View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10140A_low_424 (Length: 227)

Name: NF10140A_low_424
Description: NF10140A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10140A_low_424
NF10140A_low_424
[»] chr7 (28 HSPs)
chr7 (14-222)||(14627990-14628197)
chr7 (24-154)||(2843348-2843477)
chr7 (26-159)||(26583536-26583668)
chr7 (24-159)||(26492187-26492321)
chr7 (24-159)||(46821836-46821970)
chr7 (24-163)||(20116401-20116539)
chr7 (24-159)||(21266214-21266348)
chr7 (24-150)||(42311111-42311236)
chr7 (24-144)||(32684522-32684641)
chr7 (24-159)||(1448950-1449084)
chr7 (24-159)||(22927991-22928125)
chr7 (24-150)||(35496296-35496421)
chr7 (24-136)||(46338898-46339009)
chr7 (25-136)||(36143711-36143821)
chr7 (24-150)||(23085353-23085477)
chr7 (24-144)||(1485377-1485496)
chr7 (28-74)||(31235917-31235963)
chr7 (28-109)||(23425496-23425576)
chr7 (24-143)||(433813-433929)
chr7 (24-70)||(35667352-35667398)
chr7 (24-74)||(48207808-48207858)
chr7 (15-116)||(42067172-42067272)
chr7 (19-62)||(5546277-5546320)
chr7 (28-144)||(6001857-6001973)
chr7 (24-71)||(20083240-20083287)
chr7 (24-70)||(42408272-42408318)
chr7 (14-50)||(7640893-7640929)
chr7 (26-70)||(45199154-45199198)
[»] chr6 (24 HSPs)
chr6 (24-163)||(12652758-12652896)
chr6 (24-163)||(8496783-8496921)
chr6 (24-159)||(25064057-25064191)
chr6 (24-154)||(23947438-23947567)
chr6 (24-155)||(4984699-4984828)
chr6 (24-159)||(33109656-33109790)
chr6 (24-130)||(33740699-33740804)
chr6 (24-149)||(8028239-8028363)
chr6 (26-159)||(4468389-4468513)
chr6 (32-143)||(10228518-10228627)
chr6 (24-163)||(17237405-17237543)
chr6 (24-150)||(17334607-17334731)
chr6 (24-163)||(7876166-7876297)
chr6 (24-68)||(8196528-8196572)
chr6 (24-70)||(7881224-7881270)
chr6 (28-70)||(8266545-8266587)
chr6 (24-70)||(16419068-16419114)
chr6 (24-143)||(4088297-4088416)
chr6 (24-144)||(12165678-12165797)
chr6 (28-74)||(34489154-34489202)
chr6 (24-63)||(9508837-9508876)
chr6 (19-62)||(13436705-13436748)
chr6 (24-70)||(17346671-17346717)
chr6 (28-68)||(33543744-33543784)
[»] chr3 (33 HSPs)
chr3 (26-163)||(4178380-4178516)
chr3 (24-163)||(4172382-4172520)
chr3 (29-159)||(25162256-25162385)
chr3 (24-120)||(35499322-35499418)
chr3 (24-163)||(46934458-46934596)
chr3 (24-154)||(25631648-25631777)
chr3 (22-163)||(12115909-12116049)
chr3 (24-163)||(36905937-36906075)
chr3 (24-154)||(38855158-38855286)
chr3 (24-154)||(44907520-44907649)
chr3 (24-153)||(39917517-39917645)
chr3 (24-159)||(32607287-32607421)
chr3 (24-118)||(14464368-14464461)
chr3 (24-139)||(2342332-2342445)
chr3 (24-128)||(38440698-38440801)
chr3 (28-144)||(37169068-37169180)
chr3 (26-159)||(50611540-50611672)
chr3 (24-120)||(49552344-49552439)
chr3 (24-74)||(3850576-3850626)
chr3 (28-73)||(46178481-46178526)
chr3 (38-163)||(51202384-51202508)
chr3 (28-72)||(22802927-22802971)
chr3 (24-70)||(17237710-17237756)
chr3 (25-70)||(21488019-21488064)
chr3 (28-141)||(36735277-36735389)
chr3 (24-70)||(29503370-29503416)
chr3 (24-61)||(31793996-31794033)
chr3 (88-141)||(47980852-47980905)
chr3 (88-141)||(47990139-47990192)
chr3 (88-141)||(47999426-47999479)
chr3 (88-141)||(48008713-48008766)
chr3 (88-144)||(25849655-25849711)
chr3 (26-62)||(42719436-42719472)
[»] chr1 (37 HSPs)
chr1 (24-163)||(19716018-19716155)
chr1 (24-144)||(18569431-18569550)
chr1 (19-144)||(30818461-30818585)
chr1 (24-163)||(35584742-35584880)
chr1 (25-159)||(40646514-40646647)
chr1 (19-163)||(33291534-33291678)
chr1 (24-136)||(50272261-50272372)
chr1 (24-163)||(51871687-51871824)
chr1 (24-150)||(51868766-51868891)
chr1 (24-143)||(38520654-38520773)
chr1 (24-159)||(5701083-5701217)
chr1 (32-159)||(7342548-7342674)
chr1 (24-143)||(25406405-25406523)
chr1 (25-144)||(40881135-40881253)
chr1 (25-163)||(5324679-5324816)
chr1 (24-130)||(25728080-25728185)
chr1 (24-154)||(50148203-50148332)
chr1 (24-150)||(50166220-50166344)
chr1 (24-108)||(3871285-3871369)
chr1 (24-136)||(30878924-30879035)
chr1 (28-74)||(9919299-9919345)
chr1 (24-70)||(28035053-28035099)
chr1 (19-109)||(45805925-45806014)
chr1 (24-109)||(7997663-7997747)
chr1 (24-109)||(20266178-20266262)
chr1 (24-109)||(27872615-27872699)
chr1 (24-144)||(45426183-45426303)
chr1 (24-120)||(9172353-9172448)
chr1 (24-120)||(9180335-9180430)
chr1 (24-143)||(19723176-19723293)
chr1 (28-71)||(39987303-39987346)
chr1 (25-135)||(7312220-7312329)
chr1 (24-70)||(14545434-14545480)
chr1 (24-144)||(11453776-11453896)
chr1 (24-63)||(34519054-34519093)
chr1 (14-65)||(18649993-18650044)
chr1 (26-70)||(5155985-5156029)
[»] chr8 (27 HSPs)
chr8 (24-163)||(9498723-9498860)
chr8 (24-159)||(9619479-9619613)
chr8 (28-163)||(43890250-43890384)
chr8 (28-144)||(33342281-33342396)
chr8 (29-160)||(42448154-42448284)
chr8 (24-153)||(17949082-17949210)
chr8 (24-159)||(11725511-11725645)
chr8 (24-144)||(44577880-44577999)
chr8 (24-159)||(44100053-44100187)
chr8 (24-154)||(14907045-14907174)
chr8 (24-136)||(4808816-4808927)
chr8 (24-163)||(32724610-32724749)
chr8 (24-163)||(35580282-35580421)
chr8 (19-120)||(9072585-9072685)
chr8 (28-144)||(28239676-28239792)
chr8 (24-140)||(2655717-2655832)
chr8 (24-154)||(11196726-11196853)
chr8 (24-159)||(33895911-33896044)
chr8 (28-70)||(16794210-16794252)
chr8 (14-140)||(34611652-34611777)
chr8 (35-163)||(29777054-29777181)
chr8 (24-154)||(15597287-15597417)
chr8 (24-115)||(19876085-19876175)
chr8 (28-156)||(18733852-18733980)
chr8 (16-144)||(27747225-27747352)
chr8 (24-56)||(33298787-33298819)
chr8 (19-68)||(25241718-25241767)
[»] chr5 (33 HSPs)
chr5 (24-163)||(30371545-30371683)
chr5 (24-163)||(27266981-27267119)
chr5 (24-163)||(19281065-19281203)
chr5 (24-163)||(34881531-34881668)
chr5 (24-142)||(18677587-18677704)
chr5 (24-159)||(7241607-7241741)
chr5 (24-159)||(7246783-7246917)
chr5 (24-154)||(7150456-7150585)
chr5 (24-154)||(21060402-21060531)
chr5 (24-121)||(10649316-10649412)
chr5 (24-154)||(42579707-42579839)
chr5 (24-142)||(28235427-28235544)
chr5 (24-163)||(36344610-36344748)
chr5 (24-74)||(2057959-2058009)
chr5 (24-154)||(26578079-26578208)
chr5 (19-159)||(7887053-7887192)
chr5 (28-144)||(19259938-19260050)
chr5 (24-70)||(43261938-43261984)
chr5 (24-161)||(3271529-3271663)
chr5 (26-70)||(781302-781346)
chr5 (24-72)||(16981201-16981249)
chr5 (24-64)||(20257815-20257855)
chr5 (28-70)||(11767720-11767762)
chr5 (28-73)||(15570819-15570864)
chr5 (24-116)||(35475457-35475548)
chr5 (24-74)||(14211110-14211160)
chr5 (24-70)||(27576470-27576516)
chr5 (24-70)||(42886392-42886438)
chr5 (25-70)||(1582243-1582288)
chr5 (25-70)||(1602527-1602572)
chr5 (24-61)||(30298130-30298167)
chr5 (88-153)||(35676259-35676324)
chr5 (24-68)||(43148645-43148689)
[»] chr4 (47 HSPs)
chr4 (29-163)||(4643686-4643821)
chr4 (24-144)||(38706831-38706950)
chr4 (24-159)||(43444227-43444361)
chr4 (24-163)||(9528999-9529137)
chr4 (24-154)||(1531745-1531875)
chr4 (28-163)||(9283741-9283875)
chr4 (24-159)||(10389874-10390008)
chr4 (24-159)||(20569086-20569220)
chr4 (28-143)||(35965100-35965214)
chr4 (24-144)||(34024557-34024676)
chr4 (24-159)||(9645670-9645804)
chr4 (24-153)||(21089992-21090121)
chr4 (24-153)||(2115709-2115837)
chr4 (24-141)||(47416736-47416852)
chr4 (24-159)||(25273709-25273848)
chr4 (24-150)||(31381792-31381917)
chr4 (24-159)||(50766630-50766766)
chr4 (32-159)||(6972644-6972769)
chr4 (24-163)||(43154142-43154279)
chr4 (24-159)||(53616772-53616906)
chr4 (28-144)||(5333656-5333768)
chr4 (28-144)||(10359671-10359787)
chr4 (45-164)||(867986-868104)
chr4 (24-159)||(37188713-37188847)
chr4 (24-146)||(51317832-51317954)
chr4 (24-70)||(8009480-8009526)
chr4 (93-163)||(44947233-44947303)
chr4 (24-159)||(27593959-27594091)
chr4 (24-72)||(56194519-56194567)
chr4 (23-66)||(14183729-14183772)
chr4 (24-73)||(49680456-49680505)
chr4 (28-72)||(18139038-18139082)
chr4 (28-72)||(49126251-49126295)
chr4 (93-153)||(50179611-50179671)
chr4 (19-66)||(1008221-1008268)
chr4 (28-70)||(5333584-5333626)
chr4 (28-74)||(12265373-12265419)
chr4 (28-62)||(23100617-23100651)
chr4 (24-144)||(35261037-35261160)
chr4 (100-163)||(29965505-29965568)
chr4 (24-70)||(32952867-32952913)
chr4 (24-65)||(21405440-21405481)
chr4 (24-61)||(29965565-29965602)
chr4 (24-68)||(23329094-23329138)
chr4 (24-60)||(46991251-46991287)
chr4 (24-68)||(49072878-49072922)
chr4 (28-68)||(52098044-52098084)
[»] chr2 (34 HSPs)
chr2 (24-153)||(27249272-27249400)
chr2 (24-159)||(30420503-30420637)
chr2 (24-163)||(36233827-36233965)
chr2 (24-154)||(6173463-6173592)
chr2 (24-154)||(9986466-9986597)
chr2 (24-163)||(2808591-2808729)
chr2 (24-150)||(8971747-8971874)
chr2 (24-159)||(21570529-21570663)
chr2 (24-159)||(34598813-34598948)
chr2 (14-139)||(459385-459509)
chr2 (24-150)||(45128040-45128164)
chr2 (24-161)||(40626148-40626284)
chr2 (24-154)||(41712886-41713015)
chr2 (24-136)||(3725030-3725141)
chr2 (24-72)||(31581840-31581888)
chr2 (24-91)||(26025530-26025597)
chr2 (44-159)||(33229129-33229243)
chr2 (24-74)||(4192749-4192799)
chr2 (24-153)||(3270349-3270477)
chr2 (32-159)||(25086862-25086986)
chr2 (32-150)||(20047211-20047327)
chr2 (24-74)||(27477065-27477115)
chr2 (24-70)||(32680703-32680749)
chr2 (24-159)||(40660052-40660183)
chr2 (24-135)||(7015831-7015941)
chr2 (93-144)||(31581891-31581942)
chr2 (24-74)||(42949624-42949675)
chr2 (24-70)||(39641980-39642026)
chr2 (34-74)||(41430938-41430978)
chr2 (28-70)||(18694961-18695004)
chr2 (24-70)||(8805781-8805827)
chr2 (24-74)||(32913152-32913202)
chr2 (24-61)||(22421659-22421696)
chr2 (24-68)||(27949339-27949383)
[»] scaffold0003 (1 HSPs)
scaffold0003 (24-153)||(361917-362043)
[»] scaffold0311 (1 HSPs)
scaffold0311 (24-144)||(8557-8676)
[»] scaffold0495 (1 HSPs)
scaffold0495 (32-143)||(5237-5346)
[»] scaffold0426 (1 HSPs)
scaffold0426 (24-159)||(6161-6294)
[»] scaffold0146 (1 HSPs)
scaffold0146 (24-70)||(16443-16489)
[»] scaffold0608 (1 HSPs)
scaffold0608 (93-153)||(70-130)
[»] scaffold0014 (1 HSPs)
scaffold0014 (24-66)||(201492-201534)


Alignment Details
Target: chr7 (Bit Score: 148; Significance: 3e-78; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 14 - 222
Target Start/End: Original strand, 14627990 - 14628197
Alignment:
Q  14 cctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttca 113  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  14627990 cctatatttatgtgaaaatcacttatttagattgaattagagaaaaaaagatgaagaggaggtaatttccggtaaaaatttgacccaaaaccacccttca 14628089  T
Q  114 atgaagacactgtaagaaaaaacctagagagtgaaaactagagccgactttcaacaacaccattcatagtnnnnnnncgttcgtatacttcttacctccg 213  Q
    ||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||        |||||||||||||||||||||     
T  14628090 atgaagacactgtaagaaaaaacttagagagcgaaaactagggccgactttcaacaacaccattcatagtaaaaaaa-gttcgtatacttcttacctcct 14628188  T
Q  214 gttcttaat 222  Q
    |||||||||    
T  14628189 gttcttaat 14628197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 24 - 154
Target Start/End: Original strand, 2843348 - 2843477
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||| |  |||| | | || | |||||||||||||||||||||||||||| |     
T  2843348 tgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagggg-tgttttcaggtcaagaattgacccaaaaccacccttcaatgaagaaat 2843446  T
Q  124 tgtaagaaaaaacctagagagtgaaaactag 154  Q
    ||||||| ||||||||||||| |||||||||    
T  2843447 tgtaagagaaaacctagagagagaaaactag 2843477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 26 - 159
Target Start/End: Complemental strand, 26583668 - 26583536
Alignment:
Q  26 tgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacactg 125  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||| | ||||| | | || | |||||| |||||||||| |||||||||| ||||    
T  26583668 tgaaaatcacttatttagattgaaatagagataaaaagatgaagagggg-tgatttcaggtcaagaattgaccaaaaaccacccctcaatgaagaaactg 26583570  T
Q  126 taagaaaaaacctagagagtgaaaactagagccg 159  Q
    |||||||||||||||| || ||||||||| ||||    
T  26583569 taagaaaaaacctagaaagagaaaactagggccg 26583536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 159
Target Start/End: Complemental strand, 26492321 - 26492187
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||| ||||| ||||| | | || | ||||||||||||||||| |||||||||| ||    
T  26492321 tgtgaaaatcacttatttaaattgaaatagagagaaaaagatgaaga-ggggttatttcaggtcaagaattgacccaaaaccacccctcaatgaagaaac 26492223  T
Q  124 tgtaagaaaaaacctagagagtgaaaactagagccg 159  Q
    ||||||| |||| ||||||||  |||||||| ||||    
T  26492222 tgtaagacaaaatctagagagataaaactagggccg 26492187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 24 - 159
Target Start/End: Complemental strand, 46821970 - 46821836
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    |||||||||||||||||||||||||| || ||||||||||||||||| ||||| ||||| | | || | ||||||||||||||||| |||||||| | |     
T  46821970 tgtgaaaatcacttatttagattgaaataaagagaaaaagatgaaga-ggggtgatttcaggtcaagaattgacccaaaaccacccctcaatgaaaaaat 46821872  T
Q  124 tgtaagaaaaaacctagagagtgaaaactagagccg 159  Q
    | ||||| ||||||||||||| ||||||||| ||||    
T  46821871 tataagagaaaacctagagagagaaaactagggccg 46821836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 163
Target Start/End: Complemental strand, 20116539 - 20116401
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||  |||| ||||| | | |||| |||||||||||| |||| ||| |||||| ||    
T  20116539 tgtgaaaatcacttatttagattgaaatagatagaaaaagatgaaga-agggtgatttcaggtcaaaaattgacccaaaactacccctcattgaagaaac 20116441  T
Q  124 tgtaagaaaaaacctagagagtgaaaactagagccgactt 163  Q
    |  |||| ||||| ||||||| ||||||||| ||||||||    
T  20116440 ttgaagagaaaacatagagagagaaaactagggccgactt 20116401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 24 - 159
Target Start/End: Complemental strand, 21266348 - 21266214
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    |||||||||||||||||||||||||| || ||||||||||||||||| | ||| |||||   | || | ||||||||||||||||| ||||| |||| ||    
T  21266348 tgtgaaaatcacttatttagattgaaataaagagaaaaagatgaaga-gaggtgatttcatgtcaataattgacccaaaaccacccctcaataaagaaac 21266250  T
Q  124 tgtaagaaaaaacctagagagtgaaaactagagccg 159  Q
    || |||||||||| || |||| ||||||||| ||||    
T  21266249 tggaagaaaaaacttaaagagagaaaactagggccg 21266214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 24 - 150
Target Start/End: Complemental strand, 42311236 - 42311111
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    |||||| ||||||||||||||||||| ||||||||||| |||||||||||  | ||||| | | || | ||||||||||||||||| ||| |||||| ||    
T  42311236 tgtgaatatcacttatttagattgaaatagagagaaaatgatgaagaggga-tgatttcaggtcaagaattgacccaaaaccacccctcagtgaagaaac 42311138  T
Q  124 tgtaagaaaaaacctagagagtgaaaa 150  Q
    | ||||| ||||||||||||| |||||    
T  42311137 tctaagagaaaacctagagagagaaaa 42311111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 32684641 - 32684522
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||    || ||||| | | || | ||||||||||||||||| |||||||||| ||    
T  32684641 tgtgaaaatcacttatttagattgaaatagagagaaaacgatgaaga-catgtgatttcaggtcaagaattgacccaaaaccacccctcaatgaagaaac 32684543  T
Q  124 tgtaagaaaaaacctagagag 144  Q
     |||||| |||||||||||||    
T  32684542 cgtaagagaaaacctagagag 32684522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 24 - 159
Target Start/End: Original strand, 1448950 - 1449084
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||    ||| ||||| | | || | ||||||||||||||||| ||||  ||||  |    
T  1448950 tgtgaaaatcacttatttagattgaaatagagagaaagagatgaag-tttggttatttcaggtcaagaattgacccaaaaccacccctcaacaaagaatc 1449048  T
Q  124 tgtaagaaaaaacctagagagtgaaaactagagccg 159  Q
    || |||||||||||||||||| ||||||||| ||||    
T  1449049 tggaagaaaaaacctagagagagaaaactagggccg 1449084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 24 - 159
Target Start/End: Original strand, 22927991 - 22928125
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    ||||||| |||||||||||||||||| |||||||||||||||||| | ||||| ||||| | | || | |||||||||||||||||   |||||||| ||    
T  22927991 tgtgaaagtcacttatttagattgaaatagagagaaaaagatgaa-aaggggtgatttcaggtcaagaattgacccaaaaccaccccctaatgaagaaac 22928089  T
Q  124 tgtaagaaaaaacctagagagtgaaaactagagccg 159  Q
     | |||| ||||||||||||| ||||| ||| ||||    
T  22928090 gggaagagaaaacctagagagagaaaattagggccg 22928125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 150
Target Start/End: Original strand, 35496296 - 35496421
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||   ||| ||||  | | || | ||||||||||||||||| |||||||||| ||    
T  35496296 tgtgaaaatcacttaattagattgaaatagagagaaaaagatgaaga-ttggtgattttaggtcaagaattgacccaaaaccacccctcaatgaagaaac 35496394  T
Q  124 tgtaagaaaaaacctagagagtgaaaa 150  Q
     |||||| |||||||| |||| |||||    
T  35496395 agtaagagaaaacctaaagagagaaaa 35496421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 24 - 136
Target Start/End: Complemental strand, 46339009 - 46338898
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    ||||||||||||||||||| |||||| || ||||||||||||||||| ||| ||||||| | | || | |||||||||||| |||| |||||||||| |     
T  46339009 tgtgaaaatcacttatttacattgaaataaagagaaaaagatgaaga-gggataatttcaggtcaagaattgacccaaaactacccctcaatgaagaaat 46338911  T
Q  124 tgtaagaaaaaac 136  Q
    ||||||| |||||    
T  46338910 tgtaagagaaaac 46338898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 25 - 136
Target Start/End: Complemental strand, 36143821 - 36143711
Alignment:
Q  25 gtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacact 124  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||  || |||||||   | ||||||||| ||||||| |||| |||||||| | ||     
T  36143821 gtgaaaaacacttatttagattgaattagagagaaaaagatgaaga-tggataatttcacgttaaaatttgatccaaaacaacccctcaatgaaaaaacg 36143723  T
Q  125 gtaagaaaaaac 136  Q
    | ||||||||||    
T  36143722 gaaagaaaaaac 36143711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 24 - 150
Target Start/End: Complemental strand, 23085477 - 23085353
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    ||||||| ||| |||||||||||||| |||| ||||||||||||||||||||| |||||   | || | |||||||||||||||||  ||||||||| ||    
T  23085477 tgtgaaagtcaattatttagattgaaatagaaagaaaaagatgaagagggggtgatttcaagtcaataattgacccaaaaccaccc-ccaatgaagaaac 23085379  T
Q  124 tgtaagaaaaaacctagagagtgaaaa 150  Q
     | |||| ||||||||||||| |||||    
T  23085378 -ggaagagaaaacctagagagagaaaa 23085353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 1485377 - 1485496
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||  |||| ||||  | | || | || ||||||||||||||  ||||||||| ||    
T  1485377 tgtgaaagtcacttatttagattgaaatagagagaaaaagatgaaga-cgggtgattttaggtcaagaattaacccaaaaccaccccccaatgaagaaac 1485475  T
Q  124 tgtaagaaaaaacctagagag 144  Q
     | |||| |||||||||||||    
T  1485476 gggaagagaaaacctagagag 1485496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 31235917 - 31235963
Alignment:
Q  28 aaaatcacttatttagattgaattagagagaaaaagatgaagagggg 74  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  31235917 aaaatcacttatttagattgaaatagagagaaaaagatgaagagggg 31235963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 23425496 - 23425576
Alignment:
Q  28 aaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccaccc 109  Q
    |||||||||||||||||||||| || ||||||||||||||||| ||||| ||||| | | || | |||||||||||||||||    
T  23425496 aaaatcacttatttagattgaaatatagagaaaaagatgaaga-ggggtgatttcaggtcaagaattgacccaaaaccaccc 23425576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 433813 - 433929
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    ||||||| ||| |||||||||||||| |||||||||||||||||| | ||| | ||||| | | |||| |||||||||||||||||  ||||||||| ||    
T  433813 tgtgaaagtcatttatttagattgaaatagagagaaaaagatgaa-aagggatgatttcaggtcaaaaattgacccaaaaccaccc--caatgaagaaac 433909  T
Q  124 tgtaagaaaaaacctagaga 143  Q
       |||| ||||||||||||    
T  433910 cagaagagaaaacctagaga 433929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 35667352 - 35667398
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaaga 70  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||    
T  35667352 tgtgaaaatcacttatttagattgaaatagagagaaaaatatgaaga 35667398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 48207858 - 48207808
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggg 74  Q
    |||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  48207858 tgtgaaaatcacttatttagattgaaatattgagaaaaagatgaagagggg 48207808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 116
Target Start/End: Original strand, 42067172 - 42067272
Alignment:
Q  15 ctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaa 114  Q
    |||||| | |||||||||||||||||||||||||| || ||| || |||||||||| | ||| ||||| | | || | ||||||||||| ||||||||||    
T  42067172 ctatatctatgtgaaaatcacttatttagattgaaatatagataacaagatgaaga-gaggtgatttcaggtcaagaattgacccaaaatcacccttcaa 42067270  T
Q  115 tg 116  Q
    ||    
T  42067271 tg 42067272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 62
Target Start/End: Complemental strand, 5546320 - 5546277
Alignment:
Q  19 atttttgtgaaaatcacttatttagattgaattagagagaaaaa 62  Q
    |||| |||||||||||||||||||||||||| ||||||||||||    
T  5546320 atttatgtgaaaatcacttatttagattgaaatagagagaaaaa 5546277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 144
Target Start/End: Complemental strand, 6001973 - 6001857
Alignment:
Q  28 aaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaacca-cccttcaatgaagacactgt 126  Q
    ||||||||||||||||||| || ||| ||||||||||||||||  |||| ||||| | | |||| |||| |||||| || ||||||||| |||| | ||     
T  6001973 aaaatcacttatttagattaaaatagggagaaaaagatgaaga-tgggtgatttcaggtcaaaaattgatccaaaatcaccccttcaataaagaaaatgg 6001875  T
Q  127 aagaaaaaacctagagag 144  Q
    |||| |||||||| ||||    
T  6001874 aagagaaaacctaaagag 6001857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 20083287 - 20083240
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagag 71  Q
    |||||||||  ||||||||||||||| |||| ||||||||||||||||    
T  20083287 tgtgaaaattgcttatttagattgaaatagaaagaaaaagatgaagag 20083240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 70
Target Start/End: Complemental strand, 42408318 - 42408272
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaaga 70  Q
    |||||||| || |||||||||||||| || |||||||||||||||||    
T  42408318 tgtgaaaaacaattatttagattgaaataaagagaaaaagatgaaga 42408272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 50
Target Start/End: Original strand, 7640893 - 7640929
Alignment:
Q  14 cctatatttttgtgaaaatcacttatttagattgaat 50  Q
    ||||||| | |||||||||||||||||||||||||||    
T  7640893 cctatatctatgtgaaaatcacttatttagattgaat 7640929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 45199154 - 45199198
Alignment:
Q  26 tgaaaatcacttatttagattgaattagagagaaaaagatgaaga 70  Q
    ||||||||||||||||| ||| || || |||||||||||||||||    
T  45199154 tgaaaatcacttatttaaattaaaatatagagaaaaagatgaaga 45199198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 80; Significance: 1e-37; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 24 - 163
Target Start/End: Complemental strand, 12652896 - 12652758
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||| | | || | ||||||||||||||||| |||||||||| ||    
T  12652896 tgtgaaaatcacttatttagattgaaatagagagaaaaagatgaagagggg-tgatttcaggtcaagaattgacccaaaaccacccctcaatgaagaaac 12652798  T
Q  124 tgtaagaaaaaacctagagagtgaaaactagagccgactt 163  Q
    ||| ||| ||||||||||||| ||||||||| ||||||||    
T  12652797 tgtgagagaaaacctagagagagaaaactagggccgactt 12652758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 163
Target Start/End: Complemental strand, 8496921 - 8496783
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    |||||||||||||||||||||||||| || ||||||||||||||||| ||||| ||||| | | || | ||||| ||||||||||| |||||||||| |     
T  8496921 tgtgaaaatcacttatttagattgaaataaagagaaaaagatgaaga-ggggtgatttcaggtcaagaattgactcaaaaccacccctcaatgaagaaat 8496823  T
Q  124 tgtaagaaaaaacctagagagtgaaaactagagccgactt 163  Q
    ||||||| ||||||||||||| |||||||||  |||||||    
T  8496822 tgtaagagaaaacctagagagagaaaactaggaccgactt 8496783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 159
Target Start/End: Complemental strand, 25064191 - 25064057
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    |||||||||||||||||||||||||| || |||||||||||||||||| || | ||||| | | || | ||||||||||||||||| |||||||||| |     
T  25064191 tgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagagg-tgatttcaggtcaagaattgacccaaaaccacccctcaatgaagaaat 25064093  T
Q  124 tgtaagaaaaaacctagagagtgaaaactagagccg 159  Q
    ||||||| ||||||||||||| ||||||||| ||||    
T  25064092 tgtaagagaaaacctagagagagaaaactagggccg 25064057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 24 - 154
Target Start/End: Original strand, 23947438 - 23947567
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||| ||| | ||||| | | || | ||||||||||||||||| |||||||||| ||    
T  23947438 tgtgaaaatcacttatttagattgaaatagagagaaaacgatgaagatggg-tgatttcaggtcaagaattgacccaaaaccacccctcaatgaagaaac 23947536  T
Q  124 tgtaagaaaaaacctagagagtgaaaactag 154  Q
    |  |||||||||||||||||| |||||||||    
T  23947537 tagaagaaaaaacctagagagagaaaactag 23947567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 24 - 155
Target Start/End: Original strand, 4984699 - 4984828
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||  | || ||||| | | || | ||||||||||||||||| |||||| ||| ||    
T  4984699 tgtgaaaatcacttatttagattgaaatagagag-aaaagatgaaga-tgagtgatttcaggtcaagaattgacccaaaaccacccctcaatggagaaac 4984796  T
Q  124 tgtaagaaaaaacctagagagtgaaaactaga 155  Q
    ||||||| |||||||| ||||  |||||||||    
T  4984797 tgtaagagaaaacctaaagagataaaactaga 4984828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 24 - 159
Target Start/End: Complemental strand, 33109790 - 33109656
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    |||||||||||||||||||||||||| || |||||||||||||||||  ||   ||||  | | |||| ||||||||||||||||| |||||||||| ||    
T  33109790 tgtgaaaatcacttatttagattgaaataaagagaaaaagatgaaga-tggacgattttaggtcaaaaattgacccaaaaccacccgtcaatgaagaaac 33109692  T
Q  124 tgtaagaaaaaacctagagagtgaaaactagagccg 159  Q
    || |||| |||||||| | || ||||||||| ||||    
T  33109691 tggaagagaaaacctaaaaagagaaaactagggccg 33109656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 130
Target Start/End: Original strand, 33740699 - 33740804
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||  | | || | |||||| |||||||||| |||||||||| ||    
T  33740699 tgtgaaaatcacttatttagattgaaatagagagaaaaagatgaaga-ggggtgattttaggtcaagaattgaccaaaaaccacccctcaatgaagaaac 33740797  T
Q  124 tgtaaga 130  Q
     ||||||    
T  33740798 agtaaga 33740804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 149
Target Start/End: Original strand, 8028239 - 8028363
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||  ||||| ||| | ||| || | ||||||||||| ||||  |||||||||| ||    
T  8028239 tgtgaaaatcacttatttagattgaaacagagagaaaaagatgaag-tggggtgattccagatcaataattgacccaaaatcacctctcaatgaagaaac 8028337  T
Q  124 tgtaagaaaaaacctagagagtgaaa 149  Q
    ||||  | |||||||| |||| ||||    
T  8028338 tgtactagaaaacctaaagagagaaa 8028363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 26 - 159
Target Start/End: Complemental strand, 4468513 - 4468389
Alignment:
Q  26 tgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacactg 125  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||| | | |||   | || | ||||||||||| |         |||||| ||||    
T  4468513 tgaaaatcacttatttagattgaaatagagagaacaagatgaagagggg-tgacttcatgtcaagaattgacccaaaatcg--------tgaagaaactg 4468423  T
Q  126 taagaaaaaacctagagagtgaaaactagagccg 159  Q
    ||||||||||||||||||||||||||||||||||    
T  4468422 taagaaaaaacctagagagtgaaaactagagccg 4468389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 32 - 143
Target Start/End: Complemental strand, 10228627 - 10228518
Alignment:
Q  32 tcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacactgtaagaa 131  Q
    |||||||||||||||||| |||||||| ||||||||||| ||||| ||||| | | || | |||||||||||||||||  ||||||||| || | ||||     
T  10228627 tcacttatttagattgaagtagagagagaaagatgaaga-ggggtgatttcaggtcaagaattgacccaaaaccaccc-ccaatgaagaaacgggaagag 10228530  T
Q  132 aaaacctagaga 143  Q
    ||||||||||||    
T  10228529 aaaacctagaga 10228518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 24 - 163
Target Start/End: Original strand, 17237405 - 17237543
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    ||||||||| |||||||||||||||| || ||||||||||||||||||||| | |||||   | || | ||||||||||||||||| |||||| | |  |    
T  17237405 tgtgaaaataacttatttagattgaaatatagagaaaaagatgaagagggg-tgatttcatgtcaagaattgacccaaaaccacccctcaatggaaaatc 17237503  T
Q  124 tgtaagaaaaaacctagagagtgaaaactagagccgactt 163  Q
    |  || | ||||| ||||||| ||||||||| ||||||||    
T  17237504 tagaaaagaaaacatagagagagaaaactagggccgactt 17237543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 150
Target Start/End: Complemental strand, 17334731 - 17334607
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    |||||||||||||||||||||||||| || | |||||||||||||||   ||| ||||| ||| || | | || |||||||||||| |||||||||| |     
T  17334731 tgtgaaaatcacttatttagattgaaataaacagaaaaagatgaaga-ttggtgatttcagatcaagaatcgatccaaaaccaccc-tcaatgaagaaat 17334634  T
Q  124 tgtaagaaaaaacctagagagtgaaaa 150  Q
    ||||||| |||| |||||||| |||||    
T  17334633 tgtaagagaaaatctagagagagaaaa 17334607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 24 - 163
Target Start/End: Original strand, 7876166 - 7876297
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    |||||||||||||||||||||||||| || |||||||||||||||||  |||| ||||  | | || | |||| |||||||||||| |||||||||| ||    
T  7876166 tgtgaaaatcacttatttagattgaaataaagagaaaaagatgaaga-tgggtgattttaggtcaataattgatccaaaaccacccctcaatgaagaaac 7876264  T
Q  124 tgtaagaaaaaacctagagagtgaaaactagagccgactt 163  Q
            ||||||||||||| |||||||||||| |||||    
T  7876265 -------gaaaacctagagagagaaaactagagctgactt 7876297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 8196528 - 8196572
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaa 68  Q
    |||||||||||||||||||||||||| ||||||||||||||||||    
T  8196528 tgtgaaaatcacttatttagattgaaatagagagaaaaagatgaa 8196572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 7881224 - 7881270
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaaga 70  Q
    |||||||||||||||||||||||||| || |||||||||||||||||    
T  7881224 tgtgaaaatcacttatttagattgaaataaagagaaaaagatgaaga 7881270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 70
Target Start/End: Complemental strand, 8266587 - 8266545
Alignment:
Q  28 aaaatcacttatttagattgaattagagagaaaaagatgaaga 70  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  8266587 aaaatcacttatttagattgaagtagagagaaaaagatgaaga 8266545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 70
Target Start/End: Complemental strand, 16419114 - 16419068
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaaga 70  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||    
T  16419114 tgtgaaagtcacttatttagattgaaatagagagaaaaagatgaaga 16419068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 4088416 - 4088297
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaaga-tgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagaca 122  Q
    |||||||||||||||||||||||| | |||||| ||||| | |||||| ||| | ||||| | | || | ||||||||||||||||| ||||| ||||      
T  4088416 tgtgaaaatcacttatttagattgtaatagagataaaaaaaatgaagatggg-tgatttcaggtcaagaattgacccaaaaccacccctcaataaagaac 4088318  T
Q  123 ctgtaagaaaaaacctagaga 143  Q
    |||||| | ||||||||||||    
T  4088317 ctgtaaaagaaaacctagaga 4088297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 12165797 - 12165678
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    |||||||||||||||||||||||||| |||  | ||||||||||||||| | | ||||| | | || | |||||||||||  || | |||||||||| ||    
T  12165797 tgtgaaaatcacttatttagattgaaataggcataaaaagatgaagaggag-tgatttcaggtcaataattgacccaaaataactcctcaatgaagaaac 12165699  T
Q  124 tgtaagaaaaaacctagagag 144  Q
    || |||| |||||| ||||||    
T  12165698 tggaagagaaaaccgagagag 12165678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 34489202 - 34489154
Alignment:
Q  28 aaaatcacttatttagat--tgaattagagagaaaaagatgaagagggg 74  Q
    ||||||||||||||| ||  |||||||||||||||||||||||||||||    
T  34489202 aaaatcacttatttatatattgaattagagagaaaaagatgaagagggg 34489154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 63
Target Start/End: Original strand, 9508837 - 9508876
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaag 63  Q
    ||||||||||||||||||||||||||||| | ||||||||    
T  9508837 tgtgaaaatcacttatttagattgaattaaaaagaaaaag 9508876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 62
Target Start/End: Complemental strand, 13436748 - 13436705
Alignment:
Q  19 atttttgtgaaaatcacttatttagattgaattagagagaaaaa 62  Q
    |||| ||||||||||||||||||| |||||| ||||||||||||    
T  13436748 atttatgtgaaaatcacttatttaaattgaaatagagagaaaaa 13436705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 17346671 - 17346717
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaaga 70  Q
    ||||||||||| ||||||| ||| ||||||| |||||||||||||||    
T  17346671 tgtgaaaatcatttatttatattaaattagaaagaaaaagatgaaga 17346717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 33543744 - 33543784
Alignment:
Q  28 aaaatcacttatttagattgaattagagagaaaaagatgaa 68  Q
    ||||| |||||||||||||||| || |||||||||||||||    
T  33543744 aaaattacttatttagattgaaatatagagaaaaagatgaa 33543784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 74; Significance: 4e-34; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 26 - 163
Target Start/End: Complemental strand, 4178516 - 4178380
Alignment:
Q  26 tgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacactg 125  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||| | ||||  | | || | ||||||||||||||||| |||||||||| || |    
T  4178516 tgaaaatcacttatttagattgaaatagagagaaaaagatgaagatggg-tgattttaggtcaagaattgacccaaaaccacccctcaatgaagaaacag 4178418  T
Q  126 taagaaaaaacctagagagtgaaaactagagccgactt 163  Q
    ||||||||||||||||||| ||||||||| ||||||||    
T  4178417 taagaaaaaacctagagagagaaaactagggccgactt 4178380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 163
Target Start/End: Complemental strand, 4172520 - 4172382
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| ||   | |||  | ||| |||| ||||||||||||||| |||||||||| ||    
T  4172520 tgtgaaaatcacttatttagattgaaatagagagaaaaagatgaagatggatgattttatgttaagaatt-gacccaaaaccacccctcaatgaagaaac 4172422  T
Q  124 tgtaagaaaaaacctagagagtgaaaactagagccgactt 163  Q
     ||||||||||| |||||||| ||||||||| ||||||||    
T  4172421 agtaagaaaaaatctagagagagaaaactagggccgactt 4172382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 29 - 159
Target Start/End: Complemental strand, 25162385 - 25162256
Alignment:
Q  29 aaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacactgtaa 128  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||| | |||||  || || | ||||| ||||||||||| ||| |||||| |||||||    
T  25162385 aaatcacttatttagattgaaatagagagaaaaagatgaagatggg-tgatttcaaatcaagaattgacacaaaaccacccctcagtgaagaaactgtaa 25162287  T
Q  129 gaaaaaacctagagagtgaaaactagagccg 159  Q
    || ||||||||||||| ||||||||||||||    
T  25162286 gagaaaacctagagagagaaaactagagccg 25162256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 24 - 120
Target Start/End: Original strand, 35499322 - 35499418
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaaga 120  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||| | |||||| |||||| |||||||||| ||||||||||    
T  35499322 tgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagggggtgatttcaggtaaaaaattgaccaaaaaccacccctcaatgaaga 35499418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 24 - 163
Target Start/End: Complemental strand, 46934596 - 46934458
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||| ||||| ||||| | | |||| |||||| |||||||||| |||||||||| |     
T  46934596 tgtgaaaatcacttatttagattgaaatagagagagaaagatgaaga-ggggtgatttcaggtcaaaaattgaccaaaaaccacccctcaatgaagaaag 46934498  T
Q  124 tgtaagaaaaaacctagagagtgaaaactagagccgactt 163  Q
    |  |||| ||||||||||||| ||||| ||| ||||||||    
T  46934497 tagaagagaaaacctagagagagaaaattagggccgactt 46934458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 24 - 154
Target Start/End: Original strand, 25631648 - 25631777
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||||||  | ||||  | | |||| ||||||||||||||||| |||||||||| |     
T  25631648 tgtgaaaatcacttatttagattgaaatagagagaaaaagatggagaggga-tgattttaggtcaaaaattgacccaaaaccacccctcaatgaagaaat 25631746  T
Q  124 tgtaagaaaaaacctagagagtgaaaactag 154  Q
     |||||| ||||||||||||| |||||||||    
T  25631747 agtaagagaaaacctagagagagaaaactag 25631777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 22 - 163
Target Start/End: Complemental strand, 12116049 - 12115909
Alignment:
Q  22 tttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagac 121  Q
    |||||||||||||||||||||||||||| || |||| ||||||||||||| |  | ||||| | | || | ||||| ||||||||||| ||||||||||     
T  12116049 tttgtgaaaatcacttatttagattgaaataaagaggaaaagatgaagagaga-tgatttcaggtcaagaattgactcaaaaccacccctcaatgaagaa 12115951  T
Q  122 actgtaagaaaaaacctagagagtgaaaactagagccgactt 163  Q
    | ||||| | ||||||||||||| ||||||||||||||||||    
T  12115950 attgtaaaagaaaacctagagagagaaaactagagccgactt 12115909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 163
Target Start/End: Complemental strand, 36906075 - 36905937
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    ||||||||||||||||||| |||||| || ||||||||||||||||| ||| | ||||| | | || | |||||||||||||| || |||||||||| |     
T  36906075 tgtgaaaatcacttatttatattgaaataaagagaaaaagatgaagaaggg-tgatttcaggtcaagaattgacccaaaaccatccatcaatgaagaaat 36905977  T
Q  124 tgtaagaaaaaacctagagagtgaaaactagagccgactt 163  Q
    ||||||| ||||||||||||| ||||| ||| ||||||||    
T  36905976 tgtaagagaaaacctagagagagaaaattagggccgactt 36905937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 154
Target Start/End: Original strand, 38855158 - 38855286
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||  | |||| |  || ||  |||||||||||||||| |||||||||| |     
T  38855158 tgtgaaaatcacttatttagattgatatagagagaaaaagatgaagaggggtgattttcggtcaagaa--tgacccaaaaccacccctcaatgaagaaat 38855255  T
Q  124 tgtaagaaaaaacctagagagtgaaaactag 154  Q
     |||||| ||||||||||||| |||||||||    
T  38855256 agtaagagaaaacctagagagagaaaactag 38855286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 24 - 154
Target Start/End: Original strand, 44907520 - 44907649
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    |||||||||||||| ||||||||||| || ||||||||||||||||| ||||| ||||| | | || | ||||||||||||||||| |||| ||||| |     
T  44907520 tgtgaaaatcacttgtttagattgaaataaagagaaaaagatgaaga-ggggtgatttcaggtcaagaattgacccaaaaccacccctcaaagaagaaat 44907618  T
Q  124 tgtaagaaaaaacctagagagtgaaaactag 154  Q
    |||| || ||||||||||||| |||||||||    
T  44907619 tgtaggagaaaacctagagagagaaaactag 44907649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 153
Target Start/End: Original strand, 39917517 - 39917645
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||  || | ||||| | | || | ||||||||||||||| | ||| |||||| ||    
T  39917517 tgtgaaaatcacttatttagattgaattagagagaaaaatatgaaga-tggatgatttcaggtcaagaattgacccaaaaccactcctcagtgaagaaac 39917615  T
Q  124 tgtaagaaaaaacctagagagtgaaaacta 153  Q
    ||||||  ||||||||||||| ||||||||    
T  39917616 tgtaagggaaaacctagagagagaaaacta 39917645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 24 - 159
Target Start/End: Complemental strand, 32607421 - 32607287
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaacca-cccttcaatgaagaca 122  Q
    |||||||||||||||||||||||||| || |||||||| ||||||||||||   ||||| | | || | |||||||||||||| ||| |||||||||| |    
T  32607421 tgtgaaaatcacttatttagattgaaataaagagaaaatgatgaagaggggt--atttcaggtcaagaattgacccaaaaccaccccctcaatgaagaaa 32607324  T
Q  123 ctgtaagaaaaaacctagagagtgaaaactagagccg 159  Q
     ||||||| |||| |||||||| ||||||||| ||||    
T  32607323 ttgtaagagaaaatctagagagagaaaactagggccg 32607287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 118
Target Start/End: Complemental strand, 14464461 - 14464368
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaa 118  Q
    |||||||||||||||||||||||||| || ||||||||||||||| | ||||| ||||| | | || | ||||||||||||||||||||||||||    
T  14464461 tgtgaaaatcacttatttagattgaaataaagagaaaaagatgaata-ggggtgatttcaggtcaagaattgacccaaaaccacccttcaatgaa 14464368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 24 - 139
Target Start/End: Complemental strand, 2342445 - 2342332
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||  ||||   ||| | |  | | ||||||||||||||||| |||| ||||| ||    
T  2342445 tgtgaaaatcacttatttagattgaaatagagagaaaaagatgaaga--gggttgattcaggtttagaattgacccaaaaccacccctcaacgaagaaac 2342348  T
Q  124 tgtaagaaaaaaccta 139  Q
    ||||||| ||||||||    
T  2342347 tgtaagagaaaaccta 2342332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 24 - 128
Target Start/End: Original strand, 38440698 - 38440801
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||| | | ||||| | | || | ||||| |||||||||| ||||||||||| ||    
T  38440698 tgtgaaaatcacttatttagattgaaatagagagaaaaagataaagaggag-tgatttcaggtcaagaattgactcaaaaccaccattcaatgaagaaac 38440796  T
Q  124 tgtaa 128  Q
    |||||    
T  38440797 tgtaa 38440801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 28 - 144
Target Start/End: Complemental strand, 37169180 - 37169068
Alignment:
Q  28 aaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacactgta 127  Q
    ||||||||||||||| |||||||||||||||||||| |||||| | ||| ||||| | |||||| |||| |||||| ||||| |||||||||| |||       
T  37169180 aaaatcacttatttatattgaattagagagaaaaaggtgaaga-gaggtgatttcaggtaaaaaattgatccaaaatcacccctcaatgaagaaact--- 37169085  T
Q  128 agaaaaaacctagagag 144  Q
     ||||||||||||||||    
T  37169084 tgaaaaaacctagagag 37169068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 26 - 159
Target Start/End: Original strand, 50611540 - 50611672
Alignment:
Q  26 tgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacactg 125  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||| | ||||  | | || | |||||||||||||| |  |||||||||| ||      
T  50611540 tgaaaatcacttatttagattgaaatatagagaaaaagatgaagagggg-tgattttaggtcaataattgacccaaaaccatctctcaatgaagaaacaa 50611638  T
Q  126 taagaaaaaacctagagagtgaaaactagagccg 159  Q
    ||||| ||||| || ||||  |||||||||||||    
T  50611639 taagagaaaacttaaagagaaaaaactagagccg 50611672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 24 - 120
Target Start/End: Original strand, 49552344 - 49552439
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaaga 120  Q
    ||||||| |||||||||||||||||| |||||| |||| |||||||| ||||| ||||| | | || | ||||||||||||||||| ||||||||||    
T  49552344 tgtgaaattcacttatttagattgaaatagagaaaaaatgatgaaga-ggggtgatttcaggtcaagaattgacccaaaaccacccatcaatgaaga 49552439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 3850576 - 3850626
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggg 74  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  3850576 tgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagagggg 3850626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 46178526 - 46178481
Alignment:
Q  28 aaaatcacttatttagattgaattagagagaaaaagatgaagaggg 73  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  46178526 aaaagcacttatttagattgaattagagagaaaaagatgaagaggg 46178481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 38 - 163
Target Start/End: Original strand, 51202384 - 51202508
Alignment:
Q  38 atttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacactgtaagaaaaaacc 137  Q
    |||||||||||| |||||||||||| ||||||| ||| | ||||| | | || | ||||||||||| ||||| ||||| |||| ||||||||| ||||||    
T  51202384 atttagattgaaatagagagaaaaatatgaagatggg-tgatttcaggtcaagaattgacccaaaatcacccctcaataaagaaactgtaagagaaaacc 51202482  T
Q  138 tagagagtgaaaactagagccgactt 163  Q
    || ||||  |||||||  ||||||||    
T  51202483 taaagagaaaaaactaaggccgactt 51202508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 22802971 - 22802927
Alignment:
Q  28 aaaatcacttatttagattgaattagagagaaaaagatgaagagg 72  Q
    |||||||||||||||||||||| ||||||||||||||||||||||    
T  22802971 aaaatcacttatttagattgaaatagagagaaaaagatgaagagg 22802927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 70
Target Start/End: Complemental strand, 17237756 - 17237710
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaaga 70  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||    
T  17237756 tgtgaaaatcacttatttagattgaaatagagagaaacagatgaaga 17237710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 70
Target Start/End: Complemental strand, 21488064 - 21488019
Alignment:
Q  25 gtgaaaatcacttatttagattgaattagagagaaaaagatgaaga 70  Q
    |||||| |||||||||||||||||| | ||||||||||||||||||    
T  21488064 gtgaaagtcacttatttagattgaaatggagagaaaaagatgaaga 21488019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 141
Target Start/End: Original strand, 36735277 - 36735389
Alignment:
Q  28 aaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacactgta 127  Q
    ||||||||||||||| |||||| || ||||| ||| ||||||| ||| | ||||| | |||||| |||||| |||||||||  |||||||||| |||  |    
T  36735277 aaaatcacttatttaaattgaaatatagagagaaaaatgaaga-gggatgatttcaggtaaaaaattgaccaaaaaccacctctcaatgaagaaactaga 36735375  T
Q  128 agaaaaaacctaga 141  Q
    ||| ||||| ||||    
T  36735376 agagaaaacttaga 36735389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 70
Target Start/End: Complemental strand, 29503416 - 29503370
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaaga 70  Q
    ||||||||||| |||||||||||||| || ||||||||| |||||||    
T  29503416 tgtgaaaatcaattatttagattgaaatatagagaaaaatatgaaga 29503370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 31794033 - 31793996
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaa 61  Q
    |||||||||||||||||||||||||| |||||| ||||    
T  31794033 tgtgaaaatcacttatttagattgaaatagagaaaaaa 31793996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 88 - 141
Target Start/End: Original strand, 47980852 - 47980905
Alignment:
Q  88 aaaatttgacccaaaaccacccttcaatgaagacactgtaagaaaaaacctaga 141  Q
    |||| ||||||||||||||||  |||||||||| |||| |||| ||||||||||    
T  47980852 aaaaattgacccaaaaccaccactcaatgaagaaactgcaagagaaaacctaga 47980905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 88 - 141
Target Start/End: Original strand, 47990139 - 47990192
Alignment:
Q  88 aaaatttgacccaaaaccacccttcaatgaagacactgtaagaaaaaacctaga 141  Q
    |||| ||||||||||||||||  |||||||||| |||| |||| ||||||||||    
T  47990139 aaaaattgacccaaaaccaccactcaatgaagaaactgcaagagaaaacctaga 47990192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 88 - 141
Target Start/End: Original strand, 47999426 - 47999479
Alignment:
Q  88 aaaatttgacccaaaaccacccttcaatgaagacactgtaagaaaaaacctaga 141  Q
    |||| ||||||||||||||||  |||||||||| |||| |||| ||||||||||    
T  47999426 aaaaattgacccaaaaccaccactcaatgaagaaactgcaagagaaaacctaga 47999479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 88 - 141
Target Start/End: Original strand, 48008713 - 48008766
Alignment:
Q  88 aaaatttgacccaaaaccacccttcaatgaagacactgtaagaaaaaacctaga 141  Q
    |||| ||||||||||||||||  |||||||||| |||| |||| ||||||||||    
T  48008713 aaaaattgacccaaaaccaccactcaatgaagaaactgcaagagaaaacctaga 48008766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 144
Target Start/End: Complemental strand, 25849711 - 25849655
Alignment:
Q  88 aaaatttgacccaaaaccacccttcaatgaagacactgtaagaaaaaacctagagag 144  Q
    |||| ||||| ||||||||||| ||||| ||||  ||| ||||||||||||||||||    
T  25849711 aaaaattgactcaaaaccacccctcaattaagaagctggaagaaaaaacctagagag 25849655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 62
Target Start/End: Complemental strand, 42719472 - 42719436
Alignment:
Q  26 tgaaaatcacttatttagattgaattagagagaaaaa 62  Q
    ||||||||||||||||| |||||| ||||||||||||    
T  42719472 tgaaaatcacttatttaaattgaaatagagagaaaaa 42719436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 73; Significance: 2e-33; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 24 - 163
Target Start/End: Original strand, 19716018 - 19716155
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    |||||||||||||||||||||||||| || |||||||||||||||||||| |  ||||| ||| || | ||||||||||||||||  |||||||||| |     
T  19716018 tgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagggtg--atttcagatcaagaattgacccaaaaccacctctcaatgaagaaat 19716115  T
Q  124 tgtaagaaaaaacctagagagtgaaaactagagccgactt 163  Q
    |||||||||||||||| |||| ||||||||| ||||||||    
T  19716116 tgtaagaaaaaacctaaagagagaaaactagggccgactt 19716155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 18569431 - 18569550
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||   ||| |||||   | |||| ||||||||||||||||| |||||||||| ||    
T  18569431 tgtgaaaatcacttatttagattgaaatagagagaaaaagatgaaga-caggtgatttcttgtcaaaaattgacccaaaaccacccctcaatgaagaaac 18569529  T
Q  124 tgtaagaaaaaacctagagag 144  Q
    || |||| |||||||||||||    
T  18569530 tggaagagaaaacctagagag 18569550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 19 - 144
Target Start/End: Original strand, 30818461 - 30818585
Alignment:
Q  19 atttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaa 118  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||||  |||| ||||| | | || | |||||||||||| |||| ||||||||    
T  30818461 atttatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaaga-tgggtgatttcaggtcaataattgacccaaaactacccctcaatgaa 30818559  T
Q  119 gacactgtaagaaaaaacctagagag 144  Q
    || ||||||| | ||||| |||||||    
T  30818560 gaaactgtaaaagaaaacttagagag 30818585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 24 - 163
Target Start/End: Original strand, 35584742 - 35584880
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    |||||||||||||||||||||||||| || |||||||||||||||||  | || ||||| | | || | ||||||||||| ||||| |||||||||| |     
T  35584742 tgtgaaaatcacttatttagattgaaataaagagaaaaagatgaaga-tgagtgatttcaggttaagaattgacccaaaatcacccctcaatgaagaaat 35584840  T
Q  124 tgtaagaaaaaacctagagagtgaaaactagagccgactt 163  Q
    ||||||| ||||||||||||  ||||||||| || |||||    
T  35584841 tgtaagagaaaacctagagaaagaaaactagggcggactt 35584880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 25 - 159
Target Start/End: Complemental strand, 40646647 - 40646514
Alignment:
Q  25 gtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacact 124  Q
    ||||||||||||||||||||||||| || | ||||||||||||||| | | | ||||  | | || | ||||||||||||||||| |||||||||| | |    
T  40646647 gtgaaaatcacttatttagattgaaataaatagaaaaagatgaagatgag-tgattttaggtcaagaattgacccaaaaccacccctcaatgaagaaatt 40646549  T
Q  125 gtaagaaaaaacctagagagtgaaaactagagccg 159  Q
    |||||| ||||||||||||| ||||||||| ||||    
T  40646548 gtaagagaaaacctagagagagaaaactagggccg 40646514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 163
Target Start/End: Original strand, 33291534 - 33291678
Alignment:
Q  19 atttttgtgaaaatcacttatttagattgaattagagagaaaaaga-tgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatga 117  Q
    |||| ||||||||||||||||||| |||||| |||| ||||||| | |||||||||| | ||||| | | || | ||||||||||||||||| |||||||    
T  33291534 atttatgtgaaaatcacttatttatattgaaatagaaagaaaaaaaatgaagagggg-tgatttcaggtcaagaattgacccaaaaccacccctcaatga 33291632  T
Q  118 agacactgtaagaaaaaacctagagagtgaaaactagagccgactt 163  Q
    | | ||| |||||||||| |||||||  ||||||||| ||||||||    
T  33291633 aaaaactataagaaaaaatctagagaaagaaaactagggccgactt 33291678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 24 - 136
Target Start/End: Original strand, 50272261 - 50272372
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    ||||||||| |||||||||||||||| || ||||||||||||||| | ||||| ||||| | | || | |||||||||||||||||||||||||||| |     
T  50272261 tgtgaaaattacttatttagattgaaataaagagaaaaagatgaata-ggggtgatttcaggtcaagaattgacccaaaaccacccttcaatgaagaaat 50272359  T
Q  124 tgtaagaaaaaac 136  Q
    ||||||| |||||    
T  50272360 tgtaagagaaaac 50272372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 24 - 163
Target Start/End: Complemental strand, 51871824 - 51871687
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||||| | ||||  | | || | |||||||||||||||||  ||||||||| ||    
T  51871824 tgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagagggg-tgattttaggtcaagaattgacccaaaaccacccc-caatgaagaaac 51871727  T
Q  124 tgtaagaaaaaacctagagagtgaaaactagagccgactt 163  Q
       |||| ||||||||||||| ||||| ||| ||||||||    
T  51871726 gagaagagaaaacctagagagagaaaattagggccgactt 51871687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 150
Target Start/End: Original strand, 51868766 - 51868891
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||| ||||| ||||| | | || | || ||||||||||||||  ||||||||| ||    
T  51868766 tgtgaaagtcacttatttagattgaaatagagagaaaaagatgaaga-ggggtgatttcaggtcaagaattaacccaaaaccaccccccaatgaagaaac 51868864  T
Q  124 tgtaagaaaaaacctagagagtgaaaa 150  Q
     | |||| |||||||| |||| |||||    
T  51868865 gggaagagaaaacctaaagagagaaaa 51868891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 38520654 - 38520773
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaacca-cccttcaatgaagaca 122  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||  | || ||||| | |||||| |||| ||||||||| ||| | |||||||| |    
T  38520654 tgtgaaaatcacttatttagatcgaaatagagagaaaaagatgaaga-tgagtgatttcaggtaaaaaattgatccaaaaccacccccttaatgaagaaa 38520752  T
Q  123 ctgtaagaaaaaacctagaga 143  Q
    ||| |||| ||||||||||||    
T  38520753 ctgaaagagaaaacctagaga 38520773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 24 - 159
Target Start/End: Complemental strand, 5701217 - 5701083
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    ||||||||||||||||||| |||||| || ||||||||||||||||| ||||| ||||| | | ||   ||||||||||  ||||| ||||| |||| |     
T  5701217 tgtgaaaatcacttatttaaattgaaataaagagaaaaagatgaaga-ggggtgatttcaggtcaagtattgacccaaagtcacccctcaataaagaaat 5701119  T
Q  124 tgtaagaaaaaacctagagagtgaaaactagagccg 159  Q
    ||||||| ||||| ||||||| ||||||||| ||||    
T  5701118 tgtaagagaaaacttagagagagaaaactagggccg 5701083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 32 - 159
Target Start/End: Complemental strand, 7342674 - 7342548
Alignment:
Q  32 tcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacactgtaagaa 131  Q
    |||||||||||||||||| |||| | ||||| ||||||||||| | ||||| | | |||| |||||||||||||||||  ||||||||| || | ||||     
T  7342674 tcacttatttagattgaaatagataaaaaaatatgaagagggg-tgatttcaggtcaaaaattgacccaaaaccaccccccaatgaagaaacgggaagag 7342576  T
Q  132 aaaacctagagagtgaaaactagagccg 159  Q
    ||||||||||||| ||||| ||| ||||    
T  7342575 aaaacctagagagagaaaattagggccg 7342548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 25406405 - 25406523
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||| | | ||||| | | || | ||||||||||| |||||  ||||||||| ||    
T  25406405 tgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagaggtg-tgatttcaggtcaagaattgacccaaaatcaccccccaatgaagaaac 25406503  T
Q  124 tgtaagaaaaaacctagaga 143  Q
     | |||||||||| ||||||    
T  25406504 gggaagaaaaaacttagaga 25406523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 25 - 144
Target Start/End: Original strand, 40881135 - 40881253
Alignment:
Q  25 gtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacact 124  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||  | || ||||  | | || | |||||||||||||| || |||||||||| ||     
T  40881135 gtgaaaatcactcatttagattgaaatagagagaaaaagatgaaga-tgagtgattttaggtcaagaattgacccaaaaccatccctcaatgaagaaacg 40881233  T
Q  125 gtaagaaaaaacctagagag 144  Q
    |||||| |||||||||||||    
T  40881234 gtaagagaaaacctagagag 40881253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 25 - 163
Target Start/End: Original strand, 5324679 - 5324816
Alignment:
Q  25 gtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacact 124  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| | ||| ||| | | | || | ||||||||||| || || |||||||||| |||    
T  5324679 gtgaaaatcacttatttagattgaaatagagagaaaaagatgaaga-gaggtgattccaggtcaagaattgacccaaaatcatccctcaatgaagaaact 5324777  T
Q  125 gtaagaaaaaacctagagagtgaaaactagagccgactt 163  Q
      |||| |||| |||||||| ||||| ||| || |||||    
T  5324778 tgaagagaaaatctagagagagaaaattagggctgactt 5324816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 24 - 130
Target Start/End: Original strand, 25728080 - 25728185
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||| | | ||||| | | || | ||||||||||||||||| ||| |||||| |     
T  25728080 tgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaggag-tgatttcaggtcaagaattgacccaaaaccacccgtcattgaagaaat 25728178  T
Q  124 tgtaaga 130  Q
    |||||||    
T  25728179 tgtaaga 25728185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 24 - 154
Target Start/End: Complemental strand, 50148332 - 50148203
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    ||||||||||||||||||||||| || || |||||||| |||||||| ||  | ||||| |||  | | ||||||||||||||||| |||||||||| |     
T  50148332 tgtgaaaatcacttatttagattaaaataaagagaaaaggatgaagatgga-tgatttcagatctagaattgacccaaaaccacccctcaatgaagaaat 50148234  T
Q  124 tgtaagaaaaaacctagagagtgaaaactag 154  Q
    | ||||| |||| |||||||| |||||||||    
T  50148233 tataagagaaaatctagagagagaaaactag 50148203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 24 - 150
Target Start/End: Original strand, 50166220 - 50166344
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    ||||||| |||||||||||||||||| |||| |||||||||| |||| |||| |||||| | | || | |||||||||||||||||  ||||||||| ||    
T  50166220 tgtgaaattcacttatttagattgaaatagatagaaaaagataaaga-ggggcaatttcaggtcaataattgacccaaaaccaccc-ccaatgaagaaac 50166317  T
Q  124 tgtaagaaaaaacctagagagtgaaaa 150  Q
     | |||| ||||||||||||| |||||    
T  50166318 gggaagagaaaacctagagagagaaaa 50166344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 24 - 108
Target Start/End: Complemental strand, 3871369 - 3871285
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacc 108  Q
    |||||||||||||||||||||||||| | |||||| ||||||||| ||||||| ||||| ||| || | || |||||||||||||    
T  3871369 tgtgaaaatcacttatttagattgaaattgagagagaaagatgaaaagggggtgatttcagatcaagaattaacccaaaaccacc 3871285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 24 - 136
Target Start/End: Complemental strand, 30879035 - 30878924
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    ||||||||||||||||||||||| || || ||||||||||||||||| | | | || || | | |||| ||||||||||||||||| |||||||||| |     
T  30879035 tgtgaaaatcacttatttagattaaaataaagagaaaaagatgaaga-gagatgatctcaggtcaaaaattgacccaaaaccacccctcaatgaagaaat 30878937  T
Q  124 tgtaagaaaaaac 136  Q
    ||||||| |||||    
T  30878936 tgtaagagaaaac 30878924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 9919345 - 9919299
Alignment:
Q  28 aaaatcacttatttagattgaattagagagaaaaagatgaagagggg 74  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  9919345 aaaatcacttatttagattgaaatagagagaaaaagatgaagagggg 9919299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 70
Target Start/End: Complemental strand, 28035099 - 28035053
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaaga 70  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||    
T  28035099 tgtgaaaatcacttatttagattgaaatagagagaaaaagatgaaga 28035053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 45805925 - 45806014
Alignment:
Q  19 atttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccaccc 109  Q
    |||| ||||||| |||||||||||||||||| |||||||||||||| |||||   ||| ||||| ||| |||| |||||||||||||||||    
T  45805925 atttatgtgaaagtcacttatttagattgaaatagagagaaaaagaggaaga-aaggtgatttcagatcaaaaattgacccaaaaccaccc 45806014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 24 - 109
Target Start/End: Complemental strand, 7997747 - 7997663
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccaccc 109  Q
    ||||||||||||||||||| |||||| || |||||||||||||||||  |||| ||||| ||| |||| || ||||||||||||||    
T  7997747 tgtgaaaatcacttatttatattgaaataaagagaaaaagatgaaga-agggtgatttcagatcaaaaattaacccaaaaccaccc 7997663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 24 - 109
Target Start/End: Complemental strand, 20266262 - 20266178
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccaccc 109  Q
    |||||||||||||||||||||||||| || |||||||||||||||||  |||| ||||  ||| || | |||||||||||||||||    
T  20266262 tgtgaaaatcacttatttagattgaaataaagagaaaaagatgaaga-tgggtgattttagatcaagaattgacccaaaaccaccc 20266178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 24 - 109
Target Start/End: Complemental strand, 27872699 - 27872615
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccaccc 109  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||  |||| |||||   | |||| |||||||||||||||||    
T  27872699 tgtgaaaatcacttatttagattgaaatagagcgaaaaagatgaaga-tgggtgatttcatgtcaaaaattgacccaaaaccaccc 27872615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 45426183 - 45426303
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaacca-cccttcaatgaagaca 122  Q
    ||||||||||||||||||||||| || |||||||||||||||||| |   ||| |||||  || || | |||||||||||||| ||| |||||||||| |    
T  45426183 tgtgaaaatcacttatttagatttaaatagagagaaaaagatgaa-aataggtgatttcaaatcaagaattgacccaaaaccaccccctcaatgaagaaa 45426281  T
Q  123 ctgtaagaaaaaacctagagag 144  Q
    ||| || | |||||||||||||    
T  45426282 ctggaaaagaaaacctagagag 45426303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 120
Target Start/End: Complemental strand, 9172448 - 9172353
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaaga 120  Q
    ||||||| |||||||||||||||||| |||||| ||||| ||||||| ||||| ||||| | | || | |||||||||||||||||  |||||||||    
T  9172448 tgtgaaagtcacttatttagattgaaatagagaaaaaaatatgaaga-ggggtgatttcaggtcaagaattgacccaaaaccaccccccaatgaaga 9172353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 120
Target Start/End: Complemental strand, 9180430 - 9180335
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaaga 120  Q
    ||||||| |||||||||||||||||| |||||| ||||| ||||||| ||||| ||||| | | || | |||||||||||||||||  |||||||||    
T  9180430 tgtgaaagtcacttatttagattgaaatagagaaaaaaatatgaaga-ggggtgatttcaggtcaagaattgacccaaaaccaccccccaatgaaga 9180335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 19723293 - 19723176
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaag-atgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagaca 122  Q
    ||||||||||||||||||||||||||| |||||||||||  |||||||| || | |||||   | || | |||||||||||||||||| ||||||||| |    
T  19723293 tgtgaaaatcacttatttagattgaat-agagagaaaaaatatgaagagagg-tgatttcaagtcaataattgacccaaaaccaccct-caatgaagaaa 19723197  T
Q  123 ctgtaagaaaaaacctagaga 143  Q
    || ||||| ||||||||||||    
T  19723196 ctataagagaaaacctagaga 19723176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 28 - 71
Target Start/End: Complemental strand, 39987346 - 39987303
Alignment:
Q  28 aaaatcacttatttagattgaattagagagaaaaagatgaagag 71  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  39987346 aaaatcacttatttagattgaatcagagagaaaaagatgaagag 39987303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 135
Target Start/End: Original strand, 7312220 - 7312329
Alignment:
Q  25 gtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacact 124  Q
    |||||||||| |||||||  ||||| |||||||||||||||||||||  | ||||||  | | |||| |||||||||||| |||| |||||||||| |||    
T  7312220 gtgaaaatcatttatttaatttgaaatagagagaaaaagatgaagagaag-taattttaggtcaaaaattgacccaaaactacccctcaatgaagaaact 7312318  T
Q  125 gtaagaaaaaa 135  Q
    | || ||||||    
T  7312319 ggaaaaaaaaa 7312329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 70
Target Start/End: Complemental strand, 14545480 - 14545434
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaaga 70  Q
    |||||||||||||||||||||||||| || |||||||||||||||||    
T  14545480 tgtgaaaatcacttatttagattgaaatatagagaaaaagatgaaga 14545434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 11453896 - 11453776
Alignment:
Q  24 tgtgaaaatcacttatttagattgaatt--agagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagac 121  Q
    |||||||| ||||||||||||||||| |  |||||||||||||||||||  | || |||||   | |||| ||||||  |||||| || ||||||||||     
T  11453896 tgtgaaaaccacttatttagattgaaatagagagagaaaaagatgaaga--gagtgatttcaagtcaaaaattgaccagaaaccatccctcaatgaagaa 11453799  T
Q  122 actgtaagaaaaaacctagagag 144  Q
    |||| |||| |||||||||||||    
T  11453798 actgaaagagaaaacctagagag 11453776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 63
Target Start/End: Complemental strand, 34519093 - 34519054
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaag 63  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  34519093 tgtgaaaatcacttatttagattgaaatagagagaaaaag 34519054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 18649993 - 18650044
Alignment:
Q  14 cctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagat 65  Q
    ||||||||| ||||||||| |||||||||||| ||| ||||||| |||||||    
T  18649993 cctatatttatgtgaaaattacttatttagatcgaaatagagaggaaaagat 18650044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 5156029 - 5155985
Alignment:
Q  26 tgaaaatcacttatttagattgaattagagagaaaaagatgaaga 70  Q
    ||||||||||||||||| ||| ||| |||||||| ||||||||||    
T  5156029 tgaaaatcacttatttacattaaatgagagagaagaagatgaaga 5155985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 7e-33; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 24 - 163
Target Start/End: Original strand, 9498723 - 9498860
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    |||||||||||||||||||||||||| || ||| ||||||||||||||||| | ||||| | ||| |||| ||||||||||||||| |||||||||| |     
T  9498723 tgtgaaaatcacttatttagattgaaataaagataaaaagatgaagagggg-tgatttcaggtaagaatt-gacccaaaaccacccctcaatgaagaaat 9498820  T
Q  124 tgtaagaaaaaacctagagagtgaaaactagagccgactt 163  Q
    ||||||| ||||||||||||| ||||||||| ||||||||    
T  9498821 tgtaagagaaaacctagagagagaaaactagggccgactt 9498860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 24 - 159
Target Start/End: Original strand, 9619479 - 9619613
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    |||||||||||||||||||||||||| || ||||||||||||||||| ||||| ||||| | | || | ||||||||||||||||| |||||||||| |     
T  9619479 tgtgaaaatcacttatttagattgaaataaagagaaaaagatgaaga-ggggtgatttcaggtcaagaattgacccaaaaccacccctcaatgaagaaat 9619577  T
Q  124 tgtaagaaaaaacctagagagtgaaaactagagccg 159  Q
    ||||||| |||| |||||||| ||||||||||||||    
T  9619578 tgtaagagaaaatctagagagagaaaactagagccg 9619613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 28 - 163
Target Start/End: Original strand, 43890250 - 43890384
Alignment:
Q  28 aaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacactgta 127  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| | | ||||  ||| |||||||||||| |||||||||| | ||||    
T  43890250 aaaatcacttatttagattgaattaaagagaaaaagatgaaga-ggggtgatttcaggtcaaaaaatgatccaaaaccacccctcaatgaagaaattgta 43890348  T
Q  128 agaaaaaacctagagagtgaaaactagagccgactt 163  Q
    ||| ||||||||||||| ||||||||| ||||||||    
T  43890349 agagaaaacctagagagagaaaactagggccgactt 43890384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 28 - 144
Target Start/End: Complemental strand, 33342396 - 33342281
Alignment:
Q  28 aaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacactgta 127  Q
    ||||||||||||||||||||||||||||| |||| |||||||| ||||| ||||| | | |||| ||||||||||||||||| |||||||||| |||  |    
T  33342396 aaaatcacttatttagattgaattagagaaaaaaggatgaaga-ggggtgatttcaggttaaaaattgacccaaaaccacccctcaatgaagaaactcga 33342298  T
Q  128 agaaaaaacctagagag 144  Q
    |||||||||||||||||    
T  33342297 agaaaaaacctagagag 33342281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 29 - 160
Target Start/End: Original strand, 42448154 - 42448284
Alignment:
Q  29 aaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacactgtaa 128  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||| ||||| | | || | || |||||||||||||| |||||||  | |||||||    
T  42448154 aaatcacttatttagattgaaatagagagaaaaagatgaaga-ggggtgatttcaggtcaagaattaacccaaaaccacccctcaatgacaaaactgtaa 42448252  T
Q  129 gaaaaaacctagagagtgaaaactagagccga 160  Q
    || ||||||||||||| ||||||||| |||||    
T  42448253 gacaaaacctagagagagaaaactagggccga 42448284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 24 - 153
Target Start/End: Complemental strand, 17949210 - 17949082
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    |||||||||| ||||||||||||||| ||||||||||||| |||||| ||||| ||||| | | || | ||||||||||| ||||| |||||||||| ||    
T  17949210 tgtgaaaatcgcttatttagattgaaatagagagaaaaaggtgaaga-ggggtgatttcaggtcaataattgacccaaaatcacccatcaatgaagaaac 17949112  T
Q  124 tgtaagaaaaaacctagagagtgaaaacta 153  Q
    ||||||| | ||||||||||| ||||||||    
T  17949111 tgtaagagacaacctagagagagaaaacta 17949082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 159
Target Start/End: Complemental strand, 11725645 - 11725511
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    |||||||| ||||||||||||||||| || ||||||||||| ||||||||| | ||||| | | || | ||||||||||||||||| |||||||||| ||    
T  11725645 tgtgaaaaacacttatttagattgaaataaagagaaaaagacgaagagggg-tgatttcaggtcaagaattgacccaaaaccacccctcaatgaagaaac 11725547  T
Q  124 tgtaagaaaaaacctagagagtgaaaactagagccg 159  Q
    || |||| |||| |||||||| ||||||||| ||||    
T  11725546 tgaaagagaaaatctagagagagaaaactagggccg 11725511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 44577999 - 44577880
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    |||| |||||||||| |||||||||| |||||||||||||||||||||| | | ||||  | | |||| ||||||||||||||||| |||||||||| ||    
T  44577999 tgtgtaaatcacttagttagattgaaatagagagaaaaagatgaagaggag-tgattttaggtcaaaaattgacccaaaaccacccctcaatgaagaaac 44577901  T
Q  124 tgtaagaaaaaacctagagag 144  Q
     |||||| |||||||||||||    
T  44577900 agtaagagaaaacctagagag 44577880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 24 - 159
Target Start/End: Original strand, 44100053 - 44100187
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    ||||||||| |||||||||||||||| || ||||||||||||||||| ||||| ||||  | | || | | ||||||||||||||| |||||||||| ||    
T  44100053 tgtgaaaataacttatttagattgaaatatagagaaaaagatgaaga-ggggtgattttaggtcaagaatcgacccaaaaccacccctcaatgaagaaac 44100151  T
Q  124 tgtaagaaaaaacctagagagtgaaaactagagccg 159  Q
     | |||| ||||||||||||| ||||||||| ||||    
T  44100152 cgaaagagaaaacctagagagagaaaactagggccg 44100187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 24 - 154
Target Start/End: Original strand, 14907045 - 14907174
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    |||||||||||||||||||||||||| || |||||||||||||||||  |||| ||||| | | || | |||| |||||| || || |||||||||| |     
T  14907045 tgtgaaaatcacttatttagattgaaataaagagaaaaagatgaaga-tgggtgatttcaggtcaagaattgatccaaaatcatccctcaatgaagaaat 14907143  T
Q  124 tgtaagaaaaaacctagagagtgaaaactag 154  Q
    ||||||| ||||||||||||| |||||||||    
T  14907144 tgtaagagaaaacctagagagagaaaactag 14907174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 24 - 136
Target Start/End: Complemental strand, 4808927 - 4808816
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    ||||||||||||||||||| |||||| || ||| ||||||||||||| ||||||||||| | | || | ||||||||||||||||| |||||||||| |     
T  4808927 tgtgaaaatcacttatttacattgaaataaagaaaaaaagatgaaga-ggggtaatttcaggtcaagaattgacccaaaaccacccctcaatgaagaaat 4808829  T
Q  124 tgtaagaaaaaac 136  Q
    ||||||| |||||    
T  4808828 tgtaagagaaaac 4808816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 24 - 163
Target Start/End: Original strand, 32724610 - 32724749
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgat-aaaaatttgacccaaaacca-cccttcaatgaagac 121  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||| |  || ||||| | | || ||||||||||||||||| ||| |||||| |||     
T  32724610 tgtgaaaatcacttatttagattgaaatagagag-aaaagatgaaga-gaagtgatttcaggtcaataatttgacccaaaaccaccccctcaatggagaa 32724707  T
Q  122 actgtaagaaaaaacctagagagtgaaaactagagccgactt 163  Q
    ||||||||| |||||| |||||| ||||||||| | ||||||    
T  32724708 actgtaagagaaaacccagagagagaaaactagggtcgactt 32724749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 24 - 163
Target Start/End: Complemental strand, 35580421 - 35580282
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccaccct-tcaatgaagaca 122  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||  | || ||||    | |||| |||||||||||||||||| |||||||||| |    
T  35580421 tgtgaaaatcacttatttaaattgaaatagagagaaaaagatgaaga-tgagtgattttatgtcaaaaattgacccaaaaccaccctctcaatgaagaaa 35580323  T
Q  123 ctgtaagaaaaaacctagagagtgaaaactagagccgactt 163  Q
     || ||||||||||||| ||||  |||| ||| ||||||||    
T  35580322 ttggaagaaaaaacctaaagagaaaaaattagggccgactt 35580282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 9072685 - 9072585
Alignment:
Q  19 atttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaa 118  Q
    |||| ||||||| ||||||||||| |||||| |||||||||||||||||||| ||||| |||||   | |||| |||||||||||||||||  |||||||    
T  9072685 atttatgtgaaagtcacttatttaaattgaaatagagagaaaaagatgaaga-ggggtgatttcaagtcaaaaattgacccaaaaccaccccccaatgaa 9072587  T
Q  119 ga 120  Q
    ||    
T  9072586 ga 9072585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 144
Target Start/End: Complemental strand, 28239792 - 28239676
Alignment:
Q  28 aaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaacca-cccttcaatgaagacactgt 126  Q
    |||| ||||||||||||||||| |||||||||||||||||||| | ||| ||||| | | |||| ||||||||||| || ||| |||||||||| | ||     
T  28239792 aaaaacacttatttagattgaaatagagagaaaaagatgaaga-gaggtgatttcaggtcaaaaattgacccaaaatcaccccctcaatgaagaaaatgg 28239694  T
Q  127 aagaaaaaacctagagag 144  Q
    |||| |||||||||||||    
T  28239693 aagagaaaacctagagag 28239676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 24 - 140
Target Start/End: Complemental strand, 2655832 - 2655717
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    |||||||||||||||||||||||||| || |||||||||||||||||  |||| ||| | | | || | ||||||||||||||||  |||||||||| |     
T  2655832 tgtgaaaatcacttatttagattgaaataaagagaaaaagatgaaga-tgggtgattgcaggtcaagaattgacccaaaaccaccgctcaatgaagaaat 2655734  T
Q  124 tgtaagaaaaaacctag 140  Q
    ||||||| |||| ||||    
T  2655733 tgtaagagaaaaactag 2655717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 24 - 154
Target Start/End: Complemental strand, 11196853 - 11196726
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    ||||||||||||||||||||||||||  | |||||||||||||||||  || | ||||| | | || | ||||||||||||||||| |||| ||||| ||    
T  11196853 tgtgaaaatcacttatttagattgaa--atagagaaaaagatgaaga-tggatgatttcaggtcaagaattgacccaaaaccacccctcaacgaagaaac 11196757  T
Q  124 tgtaagaaaaaacctagagagtgaaaactag 154  Q
    |  |||| |||| |||||||| |||||||||    
T  11196756 tagaagagaaaaactagagagagaaaactag 11196726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 24 - 159
Target Start/End: Complemental strand, 33896044 - 33895911
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    ||||||| ||||||||||||||| || ||||||||||||||||||||||||  | |||  ||| || | |||||||||||||||||  ||||||||| ||    
T  33896044 tgtgaaagtcacttatttagatttaaatagagagaaaaagatgaagaggggtgacttta-gatcaagaattgacccaaaaccacccc-caatgaagaaac 33895947  T
Q  124 tgtaagaaaaaacctagagagtgaaaactagagccg 159  Q
       |||| ||||||||||||| ||||| ||| ||||    
T  33895946 gcgaagagaaaacctagagagagaaaattagggccg 33895911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 70
Target Start/End: Complemental strand, 16794252 - 16794210
Alignment:
Q  28 aaaatcacttatttagattgaattagagagaaaaagatgaaga 70  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  16794252 aaaatcacttatttagattgaattagagagaaaaagatgaaga 16794210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 140
Target Start/End: Complemental strand, 34611777 - 34611652
Alignment:
Q  14 cctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttca 113  Q
    |||| |||| ||||||||||||||||||||| |||| |||| ||||||| |||||||  | || ||||| | | || | ||||||||||||||||| ||     
T  34611777 cctagatttatgtgaaaatcacttatttagactgaaatagaaagaaaaatatgaaga-tgagtgatttcaggtcaagaattgacccaaaaccacccctcg 34611679  T
Q  114 atgaagacactgtaagaaaaaacctag 140  Q
    ||||||| ||||||||| |||| ||||    
T  34611678 atgaagaaactgtaagagaaaaactag 34611652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 163
Target Start/End: Complemental strand, 29777181 - 29777054
Alignment:
Q  35 cttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacactgtaagaaaaa 134  Q
    ||||||||||||||| |||||||||||||||||||| || || |||||   | || | ||||||||||||||| |  ||||||||| || | | || |||    
T  29777181 cttatttagattgaaatagagagaaaaagatgaaga-ggagtgatttcatgtcaataattgacccaaaaccactcaccaatgaagaaacaggatgagaaa 29777083  T
Q  135 acctagagagtgaaaactagagccgactt 163  Q
    |||||||||| ||||| ||| ||||||||    
T  29777082 acctagagagagaaaattagggccgactt 29777054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 24 - 154
Target Start/End: Original strand, 15597287 - 15597417
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattaga-gagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagaca 122  Q
    |||||||||||||||||||||||||| | ||  ||||||||||||||| ||||| ||||| | | |||| |||||  |||||||||| ||||| || | |    
T  15597287 tgtgaaaatcacttatttagattgaaatggactagaaaaagatgaaga-ggggtgatttcaggtcaaaaattgactgaaaaccacccctcaataaaaata 15597385  T
Q  123 ctgtaagaaaaaacctagagagtgaaaactag 154  Q
    ||| |||| |||||||| ||||  ||||||||    
T  15597386 ctggaagagaaaacctatagagaaaaaactag 15597417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 24 - 115
Target Start/End: Complemental strand, 19876175 - 19876085
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaat 115  Q
    |||||||||||||||||||||||||| ||  ||||||||||||||||  | |||||||| | | || | ||||||||||||||||| |||||    
T  19876175 tgtgaaaatcacttatttagattgaaatattgagaaaaagatgaaga-tgagtaatttcaggtcaagaattgacccaaaaccacccctcaat 19876085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 156
Target Start/End: Complemental strand, 18733980 - 18733852
Alignment:
Q  28 aaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacc-cttcaatgaagacactgt 126  Q
    ||||||| ||||||| |||||| ||||||||||||||||||||     | ||||| | ||||||||||||||| ||||||| | ||||| |||| | ||     
T  18733980 aaaatcaattatttaaattgaaatagagagaaaaagatgaaga-atactgatttcggttaaaaatttgacccacaaccacctcctcaataaagaaaatgg 18733882  T
Q  127 aagaaaaaacctagagagtgaaaactagag 156  Q
    |||| |  |||||||||| |||||||||||    
T  18733881 aagagaggacctagagagagaaaactagag 18733852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 144
Target Start/End: Original strand, 27747225 - 27747352
Alignment:
Q  16 tatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaat 115  Q
    ||||||| ||||||||| ||||||||| |||||| | |||| |||||||||||||   ||| |||||   | |||| |||||||||||| |||| | |||    
T  27747225 tatatttatgtgaaaattacttatttaaattgaaatggagataaaaagatgaaga-atggtgatttcaagtcaaaaattgacccaaaactaccccttaat 27747323  T
Q  116 gaagacactgtaagaaaaaacctagagag 144  Q
    |||||   || |||| |||||||||||||    
T  27747324 gaagaagttggaagagaaaacctagagag 27747352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 56
Target Start/End: Complemental strand, 33298819 - 33298787
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagaga 56  Q
    |||||||||||||||||||||||||||||||||    
T  33298819 tgtgaaaatcacttatttagattgaattagaga 33298787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 25241718 - 25241767
Alignment:
Q  19 atttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaa 68  Q
    |||| ||||| ||||||||||| |||||||| |||| |||||||||||||    
T  25241718 atttatgtgacaatcacttattgagattgaaatagaaagaaaaagatgaa 25241767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 72; Significance: 7e-33; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 24 - 163
Target Start/End: Complemental strand, 30371683 - 30371545
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||| | ||||| | | |||  ||||||||||||||||| |||||||||| |     
T  30371683 tgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagggg-tgatttcaggtcaaatattgacccaaaaccacccctcaatgaagaaat 30371585  T
Q  124 tgtaagaaaaaacctagagagtgaaaactagagccgactt 163  Q
    ||||||| |||||||||| || ||||||||| ||||||||    
T  30371584 tgtaagagaaaacctagatagagaaaactagggccgactt 30371545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 163
Target Start/End: Original strand, 27266981 - 27267119
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||| ||||| ||||| | | || | ||||||||||||||||||||  |||||| ||    
T  27266981 tgtgaaaatcacttatttagattgaaatagagagaaaaatatgaaga-ggggtgatttcaggtcaagaattgacccaaaaccacccttcggtgaagaaac 27267079  T
Q  124 tgtaagaaaaaacctagagagtgaaaactagagccgactt 163  Q
     | |||| ||||||||||||| ||||||||| ||||||||    
T  27267080 gggaagagaaaacctagagagagaaaactagggccgactt 27267119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 163
Target Start/End: Original strand, 19281065 - 19281203
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||  |||| ||||||| | |||| || ||||||||||||||  ||||||||| ||    
T  19281065 tgtgaaagtcacttatttagattgaaatagagagaaaaagatgaaga-tgggtgatttccggtcaaaaatttacccaaaaccaccccccaatgaagaaac 19281163  T
Q  124 tgtaagaaaaaacctagagagtgaaaactagagccgactt 163  Q
     | | || ||||||||||||| ||||| ||| ||||||||    
T  19281164 gggatgagaaaacctagagagagaaaattagggccgactt 19281203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 163
Target Start/End: Complemental strand, 34881668 - 34881531
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||| | ||| ||||| | | || | |||||||| |||||||| |||||| ||| ||    
T  34881668 tgtgaaaatcacttatttagattgaaatagagag-aaaagatgaaga-gaggtgatttcaggtcaagaattgacccagaaccacccctcaatggagaaac 34881571  T
Q  124 tgtaagaaaaaacctagagagtgaaaactagagccgactt 163  Q
    ||||||| ||||||| ||||| ||||||||| ||||||||    
T  34881570 tgtaagagaaaacctggagagagaaaactagggccgactt 34881531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 24 - 142
Target Start/End: Original strand, 18677587 - 18677704
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    ||||||||||||||||||||||| || |||||||||||||||||||| ||| | ||||| ||| || | ||||||||||||||||| |||||||||| ||    
T  18677587 tgtgaaaatcacttatttagattaaaatagagagaaaaagatgaaga-gggatgatttcagatcaataattgacccaaaaccacccctcaatgaagaaac 18677685  T
Q  124 tgtaagaaaaaacctagag 142  Q
     |||| | |||||||||||    
T  18677686 ggtaaaagaaaacctagag 18677704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 24 - 159
Target Start/End: Complemental strand, 7241741 - 7241607
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||||| |  |||| | | || | |||||||||||||||||  ||||||||| ||    
T  7241741 tgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagagggg-tggtttcaggttaagaattgacccaaaaccaccccccaatgaagaaac 7241643  T
Q  124 tgtaagaaaaaacctagagagtgaaaactagagccg 159  Q
     | |||| ||||||||||||| ||||| ||| ||||    
T  7241642 gggaagagaaaacctagagagagaaaattagggccg 7241607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 24 - 159
Target Start/End: Complemental strand, 7246917 - 7246783
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||||| |  |||| | | || | |||||||||||||||||  ||||||||| ||    
T  7246917 tgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagagggg-tggtttcaggttaagaattgacccaaaaccaccccccaatgaagaaac 7246819  T
Q  124 tgtaagaaaaaacctagagagtgaaaactagagccg 159  Q
     | |||| ||||||||||||| ||||| ||| ||||    
T  7246818 gggaagagaaaacctagagagagaaaattagggccg 7246783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 154
Target Start/End: Original strand, 7150456 - 7150585
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||| ||||| ||||| | | |||| || | ||||||||| ||   |||||||| ||    
T  7150456 tgtgaaagtcacttatttagattgaaatagagagaaaaagatgaaga-ggggtgatttcaggtcaaaaattaatccaaaaccatccccgaatgaagaaac 7150554  T
Q  124 tgtaagaaaaaacctagagagtgaaaactag 154  Q
     | |||| ||||||||||||| |||||||||    
T  7150555 gggaagagaaaacctagagagagaaaactag 7150585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 154
Target Start/End: Original strand, 21060402 - 21060531
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    |||||||||||||||||||||||||| || ||||||||||||||||| | ||| ||||| ||| || | ||||||||||||||||  || ||||| |  |    
T  21060402 tgtgaaaatcacttatttagattgaaatatagagaaaaagatgaaga-gtggtgatttcagatcaagaattgacccaaaaccaccactcgatgaaaaatc 21060500  T
Q  124 tgtaagaaaaaacctagagagtgaaaactag 154  Q
    |  |||| ||||||||||||| |||||||||    
T  21060501 tagaagagaaaacctagagagagaaaactag 21060531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 24 - 121
Target Start/End: Complemental strand, 10649412 - 10649316
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagac 121  Q
    |||||||||||||||||||||||||| || ||||||||||||||||| ||||| ||||| | | || | ||||||||||| ||||| |||||||||||    
T  10649412 tgtgaaaatcacttatttagattgaaataaagagaaaaagatgaaga-ggggtgatttcaggtcaagaattgacccaaaatcacccctcaatgaagac 10649316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 24 - 154
Target Start/End: Complemental strand, 42579839 - 42579707
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaaga---tgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaaga 120  Q
    |||||||||||||||||||||||||| |||| ||||||| |   |||| ||||| | |||||   | || | ||||||||||||||||| |||||| |||    
T  42579839 tgtgaaaatcacttatttagattgaaatagaaagaaaaaaaaaatgaaaagggg-tgatttcatgtcaataattgacccaaaaccacccctcaatggaga 42579741  T
Q  121 cactgtaagaaaaaacctagagagtgaaaactag 154  Q
     ||||||||| ||||||||||||| |||||||||    
T  42579740 aactgtaagagaaaacctagagagagaaaactag 42579707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 24 - 142
Target Start/End: Complemental strand, 28235544 - 28235427
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    |||||||||||||||||||||| ||| |||| ||||||||||||||||||| | ||||| | | ||   ||||||||||||||||| ||||| |||| ||    
T  28235544 tgtgaaaatcacttatttagatcgaaatagaaagaaaaagatgaagagggg-tgatttcaggtcaatgattgacccaaaaccacccctcaataaagaaac 28235446  T
Q  124 tgtaagaaaaaacctagag 142  Q
    || |||| |||| ||||||    
T  28235445 tggaagagaaaatctagag 28235427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 24 - 163
Target Start/End: Original strand, 36344610 - 36344748
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    ||||||||| |||||||||||||||| || ||||||||||||||||| ||||| ||||  | | || | | ||| ||||||||||| |||||||||| |     
T  36344610 tgtgaaaataacttatttagattgaaatatagagaaaaagatgaaga-ggggtgattttaggtcaagaatcgactcaaaaccacccctcaatgaagaaat 36344708  T
Q  124 tgtaagaaaaaacctagagagtgaaaactagagccgactt 163  Q
    || |||| |||| ||||||||  |||| ||| ||||||||    
T  36344709 tggaagagaaaatctagagagaaaaaattagggccgactt 36344748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 2057959 - 2058009
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggg 74  Q
    |||||||||||||||||||||||||| || |||||||||||||||||||||    
T  2057959 tgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagggg 2058009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 154
Target Start/End: Complemental strand, 26578208 - 26578079
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    |||||||||||||||||||||||||| || |||||||||||||||||  | || ||||| | | || | |||||| ||||||| || ||||| |||| |     
T  26578208 tgtgaaaatcacttatttagattgaaataaagagaaaaagatgaaga-tgagtgatttcaggtcaagaattgaccaaaaaccatccatcaataaagaaat 26578110  T
Q  124 tgtaagaaaaaacctagagagtgaaaactag 154  Q
    ||||||| |||| || ||||| |||||||||    
T  26578109 tgtaagagaaaatctggagagagaaaactag 26578079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 159
Target Start/End: Original strand, 7887053 - 7887192
Alignment:
Q  19 atttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaa 118  Q
    |||| ||||||||||||||||||||||| || ||||||| |||||| ||||| ||| | ||||| | | || | | ||||||||||||||| || |||||    
T  7887053 atttatgtgaaaatcacttatttagattaaaatagagaggaaaagacgaaga-gggatgatttcaggtcaagaatggacccaaaaccacccctcgatgaa 7887151  T
Q  119 gacactgtaagaaaaaacctagagagtgaaaactagagccg 159  Q
    || |||| |||| ||||  |||| || ||||||||| ||||    
T  7887152 gaaactggaagagaaaagttagaaagagaaaactagggccg 7887192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 28 - 144
Target Start/End: Original strand, 19259938 - 19260050
Alignment:
Q  28 aaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacactgta 127  Q
    |||||||||||||||||||||| |||||||||||||    |   ||||| ||||| | | || | ||||||||||||||||| |||| ||||| || |||    
T  19259938 aaaatcacttatttagattgaaatagagagaaaaag----aattggggtgatttcaggtcaagaattgacccaaaaccacccctcaacgaagaaaccgta 19260033  T
Q  128 agaaaaaacctagagag 144  Q
    ||| |||||||||||||    
T  19260034 agagaaaacctagagag 19260050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 43261938 - 43261984
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaaga 70  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||    
T  43261938 tgtgaaaatcacttatttagattgaaatagagataaaaagatgaaga 43261984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 161
Target Start/End: Original strand, 3271529 - 3271663
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    ||||||||||||||||||||||||||  |||||| |||||||||||| || || |||||   | || | |||||| |||| ||||| |||||||||| ||    
T  3271529 tgtgaaaatcacttatttagattgaaacagagag-aaaagatgaaga-ggagtgatttcatgtcaagaattgacctaaaatcaccc-tcaatgaagaaac 3271625  T
Q  124 tgtaagaaaaaacctagagagtgaaaactagagccgac 161  Q
    | ||||||||||  ||||||| ||||| ||| ||||||    
T  3271626 tataagaaaaaatttagagagagaaaattagggccgac 3271663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 781346 - 781302
Alignment:
Q  26 tgaaaatcacttatttagattgaattagagagaaaaagatgaaga 70  Q
    |||||||||||||||||||||||| || |||||||||||||||||    
T  781346 tgaaaatcacttatttagattgaaatatagagaaaaagatgaaga 781302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 16981249 - 16981201
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagg 72  Q
    |||| ||||||||||||||||||||| |||||||||||| |||||||||    
T  16981249 tgtgtaaatcacttatttagattgaaatagagagaaaaatatgaagagg 16981201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 20257815 - 20257855
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaaga 64  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  20257815 tgtgaaaatcacttatttagattgaaatagagagaaaaaga 20257855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 70
Target Start/End: Complemental strand, 11767762 - 11767720
Alignment:
Q  28 aaaatcacttatttagattgaattagagagaaaaagatgaaga 70  Q
    |||||||||||||||||||||| || |||||||||||||||||    
T  11767762 aaaatcacttatttagattgaaatatagagaaaaagatgaaga 11767720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 15570864 - 15570819
Alignment:
Q  28 aaaatcacttatttagattgaattagagagaaaaagatgaagaggg 73  Q
    |||||||  |||||||||||||||| ||||||||||||||||||||    
T  15570864 aaaatcaaatatttagattgaattatagagaaaaagatgaagaggg 15570819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 116
Target Start/End: Original strand, 35475457 - 35475548
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatg 116  Q
    |||||||||||||||||||||||||| || ||| || |||||||||| | ||| ||||| ||| || | || |||||||| ||||| ||||||    
T  35475457 tgtgaaaatcacttatttagattgaaatatagataacaagatgaaga-gaggtgatttcagatcaagaattaacccaaaatcacccctcaatg 35475548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 14211160 - 14211110
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggg 74  Q
    ||||||||||||||||||||||||||  | || |||||||||| |||||||    
T  14211160 tgtgaaaatcacttatttagattgaaagaaagggaaaaagatgcagagggg 14211110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 27576470 - 27576516
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaaga 70  Q
    |||||| |||||||||||| |||||| ||||||||||| ||||||||    
T  27576470 tgtgaatatcacttatttacattgaaatagagagaaaaggatgaaga 27576516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 70
Target Start/End: Complemental strand, 42886438 - 42886392
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaaga 70  Q
    |||||||| ||||||||| ||||||| ||||||||||| ||||||||    
T  42886438 tgtgaaaagcacttattttgattgaaatagagagaaaaggatgaaga 42886392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 70
Target Start/End: Original strand, 1582243 - 1582288
Alignment:
Q  25 gtgaaaatcacttatttagattgaattagagagaaaaagatgaaga 70  Q
    |||||||||||||||||||||| || | |||||||||| |||||||    
T  1582243 gtgaaaatcacttatttagattaaaatggagagaaaaatatgaaga 1582288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 70
Target Start/End: Complemental strand, 1602572 - 1602527
Alignment:
Q  25 gtgaaaatcacttatttagattgaattagagagaaaaagatgaaga 70  Q
    |||||||||||||||||||||| || | |||||||||| |||||||    
T  1602572 gtgaaaatcacttatttagattaaaatggagagaaaaatatgaaga 1602527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 30298167 - 30298130
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaa 61  Q
    |||||||||||||||||||||||||| || ||||||||    
T  30298167 tgtgaaaatcacttatttagattgaaatatagagaaaa 30298130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 88 - 153
Target Start/End: Original strand, 35676259 - 35676324
Alignment:
Q  88 aaaatttgacccaaaaccacccttcaatgaagacactgtaagaaaaaacctagagagtgaaaacta 153  Q
    |||| |||| ||||||||||||||||||||||| || |||||| ||||   |||||| ||||||||    
T  35676259 aaaaattgatccaaaaccacccttcaatgaagaaacagtaagagaaaattcagagagagaaaacta 35676324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 68
Target Start/End: Complemental strand, 43148689 - 43148645
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaa 68  Q
    ||||||| |||||||||||||| ||| ||||||||||| ||||||    
T  43148689 tgtgaaagtcacttatttagatcgaaatagagagaaaaggatgaa 43148645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 7e-33; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 29 - 163
Target Start/End: Complemental strand, 4643821 - 4643686
Alignment:
Q  29 aaatcacttatttagattgaattagagagaaaaagatgaagag-ggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacactgta 127  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||| | | |||| || ||| |||||||||| |||||||||| ||||||    
T  4643821 aaatcacttatttagattgaaatagagagaaaaagatgaagaggggggtgatttcaggtcaaaaattcacctaaaaccacccctcaatgaagagactgta 4643722  T
Q  128 agaaaaaacctagagagtgaaaactagagccgactt 163  Q
    ||| |||||||||| || ||||||||| ||||||||    
T  4643721 agagaaaacctagaaagagaaaactagggccgactt 4643686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 38706831 - 38706950
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||  |||| ||||  ||| || | ||||||||||||||||| |||||||||| ||    
T  38706831 tgtgaaaatcacttatttagattgaaatagagagaaaaagatgaaga-agggtgattttagatcaagaattgacccaaaaccacccctcaatgaagaaac 38706929  T
Q  124 tgtaagaaaaaacctagagag 144  Q
     ||||||||||||||||||||    
T  38706930 agtaagaaaaaacctagagag 38706950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 159
Target Start/End: Complemental strand, 43444361 - 43444227
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    |||||||||||||||||||||||||| || ||||||||||||||||| ||| | ||||| ||| |||| |||||||||||| |||| |||||||||  |     
T  43444361 tgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagatggg-tgatttcagatcaaaaattgacccaaaactacccctcaatgaaggaat 43444263  T
Q  124 tgtaagaaaaaacctagagagtgaaaactagagccg 159  Q
    ||||||| ||||||||||||| ||||||||| ||||    
T  43444262 tgtaagagaaaacctagagagagaaaactagggccg 43444227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 24 - 163
Target Start/End: Original strand, 9528999 - 9529137
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    |||||||||||||||||||||||||| || |||||||||||| |||| ||||| ||||| | | || | ||||||||||||||||| ||| |||||| ||    
T  9528999 tgtgaaaatcacttatttagattgaaataaagagaaaaagataaaga-ggggtgatttcaggtcaagaattgacccaaaaccacccctcagtgaagaaac 9529097  T
Q  124 tgtaagaaaaaacctagagagtgaaaactagagccgactt 163  Q
    ||||||| |||||||| ||||  |||||||| ||||||||    
T  9529098 tgtaagagaaaacctaaagagataaaactagggccgactt 9529137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 154
Target Start/End: Complemental strand, 1531875 - 1531745
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagaga-aaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagaca 122  Q
    |||||||||||||||||||||||||| |||||||| ||||||| |||| ||||| ||||| | | || | ||||||||| ||||||| |||||||||| |    
T  1531875 tgtgaaaatcacttatttagattgaaatagagagagaaaagataaaga-ggggtgatttcaggtcaagaattgacccaataccacccctcaatgaagaaa 1531777  T
Q  123 ctgtaagaaaaaacctagagagtgaaaactag 154  Q
    |||||||| |||||||||| || |||||||||    
T  1531776 ctgtaagagaaaacctagaaagagaaaactag 1531745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 28 - 163
Target Start/End: Complemental strand, 9283875 - 9283741
Alignment:
Q  28 aaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacactgta 127  Q
    |||||||||||||||||||||| || |||||||| |||||||||||| | ||||| | | ||   ||||||||||||||||| |||||||||| | ||||    
T  9283875 aaaatcacttatttagattgaaataaagagaaaacgatgaagagggg-tgatttcaggttaagtattgacccaaaaccacccctcaatgaagaaattgta 9283777  T
Q  128 agaaaaaacctagagagtgaaaactagagccgactt 163  Q
    ||| | ||||||||||| ||||||||| ||||||||    
T  9283776 agagataacctagagagagaaaactagggccgactt 9283741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 159
Target Start/End: Original strand, 10389874 - 10390008
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||  | || ||||| | | || | ||||||||||||||||| |||||||||| ||    
T  10389874 tgtgaaagtcacttatttagattgaaatagagagaaaaagatgaaga-tgagtgatttcaggtcaagaattgacccaaaaccacccctcaatgaagaaac 10389972  T
Q  124 tgtaagaaaaaacctagagagtgaaaactagagccg 159  Q
    | ||||| |||||||||| || ||||||||| ||||    
T  10389973 tataagagaaaacctagaaagagaaaactagggccg 10390008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 159
Target Start/End: Complemental strand, 20569220 - 20569086
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    ||||||||||| |||||||||||||| || ||||||||| ||||||||||| | ||||| | | || | ||||||||||||||||| |||||||||| |     
T  20569220 tgtgaaaatcatttatttagattgaaataaagagaaaaaaatgaagagggg-tgatttcaggttaagaattgacccaaaaccacccatcaatgaagaaat 20569122  T
Q  124 tgtaagaaaaaacctagagagtgaaaactagagccg 159  Q
    | || |||||||||||||| | ||||||||||||||    
T  20569121 tatacgaaaaaacctagagggagaaaactagagccg 20569086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 28 - 143
Target Start/End: Original strand, 35965100 - 35965214
Alignment:
Q  28 aaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacactgta 127  Q
    ||||||||||||| |||||||| |||||||||||||||||||| | ||| ||||| | |||||| ||||||||||||||||| ||||||||||  ||| |    
T  35965100 aaaatcacttattcagattgaaatagagagaaaaagatgaaga-gaggtgatttcaggtaaaaaattgacccaaaaccacccctcaatgaagaatctgga 35965198  T
Q  128 agaaaaaacctagaga 143  Q
    ||| ||||||||||||    
T  35965199 agagaaaacctagaga 35965214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 34024557 - 34024676
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||| ||||| ||||| | | || | |||| |||||||||||| |||||||||| ||    
T  34024557 tgtgaaaataacttatttagattgaaatagagagaaaaagatgaaga-ggggtgatttcaggtcaagaattgatccaaaaccacccctcaatgaagaaac 34024655  T
Q  124 tgtaagaaaaaacctagagag 144  Q
    |  ||||||||| ||||||||    
T  34024656 taaaagaaaaaatctagagag 34024676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 24 - 159
Target Start/End: Original strand, 9645670 - 9645804
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    ||||||| |||||||||||||||||| |||||| ||||||||||||||||| | || || | | || | |||||||||||| |||| |||||||||| ||    
T  9645670 tgtgaaagtcacttatttagattgaaatagagacaaaaagatgaagagggg-tgatatcaggtcaagaattgacccaaaacgacccctcaatgaagaaac 9645768  T
Q  124 tgtaagaaaaaacctagagagtgaaaactagagccg 159  Q
    ||||||| ||| ||||||||  ||||||||| ||||    
T  9645769 tgtaagataaagcctagagaaagaaaactagggccg 9645804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 24 - 153
Target Start/End: Complemental strand, 21090121 - 21089992
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaacca-cccttcaatgaagaca 122  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||  | || ||||| ||| |||  |||||||||||||| ||| |||||||||| |    
T  21090121 tgtgaaaatcacttatttatattgaaatagagagaaaaagatgaaga-tgagtgatttcagatcaaagattgacccaaaaccaccccctcaatgaagaaa 21090023  T
Q  123 ctgtaagaaaaaacctagagagtgaaaacta 153  Q
    ||  |||| ||||||||||||| ||||||||    
T  21090022 ctagaagagaaaacctagagagagaaaacta 21089992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 24 - 153
Target Start/End: Original strand, 2115709 - 2115837
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    |||||||||||||||||||||||||| || |||||||||||||||||    || ||||| | | || | ||||||||||||||||| |||||||| | |     
T  2115709 tgtgaaaatcacttatttagattgaaataaagagaaaaagatgaaga-aaagtgatttcaggtcaataattgacccaaaaccacccctcaatgaataaat 2115807  T
Q  124 tgtaagaaaaaacctagagagtgaaaacta 153  Q
    |||||||||||| |||||||| ||||||||    
T  2115808 tgtaagaaaaaatctagagagagaaaacta 2115837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 24 - 141
Target Start/End: Complemental strand, 47416852 - 47416736
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||| | |||||   | || | ||||||||||| ||||| |||||||||| |     
T  47416852 tgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagggg-tgatttcaagtcaataattgacccaaaatcacccctcaatgaagaaat 47416754  T
Q  124 tgtaagaaaaaacctaga 141  Q
    ||||||| ||||||||||    
T  47416753 tgtaagagaaaacctaga 47416736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 24 - 159
Target Start/End: Complemental strand, 25273848 - 25273709
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaa-----agatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaa 118  Q
    |||||||||||||||||||||||||| |||||||||||     ||||||||||||| | ||||| | | || | |||| |||||||||||| |||||| |    
T  25273848 tgtgaaaatcacttatttagattgaaatagagagaaaagatgaagatgaagagggg-tgatttcaggtcaagaattgatccaaaaccacccctcaatgga 25273750  T
Q  119 gacactgtaagaaaaaacctagagagtgaaaactagagccg 159  Q
    || ||||||||| |||| |||||||| ||||||||| ||||    
T  25273749 gaaactgtaagagaaaatctagagagagaaaactagggccg 25273709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 150
Target Start/End: Original strand, 31381792 - 31381917
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    ||||||||||||||||||| ||||||  ||||||||||||||| ||| ||||| ||||| | | || | ||||||||||||||||| |||| ||||| ||    
T  31381792 tgtgaaaatcacttatttaaattgaaaaagagagaaaaagatg-agaaggggtgatttcaggtcaagaattgacccaaaaccacccatcaacgaagaaac 31381890  T
Q  124 tgtaagaaaaaacctagagagtgaaaa 150  Q
     |||||| |||| |||||||| |||||    
T  31381891 cgtaagagaaaatctagagagagaaaa 31381917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 159
Target Start/End: Original strand, 50766630 - 50766766
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatga--agac 121  Q
    ||||||||||| |||||||||||||| || ||||||||||||||||| ||| | ||||| ||| || | ||||||||||||||||  |||||||  |||     
T  50766630 tgtgaaaatcatttatttagattgaaataaagagaaaaagatgaaga-gggatgatttcagatcaagaattgacccaaaaccacctctcaatgaagagaa 50766728  T
Q  122 actgtaagaaaaaacctagagagtgaaaactagagccg 159  Q
    | ||||||| |||||||||||||  |||||||| ||||    
T  50766729 attgtaagagaaaacctagagagaaaaaactagggccg 50766766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 32 - 159
Target Start/End: Complemental strand, 6972769 - 6972644
Alignment:
Q  32 tcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacactgtaagaa 131  Q
    |||||||||||||||||| || ||| ||||||||||||| | ||| ||||| ||| || | |||||||||||||||||  ||||||||| || | |||||    
T  6972769 tcacttatttagattgaaatacagataaaaagatgaaga-gaggtgatttcagatcaagaattgacccaaaaccaccc-ccaatgaagaaaccggaagaa 6972672  T
Q  132 aaaacctagagagtgaaaactagagccg 159  Q
    ||||||||||||| ||||| ||| ||||    
T  6972671 aaaacctagagagagaaaattagggccg 6972644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 24 - 163
Target Start/End: Original strand, 43154142 - 43154279
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||| | |||||   | || | ||||||||||||||||  |||||| | | |     
T  43154142 tgtgaaaatcacttatttagattgaaatagagagaaaa-gatgaagagggg-tgatttcaagtcaagaattgacccaaaaccacctctcaatggataaat 43154239  T
Q  124 tgtaagaaaaaacctagagagtgaaaactagagccgactt 163  Q
    ||||||| |||||||| |||| ||||||||| ||| ||||    
T  43154240 tgtaagataaaacctaaagagagaaaactagggccaactt 43154279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 24 - 159
Target Start/End: Original strand, 53616772 - 53616906
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    |||||||||||||||||||||||||| || |||||||| |||||||| | ||| ||||| | | || | ||||||||||  ||||| |||| ||||| |     
T  53616772 tgtgaaaatcacttatttagattgaaataaagagaaaacgatgaaga-gtggtgatttcaggtcaagaattgacccaaagtcacccctcaacgaagaaat 53616870  T
Q  124 tgtaagaaaaaacctagagagtgaaaactagagccg 159  Q
    ||||||| ||||||||||||| ||||| ||| ||||    
T  53616871 tgtaagagaaaacctagagagagaaaattagggccg 53616906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 28 - 144
Target Start/End: Original strand, 5333656 - 5333768
Alignment:
Q  28 aaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacactgta 127  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||| |  |||||   | |||| |||||||||||||||||  ||||||||| || | |    
T  5333656 aaaatcacttatttatattgaaatagagagaaaaagatgaagagggtg--atttcatgtcaaaaattgacccaaaaccaccc--caatgaagaaacggga 5333751  T
Q  128 agaaaaaacctagagag 144  Q
    ||| |||||||||||||    
T  5333752 agagaaaacctagagag 5333768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 144
Target Start/End: Original strand, 10359671 - 10359787
Alignment:
Q  28 aaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaacca-cccttcaatgaagacactgt 126  Q
    |||||||||||||||||| ||| |||||||||||||||||||   |||| ||||| | | |||| |||||||||||||| ||| |||||||||| ||||     
T  10359671 aaaatcacttatttagatcgaaatagagagaaaaagatgaag-ttgggtgatttcaggtcaaaaattgacccaaaaccaccccctcaatgaagaaactga 10359769  T
Q  127 aagaaaaaacctagagag 144  Q
    |||| |||| ||||||||    
T  10359770 aagagaaaatctagagag 10359787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 45 - 164
Target Start/End: Complemental strand, 868104 - 867986
Alignment:
Q  45 ttgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacactgtaagaaaaaacctagagag 144  Q
    ||||| |||||||||||||||||||||||| | |||||   | || | | |||| |||||||||| |||||||||| |||| |||| |||||||||||||    
T  868104 ttgaaatagagagaaaaagatgaagagggg-tgatttcatgtcaagaatcgacctaaaaccacccctcaatgaagaaactggaagagaaaacctagagag 868006  T
Q  145 tgaaaactagagccgacttt 164  Q
     ||||||||| |||| ||||    
T  868005 agaaaactagggccggcttt 867986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 24 - 159
Target Start/End: Original strand, 37188713 - 37188847
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    |||||||||||||||||||||||||| || |||||||||||||||||  | || ||||| | | || | ||||||||||||||| | || ||||| |  |    
T  37188713 tgtgaaaatcacttatttagattgaaatatagagaaaaagatgaaga-tgagtgatttcaggtcaataattgacccaaaaccactcctcgatgaaaaatc 37188811  T
Q  124 tgtaagaaaaaacctagagagtgaaaactagagccg 159  Q
    |  |||| ||||||||||||| ||||||||| ||||    
T  37188812 tagaagagaaaacctagagagagaaaactagggccg 37188847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 24 - 146
Target Start/End: Complemental strand, 51317954 - 51317832
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgat-aaaaatttgacccaaaaccacccttcaatgaagaca 122  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||  | || ||||| | | ||| | ||||||||||| ||||| |||||||||| |    
T  51317954 tgtgaaaatcacttatttagattgaaatagagagaaaaagatgaaga-tgagtgatttcaggtcaaagaattgacccaaaatcacccctcaatgaagaaa 51317856  T
Q  123 ctgtaagaaaaaacctagagagtg 146  Q
    ||  |||| | || ||||||||||    
T  51317855 ctagaagagacaatctagagagtg 51317832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 8009480 - 8009526
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaaga 70  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||    
T  8009480 tgtgaaaatcacttatttagattgaaatagagagaaaaagatgaaga 8009526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 93 - 163
Target Start/End: Complemental strand, 44947303 - 44947233
Alignment:
Q  93 ttgacccaaaaccacccttcaatgaagacactgtaagaaaaaacctagagagtgaaaactagagccgactt 163  Q
    ||||||||||||||||| |||||||||| ||||||||| ||||| ||||||| |||||||||  |||||||    
T  44947303 ttgacccaaaaccacccctcaatgaagaaactgtaagagaaaacttagagagagaaaactaggaccgactt 44947233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 159
Target Start/End: Original strand, 27593959 - 27594091
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    ||||||| || ||||||||||||||| || |||||||||||||||||||| |  |||||   | |||| |||||| |||| ||||| |||||||||| |     
T  27593959 tgtgaaactcgcttatttagattgaaatatagagaaaaagatgaagagggtg--atttcatgtcaaaaattgacctaaaatcacccatcaatgaaga-ag 27594055  T
Q  124 tgtaagaaaaaacctagagagtgaaaactagagccg 159  Q
    || |||| |||||||||||||  |||||||| ||||    
T  27594056 tggaagagaaaacctagagaggaaaaactagggccg 27594091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 56194567 - 56194519
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagg 72  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  56194567 tgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagagg 56194519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 14183772 - 14183729
Alignment:
Q  23 ttgtgaaaatcacttatttagattgaattagagagaaaaagatg 66  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  14183772 ttgtgaaaatcacttatttagattgaaatagagagaaaaagatg 14183729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 73
Target Start/End: Complemental strand, 49680505 - 49680456
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagaggg 73  Q
    |||||||||||||||||| ||||||| || ||||||||||||||||||||    
T  49680505 tgtgaaaatcacttatttggattgaaataaagagaaaaagatgaagaggg 49680456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 18139038 - 18139082
Alignment:
Q  28 aaaatcacttatttagattgaattagagagaaaaagatgaagagg 72  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||    
T  18139038 aaaatcacttatttagattgaaatagagagaaaatgatgaagagg 18139082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 49126251 - 49126295
Alignment:
Q  28 aaaatcacttatttagattgaattagagagaaaaagatgaagagg 72  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||    
T  49126251 aaaatcacttatttagattgaaatagagagaaaatgatgaagagg 49126295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 153
Target Start/End: Complemental strand, 50179671 - 50179611
Alignment:
Q  93 ttgacccaaaaccacccttcaatgaagacactgtaagaaaaaacctagagagtgaaaacta 153  Q
    ||||||||||||||||| |||||| ||| ||||||||| |||| |||||||| ||||||||    
T  50179671 ttgacccaaaaccacccctcaatggagaaactgtaagagaaaagctagagagagaaaacta 50179611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 1008268 - 1008221
Alignment:
Q  19 atttttgtgaaaatcacttatttagattgaattagagagaaaaagatg 66  Q
    |||| ||||||||||||||||||||||| || ||||||||||||||||    
T  1008268 atttatgtgaaaatcacttatttagattaaaatagagagaaaaagatg 1008221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 70
Target Start/End: Original strand, 5333584 - 5333626
Alignment:
Q  28 aaaatcacttatttagattgaattagagagaaaaagatgaaga 70  Q
    ||||||||||||||| |||||| ||||||||||||||||||||    
T  5333584 aaaatcacttatttatattgaaatagagagaaaaagatgaaga 5333626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 12265419 - 12265373
Alignment:
Q  28 aaaatcacttatttagattgaattagagagaaaaagatgaagagggg 74  Q
    |||||||||||||||||||||| ||| || |||||||||||||||||    
T  12265419 aaaatcacttatttagattgaaatagggataaaaagatgaagagggg 12265373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 62
Target Start/End: Complemental strand, 23100651 - 23100617
Alignment:
Q  28 aaaatcacttatttagattgaattagagagaaaaa 62  Q
    |||||||||||||||||||||||||||||||||||    
T  23100651 aaaatcacttatttagattgaattagagagaaaaa 23100617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 35261160 - 35261037
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagaga-gaaaaagatgaagaggg---ggtaatttccgataaaaatttgacccaaaaccacccttcaatgaag 119  Q
    |||||||||||||||||||||||| | || ||| |||||||||||||||||   | | ||||| | | |||| ||||||||||| ||||| |||||||||    
T  35261160 tgtgaaaatcacttatttagattgcaataaagaggaaaaagatgaagaggggatgattatttcaggtcaaaaattgacccaaaatcaccc-tcaatgaag 35261062  T
Q  120 acactgtaagaaaaaacctagagag 144  Q
    | ||   |||| |||||||||||||    
T  35261061 aaacgagaagagaaaacctagagag 35261037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 163
Target Start/End: Complemental strand, 29965568 - 29965505
Alignment:
Q  100 aaaaccacccttcaatgaagacactgtaagaaaaaacctagagagtgaaaactagagccgactt 163  Q
    |||||||||| |||||||| | | ||||||| ||||||||||||| ||||| ||| ||||||||    
T  29965568 aaaaccacccctcaatgaaaaaattgtaagagaaaacctagagagagaaaattagggccgactt 29965505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 32952867 - 32952913
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaaga 70  Q
    |||||||| ||||||||||  ||||| ||||||||||||||||||||    
T  32952867 tgtgaaaaacacttatttaatttgaaatagagagaaaaagatgaaga 32952913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 65
Target Start/End: Complemental strand, 21405481 - 21405440
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagat 65  Q
    ||||||||||||||| |||||||||| ||||||| |||||||    
T  21405481 tgtgaaaatcacttaattagattgaaatagagaggaaaagat 21405440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 29965602 - 29965565
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaa 61  Q
    |||||||||||||||||||||||||| || ||||||||    
T  29965602 tgtgaaaatcacttatttagattgaaataaagagaaaa 29965565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 68
Target Start/End: Complemental strand, 23329138 - 23329094
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaa 68  Q
    ||||||||||| |||||||| ||||| |||||| |||||||||||    
T  23329138 tgtgaaaatcagttatttaggttgaaatagagataaaaagatgaa 23329094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 60
Target Start/End: Original strand, 46991251 - 46991287
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaa 60  Q
    ||||||||||||| |||||||||||| ||||||||||    
T  46991251 tgtgaaaatcactcatttagattgaaatagagagaaa 46991287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 49072878 - 49072922
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaa 68  Q
    |||||||||||||||| ||||||||| || ||||||||| |||||    
T  49072878 tgtgaaaatcacttatatagattgaaataaagagaaaaatatgaa 49072922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 52098044 - 52098084
Alignment:
Q  28 aaaatcacttatttagattgaattagagagaaaaagatgaa 68  Q
    |||||||||||||||||||||| ||| ||||||| ||||||    
T  52098044 aaaatcacttatttagattgaaatagggagaaaaggatgaa 52098084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 1e-31; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 24 - 153
Target Start/End: Original strand, 27249272 - 27249400
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||| | ||||| | | ||   |||||||||||||||||||||||||||| |     
T  27249272 tgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagggg-tgatttcaggtcaagtattgacccaaaaccacccttcaatgaagaaat 27249370  T
Q  124 tgtaagaaaaaacctagagagtgaaaacta 153  Q
    ||||||| ||||||||||||| ||||||||    
T  27249371 tgtaagagaaaacctagagagagaaaacta 27249400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 159
Target Start/End: Complemental strand, 30420637 - 30420503
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    |||||||||||||||||||||||||| || ||||||||||||||||| ||||| ||||| | | |||| |||| |||||||||||| |||||||||| |     
T  30420637 tgtgaaaatcacttatttagattgaaataaagagaaaaagatgaaga-ggggtgatttcaggtcaaaaattgatccaaaaccacccctcaatgaagaaat 30420539  T
Q  124 tgtaagaaaaaacctagagagtgaaaactagagccg 159  Q
    ||||| ||||||||||||||| ||| ||||| ||||    
T  30420538 tgtaaaaaaaaacctagagagagaagactagggccg 30420503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 24 - 163
Target Start/End: Complemental strand, 36233965 - 36233827
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||| | ||||| | | |  | ||||||||||||||||| |||||||||| |     
T  36233965 tgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagggg-tgatttcaggtcatgaattgacccaaaaccacccctcaatgaagaaat 36233867  T
Q  124 tgtaagaaaaaacctagagagtgaaaactagagccgactt 163  Q
    || |||| |||| |||||||| ||||||||| ||||||||    
T  36233866 tgcaagagaaaatctagagagagaaaactagggccgactt 36233827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 24 - 154
Target Start/End: Complemental strand, 6173592 - 6173463
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||| | | || | | |||| |||||||||| |||||||||| ||    
T  6173592 tgtgaaaatcacttatttagattgaaatagagagaaaaagatgaagagggg-tgatttcaggtcaagaatagaccgaaaaccacccctcaatgaagaaac 6173494  T
Q  124 tgtaagaaaaaacctagagagtgaaaactag 154  Q
     |||| | ||||||||||||| |||||||||    
T  6173493 cgtaaaagaaaacctagagagagaaaactag 6173463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 24 - 154
Target Start/End: Original strand, 9986466 - 9986597
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaaga--tgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagac 121  Q
    ||||||||||||||||||||||||||||||||| ||||| |  |||||||||  | ||||| | | || | ||||||||||||||||| ||||||||||     
T  9986466 tgtgaaaatcacttatttagattgaattagagataaaaaaaattgaagaggga-tgatttcaggtcaagaattgacccaaaaccacccctcaatgaagaa 9986564  T
Q  122 actgtaagaaaaaacctagagagtgaaaactag 154  Q
    ||||||||| ||||||||||||| |||||||||    
T  9986565 actgtaagagaaaacctagagagagaaaactag 9986597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 163
Target Start/End: Original strand, 2808591 - 2808729
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    ||||||||||||||||||||| |||| |||||||||| ||||||||| ||||| ||||| | | || | ||||||||||||||||| |||||||||| |     
T  2808591 tgtgaaaatcacttatttagactgaaatagagagaaatagatgaaga-ggggtgatttcaggtcaagaattgacccaaaaccacccctcaatgaagaaaa 2808689  T
Q  124 tgtaagaaaaaacctagagagtgaaaactagagccgactt 163  Q
    || ||||||||||||||| |  ||||| ||| ||||||||    
T  2808690 tgaaagaaaaaacctagaaaaagaaaattagggccgactt 2808729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 150
Target Start/End: Original strand, 8971747 - 8971874
Alignment:
Q  24 tgtgaaaatcacttatttagattgaatta--gagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagac 121  Q
    ||||||||||||||||||||||| || ||  |||||||||||||||||||||  | ||||| | | || | ||||||||||||||||| ||||||||||     
T  8971747 tgtgaaaatcacttatttagattaaaataaagagagaaaaagatgaagaggga-tgatttcaggtcaagaattgacccaaaaccacccctcaatgaagaa 8971845  T
Q  122 actgtaagaaaaaacctagagagtgaaaa 150  Q
    |||||||||||||||||| |||| |||||    
T  8971846 actgtaagaaaaaacctaaagagagaaaa 8971874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 24 - 159
Target Start/End: Original strand, 21570529 - 21570663
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    |||||||||||||||||||||||||| || ||||||||||||||||| ||||| ||||| | | || | ||||||||||||||||  |||||||| |  |    
T  21570529 tgtgaaaatcacttatttagattgaaatatagagaaaaagatgaaga-ggggtgatttcaggtcaagaattgacccaaaaccaccactcaatgaaaaatc 21570627  T
Q  124 tgtaagaaaaaacctagagagtgaaaactagagccg 159  Q
    || |||| ||||||||||||  ||||||||| ||||    
T  21570628 tggaagagaaaacctagagacagaaaactagggccg 21570663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 24 - 159
Target Start/End: Complemental strand, 34598948 - 34598813
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| | | | ||||  | | || | |||| |||||||||||| |||| ||||| ||    
T  34598948 tgtgaaaatcacttatttagattgaaatagagagaaaaagatgaagatgagttgatttgaggtcaagaattgatccaaaaccacccctcaacgaagaaac 34598849  T
Q  124 tgtaagaaaaaacctagagagtgaaaactagagccg 159  Q
     |||||| ||||||||||||| ||||| ||| ||||    
T  34598848 ggtaagagaaaacctagagagagaaaattagggccg 34598813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 14 - 139
Target Start/End: Original strand, 459385 - 459509
Alignment:
Q  14 cctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttca 113  Q
    ||||||| | |||||||||| |||||||| | |||| ||||||||||| |||||||| ||||| ||||| | | |||| ||||||||||||||||| |||    
T  459385 cctatatctatgtgaaaatcgcttatttaaaatgaaatagagagaaaaggatgaaga-ggggtgatttcaggtcaaaaattgacccaaaaccacccctca 459483  T
Q  114 atgaagacactgtaagaaaaaaccta 139  Q
    ||||||| |||| |||| ||||||||    
T  459484 atgaagaaactggaagagaaaaccta 459509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 150
Target Start/End: Complemental strand, 45128164 - 45128040
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    ||||||| |||||||||||||||||| || ||||||||||||||||| ||||| ||||| | | || | ||||||||||||||||| |||||||||| |     
T  45128164 tgtgaaagtcacttatttagattgaaataaagagaaaaagatgaaga-ggggtgatttcaggtcaagaattgacccaaaaccaccc-tcaatgaagaaat 45128067  T
Q  124 tgtaagaaaaaacctagagagtgaaaa 150  Q
     | |||| ||||||||||||| |||||    
T  45128066 gggaagagaaaacctagagagagaaaa 45128040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 24 - 161
Target Start/End: Original strand, 40626148 - 40626284
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    |||||||||| ||||||||||||||| |||||||||||||| ||||| ||||| ||||| | | || | | ||||||||| ||||| ||||| |||| |     
T  40626148 tgtgaaaatcccttatttagattgaaatagagagaaaaagacgaaga-ggggtgatttcaggtcaagaatagacccaaaatcacccctcaattaagaaaa 40626246  T
Q  124 tgtaagaaaaaacctagagagtgaaaactagagccgac 161  Q
    || |||| |||||||| |||| ||||||||| ||||||    
T  40626247 tggaagagaaaacctaaagagagaaaactagggccgac 40626284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 24 - 154
Target Start/End: Original strand, 41712886 - 41713015
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    ||||||||||||||||||||||| || ||||||||||| |||||| | ||| | |||||   | || | || |||||||||||||| |||||||||| |     
T  41712886 tgtgaaaatcacttatttagattaaaatagagagaaaatgatgaaaatggg-tgatttcacgtcaagaattaacccaaaaccacccctcaatgaagaaat 41712984  T
Q  124 tgtaagaaaaaacctagagagtgaaaactag 154  Q
    ||||||| |||||||||| || |||||||||    
T  41712985 tgtaagagaaaacctagatagagaaaactag 41713015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 24 - 136
Target Start/End: Complemental strand, 3725141 - 3725030
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||| ||  | ||||  | | |||| ||||||||||||||||| ||||| |||| |     
T  3725141 tgtgaaaatcacttatttatattgaaatagagagaaaaagatgaaga-ggaatgattttaggtcaaaaattgacccaaaaccacccctcaataaagaaat 3725043  T
Q  124 tgtaagaaaaaac 136  Q
    ||||||| |||||    
T  3725042 tgtaagagaaaac 3725030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 24 - 72
Target Start/End: Original strand, 31581840 - 31581888
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagg 72  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  31581840 tgtgaaaatcacttatttagattgaaatagagagaaaaagatgaagagg 31581888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 24 - 91
Target Start/End: Original strand, 26025530 - 26025597
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaa 91  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||| ||||| ||||| ||| ||||    
T  26025530 tgtgaaaaccacttatttagattgaaatagagagaaaaagatgaagatggggtgatttcagatcaaaa 26025597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 44 - 159
Target Start/End: Original strand, 33229129 - 33229243
Alignment:
Q  44 attgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacactgtaagaaaaaacctagaga 143  Q
    |||||| |||||| |||||||||||||| || | ||||  | | || | |||||||||||||||||||||||||||| || |||||| ||||||||||||    
T  33229129 attgaaatagagaaaaaaagatgaagagagg-tgattttagctcaataattgacccaaaaccacccttcaatgaagaaacagtaagagaaaacctagaga 33229227  T
Q  144 gtgaaaactagagccg 159  Q
    | | ||||||| ||||    
T  33229228 gaggaaactagggccg 33229243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 4192799 - 4192749
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggg 74  Q
    |||||||||||||||||||||||||| || |||||||||||||||||||||    
T  4192799 tgtgaaaatcacttatttagattgaaatatagagaaaaagatgaagagggg 4192749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 24 - 153
Target Start/End: Original strand, 3270349 - 3270477
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    |||||||||||||||||||||||||| || | ||||||||||||| |  | || ||||| | | || | ||||||||||||||||| |||||||||| |     
T  3270349 tgtgaaaatcacttatttagattgaaataaaaagaaaaagatgaa-aatgagtgatttcaggtcaagaattgacccaaaaccacccctcaatgaagaaat 3270447  T
Q  124 tgtaagaaaaaacctagagagtgaaaacta 153  Q
     |||||| ||||| |||||||  |||||||    
T  3270448 cgtaagagaaaacttagagagaaaaaacta 3270477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 159
Target Start/End: Complemental strand, 25086986 - 25086862
Alignment:
Q  32 tcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacactgtaagaa 131  Q
    |||||||| |||||| || ||||  |||||||||||||||||| | ||||| | | || | ||||||||||||||||| | |||||||| || | ||||     
T  25086986 tcacttatatagattcaaatagatggaaaaagatgaagagggg-tgatttcaggtcaataattgacccaaaaccacccctaaatgaagaaaccggaagag 25086888  T
Q  132 aaaacctagagagtgaaaactagagccg 159  Q
    ||||||||||||  ||||||||||||||    
T  25086887 aaaacctagaga--gaaaactagagccg 25086862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 32 - 150
Target Start/End: Original strand, 20047211 - 20047327
Alignment:
Q  32 tcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacactgtaagaa 131  Q
    ||||||||||||||||||  ||||||||||||||||| |||| |  ||||| | | || | |||| ||||||| ||||  ||||||||| || ||||||     
T  20047211 tcacttatttagattgaaaaagagagaaaaagatgaatagggtg--atttcaggtcaagaattgatccaaaactaccccccaatgaagaaacggtaagag 20047308  T
Q  132 aaaacctagagagtgaaaa 150  Q
    ||||||||||||| |||||    
T  20047309 aaaacctagagagagaaaa 20047327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 27477115 - 27477065
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggg 74  Q
    ||||||||| |||||||||||||||| || |||||||||||||||||||||    
T  27477115 tgtgaaaattacttatttagattgaaatatagagaaaaagatgaagagggg 27477065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 32680703 - 32680749
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaaga 70  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||    
T  32680703 tgtgaaagtcacttatttagattgaaatagagagaaaaagatgaaga 32680749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 159
Target Start/End: Original strand, 40660052 - 40660183
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    ||||||||||||||||||||||||||  | |||||||||||||||||  | || ||||| | | || | ||||| ||||||||||| |||||||||| ||    
T  40660052 tgtgaaaatcacttatttagattgaa--atagagaaaaagatgaaga-tgtgtgatttcaggtcaagaattgactcaaaaccaccc-tcaatgaagaaac 40660147  T
Q  124 tgtaagaaaaaacctagagagtgaaaactagagccg 159  Q
    | ||||| |||| ||| | || ||||||||| ||||    
T  40660148 tctaagagaaaatctaaaaagagaaaactagggccg 40660183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 135
Target Start/End: Original strand, 7015831 - 7015941
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    ||||||||||| |||||||||||||| || |||||||||||| | || ||||| ||||| | | || | |||||||||||||| ||  ||||||||| |     
T  7015831 tgtgaaaatcaattatttagattgaaataaagagaaaaagattagga-ggggtgatttcaggtcaagaattgacccaaaaccaacccccaatgaagaaat 7015929  T
Q  124 tgtaagaaaaaa 135  Q
    ||||||| ||||    
T  7015930 tgtaagagaaaa 7015941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 144
Target Start/End: Original strand, 31581891 - 31581942
Alignment:
Q  93 ttgacccaaaaccacccttcaatgaagacactgtaagaaaaaacctagagag 144  Q
    ||||||||||||||||| |||||||||| || |||||| |||||||||||||    
T  31581891 ttgacccaaaaccacccctcaatgaagaaacagtaagagaaaacctagagag 31581942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 42949675 - 42949624
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagag-aaaaagatgaagagggg 74  Q
    |||||||||||||||||||||||||| || |||| |||||||||||||||||    
T  42949675 tgtgaaaatcacttatttagattgaaataaagagaaaaaagatgaagagggg 42949624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 39641980 - 39642026
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaaga 70  Q
    ||||||||||| ||||||| |||||| ||||||||||||||||||||    
T  39641980 tgtgaaaatcatttatttaaattgaaatagagagaaaaagatgaaga 39642026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 74
Target Start/End: Complemental strand, 41430978 - 41430938
Alignment:
Q  34 acttatttagattgaattagagagaaaaagatgaagagggg 74  Q
    |||||||||||||||| || |||||||||||||||||||||    
T  41430978 acttatttagattgaaatatagagaaaaagatgaagagggg 41430938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 70
Target Start/End: Complemental strand, 18695004 - 18694961
Alignment:
Q  28 aaaatcacttatttagattgaattagagaga-aaaagatgaaga 70  Q
    |||||||||||||||||||||| |||||||| ||||||||||||    
T  18695004 aaaatcacttatttagattgaaatagagagaaaaaagatgaaga 18694961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 70
Target Start/End: Complemental strand, 8805827 - 8805781
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaaga 70  Q
    ||||||||||||||||||| |||||| || ||||||||| |||||||    
T  8805827 tgtgaaaatcacttatttaaattgaaataaagagaaaaatatgaaga 8805781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 32913202 - 32913152
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggg 74  Q
    ||||||||||||||||||| |||||| || |||||||| ||| ||||||||    
T  32913202 tgtgaaaatcacttatttaaattgaaatatagagaaaaggatcaagagggg 32913152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 22421696 - 22421659
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaa 61  Q
    ||||||| |||||||||||||||||| |||||||||||    
T  22421696 tgtgaaagtcacttatttagattgaaatagagagaaaa 22421659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 68
Target Start/End: Complemental strand, 27949383 - 27949339
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaa 68  Q
    ||||||||||||||||||||||||||  |||| ||||| ||||||    
T  27949383 tgtgaaaatcacttatttagattgaaacagagcgaaaaggatgaa 27949339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 153
Target Start/End: Original strand, 361917 - 362043
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    ||||||||| |||||||||||||||| ||||||  |||||||| ||||||| | ||||| | | || | ||||| ||||||||||| |||||||||| ||    
T  361917 tgtgaaaattacttatttagattgaaatagaga--aaaagatggagagggg-tgatttcaggtcaagaattgactcaaaaccacccctcaatgaagaaac 362013  T
Q  124 tgtaagaaaaaacctagagagtgaaaacta 153  Q
    ||||||| |||||||| |||| ||||||||    
T  362014 tgtaagagaaaacctaaagagagaaaacta 362043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 8676 - 8557
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    |||||||||||||||||||||||||| |||||| ||||||||||| | ||||| |||||   | || | || |||||||||||||| |||||||||| ||    
T  8676 tgtgaaaatcacttatttagattgaaatagagataaaaagatgaa-aaggggtgatttcaagttaagaattaacccaaaaccacccctcaatgaagaaac 8578  T
Q  124 tgtaagaaaaaacctagagag 144  Q
    || |||| ||||||| |||||    
T  8577 tggaagagaaaacctggagag 8557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 32 - 143
Target Start/End: Complemental strand, 5346 - 5237
Alignment:
Q  32 tcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacactgtaagaa 131  Q
    |||||||||||||||||| |||||||| ||||||||||| ||||| ||||| | | || | |||||||||||||||||  ||||||||| || | ||||     
T  5346 tcacttatttagattgaagtagagagagaaagatgaaga-ggggtgatttcaggtcaagaattgacccaaaaccaccc-ccaatgaagaaacgggaagag 5249  T
Q  132 aaaacctagaga 143  Q
    ||||||||||||    
T  5248 aaaacctagaga 5237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0426 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 24 - 159
Target Start/End: Complemental strand, 6294 - 6161
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccacccttcaatgaagacac 123  Q
    |||||||||||||||||||||||| | |||||| ||||||||||||| ||||| ||||  | | || | ||||||  ||||||||| |||||||||| ||    
T  6294 tgtgaaaatcacttatttagattggaatagagaaaaaaagatgaaga-ggggtgattttaggtcaagaattgacctgaaaccaccc-tcaatgaagaaac 6197  T
Q  124 tgtaagaaaaaacctagagagtgaaaactagagccg 159  Q
    || |||| |||||||| |||| ||||| ||| ||||    
T  6196 tggaagagaaaacctaaagagagaaaattagggccg 6161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 16443 - 16489
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaaga 70  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||    
T  16443 tgtgaaaatcacttatttagattgaaatagagagaaacagatgaaga 16489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0608 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 153
Target Start/End: Complemental strand, 130 - 70
Alignment:
Q  93 ttgacccaaaaccacccttcaatgaagacactgtaagaaaaaacctagagagtgaaaacta 153  Q
    ||||||||||||||||| |||||| ||| ||||||||| |||| |||||||| ||||||||    
T  130 ttgacccaaaaccacccctcaatggagaaactgtaagagaaaagctagagagagaaaacta 70  T

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Target: scaffold0014 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 201492 - 201534
Alignment:
Q  24 tgtgaaaatcacttatttagattgaattagagagaaaaagatg 66  Q
    |||||||||||||||||||||||||| || |||||||||||||    
T  201492 tgtgaaaatcacttatttagattgaaatatagagaaaaagatg 201534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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