View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10140A_low_460 (Length: 220)
Name: NF10140A_low_460
Description: NF10140A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10140A_low_460 |
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Alignment Details
Target: chr2 (Bit Score: 166; Significance: 5e-89; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 19 - 206
Target Start/End: Original strand, 3015575 - 3015759
Alignment:
| Q |
19 |
aaaggattcaaggaaatggacttgttatgtcatacttcttgctatcgtcctcgtcatcgtgctcctgtttccattgttgatgtcaattctacctcacttg |
118 |
Q |
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| T |
3015575 |
aaaggattcaaggaaatggacttgttatgtcatacttcttgctatcgtcctcgtcatcgtgctcctgtttccattgttgatgtcaattctacctcacttg |
3015674 |
T |
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| Q |
119 |
tttctgtagaattaaaaggtcaaagtcgtcgtcgtcatcatcatcgttattaaacaaagaatcttagagagaattagattttatgcat |
206 |
Q |
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|||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
3015675 |
tttctgtagaattaaaaggtcaaa---gtcgtcatcatcatcatcgttattaaacaaagaatcttagagagtattagattttatgcat |
3015759 |
T |
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