View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10140A_low_425 (Length: 227)

Name: NF10140A_low_425
Description: NF10140A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10140A_low_425
NF10140A_low_425
[»] scaffold0031 (1 HSPs)
scaffold0031 (11-210)||(46272-46472)
[»] chr8 (48 HSPs)
chr8 (11-210)||(15961130-15961330)
chr8 (11-210)||(18997698-18997898)
chr8 (11-210)||(30473915-30474115)
chr8 (11-210)||(44832217-44832417)
chr8 (11-210)||(6299051-6299251)
chr8 (11-210)||(10477935-10478135)
chr8 (11-210)||(32110892-32111092)
chr8 (11-210)||(995846-996046)
chr8 (11-210)||(18175379-18175579)
chr8 (11-210)||(39257441-39257641)
chr8 (11-210)||(40026798-40026998)
chr8 (11-210)||(11725188-11725388)
chr8 (11-211)||(28274244-28274445)
chr8 (24-210)||(35122353-35122540)
chr8 (16-209)||(18210656-18210850)
chr8 (17-210)||(28582859-28583053)
chr8 (11-210)||(18841902-18842102)
chr8 (11-192)||(19240661-19240843)
chr8 (11-192)||(19313845-19314027)
chr8 (11-204)||(44836907-44837101)
chr8 (11-202)||(19412829-19413022)
chr8 (11-210)||(18568863-18569063)
chr8 (11-210)||(24408874-24409074)
chr8 (11-211)||(11142459-11142666)
chr8 (11-189)||(24004779-24004958)
chr8 (48-210)||(39997726-39997889)
chr8 (11-130)||(23353688-23353808)
chr8 (11-209)||(25875322-25875530)
chr8 (11-73)||(18481929-18481991)
chr8 (11-59)||(39997660-39997708)
chr8 (16-59)||(6299290-6299333)
chr8 (16-59)||(10477853-10477896)
chr8 (16-59)||(11142381-11142424)
chr8 (16-59)||(11725106-11725149)
chr8 (16-59)||(18175297-18175340)
chr8 (16-59)||(18997616-18997659)
chr8 (16-59)||(19240580-19240623)
chr8 (16-59)||(19313764-19313807)
chr8 (16-59)||(19412752-19412795)
chr8 (16-59)||(23353846-23353889)
chr8 (16-59)||(24408795-24408838)
chr8 (16-59)||(30474153-30474196)
chr8 (16-59)||(32111131-32111174)
chr8 (16-59)||(35122585-35122628)
chr8 (16-59)||(39997580-39997623)
chr8 (16-59)||(44832457-44832500)
chr8 (16-59)||(44836824-44836867)
chr8 (17-59)||(18210893-18210935)
[»] chr7 (35 HSPs)
chr7 (11-210)||(21804603-21804803)
chr7 (11-210)||(38163370-38163570)
chr7 (11-210)||(42242185-42242385)
chr7 (16-210)||(3840672-3840867)
chr7 (11-210)||(27138559-27138759)
chr7 (11-210)||(33916978-33917178)
chr7 (11-210)||(31373454-31373654)
chr7 (11-210)||(17178268-17178469)
chr7 (11-210)||(21341821-21342021)
chr7 (11-210)||(21669979-21670179)
chr7 (11-210)||(24924077-24924277)
chr7 (11-210)||(16376576-16376776)
chr7 (11-210)||(21656626-21656826)
chr7 (11-210)||(43933575-43933775)
chr7 (11-209)||(15109697-15109896)
chr7 (11-210)||(40968889-40969089)
chr7 (11-210)||(13786168-13786368)
chr7 (11-202)||(27903456-27903648)
chr7 (11-209)||(21753524-21753723)
chr7 (48-202)||(39030291-39030446)
chr7 (11-61)||(31096698-31096748)
chr7 (16-59)||(15109930-15109973)
chr7 (16-59)||(3840912-3840955)
chr7 (16-59)||(16376812-16376855)
chr7 (16-59)||(17178508-17178551)
chr7 (16-59)||(21341737-21341780)
chr7 (16-59)||(21656547-21656590)
chr7 (16-59)||(21669895-21669938)
chr7 (16-59)||(21804842-21804885)
chr7 (16-59)||(27138798-27138841)
chr7 (16-59)||(31373370-31373413)
chr7 (16-59)||(33917217-33917260)
chr7 (16-59)||(42242424-42242467)
chr7 (16-57)||(43933815-43933856)
chr7 (19-59)||(24924001-24924041)
[»] chr6 (25 HSPs)
chr6 (11-210)||(12597296-12597496)
chr6 (11-210)||(19997663-19997863)
chr6 (11-210)||(33645940-33646140)
chr6 (11-210)||(28099628-28099828)
chr6 (11-210)||(2266766-2266974)
chr6 (11-210)||(10584759-10584959)
chr6 (11-210)||(17202430-17202630)
chr6 (17-210)||(13533771-13533965)
chr6 (11-210)||(2005426-2005626)
chr6 (16-210)||(15044725-15044920)
chr6 (11-210)||(3592891-3593091)
chr6 (11-174)||(17594814-17594979)
chr6 (11-137)||(8539598-8539725)
chr6 (11-137)||(25448747-25448874)
chr6 (116-210)||(1405594-1405688)
chr6 (102-204)||(33035523-33035625)
chr6 (16-59)||(2266684-2266727)
chr6 (16-59)||(10584996-10585039)
chr6 (16-59)||(12597535-12597578)
chr6 (16-59)||(15044639-15044682)
chr6 (16-59)||(17202348-17202391)
chr6 (16-59)||(17594733-17594776)
chr6 (16-59)||(19997580-19997623)
chr6 (16-59)||(28099868-28099911)
chr6 (16-59)||(33645858-33645901)
[»] chr5 (39 HSPs)
chr5 (11-210)||(10729473-10729673)
chr5 (11-210)||(20874686-20874886)
chr5 (11-210)||(34107369-34107569)
chr5 (11-210)||(34110650-34110850)
chr5 (11-210)||(38246896-38247096)
chr5 (11-204)||(17373201-17373395)
chr5 (11-210)||(16526337-16526537)
chr5 (11-204)||(33570344-33570538)
chr5 (11-210)||(2398973-2399171)
chr5 (11-194)||(14141154-14141338)
chr5 (11-202)||(27647928-27648120)
chr5 (11-210)||(1395987-1396187)
chr5 (11-210)||(5479194-5479394)
chr5 (11-210)||(20655080-20655280)
chr5 (11-204)||(29275622-29275816)
chr5 (11-199)||(6940545-6940734)
chr5 (11-210)||(33375760-33375962)
chr5 (11-210)||(24223195-24223395)
chr5 (11-186)||(1394541-1394717)
chr5 (11-210)||(25099267-25099467)
chr5 (11-210)||(25158357-25158557)
chr5 (16-178)||(17913744-17913907)
chr5 (91-210)||(40177120-40177239)
chr5 (16-59)||(1395907-1395950)
chr5 (16-59)||(2399210-2399253)
chr5 (16-59)||(5479115-5479158)
chr5 (16-59)||(6940768-6940811)
chr5 (16-59)||(10729712-10729755)
chr5 (16-59)||(14141377-14141420)
chr5 (16-59)||(16526577-16526620)
chr5 (16-59)||(17373434-17373477)
chr5 (16-59)||(20874604-20874647)
chr5 (16-59)||(24223434-24223477)
chr5 (16-59)||(27647845-27647888)
chr5 (16-59)||(33570578-33570621)
chr5 (16-59)||(34107608-34107651)
chr5 (16-59)||(34110566-34110609)
chr5 (16-59)||(38247135-38247178)
chr5 (16-59)||(40177033-40177076)
[»] chr4 (39 HSPs)
chr4 (11-210)||(16917919-16918119)
chr4 (11-210)||(52434622-52434822)
chr4 (11-210)||(30824953-30825153)
chr4 (11-210)||(53143293-53143493)
chr4 (11-210)||(12090490-12090691)
chr4 (11-210)||(37651664-37651864)
chr4 (11-210)||(31966000-31966200)
chr4 (17-210)||(16904983-16905177)
chr4 (11-210)||(46256032-46256232)
chr4 (11-210)||(33139502-33139702)
chr4 (11-210)||(44376110-44376310)
chr4 (11-210)||(45977021-45977221)
chr4 (17-210)||(35760585-35760779)
chr4 (11-192)||(45782478-45782660)
chr4 (11-210)||(31628518-31628718)
chr4 (11-210)||(41387124-41387324)
chr4 (11-210)||(37590835-37591035)
chr4 (11-210)||(48118565-48118762)
chr4 (11-210)||(52098221-52098422)
chr4 (11-210)||(39058388-39058588)
chr4 (11-210)||(47142831-47143031)
chr4 (16-179)||(50229768-50229933)
chr4 (11-204)||(54624955-54625142)
chr4 (147-201)||(50229712-50229766)
chr4 (16-59)||(12090730-12090773)
chr4 (16-59)||(16905218-16905261)
chr4 (16-59)||(16918158-16918201)
chr4 (16-59)||(30825192-30825235)
chr4 (16-59)||(31966239-31966282)
chr4 (87-134)||(34684603-34684650)
chr4 (16-59)||(39058622-39058665)
chr4 (16-59)||(45977264-45977307)
chr4 (16-59)||(47143070-47143113)
chr4 (16-59)||(48118802-48118845)
chr4 (16-59)||(52098460-52098503)
chr4 (16-59)||(52434540-52434583)
chr4 (16-59)||(53143534-53143577)
chr4 (16-59)||(54624879-54624922)
chr4 (16-56)||(50229979-50230019)
[»] chr3 (39 HSPs)
chr3 (11-210)||(3898420-3898620)
chr3 (11-210)||(12264198-12264398)
chr3 (11-210)||(38653958-38654158)
chr3 (11-210)||(43363642-43363842)
chr3 (11-210)||(49672560-49672760)
chr3 (11-204)||(54073025-54073219)
chr3 (11-210)||(1941751-1941951)
chr3 (11-210)||(21098302-21098502)
chr3 (11-210)||(34121353-34121553)
chr3 (11-210)||(49506380-49506580)
chr3 (11-210)||(4584465-4584665)
chr3 (11-210)||(20671247-20671447)
chr3 (11-210)||(26948796-26948996)
chr3 (11-210)||(36076485-36076685)
chr3 (11-204)||(31488409-31488603)
chr3 (11-210)||(39146438-39146638)
chr3 (11-202)||(45557923-45558115)
chr3 (11-199)||(24119205-24119394)
chr3 (11-204)||(49478206-49478400)
chr3 (11-210)||(55041614-55041820)
chr3 (58-210)||(40014684-40014837)
chr3 (87-209)||(26051334-26051457)
chr3 (11-84)||(26052236-26052309)
chr3 (139-210)||(6460199-6460269)
chr3 (16-59)||(1941990-1942033)
chr3 (16-59)||(3898338-3898381)
chr3 (16-59)||(12264115-12264158)
chr3 (16-59)||(20671166-20671209)
chr3 (16-59)||(21098219-21098262)
chr3 (16-59)||(26052349-26052392)
chr3 (16-59)||(26948689-26948732)
chr3 (16-59)||(31488329-31488372)
chr3 (16-59)||(34121271-34121314)
chr3 (16-59)||(38654198-38654241)
chr3 (16-59)||(43363881-43363924)
chr3 (16-59)||(49478124-49478167)
chr3 (16-59)||(49672478-49672521)
chr3 (16-59)||(55041858-55041901)
chr3 (16-57)||(36076723-36076764)
[»] chr2 (27 HSPs)
chr2 (11-210)||(41663235-41663435)
chr2 (11-210)||(41664508-41664708)
chr2 (11-210)||(6120550-6120750)
chr2 (11-210)||(18351549-18351749)
chr2 (11-210)||(44902080-44902279)
chr2 (16-210)||(20544828-20545023)
chr2 (11-210)||(19596394-19596594)
chr2 (11-210)||(31424007-31424207)
chr2 (11-210)||(42441958-42442162)
chr2 (11-210)||(8700259-8700459)
chr2 (11-210)||(36279485-36279685)
chr2 (11-204)||(26231296-26231490)
chr2 (16-203)||(34007747-34007935)
chr2 (11-210)||(42055197-42055395)
chr2 (11-210)||(999262-999462)
chr2 (26-200)||(16214837-16215012)
chr2 (81-210)||(27944827-27944956)
chr2 (87-210)||(692233-692356)
chr2 (16-59)||(19596634-19596677)
chr2 (16-59)||(6120467-6120510)
chr2 (16-59)||(16214741-16214784)
chr2 (16-59)||(18351467-18351510)
chr2 (16-59)||(26231527-26231570)
chr2 (16-59)||(31423924-31423967)
chr2 (16-59)||(34007980-34008023)
chr2 (16-59)||(41663152-41663195)
chr2 (16-59)||(42441876-42441919)
[»] chr1 (35 HSPs)
chr1 (11-210)||(4266379-4266579)
chr1 (11-210)||(34888717-34888917)
chr1 (11-210)||(38913778-38913978)
chr1 (11-210)||(50151058-50151258)
chr1 (11-210)||(2951397-2951597)
chr1 (30-210)||(1231813-1231994)
chr1 (11-199)||(7333942-7334131)
chr1 (11-210)||(9216029-9216229)
chr1 (11-210)||(23482738-23482938)
chr1 (11-210)||(35614065-35614265)
chr1 (11-201)||(39727978-39728169)
chr1 (11-210)||(18706540-18706739)
chr1 (11-210)||(38444629-38444829)
chr1 (24-202)||(35614827-35615005)
chr1 (16-210)||(52687145-52687339)
chr1 (81-210)||(50326070-50326199)
chr1 (11-210)||(18855264-18855463)
chr1 (86-210)||(31018231-31018355)
chr1 (24-198)||(19764593-19764768)
chr1 (11-150)||(19768462-19768602)
chr1 (11-146)||(2590333-2590468)
chr1 (124-204)||(5061335-5061415)
chr1 (147-210)||(29942153-29942216)
chr1 (16-59)||(1231725-1231768)
chr1 (16-59)||(2951636-2951679)
chr1 (16-59)||(4266297-4266340)
chr1 (16-59)||(18706773-18706816)
chr1 (16-59)||(19764814-19764857)
chr1 (16-59)||(19768382-19768425)
chr1 (16-59)||(23482972-23483015)
chr1 (16-59)||(35613984-35614027)
chr1 (16-59)||(35614734-35614777)
chr1 (16-59)||(38914017-38914060)
chr1 (16-59)||(52036310-52036353)
chr1 (16-56)||(7333863-7333903)
[»] scaffold0022 (2 HSPs)
scaffold0022 (11-202)||(149089-149281)
scaffold0022 (16-59)||(149318-149361)
[»] scaffold0173 (1 HSPs)
scaffold0173 (11-204)||(19345-19539)
[»] scaffold0836 (1 HSPs)
scaffold0836 (89-209)||(5310-5430)
[»] scaffold0515 (1 HSPs)
scaffold0515 (89-210)||(6092-6213)
[»] scaffold0306 (1 HSPs)
scaffold0306 (89-210)||(6102-6223)


Alignment Details
Target: scaffold0031 (Bit Score: 173; Significance: 4e-93; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 11 - 210
Target Start/End: Original strand, 46272 - 46472
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  46272 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 46371  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  46372 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 46471  T
Q  210 a 210  Q
    |    
T  46472 a 46472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 173; Significance: 4e-93; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 11 - 210
Target Start/End: Original strand, 15961130 - 15961330
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  15961130 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 15961229  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  15961230 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 15961329  T
Q  210 a 210  Q
    |    
T  15961330 a 15961330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 11 - 210
Target Start/End: Original strand, 18997698 - 18997898
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  18997698 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 18997797  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18997798 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 18997897  T
Q  210 a 210  Q
    |    
T  18997898 a 18997898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 30474115 - 30473915
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  30474115 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 30474016  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  30474015 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 30473916  T
Q  210 a 210  Q
    |    
T  30473915 a 30473915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 44832417 - 44832217
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  44832417 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 44832318  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  44832317 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 44832218  T
Q  210 a 210  Q
    |    
T  44832217 a 44832217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 6299251 - 6299051
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  6299251 ccaataatataatattgacatataattttaacaaaggaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 6299152  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  6299151 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 6299052  T
Q  210 a 210  Q
    |    
T  6299051 a 6299051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 11 - 210
Target Start/End: Original strand, 10477935 - 10478135
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  10477935 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 10478034  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  10478035 gttcgaattccaacatctgcatatatttgtgaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 10478134  T
Q  210 a 210  Q
    |    
T  10478135 a 10478135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 32111092 - 32110892
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  32111092 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 32110993  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  32110992 gttcgaattccaacatctgcatatatttggaaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 32110893  T
Q  210 a 210  Q
    |    
T  32110892 a 32110892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 996046 - 995846
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||    
T  996046 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaagttaatatttttttggtgaataagcgtggtgtctgag 995947  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  995946 gttcgaattccaacatatgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 995847  T
Q  210 a 210  Q
    |    
T  995846 a 995846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 11 - 210
Target Start/End: Original strand, 18175379 - 18175579
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgag 109  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||||| |||||||||||| ||||||||||||    
T  18175379 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgtttgataataattaatatttttttggtgaataagtgtggtgtctgag 18175478  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18175479 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 18175578  T
Q  210 a 210  Q
    |    
T  18175579 a 18175579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 11 - 210
Target Start/End: Original strand, 39257441 - 39257641
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  39257441 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 39257540  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  39257541 gttcaaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 39257640  T
Q  210 a 210  Q
    |    
T  39257641 a 39257641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 11 - 210
Target Start/End: Original strand, 40026798 - 40026998
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  40026798 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 40026897  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  40026898 gttcaaattccaacatctgcatatatttgggaccacatatttcattatctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 40026997  T
Q  210 a 210  Q
    |    
T  40026998 a 40026998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 11 - 210
Target Start/End: Original strand, 11725188 - 11725388
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  11725188 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 11725287  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  11725288 gttcgaattccaacatctgcatatatttgagaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 11725387  T
Q  210 a 210  Q
    |    
T  11725388 a 11725388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 11 - 211
Target Start/End: Complemental strand, 28274445 - 28274244
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| ||||||| ||||    
T  28274445 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtatgag 28274346  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||    
T  28274345 gttcgaattccaacatctgcgtatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctgctacatctacaatgtatatg 28274246  T
Q  210 at 211  Q
    ||    
T  28274245 at 28274244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 24 - 210
Target Start/End: Complemental strand, 35122540 - 35122353
Alignment:
Q  24 attgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttcaaattccaa 122  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||  |||||||||| |||||||||||| ||| ||||||||    
T  35122540 attgacatataattttaataaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgagattcgaattccaa 35122441  T
Q  123 catctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatga 210  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  35122440 catctgcatatattttggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatga 35122353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 16 - 209
Target Start/End: Complemental strand, 18210850 - 18210656
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 114  Q
    ||||||| |||||||||||| ||||||||||||| ||| |||||||||||||||||||| ||||||||||  |||||||||| |||||||||||||||||    
T  18210850 aatataacattgacatataactttaacaaaagaaggaaataacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttca 18210751  T
Q  115 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  18210750 aattccaacatctgcatatatttgagaccacatatttcattctctttgatatgcattgagatttatttttgtctactatatctacaatgtatatg 18210656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 17 - 210
Target Start/End: Original strand, 28582859 - 28583053
Alignment:
Q  17 atataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttcaa 115  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| |||||||||||||||| |    
T  28582859 atataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcga 28582958  T
Q  116 attccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatga 210  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||| |||||    
T  28582959 attccaacatctgcatatatttgagaccacatatttcattctctttgatatacattgagatttgtttttatctactacatctacaatgtatatga 28583053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 11 - 210
Target Start/End: Original strand, 18841902 - 18842102
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  18841902 ccaataatataacattgacatataattttaacaaaagaatgaagtaacatacaattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 18842001  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
     ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| ||||    
T  18842002 attcgaattccaacatctgcatatattttggaccacatatttcattctctttgatatgcattgagatttatttttgtctactacatctacaatgtatatg 18842101  T
Q  210 a 210  Q
    |    
T  18842102 a 18842102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 19240661 - 19240843
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatattttttg-gtgaataagcgtggtgtctgag 109  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||   ||||||||| ||||||||||||    
T  19240661 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacaccattgataaaaattaatatttttaacgtgaataagtgtggtgtctgag 19240760  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctacta 192  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19240761 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctacta 19240843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 19313845 - 19314027
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatattttttg-gtgaataagcgtggtgtctgag 109  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||   ||||||||| ||||||||||||    
T  19313845 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacaccattgataaaaattaatatttttaacgtgaataagtgtggtgtctgag 19313944  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctacta 192  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19313945 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctacta 19314027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 11 - 204
Target Start/End: Original strand, 44836907 - 44837101
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||| ||| ||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||  |||||||||||||||||||||||    
T  44836907 ccaataatttaacattgagatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatttttaaggtgaataagcgtggtgtctgag 44837006  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 204  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||| |||||||||||    
T  44837007 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgtattgagatttatttttgtctactacatctacaatgt 44837101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 11 - 202
Target Start/End: Original strand, 19412829 - 19413022
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaa-gaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctga 108  Q
    |||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||  |||||||||  |||||||||||    
T  19412829 ccaataatataacattgacatataattttaacaaaaagaatgaagtaacacacgatggataaaaattaatatttttaaggtgaataactgtggtgtctga 19412928  T
Q  109 ggttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaat 202  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  19412929 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaat 19413022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 11 - 210
Target Start/End: Original strand, 18568863 - 18569063
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatattttttgg-tgaataagcgtggtgtctgag 109  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  | |||||||| ||||||| ||||    
T  18568863 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaagatgaataagtgtggtgtttgag 18568962  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||| | ||||||||||| ||||    
T  18568963 gttcgaattccaacatctgcatatatttgggaccacatattttattctctttgatatgcattgagatatgtttttgtctacaacatctacaatgtatatg 18569062  T
Q  210 a 210  Q
    |    
T  18569063 a 18569063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 11 - 210
Target Start/End: Original strand, 24408874 - 24409074
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| ||||||| |||     
T  24408874 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtatgat 24408973  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||| ||||||| ||||||||||| ||||    
T  24408974 gttcgaattccaacatctgcatatatttgggaccacatatttcattatctttgatatgcattaagatttgtttttatctactacatctacaatgtatatg 24409073  T
Q  210 a 210  Q
    |    
T  24409074 a 24409074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 11 - 211
Target Start/End: Original strand, 11142459 - 11142666
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaa------taatatttttt-ggtgaataagcgtggtg 103  Q
    |||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||  |||||||||| ||||||    
T  11142459 ccaataatataacactgacatataattttaacaaaagaatgaagtaacacacgattgataaaaataaaaattaatatttttaaggtgaataagtgtggtg 11142558  T
Q  104 tctgaggttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatg 203  Q
    |||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  11142559 tctgaggttcgaattccaacatctgcatatatttgggagcacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatg 11142658  T
Q  204 tgtatgat 211  Q
    | ||||||    
T  11142659 tatatgat 11142666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 11 - 189
Target Start/End: Complemental strand, 24004958 - 24004779
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  24004958 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacatgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 24004859  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtcta 189  Q
    |||| |||| |||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||| |||||||||    
T  24004858 gttcgaatttcaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgattttgtcta 24004779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 48 - 210
Target Start/End: Original strand, 39997726 - 39997889
Alignment:
Q  48 aatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttcaaattccaacatctgcatatatttaggaccaca 146  Q
    ||||||||||||||||||||||||||| |||||||||   |||||||||| |||||||||||||||| ||||||||||||||||||||||| | ||||||    
T  39997726 aatgaagtaacacacgattgataaaaattaatattttaaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttggaaccaca 39997825  T
Q  147 tatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatga 210  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| |||||    
T  39997826 tatttcattctctttgatatacattgagatttgtttttgtctactacatctacaatgtatatga 39997889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 11 - 130
Target Start/End: Complemental strand, 23353808 - 23353688
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatattttt-tggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||  |||||||||| | ||||||||||    
T  23353808 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacaccattgataaaaattaatatttttaaggtgaataagtggggtgtctgag 23353709  T
Q  110 gttcaaattccaacatctgca 130  Q
    |||| ||||||||||||||||    
T  23353708 gttcgaattccaacatctgca 23353688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 209
Target Start/End: Complemental strand, 25875530 - 25875322
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatattttt-tggtgaataagcgt---------- 99  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  |||||||||| ||              
T  25875530 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgttttattctct 25875431  T
Q  100 ----ggtgtctgaggttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatat 195  Q
          |||||||||||| ||||||| ||||||||||      ||| ||||| ||| ||||||||| |||||||||||||||||||||||||||||||||    
T  25875430 ttaatatgtctgaggttcgaattccagcatctgcata-----gggagcacatgttttattctctttaatatgcattgagatttgtttttgtctactatat 25875336  T
Q  196 ctacaatgtgtatg 209  Q
    |||| |||| ||||    
T  25875335 ctacgatgtatatg 25875322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 73
Target Start/End: Complemental strand, 18481991 - 18481929
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaa 73  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  18481991 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaa 18481929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 39997660 - 39997708
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    |||| ||||||| |||||||||||||||| |||||||||||||||||||    
T  39997660 ccaataatataacattgacatataatttttacaaaagaatgaagtaaca 39997708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 6299333 - 6299290
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  6299333 aatataacattaacatataatttttacaaaagaatgaagtaaca 6299290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 10477853 - 10477896
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  10477853 aatataacattaacatataatttttacaaaagaatgaagtaaca 10477896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 11142381 - 11142424
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  11142381 aatataacattaacatataatttttacaaaagaatgaagtaaca 11142424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 11725106 - 11725149
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  11725106 aatataacattaacatataatttttacaaaagaatgaagtaaca 11725149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 18175297 - 18175340
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  18175297 aatataacattaacatataatttttacaaaagaatgaagtaaca 18175340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 18997616 - 18997659
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  18997616 aatataacattaacatataatttttacaaaagaatgaagtaaca 18997659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 19240580 - 19240623
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  19240580 aatataacattaacatataatttttacaaaagaatgaagtaaca 19240623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 19313764 - 19313807
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  19313764 aatataacattaacatataatttttacaaaagaatgaagtaaca 19313807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 19412752 - 19412795
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  19412752 aatataacattaacatataatttttacaaaagaatgaagtaaca 19412795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 23353889 - 23353846
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  23353889 aatataacattaacatataatttttacaaaagaatgaagtaaca 23353846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 24408795 - 24408838
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  24408795 aatataacattaacatataatttttacaaaagaatgaagtaaca 24408838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 30474196 - 30474153
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  30474196 aatataacattaacatataatttttacaaaagaatgaagtaaca 30474153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 32111174 - 32111131
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  32111174 aatataacattaacatataatttttacaaaagaatgaagtaaca 32111131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 35122628 - 35122585
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  35122628 aatataacattaacatataatttttacaaaagaatgaagtaaca 35122585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 39997580 - 39997623
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  39997580 aatataacattaacatataatttttacaaaagaatgaagtaaca 39997623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 44832500 - 44832457
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  44832500 aatataacattaacatataatttttacaaaagaatgaagtaaca 44832457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 44836824 - 44836867
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  44836824 aatataacattaacatataatttttacaaaagaatgaagtaaca 44836867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 59
Target Start/End: Complemental strand, 18210935 - 18210893
Alignment:
Q  17 atataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    |||||| ||| |||||||||||| |||||||||||||||||||    
T  18210935 atataacattaacatataatttttacaaaagaatgaagtaaca 18210893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 173; Significance: 4e-93; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 21804803 - 21804603
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  21804803 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 21804704  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  21804703 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 21804604  T
Q  210 a 210  Q
    |    
T  21804603 a 21804603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 38163570 - 38163370
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  38163570 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 38163471  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  38163470 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 38163371  T
Q  210 a 210  Q
    |    
T  38163370 a 38163370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 42242385 - 42242185
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  42242385 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 42242286  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  42242285 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 42242186  T
Q  210 a 210  Q
    |    
T  42242185 a 42242185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 16 - 210
Target Start/End: Complemental strand, 3840867 - 3840672
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||     
T  3840867 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 3840768  T
Q  115 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatga 210  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  3840767 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 3840672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 27138759 - 27138559
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  27138759 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 27138660  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  27138659 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctagaatgtatatg 27138560  T
Q  210 a 210  Q
    |    
T  27138559 a 27138559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 33917178 - 33916978
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  33917178 ccaataatataatattgacatataattttaacaaaagaatgaaataacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 33917079  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  33917078 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 33916979  T
Q  210 a 210  Q
    |    
T  33916978 a 33916978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 11 - 210
Target Start/End: Original strand, 31373454 - 31373654
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgag 109  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  31373454 ccaataatataatattgacatataattttaacaaaagaatgaagtaatacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 31373553  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  31373554 gttcgaatttcaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 31373653  T
Q  210 a 210  Q
    |    
T  31373654 a 31373654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 17178469 - 17178268
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt--ggtgaataagcgtggtgtctga 108  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||  |||||||||| |||||||||||    
T  17178469 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacccgattgataaaaattaatattttttttggtgaataagtgtggtgtctga 17178370  T
Q  109 ggttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtat 208  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||    
T  17178369 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgaattgagatttgtttttgtctactatatctacaatgtatat 17178270  T
Q  209 ga 210  Q
    ||    
T  17178269 ga 17178268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 11 - 210
Target Start/End: Original strand, 21341821 - 21342021
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  21341821 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 21341920  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| |||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||    
T  21341921 gttcgaattccaacatctgcatatatttgagactacatatttcattctctttgatatgcattgagatttatttttgtctattatatctacaatgtatatg 21342020  T
Q  210 a 210  Q
    |    
T  21342021 a 21342021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 11 - 210
Target Start/End: Original strand, 21669979 - 21670179
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  21669979 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 21670078  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  21670079 gttcgaattccaacatctgcatatatttgggaccacatattttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 21670178  T
Q  210 a 210  Q
    |    
T  21670179 a 21670179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 11 - 210
Target Start/End: Original strand, 24924077 - 24924277
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||  |||||||||| ||||||||||||    
T  24924077 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaatttaatatttttaaggtgaataagtgtggtgtctgag 24924176  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  24924177 gttcaaattccaacatctacatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 24924276  T
Q  210 a 210  Q
    |    
T  24924277 a 24924277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 16376776 - 16376576
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  16376776 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 16376677  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  16376676 gttcgaattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 16376577  T
Q  210 a 210  Q
    |    
T  16376576 a 16376576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 11 - 210
Target Start/End: Original strand, 21656626 - 21656826
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  21656626 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 21656725  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||| ||| ||||    
T  21656726 gttcgaattccaacatctgcatatatttgggaccacatattttattctctttgatatgcattgagatttgtttttgtctacttcatctacagtgtatatg 21656825  T
Q  210 a 210  Q
    |    
T  21656826 a 21656826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 43933775 - 43933575
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  43933775 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 43933676  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||| ||||||||||||| ||||||||||| ||||    
T  43933675 gttcgaattccaacatctgcatatatttgggaccacatattttattctcttttatatgcattgagatttttttttgtctactacatctacaatgtatatg 43933576  T
Q  210 a 210  Q
    |    
T  43933575 a 43933575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 11 - 209
Target Start/End: Complemental strand, 15109896 - 15109697
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatattttttgg-tgaataagcgtggtgtctgag 109  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||  | |||||||| ||||||||||||    
T  15109896 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatacttttaagatgaataagtgtggtgtctgag 15109797  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  15109796 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 15109697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 11 - 210
Target Start/End: Original strand, 40968889 - 40969089
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  40968889 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 40968988  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||    
T  40968989 gttcgaattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttgtgtctactacatctacaatgtatatg 40969088  T
Q  210 a 210  Q
    |    
T  40969089 a 40969089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 11 - 210
Target Start/End: Original strand, 13786168 - 13786368
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||| ||||||||||||||||||||||| |||||||||| || ||||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  13786168 ccaataatataacattgacatataattttaacaaaaaaatgaagtaagacgcgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 13786267  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  13786268 gttcgaattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 13786367  T
Q  210 a 210  Q
    |    
T  13786368 a 13786368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 11 - 202
Target Start/End: Complemental strand, 27903648 - 27903456
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||| ||||||||| |||||||||||||||||||||||| ||||||||| |||||| ||||||||||  |||||||||| ||||||| ||||    
T  27903648 ccaataatataacattgacatagaattttaacaaaagaatgaagtaagacacgattggtaaaaattaatatttttaaggtgaataagtgtggtgtatgag 27903549  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaat 202  Q
    |||| ||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  27903548 gttcgaattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaat 27903456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 11 - 209
Target Start/End: Complemental strand, 21753723 - 21753524
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  |||||||||| ||||||||| ||    
T  21753723 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctaag 21753624  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||  |||||||||||||||||  |||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  21753623 gttcgaattttaacatctgcatatatttgagaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 21753524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 48 - 202
Target Start/End: Complemental strand, 39030446 - 39030291
Alignment:
Q  48 aatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttcaaattccaacatctgcatatatttaggaccaca 146  Q
    |||||||||| |||||||||||||||| ||||||||||  |||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  39030446 aatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccaca 39030347  T
Q  147 tatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaat 202  Q
    | ||| ||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  39030346 tgttttattctctttgatatgcattgaaatttgtttttgtctactacatctacaat 39030291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 31096698 - 31096748
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacaca 61  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  31096698 ccaataatataatattgacatataattttaacaaaagaatgaagtaacaca 31096748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 15109973 - 15109930
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  15109973 aatataatattaacatataatttttacaaaagaatgaagtaaca 15109930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 3840955 - 3840912
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  3840955 aatataacattaacatataatttttacaaaagaatgaagtaaca 3840912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 16376855 - 16376812
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| |||||||||||||||| |||||| ||||||||||||    
T  16376855 aatataacattgacatataatttttacaaaataatgaagtaaca 16376812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 17178551 - 17178508
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  17178551 aatataacattaacatataatttttacaaaagaatgaagtaaca 17178508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 21341737 - 21341780
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  21341737 aatataacattaacatataatttttacaaaagaatgaagtaaca 21341780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 21656547 - 21656590
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  21656547 aatataacattaacatataatttttacaaaagaatgaagtaaca 21656590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 21669895 - 21669938
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  21669895 aatataacattaacatataatttttacaaaagaatgaagtaaca 21669938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 21804885 - 21804842
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  21804885 aatataacattaacatataatttttacaaaagaatgaagtaaca 21804842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 27138841 - 27138798
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  27138841 aatataacattaacatataatttttacaaaagaatgaagtaaca 27138798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 31373370 - 31373413
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  31373370 aatataacattaacatataatttttacaaaagaatgaagtaaca 31373413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 33917260 - 33917217
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  33917260 aatataacattaacatataatttttacaaaagaatgaagtaaca 33917217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 42242467 - 42242424
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  42242467 aatataacattaacatataatttttacaaaagaatgaagtaaca 42242424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 43933856 - 43933815
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaa 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||    
T  43933856 aatataacattaacatataatttttacaaaagaatgaagtaa 43933815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 24924001 - 24924041
Alignment:
Q  19 ataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    |||| ||| |||||||||||| |||||||||||||||||||    
T  24924001 ataacattaacatataatttttacaaaagaatgaagtaaca 24924041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 173; Significance: 4e-93; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 12597496 - 12597296
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  12597496 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 12597397  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  12597396 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 12597297  T
Q  210 a 210  Q
    |    
T  12597296 a 12597296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 11 - 210
Target Start/End: Original strand, 19997663 - 19997863
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  19997663 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 19997762  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  19997763 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 19997862  T
Q  210 a 210  Q
    |    
T  19997863 a 19997863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 11 - 210
Target Start/End: Original strand, 33645940 - 33646140
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  33645940 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 33646039  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  33646040 gttcgaattccaacatctgcatatatttggaaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 33646139  T
Q  210 a 210  Q
    |    
T  33646140 a 33646140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 28099828 - 28099628
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  28099828 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 28099729  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  28099728 gttcgaattccaacatcagcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 28099629  T
Q  210 a 210  Q
    |    
T  28099628 a 28099628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 11 - 210
Target Start/End: Original strand, 2266766 - 2266974
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtg--------g 101  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||        |    
T  2266766 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtcgtgg 2266865  T
Q  102 tgtctgaggttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaa 201  Q
    |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2266866 tgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaa 2266965  T
Q  202 tgtgtatga 210  Q
    ||| |||||    
T  2266966 tgtatatga 2266974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 10584959 - 10584759
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| || |||||||||    
T  10584959 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtagtgtctgag 10584860  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||    
T  10584859 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattaagatttgtttttgtctactacatctacaatgtatatg 10584760  T
Q  210 a 210  Q
    |    
T  10584759 a 10584759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 11 - 210
Target Start/End: Original strand, 17202430 - 17202630
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  17202430 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 17202529  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||| ||||    
T  17202530 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgtgatttgtatttgtctactacatctacaatgtatatg 17202629  T
Q  210 a 210  Q
    |    
T  17202630 a 17202630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 17 - 210
Target Start/End: Original strand, 13533771 - 13533965
Alignment:
Q  17 atataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttcaa 115  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| |||||||||||||||| |    
T  13533771 atataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcga 13533870  T
Q  116 attccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatga 210  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||| |||||    
T  13533871 attccaacatctgcatatatttgggaccacatatttcattctctttgatatacattgagatttgtttttatctactacatctacaatgtatatga 13533965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 11 - 210
Target Start/End: Original strand, 2005426 - 2005626
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  2005426 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 2005525  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| |||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||    
T  2005526 gttcgaattccaacatctgcatatatttaagaccacatgttttattctctttgatatgcattgagatttgtttttgtctactgcatctacaatgtatatg 2005625  T
Q  210 a 210  Q
    |    
T  2005626 a 2005626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 16 - 210
Target Start/End: Original strand, 15044725 - 15044920
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 114  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  |||||||||| ||||||||||||||||     
T  15044725 aatataacattgacatataattttaacaaaagaatgaagtaaaacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 15044824  T
Q  115 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatga 210  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||| ||||||||||||| ||||||||||| |||||    
T  15044825 aattccaacatctgcatatatttgggaccacatattttattctctttgatatgcattgaaatttatttttgtctactacatctacaatgtatatga 15044920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 11 - 210
Target Start/End: Original strand, 3592891 - 3593091
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||  |||||||||| ||||||||||||    
T  3592891 ccaataatataacattgagatataattttaacaaaagaatgaagtaacacacgattcataaaaattaatatttttaaggtgaataagtgtggtgtctgag 3592990  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| |||||||||||||| |||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  3592991 gttcgaattccaacatctgaatatatttgggatcacatatttcattctcttggatatgcattgagatttgtttttgtctactacatctacaatgtatatg 3593090  T
Q  210 a 210  Q
    |    
T  3593091 a 3593091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 11 - 174
Target Start/End: Original strand, 17594814 - 17594979
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaat-aatatttttt-ggtgaataagcgtggtgtctga 108  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| | |||||||||  |||||||||| |||||||||||    
T  17594814 ccaataatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaatttaatatttttaaggtgaataagtgtggtgtctga 17594913  T
Q  109 ggttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgag 174  Q
     |||  |||| |||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||    
T  17594914 agtttgaatttcaacatctccatatatttgggaccacatatttcattttctttgatatgcattgag 17594979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 11 - 137
Target Start/End: Original strand, 8539598 - 8539725
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatattttt-tggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  8539598 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 8539697  T
Q  110 gttcaaattccaacatctgcatatattt 137  Q
    |||| |||||||||||||||||||||||    
T  8539698 gttcgaattccaacatctgcatatattt 8539725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 11 - 137
Target Start/End: Original strand, 25448747 - 25448874
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatat-tttttggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  25448747 ccaataatataatattgacatataattttaacaaaaaaatgaagtaacacacgattgataaaaattaatatatttttggtgaataagcgtggtgtctgag 25448846  T
Q  110 gttcaaattccaacatctgcatatattt 137  Q
     ||| ||||||||||||| |||||||||    
T  25448847 tttcgaattccaacatctacatatattt 25448874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 116 - 210
Target Start/End: Complemental strand, 1405688 - 1405594
Alignment:
Q  116 attccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatga 210  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||| |||| ||||||||||||||||| ||||||| ||||||||||| |||||    
T  1405688 attccaacatctgcatatatttgggatcacatatttcattctctttaatatacattgagatttgtttttatctactacatctacaatgtatatga 1405594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 33035523 - 33035625
Alignment:
Q  102 tgtctgaggttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaa 201  Q
    |||||||| ||| ||||||| |||||||||||||||  |||||||| ||| ||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  33035523 tgtctgagattcgaattccagcatctgcatatatttgagaccacatgttttattctctttgacatgcattgagatttgtttttgtctactacatctacaa 33035622  T
Q  202 tgt 204  Q
    |||    
T  33035623 tgt 33035625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 2266684 - 2266727
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  2266684 aatataacattaacatataatttttacaaaagaatgaagtaaca 2266727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 10585039 - 10584996
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  10585039 aatataacattaacatataatttttacaaaagaatgaagtaaca 10584996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 12597578 - 12597535
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  12597578 aatataacattaacatataatttttacaaaagaatgaagtaaca 12597535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 15044639 - 15044682
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  15044639 aatataacattaacatataatttttacaaaagaatgaagtaaca 15044682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 17202348 - 17202391
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  17202348 aatataacattaacatataatttttacaaaagaatgaagtaaca 17202391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 17594733 - 17594776
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  17594733 aatataacattaacatataatttttacaaaagaatgaagtaaca 17594776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 19997580 - 19997623
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  19997580 aatataacattaacatataatttttacaaaagaatgaagtaaca 19997623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 28099911 - 28099868
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  28099911 aatataacattaacatataatttttacaaaagaatgaagtaaca 28099868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 33645858 - 33645901
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  33645858 aatataacattaacatataatttttacaaaagaatgaagtaaca 33645901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 173; Significance: 4e-93; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 10729673 - 10729473
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  10729673 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttttggtgaataagcgtggtgtctgag 10729574  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  10729573 gttcgaattccaacatctgcatatatttgggaccacatatttcattctcttggatatgcattgagatttgtttttgtctactatatctacaatgtatatg 10729474  T
Q  210 a 210  Q
    |    
T  10729473 a 10729473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 11 - 210
Target Start/End: Original strand, 20874686 - 20874886
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  20874686 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 20874785  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  20874786 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 20874885  T
Q  210 a 210  Q
    |    
T  20874886 a 20874886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 34107569 - 34107369
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  34107569 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 34107470  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  34107469 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 34107370  T
Q  210 a 210  Q
    |    
T  34107369 a 34107369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 11 - 210
Target Start/End: Original strand, 34110650 - 34110850
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  34110650 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 34110749  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  34110750 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 34110849  T
Q  210 a 210  Q
    |    
T  34110850 a 34110850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 38247096 - 38246896
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  38247096 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 38246997  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  38246996 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 38246897  T
Q  210 a 210  Q
    |    
T  38246896 a 38246896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 11 - 204
Target Start/End: Complemental strand, 17373395 - 17373201
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  17373395 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 17373296  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 204  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17373295 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 17373201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 16526537 - 16526337
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  16526537 ccaataatataatattgacatataattttaacaaaagaacgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 16526438  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  16526437 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 16526338  T
Q  210 a 210  Q
    |    
T  16526337 a 16526337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 11 - 204
Target Start/End: Complemental strand, 33570538 - 33570344
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  33570538 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 33570439  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 204  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  33570438 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttggtatgcattgagatttgtttttgtctactatatctacaatgt 33570344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 2399171 - 2398973
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||| |||||||||||||||||||||||    
T  2399171 ccaataatataatattgacatataattttaacaaaagaatgaagtaacac--gattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 2399074  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  2399073 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 2398974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 11 - 194
Target Start/End: Complemental strand, 14141338 - 14141154
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  14141338 ccaataatataatattggcatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 14141239  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactata 194  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14141238 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactata 14141154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 11 - 202
Target Start/End: Original strand, 27647928 - 27648120
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  27647928 ccaacaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 27648027  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaat 202  Q
    |||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  27648028 gttcgaattccaacatctgtatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaat 27648120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 11 - 210
Target Start/End: Original strand, 1395987 - 1396187
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||  |||||||||| ||||||||||||    
T  1395987 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgactgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 1396086  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||| ||||    
T  1396087 gttcgaattccaacatctgcagatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctgctacatctgcaatgtatatg 1396186  T
Q  210 a 210  Q
    |    
T  1396187 a 1396187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 11 - 210
Target Start/End: Original strand, 5479194 - 5479394
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| || |||||||||    
T  5479194 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtagtgtctgag 5479293  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| ||||    
T  5479294 gttcgaattccaacatctacatatatttgggatcacatatttcattctctttgatatgcattgagatttatttttgtctactacatctacaatgtatatg 5479393  T
Q  210 a 210  Q
    |    
T  5479394 a 5479394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 20655280 - 20655080
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  20655280 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacaattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 20655181  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  20655180 gttcgaattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 20655081  T
Q  210 a 210  Q
    |    
T  20655080 a 20655080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 11 - 204
Target Start/End: Original strand, 29275622 - 29275816
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||  |||||||||| ||||||||||||    
T  29275622 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaagttaatatttttaaggtgaataagtgtggtgtctgag 29275721  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 204  Q
    |||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||| || |||||||||||    
T  29275722 gttcgaattccaacatctgcatatatttgggaccacatgtttcattctctttgatatgcattgaaatttgtttttgtctattacatctacaatgt 29275816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 11 - 199
Target Start/End: Complemental strand, 6940734 - 6940545
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| |||||||  ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  |||||||||| ||||||| ||||    
T  6940734 ccaataatataacgttgacatataattttaacaaaagaatgaagtaacatacgattgataaaaattaatatttttcaggtgaataagtgtggtgtatgag 6940635  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctac 199  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  6940634 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctac 6940545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 11 - 210
Target Start/End: Original strand, 33375760 - 33375962
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatattttt-tggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  33375760 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 33375859  T
Q  110 gttcaaattccaacatctgcatatatttagg--accacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgta 207  Q
    |||| ||||||||||||||||||||||| ||  ||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||    
T  33375860 gttcgaattccaacatctgcatatatttgggacaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtata 33375959  T
Q  208 tga 210  Q
    |||    
T  33375960 tga 33375962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 24223395 - 24223195
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||| | ||||||||||| |||||||||||||||||||||||||||||||| |||| | ||||||||||  |||||||||| ||||||||||||    
T  24223395 ccaataatatcacattgacatatacttttaacaaaagaatgaagtaacacacgattggtaaagagtaatatttttaaggtgaataagtgtggtgtctgag 24223296  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| |||| ||||    
T  24223295 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttcatatgcattgagatttgtttttgtctactacatctacgatgtatatg 24223196  T
Q  210 a 210  Q
    |    
T  24223195 a 24223195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 11 - 186
Target Start/End: Complemental strand, 1394717 - 1394541
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||  |||||| ||| ||||||| ||||    
T  1394717 ccaataatataacattgacatataaatttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaacaagtgtggtgtttgag 1394618  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgt 186  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  1394617 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt 1394541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 25099467 - 25099267
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  || ||||||| |||||| |||||    
T  25099467 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggcgaataagtgtggtgcctgag 25099368  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| |||||||||||||||||||||||  |||||||| ||| ||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||    
T  25099367 gttcgaattccaacatctgcatatatttgtgaccacatgttttattctctttgatatgcattcagatttgtttttgtctactacatctacaatgtatatg 25099268  T
Q  210 a 210  Q
    |    
T  25099267 a 25099267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 25158557 - 25158357
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  || ||||||| |||||| |||||    
T  25158557 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggcgaataagtgtggtgcctgag 25158458  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| |||||||||||||||||||||||  |||||||| ||| ||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||    
T  25158457 gttcgaattccaacatctgcatatatttgtgaccacatgttttattctctttgatatgcattcagatttgtttttgtctactacatctacaatgtatatg 25158358  T
Q  210 a 210  Q
    |    
T  25158357 a 25158357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 16 - 178
Target Start/End: Original strand, 17913744 - 17913907
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 114  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| | ||||||||||  |||||||||| ||||| | ||||||||     
T  17913744 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaagattaatatttttaaggtgaataagtgtggtatttgaggttcg 17913843  T
Q  115 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagattt 178  Q
    ||||||||||||| ||||||||| ||||||||| ||| ||||||||||||||||||||||||||    
T  17913844 aattccaacatctacatatatttgggaccacatgttttattctctttgatatgcattgagattt 17913907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 91 - 210
Target Start/End: Original strand, 40177120 - 40177239
Alignment:
Q  91 aataagcgtggtgtctgaggttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctac 190  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  40177120 aataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctcttttatatgcattgagatttgtttttgtctac 40177219  T
Q  191 tatatctacaatgtgtatga 210  Q
    |||||||||||||| |||||    
T  40177220 tatatctacaatgtatatga 40177239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 1395907 - 1395950
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  1395907 aatataacattaacatataatttttacaaaagaatgaagtaaca 1395950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 2399253 - 2399210
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  2399253 aatataacattaacatataatttttacaaaagaatgaagtaaca 2399210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 5479115 - 5479158
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  5479115 aatataacattaacatataatttttacaaaagaatgaagtaaca 5479158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 6940811 - 6940768
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  6940811 aatataacattaacatataatttttacaaaagaatgaagtaaca 6940768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 10729755 - 10729712
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  10729755 aatataacattaacatataatttttacaaaagaatgaagtaaca 10729712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 14141420 - 14141377
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  14141420 aatataacattaacatataatttttacaaaagaatgaagtaaca 14141377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 16526620 - 16526577
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  16526620 aatataacattaacatataatttttacaaaagaatgaagtaaca 16526577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 17373477 - 17373434
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  17373477 aatataacattaacatataatttttacaaaagaatgaagtaaca 17373434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 20874604 - 20874647
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  20874604 aatataacattaacatataatttttacaaaagaatgaagtaaca 20874647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 24223477 - 24223434
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  24223477 aatataacattaacatataatttttacaaaagaatgaagtaaca 24223434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 27647845 - 27647888
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  27647845 aatataacattaacatataatttttacaaaagaatgaagtaaca 27647888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 33570621 - 33570578
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  33570621 aatataacattaacatataatttttacaaaagaatgaagtaaca 33570578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 34107651 - 34107608
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  34107651 aatataacattaacatataatttttacaaaagaatgaagtaaca 34107608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 34110566 - 34110609
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  34110566 aatataacattaacatataatttttacaaaagaatgaagtaaca 34110609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 38247178 - 38247135
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  38247178 aatataacattaacatataatttttacaaaagaatgaagtaaca 38247135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 40177033 - 40177076
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  40177033 aatataacattaacatataatttttacaaaagaatgaagtaaca 40177076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 173; Significance: 4e-93; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 16918119 - 16917919
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  16918119 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 16918020  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  16918019 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 16917920  T
Q  210 a 210  Q
    |    
T  16917919 a 16917919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 11 - 210
Target Start/End: Original strand, 52434622 - 52434822
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  52434622 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 52434721  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  52434722 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 52434821  T
Q  210 a 210  Q
    |    
T  52434822 a 52434822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 30825153 - 30824953
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  30825153 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 30825054  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  30825053 gttcgaattccaacatctgcatatatttggaaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 30824954  T
Q  210 a 210  Q
    |    
T  30824953 a 30824953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 53143493 - 53143293
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  53143493 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 53143394  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  53143393 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 53143294  T
Q  210 a 210  Q
    |    
T  53143293 a 53143293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 12090691 - 12090490
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaaataatattttttggt-gaataagcgtggtgtctga 108  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  12090691 ccaataatataatattgacatataattttaacaaaagaaatgaagtaacacacgattgataaaaattaatattttttggttgaataagcgtggtgtctga 12090592  T
Q  109 ggttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtat 208  Q
    ||||| ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  12090591 ggttcgaattccaacatctacatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatat 12090492  T
Q  209 ga 210  Q
    ||    
T  12090491 ga 12090490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 11 - 210
Target Start/End: Original strand, 37651664 - 37651864
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||    
T  37651664 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtttgag 37651763  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| |||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  37651764 gttcgaattccaacatctgcatatatttgagaccacatatttcattctctttcatatgcattgagatttgtttttgtctactatatctacaatgtatatg 37651863  T
Q  210 a 210  Q
    |    
T  37651864 a 37651864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 31966200 - 31966000
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  31966200 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 31966101  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| ||| || || ||||||||||| ||||    
T  31966100 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttatttatgtataataaatctacaatgtatatg 31966001  T
Q  210 a 210  Q
    |    
T  31966000 a 31966000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 17 - 210
Target Start/End: Complemental strand, 16905177 - 16904983
Alignment:
Q  17 atataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttcaa 115  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||  |||||||||| |||||||||||||||| |    
T  16905177 atataacattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcga 16905078  T
Q  116 attccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatga 210  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  16905077 attccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatga 16904983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 11 - 210
Target Start/End: Original strand, 46256032 - 46256232
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  46256032 ccaataatataacattgacatataattttaacaaaagaatgaagtaagatacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 46256131  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  46256132 gttccaattccaacatctgcatatatttgggaccacatattttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 46256231  T
Q  210 a 210  Q
    |    
T  46256232 a 46256232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 33139702 - 33139502
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  |||||||||  ||||||||||||    
T  33139702 ccaataatataacattgacatataattttaacaaaagaatgaagtaatacacgattgataaaaattaatatttttaaggtgaataaatgtggtgtctgag 33139603  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  33139602 gttcgaattccaacatctgcatatatttgggacaacatatttaattctctttgatatgcattgagatttgtttttgtctactaaatctacaatgtatatg 33139503  T
Q  210 a 210  Q
    |    
T  33139502 a 33139502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 44376310 - 44376110
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  44376310 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 44376211  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| |||||||||||||||||||||||  |||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  44376210 gttcgaattccaacatctgcatatatttgtgaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 44376111  T
Q  210 a 210  Q
    |    
T  44376110 a 44376110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 45977221 - 45977021
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  45977221 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 45977122  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| |||||| |||| ||||    
T  45977121 gttcgaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgatatttatttttatctactacatctacgatgtatatg 45977022  T
Q  210 a 210  Q
    |    
T  45977021 a 45977021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 17 - 210
Target Start/End: Original strand, 35760585 - 35760779
Alignment:
Q  17 atataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttcaa 115  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||  ||||||| |||||||| |    
T  35760585 atataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataattgtggtgtttgaggttcga 35760684  T
Q  116 attccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatga 210  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||| |||||    
T  35760685 attccaacatctgcatatatttgggaccacatatttcattctctttgatatacattgagatttatttttatctactatatctacaatgtatatga 35760779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 11 - 192
Target Start/End: Complemental strand, 45782660 - 45782478
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  45782660 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 45782561  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctacta 192  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||||||||    
T  45782560 gttcaaattccaacatcttcatatatttaggaccacatatttcattctctttgatatatattgagatttatttttgtctacta 45782478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 31628718 - 31628518
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatattttttgg-tgaataagcgtggtgtctgag 109  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||| ||||||| ||||    
T  31628718 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttaagatgaataagtgtggtgtatgag 31628619  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| |||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||| ||||||||||||| | ||||||||||| ||||    
T  31628618 gttcgaattccaacatctgcatatatttgagaccacatatttaattctctttgatatgcattgagatatgtttttgtctacaacatctacaatgtatatg 31628519  T
Q  210 a 210  Q
    |    
T  31628518 a 31628518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 11 - 210
Target Start/End: Original strand, 41387124 - 41387324
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||  |||||||||| ||||||||||||    
T  41387124 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgatcgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 41387223  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| |||| || ||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  41387224 gttcgaatttcagcatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 41387323  T
Q  210 a 210  Q
    |    
T  41387324 a 41387324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 37591035 - 37590835
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  37591035 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacatgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 37590936  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| |||| |||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||    
T  37590935 gttcgaatttcaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgattttgtctactacatctacaatgtatatg 37590836  T
Q  210 a 210  Q
    |    
T  37590835 a 37590835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 48118762 - 48118565
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||  |||||||| | ||||||| ||||    
T  48118762 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattggtaaaaattaatatttttaaggtgaatacgtgtggtgtttgag 48118663  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||   ||||||||||| ||||    
T  48118662 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttatttttgtctac---atctacaatgtatatg 48118566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 52098422 - 52098221
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaat-aatatttttt-ggtgaataagcgtggtgtctga 108  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||  |||||||||| || ||||||||    
T  52098422 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaatttaatatttttaaggtgaataagtgttgtgtctga 52098323  T
Q  109 ggttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtat 208  Q
     |||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| ||| |||    
T  52098322 agtttgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttatttttgtctactatatttacagtgtatat 52098223  T
Q  209 ga 210  Q
    ||    
T  52098222 ga 52098221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 39058588 - 39058388
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||  |||||||||| ||||| ||||||    
T  39058588 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacatgattgataaaaattaatatttttaaggtgaataagtgtggtatctgag 39058489  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| |||||||||||||  |||||||| ||||||||||||||||||||||||||||  ||| | |||||||||||||||||||||||||||||| ||||    
T  39058488 gttcgaattccaacatcttgatatatttgggaccacatatttcattctctttgatatatattaaaatttgtttttgtctactatatctacaatgtatatg 39058389  T
Q  210 a 210  Q
    |    
T  39058388 a 39058388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 47143031 - 47142831
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||| ||| ||||| ||||||||||||||||||||||||||||||||| || |||||||| ||||||||||  ||||||||||| |||||||||||    
T  47143031 ccaataatttaacattgagatataattttaacaaaagaatgaagtaacacacaatcgataaaaattaatatttttaaggtgaataagcatggtgtctgag 47142932  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||| |||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  47142931 gttcgaattctaacatctgcatatatttgagaccacatatgtcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 47142832  T
Q  210 a 210  Q
    |    
T  47142831 a 47142831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 16 - 179
Target Start/End: Complemental strand, 50229933 - 50229768
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaat-aatatttttt-ggtgaataagcgtggtgtctgaggttc 113  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||  ||||||||||  |||||||||||||||    
T  50229933 aatataacattgacatataattttaacaaaagaatgaagtaacacactattgataaaaaattaatatttttaaggtgaataagtatggtgtctgaggttc 50229834  T
Q  114 aaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttg 179  Q
     ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  50229833 gaattccaacatctgcatatattttggaccacatgtttcattctctttgatatgcattgagatttg 50229768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 11 - 204
Target Start/End: Original strand, 54624955 - 54625142
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||| |||||||||||||||||||||| |||||||||||||      ||||||||| ||||||||||  |||||||||| ||||||||||||    
T  54624955 ccaataatataacattgacatataattttaacaaa-gaatgaagtaaca------tgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 54625047  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 204  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||    
T  54625048 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattaagatttgtttttgtctactacgtctacaatgt 54625142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 147 - 201
Target Start/End: Complemental strand, 50229766 - 50229712
Alignment:
Q  147 tatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaa 201  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  50229766 tatttcattctctttgatatgcattgagatttttttttgtctactacatctacaa 50229712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 12090773 - 12090730
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  12090773 aatataacattaacatataatttttacaaaagaatgaagtaaca 12090730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 16905261 - 16905218
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  16905261 aatataacattaacatataatttttacaaaagaatgaagtaaca 16905218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 16918201 - 16918158
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  16918201 aatataacattaacatataatttttacaaaagaatgaagtaaca 16918158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 30825235 - 30825192
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  30825235 aatataacattaacatataatttttacaaaagaatgaagtaaca 30825192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 31966282 - 31966239
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  31966282 aatataacattaacatataatttttacaaaagaatgaagtaaca 31966239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 134
Target Start/End: Complemental strand, 34684650 - 34684603
Alignment:
Q  87 ggtgaataagcgtggtgtctgaggttcaaattccaacatctgcatata 134  Q
    |||||||||| | |||||||||||||| ||||||||| ||||||||||    
T  34684650 ggtgaataagtggggtgtctgaggttcgaattccaacctctgcatata 34684603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 39058665 - 39058622
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  39058665 aatataacattaacatataatttttacaaaagaatgaagtaaca 39058622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 45977307 - 45977264
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  45977307 aatataacattaacatataatttttacaaaagaatgaagtaaca 45977264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 47143113 - 47143070
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  47143113 aatataacattaacatataatttttacaaaagaatgaagtaaca 47143070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 48118845 - 48118802
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  48118845 aatataacattaacatataatttttacaaaagaatgaagtaaca 48118802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 52098503 - 52098460
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  52098503 aatataacattaacatataatttttacaaaagaatgaagtaaca 52098460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 52434540 - 52434583
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  52434540 aatataacattaacatataatttttacaaaagaatgaagtaaca 52434583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 53143577 - 53143534
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  53143577 aatataacattaacatataatttttacaaaagaatgaagtaaca 53143534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 54624879 - 54624922
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  54624879 aatataacattaacatataatttttacaaaagaatgaagtaaca 54624922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 50230019 - 50229979
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagta 56  Q
    ||||||| ||| |||||||||||| ||||||||||||||||    
T  50230019 aatataacattaacatataatttttacaaaagaatgaagta 50229979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 173; Significance: 4e-93; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 11 - 210
Target Start/End: Original strand, 3898420 - 3898620
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  3898420 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 3898519  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  3898520 gttcaaattccaacatctgcatatatttgggaccacatatttcattctctttaatatgcattgagatttgtttttgtctactatatctacaatgtatatg 3898619  T
Q  210 a 210  Q
    |    
T  3898620 a 3898620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 11 - 210
Target Start/End: Original strand, 12264198 - 12264398
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  12264198 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 12264297  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  12264298 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 12264397  T
Q  210 a 210  Q
    |    
T  12264398 a 12264398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 38654158 - 38653958
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  38654158 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 38654059  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  38654058 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 38653959  T
Q  210 a 210  Q
    |    
T  38653958 a 38653958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 43363842 - 43363642
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  43363842 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 43363743  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  43363742 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 43363643  T
Q  210 a 210  Q
    |    
T  43363642 a 43363642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 11 - 210
Target Start/End: Original strand, 49672560 - 49672760
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  49672560 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 49672659  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  49672660 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 49672759  T
Q  210 a 210  Q
    |    
T  49672760 a 49672760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 11 - 204
Target Start/End: Original strand, 54073025 - 54073219
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  54073025 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 54073124  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 204  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54073125 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 54073219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 1941951 - 1941751
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||    
T  1941951 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtgatgtctgag 1941852  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  1941851 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 1941752  T
Q  210 a 210  Q
    |    
T  1941751 a 1941751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 11 - 210
Target Start/End: Original strand, 21098302 - 21098502
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  21098302 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 21098401  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  21098402 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 21098501  T
Q  210 a 210  Q
    |    
T  21098502 a 21098502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 11 - 210
Target Start/End: Original strand, 34121353 - 34121553
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  34121353 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 34121452  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  34121453 gttcgaattccaacatctgcatatatttgggaccacgtatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 34121552  T
Q  210 a 210  Q
    |    
T  34121553 a 34121553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 49506580 - 49506380
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  49506580 ccaataatataatattgacatataattttaacaaaagaatgaagtaccacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 49506481  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  49506480 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 49506381  T
Q  210 a 210  Q
    |    
T  49506380 a 49506380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 4584665 - 4584465
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  4584665 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 4584566  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  4584565 gttcaaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 4584466  T
Q  210 a 210  Q
    |    
T  4584465 a 4584465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 11 - 210
Target Start/End: Original strand, 20671247 - 20671447
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  20671247 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 20671346  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  20671347 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 20671446  T
Q  210 a 210  Q
    |    
T  20671447 a 20671447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 11 - 210
Target Start/End: Original strand, 26948796 - 26948996
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||  |||||||||| ||||||||||||    
T  26948796 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaagttaatatttttaaggtgaataagtgtggtgtctgag 26948895  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  26948896 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 26948995  T
Q  210 a 210  Q
    |    
T  26948996 a 26948996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 36076685 - 36076485
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| |||||||||||     
T  36076685 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaa 36076586  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||    
T  36076585 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttaatatgcattgagatttgtttttgtctactacatctacaatgtatatg 36076486  T
Q  210 a 210  Q
    |    
T  36076485 a 36076485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 11 - 204
Target Start/End: Original strand, 31488409 - 31488603
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  31488409 ccaataatataacattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 31488508  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 204  Q
    |||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  31488509 gttcgaattccaacatctgcatatatttgggacaacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgt 31488603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 11 - 210
Target Start/End: Original strand, 39146438 - 39146638
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  39146438 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 39146537  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||| ||||    
T  39146538 gttcgaattccaacatctgcatatatttgggaccacatattttattctctttgatatgcattgagatttatttttgtctactacatctacaatgtatatg 39146637  T
Q  210 a 210  Q
    |    
T  39146638 a 39146638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 11 - 202
Target Start/End: Complemental strand, 45558115 - 45557923
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  45558115 ccaataatataatattgacatataattttaacaaaagaatgaagtaatacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 45558016  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaat 202  Q
    |||| |||| ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  45558015 gttcgaatttcaacatctgcatatacttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaat 45557923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 11 - 199
Target Start/End: Original strand, 24119205 - 24119394
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  24119205 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 24119304  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctac 199  Q
    |||  ||||||||||||||||||||||| |||||| |||||||||| ||||| |||||||||||||||||||||||||||||| ||||||    
T  24119305 gtttgaattccaacatctgcatatatttgggaccatatatttcattatctttaatatgcattgagatttgtttttgtctactacatctac 24119394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 11 - 204
Target Start/End: Original strand, 49478206 - 49478400
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  49478206 ccaataatataacattgacatataattttaataaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 49478305  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 204  Q
    |||| ||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||| |||||||  ||||||||||    
T  49478306 gttcgaattccaacatttgcatatatttgggaccacatatttcattatctttgatatgtattgagatttgtttttatctactacgtctacaatgt 49478400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 55041820 - 55041614
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaa------taatatttttt-ggtgaataagcgtggtg 103  Q
    |||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||       ||||||||||  |||||||||| ||||||    
T  55041820 ccaataatataacattgacatataattttaacaaaagagtgaagtaacacacgattgataaaaataaaaattaatatttttaaggtgaataagtgtggtg 55041721  T
Q  104 tctgaggttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatg 203  Q
    |||||||||| ||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  55041720 tctgaggttcgaattcaaacatctgcatatatttggaaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatg 55041621  T
Q  204 tgtatga 210  Q
    | |||||    
T  55041620 tatatga 55041614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 58 - 210
Target Start/End: Complemental strand, 40014837 - 40014684
Alignment:
Q  58 cacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttcaaattccaacatctgcatatatttaggaccacatatttcattc 156  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  40014837 cacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattc 40014738  T
Q  157 tctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatga 210  Q
    |||||||||||||||||||||||||||||| || |||||||||||||| |||||    
T  40014737 tctttgatatgcattgagatttgtttttgtttattatatctacaatgtatatga 40014684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 87 - 209
Target Start/End: Complemental strand, 26051457 - 26051334
Alignment:
Q  87 ggtgaataagcgtggtgtctgaggttcaaattccaacatctgcatatatttagg-accacatatttcattctctttgatatgcattgagatttgtttttg 185  Q
    ||||||||||||||||||||||||||| ||||||||| || |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  26051457 ggtgaataagcgtggtgtctgaggttcgaattccaacctcagcatatatttggggaccacatatttcattctctttgatatgcattgagatttgtttttg 26051358  T
Q  186 tctactatatctacaatgtgtatg 209  Q
    ||||||| ||||||||||| ||||    
T  26051357 tctactacatctacaatgtatatg 26051334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 84
Target Start/End: Complemental strand, 26052309 - 26052236
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt 84  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  26052309 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttt 26052236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 139 - 210
Target Start/End: Complemental strand, 6460269 - 6460199
Alignment:
Q  139 ggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatga 210  Q
    ||||||||||||| ||||| ||||||||| |||||||||||||||||||||||| ||||||||||| |||||    
T  6460269 ggaccacatattttattct-tttgatatgtattgagatttgtttttgtctactacatctacaatgtatatga 6460199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 1942033 - 1941990
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  1942033 aatataacattaacatataatttttacaaaagaatgaagtaaca 1941990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 3898338 - 3898381
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  3898338 aatataacattaacatataatttttacaaaagaatgaagtaaca 3898381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 12264115 - 12264158
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  12264115 aatataacattaacatataatttttacaaaagaatgaagtaaca 12264158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 20671166 - 20671209
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  20671166 aatataacattaacatataatttttacaaaagaatgaagtaaca 20671209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 21098219 - 21098262
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  21098219 aatataacattaacatataatttttacaaaagaatgaagtaaca 21098262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 26052392 - 26052349
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  26052392 aatataacattaacatataatttttacaaaagaatgaagtaaca 26052349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 26948689 - 26948732
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  26948689 aatataacattaacatataatttttacaaaagaatgaagtaaca 26948732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 31488329 - 31488372
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  31488329 aatataacattaacatataatttttacaaaagaatgaagtaaca 31488372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 34121271 - 34121314
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  34121271 aatataacattaacatataatttttacaaaagaatgaagtaaca 34121314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 38654241 - 38654198
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  38654241 aatataacattaacatataatttttacaaaagaatgaagtaaca 38654198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 43363924 - 43363881
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  43363924 aatataacattaacatataatttttacaaaagaatgaagtaaca 43363881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 49478124 - 49478167
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  49478124 aatataacattaacatataatttttacaaaagaatgaagtaaca 49478167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 49672478 - 49672521
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  49672478 aatataacattaacatataatttttacaaaagaatgaagtaaca 49672521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 55041901 - 55041858
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  55041901 aatataacattaacatataatttttacaaaagaatgaagtaaca 55041858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 36076764 - 36076723
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaa 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||    
T  36076764 aatataacattaacatataatttttacaaaagaatgaagtaa 36076723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 173; Significance: 4e-93; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 11 - 210
Target Start/End: Original strand, 41663235 - 41663435
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  41663235 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 41663334  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  41663335 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 41663434  T
Q  210 a 210  Q
    |    
T  41663435 a 41663435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 11 - 210
Target Start/End: Original strand, 41664508 - 41664708
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  41664508 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 41664607  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  41664608 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 41664707  T
Q  210 a 210  Q
    |    
T  41664708 a 41664708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 11 - 210
Target Start/End: Original strand, 6120550 - 6120750
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  6120550 ccaataatataatattgacatatagttttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 6120649  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  6120650 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 6120749  T
Q  210 a 210  Q
    |    
T  6120750 a 6120750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 11 - 210
Target Start/End: Original strand, 18351549 - 18351749
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||    
T  18351549 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtttgag 18351648  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18351649 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 18351748  T
Q  210 a 210  Q
    |    
T  18351749 a 18351749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 164; E-Value: 8e-88
Query Start/End: Original strand, 11 - 210
Target Start/End: Original strand, 44902080 - 44902279
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatattttttggtgaataagcgtggtgtctgagg 110  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||   |||||| |||||||||||||||||||||||    
T  44902080 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattatattttttttgtgaataagcgtggtgtctgagg 44902179  T
Q  111 ttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatga 210  Q
    ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  44902180 ttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 44902279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 16 - 210
Target Start/End: Original strand, 20544828 - 20545023
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgaggttca 114  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||| | ||||||     
T  20544828 aatataatattgacatataattttaacaaaagaatgaagtaccacacgattgataaaaattaatatttttttggtgaataagcgtggtgttttaggttcg 20544927  T
Q  115 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatga 210  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  20544928 aattctaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctaccatatctacaatgtatatga 20545023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 19596594 - 19596394
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||  |||||||||||||||||||||||    
T  19596594 ccaataatttaacattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatttttaaggtgaataagcgtggtgtctgag 19596495  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||    
T  19596494 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttaatatgcattgagatttgtttttgtctactacatctacaatgtatatg 19596395  T
Q  210 a 210  Q
    |    
T  19596394 a 19596394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 11 - 210
Target Start/End: Original strand, 31424007 - 31424207
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||  |||||||||| ||||||| ||||    
T  31424007 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatttttaaggtgaataagtgtggtgtatgag 31424106  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  31424107 gttcgaattccaacatctacatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 31424206  T
Q  210 a 210  Q
    |    
T  31424207 a 31424207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 11 - 210
Target Start/End: Original strand, 42441958 - 42442162
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||| |||||||||||||||||||||||    
T  42441958 ccaataatataatattgacatataattttaacaaaagaatgaagtaacac--gattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 42442055  T
Q  110 gttcaaatt------ccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatg 203  Q
    |||| ||||      ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42442056 gttcgaattcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatg 42442155  T
Q  204 tgtatga 210  Q
    | |||||    
T  42442156 tatatga 42442162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 11 - 210
Target Start/End: Original strand, 8700259 - 8700459
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||| ||  ||||||| ||||    
T  8700259 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaaaaaatgtggtgtatgag 8700358  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  8700359 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgaaatttgtttttgtctactacatctacaatgtatatg 8700458  T
Q  210 a 210  Q
    |    
T  8700459 a 8700459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 36279685 - 36279485
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| ||||| ||||||    
T  36279685 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtatctgag 36279586  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
     ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||| ||||    
T  36279585 attcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatacattgatatttgtttttgtctactacatctacaatgtatatg 36279486  T
Q  210 a 210  Q
    |    
T  36279485 a 36279485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 11 - 204
Target Start/End: Complemental strand, 26231490 - 26231296
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatattttttgg-tgaataagcgtggtgtctgag 109  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  | |||||||| ||||||||||||    
T  26231490 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaagatgaataagtgtggtgtctgag 26231391  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 204  Q
    |||| |||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  26231390 gttcgaattccaacatctgaatatatttgagaccacatatttcattctctttgatatgcattgaaatttgtttttgtctactacatctacaatgt 26231296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 16 - 203
Target Start/End: Complemental strand, 34007935 - 34007747
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 114  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||  |||| ||||| ||||||||||||||||     
T  34007935 aatataacattgacatataattttaacaaaagaatgaagtaacacacgatttataaaaattaatatttttaaggtggataagtgtggtgtctgaggttcg 34007836  T
Q  115 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatg 203  Q
    |||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  34007835 aattccaacatcggcatatatttgggactacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatg 34007747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 11 - 210
Target Start/End: Original strand, 42055197 - 42055395
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||| |||||||||  || ||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  42055197 ccaataatataacattgacata--atcttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 42055294  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  42055295 gttcgaattccaacatctgcatatatttgggatcacctatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 42055394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 999462 - 999262
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  999462 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 999363  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||| ||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||| ||||||| |||||||| || ||||    
T  999362 gttcgaattccaacatctacatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttatctactacatctacaaagtatatg 999263  T
Q  210 a 210  Q
    |    
T  999262 a 999262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 26 - 200
Target Start/End: Original strand, 16214837 - 16215012
Alignment:
Q  26 tgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttcaaattccaaca 124  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||  |||||||||| |||||||  ||||||| |||||| |||    
T  16214837 tgacatataattttaacaaaagaatgaagtaacacacgattaataaaaattaatatttttaaggtgaataagtgtggtgttagaggttcgaattcctaca 16214936  T
Q  125 tctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctaca 200  Q
    | ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  16214937 tttgcatatattttggaccacatatttcattctctttgatatgcattgagatttatttttgtctactacatctaca 16215012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 81 - 210
Target Start/End: Complemental strand, 27944956 - 27944827
Alignment:
Q  81 ttttttggtgaataagcgtggtgtctgaggttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgt 180  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  27944956 tttttttgtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgt 27944857  T
Q  181 ttttgtctactatatctacaatgtgtatga 210  Q
    |||||||||||||||||||||||| |||||    
T  27944856 ttttgtctactatatctacaatgtatatga 27944827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 87 - 210
Target Start/End: Complemental strand, 692356 - 692233
Alignment:
Q  87 ggtgaataagcgtggtgtctgaggttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgt 186  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  692356 ggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccatatatttcattctctttgatatgcattgagatttgtttttgt 692257  T
Q  187 ctactatatctacaatgtgtatga 210  Q
    |||||| || |||||||| |||||    
T  692256 ctactacatttacaatgtatatga 692233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 19596677 - 19596634
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||    
T  19596677 aatataacattaacatataattttaacaaaagaatgaagtaaca 19596634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 6120467 - 6120510
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  6120467 aatataacattaacatataatttttacaaaagaatgaagtaaca 6120510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 16214741 - 16214784
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  16214741 aatataacattaacatataatttttacaaaagaatgaagtaaca 16214784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 18351467 - 18351510
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  18351467 aatataacattaacatataatttttacaaaagaatgaagtaaca 18351510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 26231570 - 26231527
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  26231570 aatataacattaacatataatttttacaaaagaatgaagtaaca 26231527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 31423924 - 31423967
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  31423924 aatataacattaacatataatttttacaaaagaatgaagtaaca 31423967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 34008023 - 34007980
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  34008023 aatataacattaacatataatttttacaaaagaatgaagtaaca 34007980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 41663152 - 41663195
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  41663152 aatataacattaacatataatttttacaaaagaatgaagtaaca 41663195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 42441876 - 42441919
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  42441876 aatataacattaacatataatttttacaaaagaatgaagtaaca 42441919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 173; Significance: 4e-93; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 11 - 210
Target Start/End: Original strand, 4266379 - 4266579
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  4266379 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 4266478  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  4266479 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 4266578  T
Q  210 a 210  Q
    |    
T  4266579 a 4266579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 34888917 - 34888717
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  34888917 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 34888818  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  34888817 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 34888718  T
Q  210 a 210  Q
    |    
T  34888717 a 34888717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 38913978 - 38913778
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  38913978 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 38913879  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  38913878 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 38913779  T
Q  210 a 210  Q
    |    
T  38913778 a 38913778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 11 - 210
Target Start/End: Original strand, 50151058 - 50151258
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  50151058 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 50151157  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  50151158 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 50151257  T
Q  210 a 210  Q
    |    
T  50151258 a 50151258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 2951597 - 2951397
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  2951597 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 2951498  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| || ||||| |||||||| ||||    
T  2951497 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttttttttgtttattatatttacaatgtatatg 2951398  T
Q  210 a 210  Q
    |    
T  2951397 a 2951397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 30 - 210
Target Start/End: Original strand, 1231813 - 1231994
Alignment:
Q  30 atataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgaggttcaaattccaacatctg 128  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  1231813 atataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctg 1231912  T
Q  129 catatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatga 210  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  1231913 catatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatttacaatgtatatga 1231994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 11 - 199
Target Start/End: Original strand, 7333942 - 7334131
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatattttt-tggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||    
T  7333942 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttatggtgaataagtgtggtgtctgag 7334041  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctac 199  Q
    |||  ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  7334042 gtttgaattccaacatctgcatatatttgggaccacatattttattctctttgatatgcattgagatttgtttttgtctactacatctac 7334131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 11 - 210
Target Start/End: Original strand, 9216029 - 9216229
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  ||| |||||| ||||||||||||    
T  9216029 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtaaataagtgtggtgtctgag 9216128  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  9216129 gttcgaattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttatctactatatctacaatgtatatg 9216228  T
Q  210 a 210  Q
    |    
T  9216229 a 9216229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 23482938 - 23482738
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| ||||||| ||||    
T  23482938 ccaataatataacgttgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttcaggtgaataagtgtggtgtatgag 23482839  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||    
T  23482838 gttcgaattccaacatctgcatatatttgggaccacatatttcatgctctttgatatgcattgagatttgtatttgtctactacatctacaatgtatatg 23482739  T
Q  210 a 210  Q
    |    
T  23482738 a 23482738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 11 - 210
Target Start/End: Original strand, 35614065 - 35614265
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| ||||||||| |     
T  35614065 ccaataatatgacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttcaggtgaataagtgtggtgtcttaa 35614164  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| ||||    
T  35614165 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatttacaatgtatatg 35614264  T
Q  210 a 210  Q
    |    
T  35614265 a 35614265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 11 - 201
Target Start/End: Original strand, 39727978 - 39728169
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  39727978 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 39728077  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaa 201  Q
    |||| ||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  39728078 gttcgaattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaa 39728169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 18706739 - 18706540
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| |||||||  ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||  |||||||||| ||||||| ||||    
T  18706739 ccaataatataacgttgacatataattttaacaaaagaatgaagttacacacgattgataaaaattaatatttttcaggtgaataagtgtggtgtatgag 18706640  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||    
T  18706639 gttcgaattccaacatctgcatatattt-ggaccacatatttcattctctttgatatgcattaagatttgtttttgtctactacatctacaatgtatatg 18706541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 11 - 210
Target Start/End: Original strand, 38444629 - 38444829
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||| ||||||||||||||||| ||||||||||||||||||||  ||||||||||| ||||||||||  |||||||||| |||||||||||     
T  38444629 ccaataatataacattgacatataattttatcaaaagaatgaagtaacacattattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaa 38444728  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  38444729 gttcgaatttcaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 38444828  T
Q  210 a 210  Q
    |    
T  38444829 a 38444829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 24 - 202
Target Start/End: Original strand, 35614827 - 35615005
Alignment:
Q  24 attgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatattttttggtgaataagcgtggtgtctgaggttcaaattccaac 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  ||| |||||| |||||||||||||||| |||||||||    
T  35614827 attgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatattttaaggtaaataagtgtggtgtctgaggttcgaattccaac 35614926  T
Q  124 atctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaat 202  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||    
T  35614927 atctgcatatatttgagaccacatatttcattctctttgatatgcattaagatttgtttttgtctactacatttacaat 35615005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 16 - 210
Target Start/End: Complemental strand, 52687339 - 52687145
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 114  Q
    ||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||  |||||||||| ||||||| ||||||||     
T  52687339 aatataacattgacatataattttaataaaaaaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgt-tgaggttcg 52687241  T
Q  115 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatga 210  Q
     |||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||| |||||    
T  52687240 gattccaacatctgcatatatttgggaccacatatttcattctctttcataggcattgagatttgtttttgtatactacatctacaatgtatatga 52687145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 81 - 210
Target Start/End: Original strand, 50326070 - 50326199
Alignment:
Q  81 ttttttggtgaataagcgtggtgtctgaggttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgt 180  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  50326070 ttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgt 50326169  T
Q  181 ttttgtctactatatctacaatgtgtatga 210  Q
    |||||||||||||||||||||||| |||||    
T  50326170 ttttgtctactatatctacaatgtatatga 50326199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 18855463 - 18855264
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  18855463 ccaataatataacattgacatataattttaacaaaagaatgaagtaatacatgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 18855364  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatg 209  Q
    |||| |||| |||||||| ||||||||| ||||||||| ||| |||||||||||||||||||||||||||  ||||||||||  ||||||||||| ||||    
T  18855363 gttcgaatttcaacatctacatatatttgggaccacatgttttattctctttgatatgcattgagatttg-atttgtctactgcatctacaatgtatatg 18855265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 86 - 210
Target Start/End: Complemental strand, 31018355 - 31018231
Alignment:
Q  86 tggtgaataagcgtggtgtctgaggttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttg 185  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  31018355 tggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttg 31018256  T
Q  186 tctactatatctacaatgtgtatga 210  Q
    ||||||||||||||||||| |||||    
T  31018255 tctactatatctacaatgtatatga 31018231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 24 - 198
Target Start/End: Complemental strand, 19764768 - 19764593
Alignment:
Q  24 attgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttcaaattccaa 122  Q
    |||||||| |||||||||||||| ||||||||||||||||||| ||||||| ||||||||||  |||||||||| |||||||||||||||| ||||| ||    
T  19764768 attgacatgtaattttaacaaaataatgaagtaacacacgattcataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattcaaa 19764669  T
Q  123 catctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatcta 198  Q
    ||| ||||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||| ||||| |||||    
T  19764668 catttgcatatatttgggaccacatatttcattctttttaatatgcattgagatttgtttttgtatactacatcta 19764593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 11 - 150
Target Start/End: Original strand, 19768462 - 19768602
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatattttt-tggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||| ||||||||||||    
T  19768462 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttaagatgaataagtgtggtgtctgag 19768561  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatt 150  Q
    |||| || | |||||||| ||| ||||| | ||||||||||    
T  19768562 gttcgaaattcaacatctacatgtatttggaaccacatatt 19768602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 11 - 146
Target Start/End: Original strand, 2590333 - 2590468
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatattttt-tggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  2590333 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 2590432  T
Q  110 gttcaaattccaacatctgcatatatttaggaccaca 146  Q
    |||  ||||| ||||||||||||||||| | ||||||    
T  2590433 gtt-gaattcgaacatctgcatatatttggaaccaca 2590468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 124 - 204
Target Start/End: Original strand, 5061335 - 5061415
Alignment:
Q  124 atctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 204  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  5061335 atctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgt 5061415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 147 - 210
Target Start/End: Original strand, 29942153 - 29942216
Alignment:
Q  147 tatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtgtatga 210  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  29942153 tatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 29942216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 1231725 - 1231768
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  1231725 aatataacattaacatataatttttacaaaagaatgaagtaaca 1231768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 2951679 - 2951636
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  2951679 aatataacattaacatataatttttacaaaagaatgaagtaaca 2951636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 4266297 - 4266340
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  4266297 aatataacattaacatataatttttacaaaagaatgaagtaaca 4266340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 18706816 - 18706773
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  18706816 aatataacattaacatataatttttacaaaagaatgaagtaaca 18706773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 19764857 - 19764814
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  19764857 aatataacattaacatataatttttacaaaagaatgaagtaaca 19764814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 19768382 - 19768425
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  19768382 aatataacattaacatataatttttacaaaagaatgaagtaaca 19768425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 23483015 - 23482972
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  23483015 aatataacattaacatataatttttacaaaagaatgaagtaaca 23482972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 35613984 - 35614027
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  35613984 aatataaaattaacatataatttttacaaaagaatgaagtaaca 35614027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 35614734 - 35614777
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  35614734 aatataacattaacatataatttttacaaaagaatgaagtaaca 35614777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 38914060 - 38914017
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  38914060 aatataacattaacatataatttttacaaaagaatgaagtaaca 38914017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 52036353 - 52036310
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  52036353 aatataacattaacatataatttttacaaaagaatgaagtaaca 52036310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 7333863 - 7333903
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagta 56  Q
    ||||||| ||| |||||||||||| ||||||||||||||||    
T  7333863 aatataacattaacatataatttttacaaaagaatgaagta 7333903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 141; Significance: 4e-74; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 11 - 202
Target Start/End: Complemental strand, 149281 - 149089
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| || |||| |||     
T  149281 ccaataatataacgttgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgttgtgtttgat 149182  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaat 202  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  149181 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaat 149089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 149361 - 149318
Alignment:
Q  16 aatataatattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  149361 aatataacattaacatataatttttacaaaagaatgaagtaaca 149318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 139; Significance: 7e-73; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 11 - 204
Target Start/End: Original strand, 19345 - 19539
Alignment:
Q  11 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 109  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  19345 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 19444  T
Q  110 gttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 204  Q
    |||| ||||||||||||||||||||||| ||||||||||||| ||| ||||| |||||||||||||||||||||||||||||| |||||||||||    
T  19445 gttcgaattccaacatctgcatatatttgggaccacatatttaattatctttaatatgcattgagatttgtttttgtctactacatctacaatgt 19539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0836 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold0836
Description:

Target: scaffold0836; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 89 - 209
Target Start/End: Complemental strand, 5430 - 5310
Alignment:
Q  89 tgaataagcgtggtgtctgaggttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtct 188  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5430 tgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtct 5331  T
Q  189 actatatctacaatgtgtatg 209  Q
    | |||||||||||||| ||||    
T  5330 attatatctacaatgtatatg 5310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 89 - 210
Target Start/End: Complemental strand, 6213 - 6092
Alignment:
Q  89 tgaataagcgtggtgtctgaggttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtct 188  Q
    |||||||| ||||||| |||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  6213 tgaataagtgtggtgtttgaggttcgaattccaacatctgcatatatttgagaccacatatttcattctctttgatatgcattgagatatgtttttgtct 6114  T
Q  189 actatatctacaatgtgtatga 210  Q
    || | ||||||||||| |||||    
T  6113 acaacatctacaatgtatatga 6092  T

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Target: scaffold0306 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 89 - 210
Target Start/End: Complemental strand, 6223 - 6102
Alignment:
Q  89 tgaataagcgtggtgtctgaggttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtct 188  Q
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T  6223 tgaataagtgtggtgtttgaggttcgaattccaacatctgcatatatttgagaccacatatttcattctctttgatatgcattgagatatgtttttgtct 6124  T
Q  189 actatatctacaatgtgtatga 210  Q
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T  6123 acaacatctacaatgtatatga 6102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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