View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10140A_low_380 (Length: 231)
Name: NF10140A_low_380
Description: NF10140A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10140A_low_380 |
 | |
|
| [»] scaffold0135 (7 HSPs) |
| | |
|
| [»] scaffold0959 (1 HSPs) |
| | |
|
| [»] scaffold0753 (2 HSPs) |
| | |
|
| [»] scaffold0091 (1 HSPs) |
| | |
|
Alignment Details
Target: chr4 (Bit Score: 191; Significance: 1e-104; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 18 - 208
Target Start/End: Original strand, 9275639 - 9275829
Alignment:
| Q |
18 |
catcactattcaagataagaatagaaatcaagcaaagcaatttcgacattgagaaaggtttttcatgtctctaatagaacattctcgtcacagaataatc |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9275639 |
catcactattcaagataagaatagaaatcaagcaaagcaatttcgacattgagaaaggtttttcatgtctctaatagaacattctcgtcacagaataatc |
9275738 |
T |
|
| Q |
118 |
cttgtgaagacgataatcttaatactaaattacttaagcaattggtgcacttgccagatttatcatcatctttcaaaattttgtttaaaca |
208 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9275739 |
cttgtgaagacgataatcttaatactaaattacttaagcaattggtgcacttgccagatttatcatcatctttcaaaattttgtttaaaca |
9275829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 164; E-Value: 8e-88
Query Start/End: Original strand, 18 - 209
Target Start/End: Original strand, 9208452 - 9208643
Alignment:
| Q |
18 |
catcactattcaagataagaatagaaatcaagcaaagcaatttcgacattgagaaaggtttttcatgtctctaatagaacattctcgtcacagaataatc |
117 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9208452 |
catcactattcaagataagaatagaaataaagcaaagcaatttcgacattgagaaaagtttttcatgtctctaatagaacattctcgtcacagaataatc |
9208551 |
T |
|
| Q |
118 |
cttgtgaagacgataatcttaatactaaattacttaagcaattggtgcacttgccagatttatcatcatctttcaaaattttgtttaaacag |
209 |
Q |
| |
|
|||| | |||||||||||||| |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9208552 |
cttgcggagacgataatcttactactaaattacttaagcagttggtgcatttgccagatttatcatcatctttcaaaattttgtttaaacag |
9208643 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 18 - 208
Target Start/End: Original strand, 9204233 - 9204423
Alignment:
| Q |
18 |
catcactattcaagataagaatagaaatcaagcaaagcaatttcgacattgagaaaggtttttcatgtctctaatagaacattctcgtcacagaataatc |
117 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
9204233 |
catcactattcaagataagaatagaaataaagcaaagcaatttcgacattgagaaaagtttttcatgtctcttatagaacattctcgtcacagaataatc |
9204332 |
T |
|
| Q |
118 |
cttgtgaagacgataatcttaatactaaattacttaagcaattggtgcacttgccagatttatcatcatctttcaaaattttgtttaaaca |
208 |
Q |
| |
|
|||| | ||||||| |||||| |||||||||||||||||| |||||||| || |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9204333 |
cttgcggagacgattatcttactactaaattacttaagcagttggtgcatttaccagatttatcatcatctttcaaaattttgtttaaaca |
9204423 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 34 - 209
Target Start/End: Original strand, 9244082 - 9244249
Alignment:
| Q |
34 |
aagaatagaaatcaagcaaagcaatttcgacattgagaaaggtttttcatgtctctaatagaacattctcgtcacagaataatccttgtgaagacgataa |
133 |
Q |
| |
|
||||||||||||||| ||||||||||| ||||||||||||||||| |||| ||||||||||||||| | || |||| ||| |||||||||| |
|
|
| T |
9244082 |
aagaatagaaatcaaacaaagcaattttgacattgagaaaggtttctcat---------agaacattctcgtcatacaacaatcattgcaaagacgataa |
9244172 |
T |
|
| Q |
134 |
tcttaatactaaattacttaagcaatt-ggtgcacttgccagatttatcatcatctttcaaaattttgtttaaacag |
209 |
Q |
| |
|
|||||||| |||||||||||| || || ||||||||| ||| ||||||||||||||||||||||||||||| ||||| |
|
|
| T |
9244173 |
tcttaataataaattacttaatcagtttggtgcactttccaaatttatcatcatctttcaaaattttgtttgaacag |
9244249 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 83 - 203
Target Start/End: Original strand, 9286046 - 9286166
Alignment:
| Q |
83 |
tgtctctaatagaacattctcgtcacagaataatccttgtgaagacgataatcttaatactaaattacttaagcaattg-gtgcacttgccagatttatc |
181 |
Q |
| |
|
||||||||||||||| || || ||| | || |||||||||| | |||||||||||| || |||||||||||| || || ||||| |||||| ||||||| |
|
|
| T |
9286046 |
tgtctctaatagaac-ttatcatcatacaacaatccttgtgtacacgataatcttactattaaattacttaaacattttcgtgcatttgccaaatttatc |
9286144 |
T |
|
| Q |
182 |
atcatctttcaaaattttgttt |
203 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
9286145 |
atcatctttcaaaattttgttt |
9286166 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 34 - 100
Target Start/End: Original strand, 7580761 - 7580827
Alignment:
| Q |
34 |
aagaatagaaatcaagcaaagcaatttcgacattgagaaaggtttttcatgtctctaatagaacatt |
100 |
Q |
| |
|
||||||||||||||| ||||||||||| ||| ||||||||||||| ||||||| ||||||||||||| |
|
|
| T |
7580761 |
aagaatagaaatcaaacaaagcaattttgactttgagaaaggtttctcatgtccctaatagaacatt |
7580827 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0135 (Bit Score: 155; Significance: 2e-82; HSPs: 7)
Name: scaffold0135
Description:
Target: scaffold0135; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 18 - 208
Target Start/End: Original strand, 2316 - 2506
Alignment:
| Q |
18 |
catcactattcaagataagaatagaaatcaagcaaagcaatttcgacattgagaaaggtttttcatgtctctaatagaacattctcgtcacagaataatc |
117 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
2316 |
catcactattcaagataagaatagaaataaagcaaagcaatttcgacattgagaaaagtttttcatgtctcttatagaacattctcgtcacagaataatc |
2415 |
T |
|
| Q |
118 |
cttgtgaagacgataatcttaatactaaattacttaagcaattggtgcacttgccagatttatcatcatctttcaaaattttgtttaaaca |
208 |
Q |
| |
|
|||| | ||||||| |||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2416 |
cttgcggagacgattatcttactactaaattacttaagcagttggtgcatttgccagatttatcatcatctttcaaaattttgtttaaaca |
2506 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0135; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 18 - 208
Target Start/End: Original strand, 6531 - 6721
Alignment:
| Q |
18 |
catcactattcaagataagaatagaaatcaagcaaagcaatttcgacattgagaaaggtttttcatgtctctaatagaacattctcgtcacagaataatc |
117 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
6531 |
catcactattcaagataagaatagaaataaagcaaagcaatttcgacattgagaaaagtttttcatgtctcttatagaacattctcgtcacagaataatc |
6630 |
T |
|
| Q |
118 |
cttgtgaagacgataatcttaatactaaattacttaagcaattggtgcacttgccagatttatcatcatctttcaaaattttgtttaaaca |
208 |
Q |
| |
|
|||| | ||||||| |||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6631 |
cttgcggagacgattatcttactactaaattacttaagcagttggtgcatttgccagatttatcatcatctttcaaaattttgtttaaaca |
6721 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0135; HSP #3
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 18 - 208
Target Start/End: Original strand, 10746 - 10936
Alignment:
| Q |
18 |
catcactattcaagataagaatagaaatcaagcaaagcaatttcgacattgagaaaggtttttcatgtctctaatagaacattctcgtcacagaataatc |
117 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
10746 |
catcactattcaagataagaatagaaataaagcaaagcaatttcgacattgagaaaagtttttcatgtctcttatagaacattctcgtcacagaataatc |
10845 |
T |
|
| Q |
118 |
cttgtgaagacgataatcttaatactaaattacttaagcaattggtgcacttgccagatttatcatcatctttcaaaattttgtttaaaca |
208 |
Q |
| |
|
|||| | ||||||| |||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10846 |
cttgcggagacgattatcttactactaaattacttaagcagttggtgcatttgccagatttatcatcatctttcaaaattttgtttaaaca |
10936 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0135; HSP #4
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 18 - 208
Target Start/End: Original strand, 14961 - 15151
Alignment:
| Q |
18 |
catcactattcaagataagaatagaaatcaagcaaagcaatttcgacattgagaaaggtttttcatgtctctaatagaacattctcgtcacagaataatc |
117 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
14961 |
catcactattcaagataagaatagaaataaagcaaagcaatttcgacattgagaaaagtttttcatgtctcttatagaacattctcgtcacagaataatc |
15060 |
T |
|
| Q |
118 |
cttgtgaagacgataatcttaatactaaattacttaagcaattggtgcacttgccagatttatcatcatctttcaaaattttgtttaaaca |
208 |
Q |
| |
|
|||| | ||||||| |||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15061 |
cttgcggagacgattatcttactactaaattacttaagcagttggtgcatttgccagatttatcatcatctttcaaaattttgtttaaaca |
15151 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0135; HSP #5
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 18 - 208
Target Start/End: Original strand, 19176 - 19366
Alignment:
| Q |
18 |
catcactattcaagataagaatagaaatcaagcaaagcaatttcgacattgagaaaggtttttcatgtctctaatagaacattctcgtcacagaataatc |
117 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
19176 |
catcactattcaagataagaatagaaataaagcaaagcaatttcgacattgagaaaagtttttcatgtctcttatagaacattctcgtcacagaataatc |
19275 |
T |
|
| Q |
118 |
cttgtgaagacgataatcttaatactaaattacttaagcaattggtgcacttgccagatttatcatcatctttcaaaattttgtttaaaca |
208 |
Q |
| |
|
|||| | ||||||| |||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19276 |
cttgcggagacgattatcttactactaaattacttaagcagttggtgcatttgccagatttatcatcatctttcaaaattttgtttaaaca |
19366 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0135; HSP #6
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 18 - 208
Target Start/End: Original strand, 23391 - 23581
Alignment:
| Q |
18 |
catcactattcaagataagaatagaaatcaagcaaagcaatttcgacattgagaaaggtttttcatgtctctaatagaacattctcgtcacagaataatc |
117 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
23391 |
catcactattcaagataagaatagaaataaagcaaagcaatttcgacattgagaaaagtttttcatgtctcttatagaacattctcgtcacagaataatc |
23490 |
T |
|
| Q |
118 |
cttgtgaagacgataatcttaatactaaattacttaagcaattggtgcacttgccagatttatcatcatctttcaaaattttgtttaaaca |
208 |
Q |
| |
|
|||| | ||||||| |||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23491 |
cttgcggagacgattatcttactactaaattacttaagcagttggtgcatttgccagatttatcatcatctttcaaaattttgtttaaaca |
23581 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0135; HSP #7
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 18 - 208
Target Start/End: Original strand, 27606 - 27796
Alignment:
| Q |
18 |
catcactattcaagataagaatagaaatcaagcaaagcaatttcgacattgagaaaggtttttcatgtctctaatagaacattctcgtcacagaataatc |
117 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
27606 |
catcactattcaagataagaatagaaataaagcaaagcaatttcgacattgagaaaagtttttcatgtctcttatagaacattctcgtcacagaataatc |
27705 |
T |
|
| Q |
118 |
cttgtgaagacgataatcttaatactaaattacttaagcaattggtgcacttgccagatttatcatcatctttcaaaattttgtttaaaca |
208 |
Q |
| |
|
|||| | ||||||| |||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27706 |
cttgcggagacgattatcttactactaaattacttaagcagttggtgcatttgccagatttatcatcatctttcaaaattttgtttaaaca |
27796 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0959 (Bit Score: 131; Significance: 4e-68; HSPs: 1)
Name: scaffold0959
Description:
Target: scaffold0959; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 34 - 208
Target Start/End: Original strand, 2902 - 3076
Alignment:
| Q |
34 |
aagaatagaaatcaagcaaagcaatttcgacattgagaaaggtttttcatgtctctaatagaacattctcgtcacagaataatccttgtgaagacgataa |
133 |
Q |
| |
|
||||||| ||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||| |
|
|
| T |
2902 |
aagaatacaaatcaaacaaaccaatttcgacattgaaaaaggtttttcatgtctctaatagaacattctcgtcacataataatccttgaggagacgataa |
3001 |
T |
|
| Q |
134 |
tcttaatactaaattacttaagcaattggtgcacttgccagatttatcatcatctttcaaaattttgtttaaaca |
208 |
Q |
| |
|
||||| |||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
3002 |
tcttactactaaattacttaagcagttggtacacttgccagatctatcatcatctttcaaaattttgtttaaaca |
3076 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0753 (Bit Score: 127; Significance: 1e-65; HSPs: 2)
Name: scaffold0753
Description:
Target: scaffold0753; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 34 - 208
Target Start/End: Complemental strand, 855 - 681
Alignment:
| Q |
34 |
aagaatagaaatcaagcaaagcaatttcgacattgagaaaggtttttcatgtctctaatagaacattctcgtcacagaataatccttgtgaagacgataa |
133 |
Q |
| |
|
||||||| ||||||| || |||||||| || |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
855 |
aagaataaaaatcaaacagagcaattttgagattgaggaaggtttttcatgtctctaatagaacattctcgtcacaaaataatccttgtggagacgataa |
756 |
T |
|
| Q |
134 |
tcttaatactaaattacttaagcaattggtgcacttgccagatttatcatcatctttcaaaattttgtttaaaca |
208 |
Q |
| |
|
|||| ||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||| |
|
|
| T |
755 |
tcttgatactaaattacttaagcagttggtgcacttgccagatttgtcatcatgtttcaaaattttgtttaaaca |
681 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0753; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 34 - 209
Target Start/End: Complemental strand, 2941 - 2774
Alignment:
| Q |
34 |
aagaatagaaatcaagcaaagcaatttcgacattgagaaaggtttttcatgtctctaatagaacattctcgtcacagaataatccttgtgaagacgataa |
133 |
Q |
| |
|
||||||||||||||| |||| |||||| ||||||||||||||||| |||| ||||||||||||||| | || |||| ||| |||||||||| |
|
|
| T |
2941 |
aagaatagaaatcaaacaaaacaattttgacattgagaaaggtttctcat---------agaacattctcgtcatacaacaatcattgcaaagacgataa |
2851 |
T |
|
| Q |
134 |
tcttaatactaaattacttaagcaatt-ggtgcacttgccagatttatcatcatctttcaaaattttgtttaaacag |
209 |
Q |
| |
|
|||||||||||||||| |||| || || ||||||||| ||| ||||||||||||||||||||||||||||| ||||| |
|
|
| T |
2850 |
tcttaatactaaattatttaatcagttcggtgcactttccaaatttatcatcatctttcaaaattttgtttcaacag |
2774 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0091 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0091
Description:
Target: scaffold0091; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 85
Target Start/End: Complemental strand, 15837 - 15787
Alignment:
| Q |
35 |
agaatagaaatcaagcaaagcaatttcgacattgagaaaggtttttcatgt |
85 |
Q |
| |
|
|||||||||||||| ||||| ||||| ||| ||||||||||||| |||||| |
|
|
| T |
15837 |
agaatagaaatcaatcaaaggaattttgactttgagaaaggtttctcatgt |
15787 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 100
Target Start/End: Complemental strand, 8980641 - 8980575
Alignment:
| Q |
34 |
aagaatagaaatcaagcaaagcaatttcgacattgagaaaggtttttcatgtctctaatagaacatt |
100 |
Q |
| |
|
||||||||||||||| |||| |||||| ||| ||||||||| ||| |||| || |||||||||||| |
|
|
| T |
8980641 |
aagaatagaaatcaaacaaaacaattttgactttgagaaagatttctcatatccataatagaacatt |
8980575 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 31; Significance: 0.00000002; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 85
Target Start/End: Original strand, 26649476 - 26649526
Alignment:
| Q |
35 |
agaatagaaatcaagcaaagcaatttcgacattgagaaaggtttttcatgt |
85 |
Q |
| |
|
|||||||||||||| ||||| ||||| ||| ||||||||||||| |||||| |
|
|
| T |
26649476 |
agaatagaaatcaatcaaaggaattttgactttgagaaaggtttctcatgt |
26649526 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 85
Target Start/End: Original strand, 26649628 - 26649678
Alignment:
| Q |
35 |
agaatagaaatcaagcaaagcaatttcgacattgagaaaggtttttcatgt |
85 |
Q |
| |
|
|||||||||||||| ||||| ||||| ||| ||||||||||||| |||||| |
|
|
| T |
26649628 |
agaatagaaatcaatcaaaggaattttgactttgagaaaggtttctcatgt |
26649678 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 85
Target Start/End: Original strand, 26921061 - 26921111
Alignment:
| Q |
35 |
agaatagaaatcaagcaaagcaatttcgacattgagaaaggtttttcatgt |
85 |
Q |
| |
|
|||||||||||||| ||||| ||||| ||| ||||||||||||| |||||| |
|
|
| T |
26921061 |
agaatagaaatcaatcaaaggaattttgactttgagaaaggtttctcatgt |
26921111 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 85
Target Start/End: Original strand, 26921213 - 26921263
Alignment:
| Q |
35 |
agaatagaaatcaagcaaagcaatttcgacattgagaaaggtttttcatgt |
85 |
Q |
| |
|
|||||||||||||| ||||| ||||| ||| ||||||||||||| |||||| |
|
|
| T |
26921213 |
agaatagaaatcaatcaaaggaattttgactttgagaaaggtttctcatgt |
26921263 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 85
Target Start/End: Original strand, 9308503 - 9308553
Alignment:
| Q |
35 |
agaatagaaatcaagcaaagcaatttcgacattgagaaaggtttttcatgt |
85 |
Q |
| |
|
|||| ||||||||| ||||| ||||| ||| |||||||||||||||||||| |
|
|
| T |
9308503 |
agaagagaaatcaatcaaaggaattttgactttgagaaaggtttttcatgt |
9308553 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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