228656 - 10228858
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||| |||||||| |||||||||||||||||| ||||||||||||||||| |||| | ||||  |  |||||| |||| |||  ||||||    
T  10228656 tgtgatttcatcatttaagtgtgatggtttgttgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgtggtgttcattttatttctattga 10228755  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    ||||| |||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  10228756 aagattgattattcaatcaaagatttggacgtcaacgttgcagatccggaggccatggatattccggtgactttaattttatcatatatttttgtaggca 10228855  T
Q  207 tta 209  Q
    |||    
T  10228856 tta 10228858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 7 - 209
Target Start/End: Original strand, 4468535 - 4468737
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||| |||||||||||||||||| |||||||| |||||| ||||||||||||||  | ||||  | | ||||| |||||||| |||||||    
T  4468535 tgtgatttcatcatataagtgtggtggtttgttattcgtcgtcttgtgcagcgttgtttgattttccgtcttcatgcagtgttcatttgatttatattga 4468634  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    | |||||||||||||||||||||||||  |||||||||||||||||| |||| |||| ||||||||| ||||||||||||||||||||||||||||||||    
T  4468635 aggatcgattattcaatcaaagatttggccgtcaacgttgcagatccagaggtcatggatattccggccactttaattttatcatatatttttgtaggca 4468734  T
Q  207 tta 209  Q
    |||    
T  4468735 tta 4468737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 12 - 209
Target Start/End: Original strand, 8496949 - 8497147
Alignment:
Q  12 tttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||||| |||||| |||| ||||||||||||| | |||||||||||||||||||||||| |||| || ||||||| |||||||||||||||||||||    
T  8496949 tttcatcatttaagtgcggtgatttgttgttcgtcatcttgtgcggcgttgtttgatttctcgtcttcgtgcggtgttcatttgattcatattgaaagat 8497048  T
Q  112 cgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatata-tttttgtaggcatta 209  Q
    ||||| |||||||||||||||| ||| ||||||||||||||| || || ||| ||||||||||||||||||||| |||||||| |||||||||||||||    
T  8497049 cgattcttcaatcaaagatttgggcggcaacgttgcagatcctgatgcaatggatattccggtcactttaatttcatcatatattttttgtaggcatta 8497147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 7 - 199
Target Start/End: Original strand, 12165817 - 12166008
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| | | ||  | ||||||| |||| |||||||||||    
T  12165817 tgtggttttatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgttcgatttcacgt-ttcttgcggtgttcatttaattcatattga 12165915  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatattttt 199  Q
    ||||| |||||||||||| |||||||| |||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||||||    
T  12165916 aagattgattattcaatcgaagatttgggcgtcaacgttgcagatccggatgctatggatattccggtcactttaattttatcatatattttt 12166008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 8 - 209
Target Start/End: Complemental strand, 28635220 - 28635011
Alignment:
Q  8 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaa 107  Q
    |||||||| |||| | ||||||| ||||||||||||||||| |||| ||| ||||||||||||||| | |   | ||||||| |||||||||||||||||    
T  28635220 gtgatttcgtcatttgagtgtggcggtttgttgttcgtcgtcttgtacggtgttgtttgatttctcgtatcgttgcggtgttcatttgattcatattgaa 28635121  T
Q  108 agatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggc--------catgaatattccggtcactttaattttatcatatattttt 199  Q
    ||||  |||||||||||||||||||||||||||| |||||||||||||||||        |||| ||| ||||||||||||||||||||||| |||||||    
T  28635120 agattaattattcaatcaaagatttgagcgtcaatgttgcagatccggaggcatggaagacatggatactccggtcactttaattttatcatgtattttt 28635021  T
Q  200 gtaggcatta 209  Q
    ||||||||||    
T  28635020 gtaggcatta 28635011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 8 - 209
Target Start/End: Original strand, 25337548 - 25337744
Alignment:
Q  8 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaa 107  Q
    |||||||| |||||  ||||||||||| ||||||||||||| ||| |||| |||||||||||| || ||||  | ||||||| |||||||||||||||||    
T  25337548 gtgatttcgtcatccgagtgtggtggtgtgttgttcgtcgtcttgcgcggtgttgtttgatttttcgtcttgttgcggtgttcatttgattcatattgaa 25337647  T
Q  108 agatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcat 207  Q
    |||||||||||    | |||||||||||| |||| |||||| |||| |||| |||   |||||| ||||| |||||||||||||||||||||||||||||    
T  25337648 agatcgattat----tgaaagatttgagcatcaaggttgcaaatccagagg-cattggtattccagtcaccttaattttatcatatatttttgtaggcat 25337742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 114 - 209
Target Start/End: Original strand, 7027947 - 7028042
Alignment:
Q  114 attattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  7027947 attattcaatcaaagatttgagcgtcaaccttgtagatccggaggccatagatattccggtcactttaattttatcatatatttttgtaggcatta 7028042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 107 - 209
Target Start/End: Complemental strand, 16892816 - 16892714
Alignment:
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    |||||| ||| |||||| ||||||||  ||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||    
T  16892816 aagatcaattgttcaattaaagatttaggcgtcaacgttgcagatccggaggcaatggatattccggtcactttaatttcatcatatatttttgtaggca 16892717  T
Q  207 tta 209  Q
    |||    
T  16892716 tta 16892714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 8 - 209
Target Start/End: Complemental strand, 33543719 - 33543522
Alignment:
Q  8 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaa 107  Q
    |||||||| |||||| | | ||||||| ||||||||||||| |||||||||||||||||||||    ||||  | ||||||| |||  ||||||||||||    
T  33543719 gtgatttcgtcatctgattatggtggtgtgttgttcgtcgtcttgtgcggcgttgtttgattttctgtcttgttgcggtgttcatt--attcatattgaa 33543622  T
Q  108 agatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcat 207  Q
    ||||||| |||||||||||| ||||| | ||||| |||||||||||||| | ||||  |||||||  || ||||||||||| |||||||||||||| |||    
T  33543621 agatcgactattcaatcaaaaatttgggtgtcaatgttgcagatccggaag-catgggtattccgacca-tttaattttattatatatttttgtagacat 33543524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 123 - 209
Target Start/End: Original strand, 17334846 - 17334932
Alignment:
Q  123 tcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    ||||||||||| | ||||||||||||||||||||||| ||| ||||||| ||||||||||||| |||||||||||||||||||||||    
T  17334846 tcaaagatttgggtgtcaacgttgcagatccggaggcaatggatattccagtcactttaatttcatcatatatttttgtaggcatta 17334932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 8 - 209
Target Start/End: Complemental strand, 4352095 - 4351903
Alignment:
Q  8 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaa 107  Q
    |||||||| |||||  ||||||||| | ||||||||||||| || || |||||| ||||||||| | || | || |||| || |||| ||||||||||||    
T  4352095 gtgatttcgtcatccgagtgtggtgatgtgttgttcgtcgtcttatgtggcgttatttgatttcccgtcatggtgcggtattcatttaattcatattgaa 4351996  T
Q  108 agatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcat 207  Q
    |||||||||||| |||||||||||||  |||||||        |||||| | ||||  |||| | ||| ||||||| |||||||||||||||||||||||    
T  4351995 agatcgattatttaatcaaagatttggacgtcaac--------tccggaag-catgggtatttcagtcgctttaatgttatcatatatttttgtaggcat 4351905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 34489228 - 34489327
Alignment:
Q  8 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaa 107  Q
    ||||||||||||||  ||||||||||| ||||||||||||| ||||||| |||||||||||||| ||| ||  |  |||||| |||||||||||||||||    
T  34489228 gtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttgtgcgacgttgtttgatttcccatattgttgtggtgttcatttgattcatattgaa 34489327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 24 - 193
Target Start/End: Complemental strand, 1704233 - 1704065
Alignment:
Q  24 agtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaat 123  Q
    ||||||||| | ||||||||||  | ||||||  | || ||| ||||||| ||||  | ||||||| ||||| |||  || |||| ||||||||||||||    
T  1704233 agtgtggtgttgtgttgttcgtgatcttgtgcaacattatttaatttctcgtcttgttgcggtgttcatttggttctaatcgaaatatcgattattcaat 1704134  T
Q  124 caaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatat 193  Q
     || ||||||| | ||||||||| ||||||||| | |||||||||||| |||||||||||| ||||||||    
T  1704133 aaatgatttgaacatcaacgttgtagatccggatg-catgaatattccagtcactttaattgtatcatat 1704065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 7027805 - 7027874
Alignment:
Q  1 tttccgtgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgattt 70  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||| |||| ||| ||||||||||||    
T  7027805 tttccctgtgatttcatcatttaagtgtggtggtttgttgttcgtcgtcttgtacggagttgtttgattt 7027874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 148 - 202
Target Start/End: Original strand, 20619585 - 20619639
Alignment:
Q  148 agatccggaggccatgaatattccggtcactttaattttatcatatatttttgta 202  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  20619585 agatccggagaccatggatattccggtcactttaattttatcatatatttttgta 20619639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 148 - 209
Target Start/End: Complemental strand, 12059732 - 12059671
Alignment:
Q  148 agatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||| ||||    
T  12059732 agatccggagaccatggatattccggtcactttaattttatcatatttttttgtaggaatta 12059671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 11 - 70
Target Start/End: Original strand, 17334759 - 17334818
Alignment:
Q  11 atttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgattt 70  Q
    ||||||| |||||||||||||| |||||||| |||||| |||||||||||||||||||||    
T  17334759 atttcataatctaagtgtggtgatttgttgtacgtcgtcttgtgcggcgttgtttgattt 17334818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 84 - 193
Target Start/End: Original strand, 25398617 - 25398725
Alignment:
Q  84 ggtgtttatttgattcat-attgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaa 182  Q
    |||||||||||| ||| | ||||||| || |||||||||||||| |||||| ||||||||||||| |||||||| | ||| | | ||||| |||||||||    
T  25398617 ggtgtttatttggttctttattgaaa-attgattattcaatcaatgatttgggcgtcaacgttgctgatccgga-gacataagttttccgatcactttaa 25398714  T
Q  183 ttttatcatat 193  Q
    |||||||||||    
T  25398715 ttttatcatat 25398725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 112
Target Start/End: Original strand, 30493491 - 30493595
Alignment:
Q  8 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaa 107  Q
    |||||||| || ||| |||| |||| | ||||||||||||| |||||| |||||||||||||||  |||||  |  ||||||  |||| |||||||||||    
T  30493491 gtgatttcctcgtctgagtgcggtgttgtgttgttcgtcgtcttgtgcagcgttgtttgatttcgtatcttgttctggtgttcgtttggttcatattgaa 30493590  T
Q  108 agatc 112  Q
    |||||    
T  30493591 agatc 30493595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 60 - 126
Target Start/End: Original strand, 9426873 - 9426939
Alignment:
Q  60 ttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaa 126  Q
    ||||||||||| |||||||  || | ||||||||||||||||||||||||||   ||||||||||||    
T  9426873 ttgtttgatttttcatcttgttatgatgtttatttgattcatattgaaagataagttattcaatcaa 9426939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 26588567 - 26588499
Alignment:
Q  44 gtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatc 112  Q
    ||||| |||||||||||||||||||||| | ||||  | |||||||  |||| ||||||||||||||||    
T  26588567 gtcgtcttgtgcggcgttgtttgatttcccgtcttgttgcggtgttcgtttggttcatattgaaagatc 26588499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 108
Target Start/End: Original strand, 31296807 - 31296879
Alignment:
Q  36 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaa 108  Q
    |||||||| || | |||||||||||||||||||||  ||||||  | | ||||| ||||||||||||||||||    
T  31296807 tgttgttcatcatcttgtgcggcgttgtttgattttgcatcttgttgcagtgttcatttgattcatattgaaa 31296879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 111
Target Start/End: Original strand, 31705321 - 31705369
Alignment:
Q  63 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||||||| ||||||| ||||||||||||||||||  |||||||||    
T  31705321 tttgatttctcgtcttagtgcggtgtttatttgattcaggttgaaagat 31705369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 8102709 - 8102789
Alignment:
Q  36 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatct----tagtacggtgtttatttgattcatattgaaagatc 112  Q
    |||| |||||||| |||||||||||||||||||||| |||||    | || |||||||| |||| ||| ||||||||||||    
T  8102709 tgtttttcgtcgtcttgtgcggcgttgtttgatttcgcatcttttgttgtgcggtgtttgtttggttcgtattgaaagatc 8102789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 209
Target Start/End: Original strand, 34489357 - 34489399
Alignment:
Q  166 tattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    |||||||||||||||||||||||| ||||||||||||| |||||    
T  34489357 tattccggtcactttaattttatc-tatatttttgtagccatta 34489399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 111
Target Start/End: Complemental strand, 19402777 - 19402727
Alignment:
Q  61 tgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||||||| | ||||||| ||||||||||||||||||  |||||||||    
T  19402777 tgtttgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagat 19402727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 70
Target Start/End: Original strand, 22571461 - 22571495
Alignment:
Q  36 tgttgttcgtcgtattgtgcggcgttgtttgattt 70  Q
    ||||||||||||| |||||||||||||||||||||    
T  22571461 tgttgttcgtcgtcttgtgcggcgttgtttgattt 22571495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 111
Target Start/End: Complemental strand, 23638087 - 23638037
Alignment:
Q  61 tgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||||||| | ||||||| ||||||||||||||||||  |||||||||    
T  23638087 tgtttgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagat 23638037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 193
Target Start/End: Original strand, 8266716 - 8266792
Alignment:
Q  116 tattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatat 193  Q
    ||||||||||| |||||| |||||||| ||| ||| ||||||| || |  ||||||  ||||||||||||||||||||    
T  8266716 tattcaatcaatgatttgggcgtcaacattgtagacccggagg-caagggtattccaatcactttaattttatcatat 8266792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 153
Target Start/End: Original strand, 546113 - 546149
Alignment:
Q  117 attcaatcaaagatttgagcgtcaacgttgcagatcc 153  Q
    |||||||||| |||||| |||||||||||||||||||    
T  546113 attcaatcaatgatttgggcgtcaacgttgcagatcc 546149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 111
Target Start/End: Complemental strand, 1915139 - 1915103
Alignment:
Q  75 tcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||||||||||||||||||||||  |||||||||    
T  1915139 tcttagtacggtgtttatttgattcaggttgaaagat 1915103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 153
Target Start/End: Original strand, 14801909 - 14801945
Alignment:
Q  117 attcaatcaaagatttgagcgtcaacgttgcagatcc 153  Q
    |||||||||| |||||| |||||||||||||||||||    
T  14801909 attcaatcaatgatttgggcgtcaacgttgcagatcc 14801945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 111
Target Start/End: Original strand, 23654406 - 23654454
Alignment:
Q  63 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||||| | ||||||| ||||||||||||||||||  |||||||||    
T  23654406 tttgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagat 23654454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 111
Target Start/End: Original strand, 29284913 - 29284957
Alignment:
Q  67 atttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||| ||||||| ||||||||||||||||||  |||||||||    
T  29284913 atttctcgtcttagtgcggtgtttatttgattcaagttgaaagat 29284957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 116
Target Start/End: Complemental strand, 31575638 - 31575530
Alignment:
Q  8 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaa 107  Q
    |||||||| |||||| | || |||| | |||||||| ||||  |||||| |||||||||||||||| ||||  | || ||||  | |||||| |||||||    
T  31575638 gtgatttcgtcatctgaatgcggtgttatgttgttcatcgtcatgtgcgacgttgtttgatttctcgtcttgttgcgatgttcgtctgattcctattgaa 31575539  T
Q  108 agatcgatt 116  Q
    | |||||||    
T  31575538 aaatcgatt 31575530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 193
Target Start/End: Complemental strand, 31852197 - 31852126
Alignment:
Q  121 aatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatat 193  Q
    |||||| ||||||| |||||| |||||||||||||| | ||||| ||||| ||| | || |||||||||||||    
T  31852197 aatcaatgatttgaacgtcaaagttgcagatccggaag-catgagtattctggtgatttaaattttatcatat 31852126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 139; Significance: 7e-73; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 7 - 209
Target Start/End: Complemental strand, 16420 - 16218
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||  | || |  ||||||| |||||||||||||| |    
T  16420 tgtgatttcatcatctaagtgtggtggtttgttgtttgtcgtcttgtgcggcgttgtttgatatcttgttttcgcgcggtgttgatttgattcatattaa 16321  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    || |||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||    
T  16320 aatatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggaggctatggatattccggtcactttaattttattatatatttttgtaggca 16221  T
Q  207 tta 209  Q
    |||    
T  16220 tta 16218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 133; Significance: 3e-69; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 7 - 207
Target Start/End: Complemental strand, 201472 - 201273
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    ||||||||||||||||||||||| ||||||||||||||| || |||||||||| ||||||||||| | ||||  |  |||||| ||||||||||||||||    
T  201472 tgtgatttcatcatctaagtgtgatggtttgttgttcgtagtcttgtgcggcgctgtttgatttcacgtcttcttgtggtgttcatttgattcatattga 201373  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    | ||||||||||||||||||||||||| |||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  201372 a-gatcgattattcaatcaaagatttgggcgtcaacgttgtagatccgtaggccatggatattccggtcactttaattttatcatatatttttgtaggca 201274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 7 - 209
Target Start/End: Original strand, 5375 - 5577
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||| |||||||| |||||||||||||||||| ||||||||||||||||| |||| | ||||  |  |||||| |||| |||  ||||||    
T  5375 tgtgatttcatcatttaagtgtgatggtttgttgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgtggtgttcattttatttctattga 5474  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    ||||| |||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  5475 aagattgattattcaatcaaagatttggacgtcaacgttgcagatccggaggccatggatattccggtgactttaattttatcatatatttttgtaggca 5574  T
Q  207 tta 209  Q
    |||    
T  5575 tta 5577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 7 - 207
Target Start/End: Complemental strand, 83535 - 83338
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||||||||||||||||||||||||| |||   |||||||||||||||||||||||| |||| || |||| || ||||||||||||||||    
T  83535 tgtgatttcatcatctaagtgtggtggtttgttgtttgtc---ttgtgcggcgttgtttgatttctcgtcttcgtgcggtattcatttgattcatattga 83439  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    |||||||||||||||||| ||||||||  |||||||||||||||| | |||| |||| || |||||||||||||||||||| |||| |||||||||||||    
T  83438 aagatcgattattcaatcgaagatttggccgtcaacgttgcagattcagaggtcatggattttccggtcactttaattttaccatacatttttgtaggca 83339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0426 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 18 - 209
Target Start/End: Original strand, 6293 - 6484
Alignment:
Q  18 catctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgatta 117  Q
    ||||| ||||||||||||||||||||||||| |||| |||| |||||||||||| | ||||  | ||||||| |||||||||||||||||||||||||||    
T  6293 catcttagtgtggtggtttgttgttcgtcgtcttgtacggcattgtttgatttcccgtcttcttgcggtgttcatttgattcatattgaaagatcgatta 6392  T
Q  118 ttcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatta 209  Q
    |||||||||| ||||| || ||||||||||||||||  |||||||||||| ||||||||||||| |||||||||||||||||||| ||||||    
T  6393 ttcaatcaaatatttgggcatcaacgttgcagatccaaaggccatgaataatccggtcactttagttttatcatatatttttgtatgcatta 6484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 7 - 209
Target Start/End: Complemental strand, 361899 - 361697
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattga 106  Q
    |||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||   |||| || | ||||| ||||||||| ||  ||    
T  361899 tgtgatttcatcatttaagtatggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttcctgtcttggtgcagtgttcatttgattcttacaga 361800  T
Q  107 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggca 206  Q
    |||||  ||||||||||||||||||||  ||||||||||| |||||||||||||||| ||| ||| |||||||||||||| |||||||||||||||||||    
T  361799 aagattaattattcaatcaaagatttggacgtcaacgttgtagatccggaggccatggatactccagtcactttaattttctcatatatttttgtaggca 361700  T
Q  207 tta 209  Q
    |||    
T  361699 tta 361697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 106; Significance: 4e-53; HSPs: 2)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 84 - 209
Target Start/End: Original strand, 8745 - 8870
Alignment:
Q  84 ggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaat 183  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||| ||||||||||||    
T  8745 ggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggagaccatggatattctggtcactttaat 8844  T
Q  184 tttatcatatatttttgtaggcatta 209  Q
    ||||||||||||||||||||||||||    
T  8845 tttatcatatatttttgtaggcatta 8870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 42
Target Start/End: Original strand, 8696 - 8731
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgtt 42  Q
    ||||||||||||||||||||||||||||||||||||    
T  8696 tgtgatttcatcatctaagtgtggtggtttgttgtt 8731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 36 - 155
Target Start/End: Complemental strand, 36758 - 36639
Alignment:
Q  36 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgag 135  Q
    ||||||||||||| |||||||| ||||||||||||||  ||||  |  |||| ||||||| ||||||||||||||| ||  ||||||||||  |||||||    
T  36758 tgttgttcgtcgtcttgtgcggagttgtttgatttcttttcttgttgtggtgattatttggttcatattgaaagattgacaattcaatcaataatttgag 36659  T
Q  136 cgtcaacgttgcagatccgg 155  Q
    ||||||| ||||||||||||    
T  36658 cgtcaacattgcagatccgg 36639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 91 - 208
Target Start/End: Complemental strand, 34796 - 34681
Alignment:
Q  91 atttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatca 190  Q
    |||||||||||||||||||||| | ||| ||||||| |||||  |||||||||||||| ||||||| | ||||| | |||| ||||||||||||||||||    
T  34796 atttgattcatattgaaagatctactatgcaatcaatgatttatgcgtcaacgttgcaaatccgga-gacatgagttttccagtcactttaattttatca 34698  T
Q  191 tatatttttgtaggcatt 208  Q
    ||| | ||||||||||||    
T  34697 tat-tatttgtaggcatt 34681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 20493 - 20433
Alignment:
Q  10 gatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgattt 70  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  20493 gatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcgacgttgtttgattt 20433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 26 - 128
Target Start/End: Original strand, 453928 - 454030
Alignment:
Q  26 tgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctca-tcttagtacggtgtttatttgattcatattgaaagatcgattattcaatc 124  Q
    |||| |||| ||||||||||||| ||| ||||||||||||||||| ||| ||||  | ||||||| |||||| |||||||||||||||||||||||||||    
T  453928 tgtgatggtgtgttgttcgtcgtcttgggcggcgttgtttgattt-tcagtcttgttgcggtgttcatttgactcatattgaaagatcgattattcaatc 454026  T
Q  125 aaag 128  Q
    ||||    
T  454027 aaag 454030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 209
Target Start/End: Original strand, 454056 - 454092
Alignment:
Q  173 gtcactttaattttatcatatatttttgtaggcatta 209  Q
    |||||||||||||||| ||||||||||||| ||||||    
T  454056 gtcactttaattttattatatatttttgtaagcatta 454092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 108
Target Start/End: Original strand, 6016 - 6088
Alignment:
Q  36 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatcttagtacggtgtttatttgattcatattgaaa 108  Q
    ||||||||||||| |||||||||||||||||||||| | | ||  | ||||||| ||||| ||||||||||||    
T  6016 tgttgttcgtcgtcttgtgcggcgttgtttgatttcgcgtattgttgcggtgttcatttggttcatattgaaa 6088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 15451 - 15505
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgtt 61  Q
    ||||||||| ||||||||||| |||| | ||||||||||||| ||||||||||||    
T  15451 tgtgatttcgtcatctaagtgcggtgttgtgttgttcgtcgtcttgtgcggcgtt 15505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 208
Target Start/End: Original strand, 50857 - 50946
Alignment:
Q  117 attcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcatt 208  Q
    |||||| ||| ||||||  ||||||||||||||||||||| | |||| ||||| |||| |||| | ||||||||||| | ||||||||||||    
T  50857 attcaaccaatgatttggacgtcaacgttgcagatccggaag-catggatatttcggtgacttaagttttatcatat-tatttgtaggcatt 50946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0888 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 78
Target Start/End: Complemental strand, 1785 - 1743
Alignment:
Q  36 tgttgttcgtcgtattgtgcggcgttgtttgatttctcatctt 78  Q
    ||||||||||||| |||| ||||||||||||||||| ||||||    
T  1785 tgttgttcgtcgtcttgtccggcgttgtttgatttcgcatctt 1743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 111
Target Start/End: Original strand, 3054 - 3104
Alignment:
Q  61 tgtttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||||||| | | ||||||||||||||||||||||||  |||||||||    
T  3054 tgtttgatttcccgttttagtacggtgtttatttgattcaggttgaaagat 3104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 32876 - 32822
Alignment:
Q  7 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgtt 61  Q
    ||||||||| || |||||||| || | ||||||||||||||| ||||||||||||    
T  32876 tgtgatttcgtcgtctaagtgcggcgttttgttgttcgtcgtcttgtgcggcgtt 32822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 111
Target Start/End: Original strand, 131 - 179
Alignment:
Q  63 tttgatttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||||||| ||||||||| | ||||||||||||||||  |||||||||    
T  131 tttgatttcccatcttagtgctgtgtttatttgattcaggttgaaagat 179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 193
Target Start/End: Complemental strand, 31282 - 31207
Alignment:
Q  117 attcaatcaaagatttgagcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatat 193  Q
    |||||||||| ||||||||| |||| |||||||||||||| | ||||  |||| |||| ||||  ||||||||||||    
T  31282 attcaatcaacgatttgagcatcaatgttgcagatccggaag-catgggtatttcggtgacttagattttatcatat 31207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 111
Target Start/End: Original strand, 74324 - 74368
Alignment:
Q  67 atttctcatcttagtacggtgtttatttgattcatattgaaagat 111  Q
    ||||| ||||||||||||| ||||||||||||||  |||||||||    
T  74324 atttcacatcttagtacggagtttatttgattcaggttgaaagat 74368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University