View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10140A_low_50 (Length: 396)

Name: NF10140A_low_50
Description: NF10140A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10140A_low_50
NF10140A_low_50
[»] chr4 (39 HSPs)
chr4 (218-384)||(51015042-51015208)
chr4 (216-384)||(11006612-11006781)
chr4 (216-384)||(9176867-9177035)
chr4 (224-384)||(37089745-37089906)
chr4 (216-363)||(16932213-16932360)
chr4 (214-363)||(22783170-22783319)
chr4 (224-384)||(24888598-24888758)
chr4 (216-384)||(9174517-9174684)
chr4 (214-358)||(16934572-16934716)
chr4 (216-371)||(36919971-36920125)
chr4 (218-384)||(22803104-22803270)
chr4 (216-384)||(38408993-38409161)
chr4 (216-384)||(5637839-5638006)
chr4 (213-384)||(36921866-36922036)
chr4 (216-363)||(22780805-22780952)
chr4 (249-384)||(22044760-22044897)
chr4 (216-384)||(3824944-3825112)
chr4 (253-384)||(31849970-31850101)
chr4 (216-333)||(7941133-7941251)
chr4 (273-384)||(11008963-11009075)
chr4 (216-333)||(11434769-11434887)
chr4 (216-358)||(18846923-18847067)
chr4 (268-384)||(5198266-5198382)
chr4 (249-384)||(48486146-48486281)
chr4 (249-354)||(9148087-9148192)
chr4 (249-333)||(22801262-22801346)
chr4 (270-384)||(24880299-24880413)
chr4 (249-354)||(52942869-52942974)
chr4 (303-384)||(22047055-22047135)
chr4 (270-384)||(619818-619932)
chr4 (321-384)||(52942818-52942881)
chr4 (247-384)||(40091786-40091923)
chr4 (269-384)||(24878836-24878951)
chr4 (249-299)||(22048492-22048542)
chr4 (342-384)||(47274647-47274689)
chr4 (309-358)||(16689331-16689380)
chr4 (310-358)||(8529012-8529060)
chr4 (340-384)||(11434873-11434917)
chr4 (340-384)||(22801232-22801276)
[»] chr1 (29 HSPs)
chr1 (21-215)||(50767536-50767747)
chr1 (216-384)||(20302198-20302367)
chr1 (216-384)||(51752104-51752273)
chr1 (216-384)||(13761577-13761745)
chr1 (216-384)||(51749778-51749947)
chr1 (244-384)||(6823651-6823792)
chr1 (216-384)||(10400201-10400369)
chr1 (224-363)||(16225895-16226034)
chr1 (216-358)||(47179428-47179570)
chr1 (249-384)||(28840451-28840586)
chr1 (216-363)||(47177078-47177224)
chr1 (249-384)||(15823319-15823454)
chr1 (249-384)||(28842266-28842401)
chr1 (216-333)||(6822775-6822893)
chr1 (216-354)||(23783238-23783376)
chr1 (215-321)||(20291279-20291386)
chr1 (244-333)||(16231369-16231458)
chr1 (249-384)||(13214854-13214989)
chr1 (249-384)||(3579991-3580126)
chr1 (319-363)||(23783362-23783406)
chr1 (273-384)||(41646717-41646828)
chr1 (216-298)||(47451405-47451488)
chr1 (269-358)||(30790793-30790882)
chr1 (323-379)||(28207444-28207500)
chr1 (268-384)||(39462310-39462426)
chr1 (249-333)||(49687334-49687418)
chr1 (249-298)||(38925915-38925965)
chr1 (309-358)||(13449947-13449996)
chr1 (336-384)||(47451508-47451556)
[»] chr2 (18 HSPs)
chr2 (224-384)||(19502382-19502542)
chr2 (224-384)||(27104523-27104683)
chr2 (215-380)||(19504720-19504885)
chr2 (216-363)||(24162604-24162752)
chr2 (216-363)||(36559211-36559358)
chr2 (249-384)||(21521066-21521201)
chr2 (216-354)||(36561539-36561677)
chr2 (216-363)||(45332528-45332675)
chr2 (249-384)||(42064264-42064399)
chr2 (249-384)||(6259186-6259321)
chr2 (224-333)||(43623968-43624077)
chr2 (308-384)||(13910415-13910491)
chr2 (249-384)||(22407780-22407915)
chr2 (319-363)||(36561488-36561532)
chr2 (268-333)||(6264546-6264611)
chr2 (249-334)||(40032468-40032553)
chr2 (340-384)||(43623938-43623982)
chr2 (319-354)||(36561518-36561553)
[»] chr3 (36 HSPs)
chr3 (216-384)||(22114674-22114842)
chr3 (216-356)||(6063866-6064006)
chr3 (216-363)||(18099560-18099707)
chr3 (217-384)||(5191374-5191541)
chr3 (215-363)||(50493675-50493823)
chr3 (216-363)||(38210067-38210214)
chr3 (232-345)||(10192401-10192513)
chr3 (216-357)||(53896613-53896754)
chr3 (233-365)||(5899476-5899608)
chr3 (232-345)||(10085481-10085593)
chr3 (275-384)||(10956396-10956505)
chr3 (216-347)||(18097291-18097422)
chr3 (215-333)||(38889756-38889875)
chr3 (216-365)||(5885983-5886133)
chr3 (273-365)||(25388654-25388746)
chr3 (215-384)||(32264412-32264581)
chr3 (216-333)||(35777163-35777280)
chr3 (249-384)||(1321194-1321329)
chr3 (249-384)||(5522984-5523119)
chr3 (249-333)||(11162924-11163008)
chr3 (249-384)||(26720301-26720436)
chr3 (309-384)||(10958692-10958767)
chr3 (249-331)||(11170178-11170260)
chr3 (216-333)||(6719532-6719651)
chr3 (216-299)||(7606880-7606963)
chr3 (249-384)||(24177032-24177167)
chr3 (274-333)||(6066195-6066254)
chr3 (318-384)||(3859350-3859416)
chr3 (309-384)||(45882752-45882827)
chr3 (214-264)||(3859315-3859365)
chr3 (340-384)||(35777266-35777309)
chr3 (309-358)||(4308676-4308725)
chr3 (339-384)||(10084762-10084807)
chr3 (339-384)||(10191682-10191727)
chr3 (340-384)||(6719502-6719546)
chr3 (340-384)||(38889861-38889905)
[»] scaffold0127 (1 HSPs)
scaffold0127 (216-363)||(12907-13054)
[»] chr6 (16 HSPs)
chr6 (216-384)||(14507546-14507716)
chr6 (249-384)||(19227780-19227915)
chr6 (216-363)||(26068735-26068882)
chr6 (249-384)||(8995288-8995423)
chr6 (249-384)||(9019735-9019870)
chr6 (216-363)||(26066464-26066611)
chr6 (216-363)||(33308685-33308832)
chr6 (216-363)||(33310954-33311101)
chr6 (216-363)||(29755132-29755279)
chr6 (224-384)||(11983400-11983558)
chr6 (273-384)||(4816639-4816749)
chr6 (249-365)||(15530512-15530628)
chr6 (299-384)||(30729199-30729284)
chr6 (309-358)||(26084818-26084867)
chr6 (268-333)||(32279845-32279910)
chr6 (299-384)||(15541511-15541596)
[»] chr5 (37 HSPs)
chr5 (216-363)||(34477485-34477632)
chr5 (249-384)||(38881878-38882013)
chr5 (216-333)||(2174680-2174797)
chr5 (216-384)||(31544798-31544966)
chr5 (216-363)||(10749505-10749652)
chr5 (224-365)||(4236378-4236519)
chr5 (216-384)||(31542442-31542610)
chr5 (216-363)||(10756960-10757107)
chr5 (216-363)||(15354918-15355065)
chr5 (216-363)||(15357194-15357341)
chr5 (216-333)||(34479855-34479972)
chr5 (216-333)||(39797849-39797966)
chr5 (249-384)||(16775930-16776065)
chr5 (215-333)||(25921874-25921993)
chr5 (215-363)||(23664833-23664981)
chr5 (215-363)||(23793606-23793754)
chr5 (216-363)||(23667109-23667256)
chr5 (273-363)||(31179807-31179897)
chr5 (307-384)||(21684832-21684909)
chr5 (249-333)||(659746-659829)
chr5 (216-333)||(38960487-38960604)
chr5 (271-351)||(659850-659929)
chr5 (249-384)||(21947803-21947935)
chr5 (214-314)||(18186489-18186589)
chr5 (216-333)||(31466379-31466496)
chr5 (249-333)||(2818729-2818813)
chr5 (249-352)||(20504316-20504419)
chr5 (249-384)||(20507833-20507968)
chr5 (216-280)||(21684905-21684969)
chr5 (216-314)||(36402747-36402845)
chr5 (309-358)||(39854317-39854366)
chr5 (309-358)||(42238047-42238096)
chr5 (309-357)||(1240171-1240219)
chr5 (309-365)||(4409890-4409946)
chr5 (249-332)||(12556325-12556408)
chr5 (216-264)||(31179885-31179933)
chr5 (344-384)||(39797956-39797996)
[»] chr8 (15 HSPs)
chr8 (216-363)||(18812668-18812815)
chr8 (216-363)||(43079347-43079494)
chr8 (216-355)||(43081722-43081861)
chr8 (249-384)||(27826815-27826950)
chr8 (249-384)||(27829126-27829261)
chr8 (249-384)||(12517397-12517532)
chr8 (216-363)||(18810483-18810630)
chr8 (216-384)||(44720617-44720785)
chr8 (224-384)||(14807556-14807716)
chr8 (224-384)||(15067785-15067945)
chr8 (249-354)||(28251988-28252093)
chr8 (216-384)||(15072506-15072674)
chr8 (244-333)||(3886322-3886412)
chr8 (249-333)||(4423868-4423952)
chr8 (319-384)||(28251937-28252002)
[»] chr7 (20 HSPs)
chr7 (216-384)||(3878322-3878490)
chr7 (216-363)||(1047356-1047503)
chr7 (216-363)||(2935070-2935217)
chr7 (216-363)||(9027540-9027687)
chr7 (216-363)||(22136878-22137025)
chr7 (216-363)||(40551905-40552052)
chr7 (215-384)||(27306600-27306768)
chr7 (216-363)||(22107867-22108014)
chr7 (216-363)||(40549627-40549774)
chr7 (216-333)||(40837144-40837261)
chr7 (249-384)||(35412-35547)
chr7 (249-384)||(44347-44482)
chr7 (253-384)||(25542317-25542448)
chr7 (216-333)||(26804345-26804462)
chr7 (249-384)||(18567396-18567531)
chr7 (249-384)||(31435418-31435553)
chr7 (249-330)||(1049699-1049780)
chr7 (340-384)||(26804448-26804492)
chr7 (309-358)||(40946167-40946216)
chr7 (303-384)||(42006404-42006484)
[»] scaffold0250 (1 HSPs)
scaffold0250 (257-384)||(2670-2797)
[»] scaffold0140 (2 HSPs)
scaffold0140 (216-363)||(21915-22062)
scaffold0140 (216-363)||(24190-24337)
[»] scaffold0025 (2 HSPs)
scaffold0025 (224-384)||(69665-69825)
scaffold0025 (224-333)||(73427-73536)
[»] scaffold0472 (1 HSPs)
scaffold0472 (216-363)||(5927-6074)
[»] scaffold0068 (2 HSPs)
scaffold0068 (307-384)||(29001-29078)
scaffold0068 (216-280)||(28941-29005)
[»] scaffold0131 (1 HSPs)
scaffold0131 (217-384)||(14768-14936)
[»] scaffold0339 (1 HSPs)
scaffold0339 (342-384)||(3872-3914)


Alignment Details
Target: chr4 (Bit Score: 127; Significance: 2e-65; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 218 - 384
Target Start/End: Original strand, 51015042 - 51015208
Alignment:
Q  218 tgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactggaaa 317  Q
    ||||| ||||||| ||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  51015042 tgagagttaacttaaaatcagatttctgcagaatcgtggcatgatggcaaggcaacgtggcacgatggaggtttcagttttttaggcaaggcactggaaa 51015141  T
Q  318 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 384  Q
    ||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||    
T  51015142 aattgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcagcgaataacagaaacatatt 51015208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 216 - 384
Target Start/End: Complemental strand, 11006781 - 11006612
Alignment:
Q  216 tgtgagatttaacttcaaatcagattt-atgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgg 314  Q
    ||||||| ||||||| ||||||| ||| ||||| |||||||||||||| ||  |||||||||||||||||||||||||| ||||| ||||||||||||||    
T  11006781 tgtgagagttaacttaaaatcaggttttatgcagaatcgtggcacgatcgctgggcaacgtggcacgatggaggtttcaattttttaggcaaggcactgg 11006682  T
Q  315 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 384  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||    
T  11006681 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcagcaaaaaacagaaacatatt 11006612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 216 - 384
Target Start/End: Complemental strand, 9177035 - 9176867
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 315  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||| ||  ||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  9177035 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgacggttaggcaacgtggcacgatggaggttttagttttttaggcaaggcactgga 9176936  T
Q  316 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 384  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||  || |||| |||||||||    
T  9176935 aaaatcgtggcacgatggggtctcatcgtggcacgatggtgcgctggcagggaaaaacagaaacatatt 9176867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 224 - 384
Target Start/End: Complemental strand, 37089906 - 37089745
Alignment:
Q  224 ttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatg-gaggtttcagtttttgaggcaaggcactggaaaaatcg 322  Q
    ||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||||||| || |||| ||||||| |||  |||||||||||||||||    
T  37089906 ttaacttaaaatcagatttctgcagaatcgtggcacgatggcaaggcaacgtggcacgatgagatgttttagttttttaggtgaggcactggaaaaatcg 37089807  T
Q  323 tggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 384  Q
    |||||||||||||||||||||||||||||||||||| |||| || ||||||| |||| ||||    
T  37089806 tggcacgatggggtcgcatcgtggcacgatggtgcgctggcggcgaataacagaaacgtatt 37089745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 216 - 363
Target Start/End: Complemental strand, 16932360 - 16932213
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 315  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||| |||  |||||||||||||||||||||||| |||||||  ||||||||||||||    
T  16932360 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttttagttttttgggcaaggcactgga 16932261  T
Q  316 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 363  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||    
T  16932260 aaaatcgtggcacgatggggtctcatcgtggcacgatggtgcgctggc 16932213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 214 - 363
Target Start/End: Complemental strand, 22783319 - 22783170
Alignment:
Q  214 aatgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactg 313  Q
    ||||||||| ||||||| ||||||| ||| |||| |||||||| ||||| ||  |||||||||||||||||||||||| |||||||  ||||||||||||    
T  22783319 aatgtgagagttaacttaaaatcaggtttctgcagaatcgtggtacgatagctgggcaacgtggcacgatggaggttttagttttttgggcaaggcactg 22783220  T
Q  314 gaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 363  Q
    |||||||| ||||||||||||||| |||||||||||||||||||| ||||    
T  22783219 gaaaaatcatggcacgatggggtctcatcgtggcacgatggtgcgctggc 22783170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 224 - 384
Target Start/End: Original strand, 24888598 - 24888758
Alignment:
Q  224 ttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcg 322  Q
    ||||||| ||||||||||| |||| ||| ||||||||||||| ||||||||||||||||| ||||||||||  ||| ||||||| |||||||||||||||    
T  24888598 ttaacttaaaatcagatttctgcagaattgtggcacgatggctaggcaacgtggcacgattggaggtttcaagttt-gaggcaaagcactggaaaaatcg 24888696  T
Q  323 tggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 384  Q
    |||||||||||| ||||||||||||||||||||| | ||||||| || |||| |||||||||    
T  24888697 tggcacgatgggatcgcatcgtggcacgatggtgtgctggcagcgaaaaacagaaacatatt 24888758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 216 - 384
Target Start/End: Complemental strand, 9174684 - 9174517
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 315  Q
    ||||||| ||||||| ||||||| ||  |||| ||||||||||||| ||| ||||||||| ||||||||||||||| ||||| | |||||||||||||||    
T  9174684 tgtgagagttaacttaaaatcaggttc-tgcagaatcgtggcacgacggctaggcaacgtagcacgatggaggttttagtttattaggcaaggcactgga 9174586  T
Q  316 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 384  Q
    |||||| ||||||||||||||| |||||||||||||||||||| ||||||  || |||| |||||||||    
T  9174585 aaaatcatggcacgatggggtctcatcgtggcacgatggtgcgctggcagggaaaaacagaaacatatt 9174517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 214 - 358
Target Start/End: Complemental strand, 16934716 - 16934572
Alignment:
Q  214 aatgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactg 313  Q
    ||||||||| ||||||| ||||||| ||| |||| ||||||||||||| |||  |||||| ||||||||||||||||| |||||||  ||||||||||||    
T  16934716 aatgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacatggcacgatggaggttttagttttttgggcaaggcactg 16934617  T
Q  314 gaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 358  Q
    |||||||||||||||||||||||| |||| |||||||||||||||    
T  16934616 gaaaaatcgtggcacgatggggtctcatcctggcacgatggtgcg 16934572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 216 - 371
Target Start/End: Complemental strand, 36920125 - 36919971
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactgg 314  Q
    ||||||| ||||||| ||||||| ||  |||| |||||||||||||||||  |||||||||||||||| |||||||||| |||| |||||||| ||||||    
T  36920125 tgtgagagttaacttaaaatcaggttc-tgcaaaatcgtggcacgatggctgggcaacgtggcacgattggaggtttcaatttt-gaggcaagtcactgg 36920028  T
Q  315 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaata 371  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  36920027 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcagcgaata 36919971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 218 - 384
Target Start/End: Complemental strand, 22803270 - 22803104
Alignment:
Q  218 tgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaa 316  Q
    ||||| ||||||| |||||| |||| |  | |||||||| ||||||||  |||||||||||||||| ||||||||||||||| |||| ||||||||||||    
T  22803270 tgagagttaacttaaaatcaaatttctatagaatcgtggtacgatggctgggcaacgtggcacgattggaggtttcagtttt-gaggaaaggcactggaa 22803172  T
Q  317 aaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 384  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||||| |||| ||||    
T  22803171 aaatcgtggctcgatggggtcgcatcgtggcacgatggtgcgctggcagcgaataacaaaaacgtatt 22803104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 216 - 384
Target Start/End: Original strand, 38408993 - 38409161
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactgg 314  Q
    ||||||| ||||||| |||| |||||| |||| |||||||||||||| ||  |||| ||||||||||| ||||||||||  ||| ||||||| |||||||    
T  38408993 tgtgagagttaacttaaaattagatttctgcagaatcgtggcacgattgctgggcatcgtggcacgattggaggtttcaagttt-gaggcaaagcactgg 38409091  T
Q  315 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 384  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| || || |||| |||||||||    
T  38409092 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgttggcggcgaaaaacagaaacatatt 38409161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 216 - 384
Target Start/End: Complemental strand, 5638006 - 5637839
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 315  Q
    ||||||| ||||||| ||||||| ||| |||  |||||||||||||| ||  ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  5638006 tgtgagagttaacttaaaatcaggtttctgcggaatcgtggcacgattgctgggcaacgtggcacgatggaggtttcagtttt-gaggcaaggcactgga 5637908  T
Q  316 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 384  Q
    |||||| || ||||||||| ||||||||||||| ||||||| | ||||||| || |||| |||| ||||    
T  5637907 aaaatcatgtcacgatgggatcgcatcgtggcatgatggtgagctggcagcgaaaaacagaaacgtatt 5637839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 213 - 384
Target Start/End: Complemental strand, 36922036 - 36921866
Alignment:
Q  213 taatgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcac 311  Q
    |||||||||| ||||||| ||||||| ||  |||| |||||||| ||||||||  |||||| ||||||||| ||||||||||||||| |||||||| |||    
T  36922036 taatgtgagagttaacttaaaatcaggttc-tgcaaaatcgtggtacgatggctgggcaacatggcacgattggaggtttcagtttt-gaggcaagtcac 36921939  T
Q  312 tggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 384  Q
    |||||||||||||||||||||||||||||| |||||||||||||||  ||||||| ||||||| |||| ||||    
T  36921938 tggaaaaatcgtggcacgatggggtcgcattgtggcacgatggtgcattggcagcgaataacagaaacgtatt 36921866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 216 - 363
Target Start/End: Complemental strand, 22780952 - 22780805
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 315  Q
    ||||||| ||||||| ||||||| ||| |||| |||||||| ||||| ||  |||||||||||||||||||||||| |||||||  ||||||||||||||    
T  22780952 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggtacgatagctgggcaacgtggcacgatggaggttttagttttttgggcaaggcactgga 22780853  T
Q  316 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 363  Q
    |||||| ||||||||||||||| ||| |||||||||||||||| ||||    
T  22780852 aaaatcatggcacgatggggtctcattgtggcacgatggtgcgctggc 22780805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 249 - 384
Target Start/End: Complemental strand, 22044897 - 22044760
Alignment:
Q  249 aatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagttttt--gaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtgg 346  Q
    |||||||||||||| | | |||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||| |||||||||||    
T  22044897 aatcgtggcacgattgaagggcaacgtggcacgatggaggtttcattttttttgaggcaaggcactggaaaaatcgtggcacgatgggatcgcatcgtgg 22044798  T
Q  347 cacgatggtgcggtggcagcaaataacataaacatatt 384  Q
    |||||||||| | ||||||  || |||| |||||||||    
T  22044797 cacgatggtgtgctggcagggaaaaacagaaacatatt 22044760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 216 - 384
Target Start/End: Complemental strand, 3825112 - 3824944
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactgg 314  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||| |||||||||  |||||| ||||||||| ||||||||||||||| ||||||| |||||||    
T  3825112 tgtgagagttaacttaaaatcaggtttctgcagaatcgtgacacgatggctgggcaacatggcacgattggaggtttcagtttt-gaggcaaagcactgg 3825014  T
Q  315 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 384  Q
    ||||||| |||||| ||||||||||||||||||||||||||||| ||||  | ||||||| |||| ||||    
T  3825013 aaaaatcatggcacaatggggtcgcatcgtggcacgatggtgcgttggcgacgaataacagaaacgtatt 3824944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 253 - 384
Target Start/End: Complemental strand, 31850101 - 31849970
Alignment:
Q  253 gtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacga 351  Q
    |||||||||| ||  |||||||||||||||| ||||||||||||||| | |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  31850101 gtggcacgattgctgggcaacgtggcacgattggaggtttcagttttgg-ggcaaggcactggaaaaatcttggcacgatggggtcgcatcgtggcacga 31850003  T
Q  352 tggtgcggtggcagcaaataacataaacatatt 384  Q
    ||||||| ||||||| || |||| |||||||||    
T  31850002 tggtgcgctggcagcgaaaaacagaaacatatt 31849970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 216 - 333
Target Start/End: Original strand, 7941133 - 7941251
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcag-tttttgaggcaaggcactgg 314  Q
    ||||||| ||||||| ||||||| ||| |||| |||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  7941133 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatggctgggcaacgtggcacgatggaggtttcagttttttgaggcaaggcactgg 7941232  T
Q  315 aaaaatcgtggcacgatgg 333  Q
    |||||| ||||||||||||    
T  7941233 aaaaatggtggcacgatgg 7941251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 273 - 384
Target Start/End: Complemental strand, 11009075 - 11008963
Alignment:
Q  273 cgtggcacgatggaggtttcagtttttg-aggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaata 371  Q
    |||||||| |||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |    
T  11009075 cgtggcacaatggaggtttcaatttttttaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcactggcagcaaaaa 11008976  T
Q  372 acataaacatatt 384  Q
    ||| |||||||||    
T  11008975 acagaaacatatt 11008963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 216 - 333
Target Start/End: Original strand, 11434769 - 11434887
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcag-tttttgaggcaaggcactgg 314  Q
    ||||||| ||||||| ||||||| ||| |||| |||||||| ||||||||  ||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  11434769 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggtacgatggctgggcaacgtggcacgatggaggtttcagttttttgaggcaagacactgg 11434868  T
Q  315 aaaaatcgtggcacgatgg 333  Q
    |||||||||||||||||||    
T  11434869 aaaaatcgtggcacgatgg 11434887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 216 - 358
Target Start/End: Original strand, 18846923 - 18847067
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttat--gcataatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcact 312  Q
    ||||||| ||||||| ||||||||||| |  ||| |||||||||||||| |   || | ||||||||||| ||||||||||||||| ||||||||| |||    
T  18846923 tgtgagagttaacttaaaatcagatttttctgcagaatcgtggcacgattgttgggaatcgtggcacgattggaggtttcagtttt-gaggcaaggtact 18847021  T
Q  313 ggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 358  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  18847022 ggaaaaatcgtggtacgatggggtcgcatcgtggcacgatggtgcg 18847067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 268 - 384
Target Start/End: Original strand, 5198266 - 5198382
Alignment:
Q  268 ggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagc 366  Q
    |||||||||||||||| |||| |||||  ||| ||||||| || |||||||||||||||||||||||| || |||||||||||||||||||| |||||||    
T  5198266 ggcaacgtggcacgattggagatttcaagttt-gaggcaaagctctggaaaaatcgtggcacgatgggatcacatcgtggcacgatggtgcgctggcagc 5198364  T
Q  367 aaataacataaacatatt 384  Q
     || |||| |||||||||    
T  5198365 gaaaaacagaaacatatt 5198382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 249 - 384
Target Start/End: Original strand, 48486146 - 48486281
Alignment:
Q  249 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 347  Q
    |||||||||||||||||   ||||||||||||||| ||||||||||||||| |||||||| |||||||    |||||||||||||||||| ||  |||||    
T  48486146 aatcgtggcacgatggctgagcaacgtggcacgattggaggtttcagtttt-gaggcaagtcactggatttttcgtggcacgatggggtcacaatgtggc 48486244  T
Q  348 acgatggtgcggtggcagcaaataacataaacatatt 384  Q
    || |||||||| ||||||| ||||||| |||| ||||    
T  48486245 acaatggtgcgctggcagcgaataacagaaacgtatt 48486281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 249 - 354
Target Start/End: Original strand, 9148087 - 9148192
Alignment:
Q  249 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 347  Q
    |||||||| ||||| ||  ||||||||||| |||| ||||||||||  ||| ||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  9148087 aatcgtggtacgattgctgggcaacgtggcgcgattggaggtttcaagttt-gaggcaaagcactggaaaaatcgtggcacgatggggttgcatcgtggc 9148185  T
Q  348 acgatgg 354  Q
    |||||||    
T  9148186 acgatgg 9148192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 249 - 333
Target Start/End: Complemental strand, 22801346 - 22801262
Alignment:
Q  249 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatgg 333  Q
    ||||||||||||||||   ||||||||| |||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  22801346 aatcgtggcacgatggttgggcaacgtgacacgattggaggtttcagtttt-gaggcaaggaactggaaaaatcgtggcacgatgg 22801262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 270 - 384
Target Start/End: Original strand, 24880299 - 24880413
Alignment:
Q  270 caacgtggcacga-tggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaa 368  Q
    ||||||||||||| |||||||||||||||| |||||||| |||||||    ||| ||||||||||| | ||| ||||||||||||||||| ||||||| |    
T  24880299 caacgtggcacgaatggaggtttcagtttt-gaggcaagtcactggatttttcgcggcacgatgggattgcaacgtggcacgatggtgcgctggcagcga 24880397  T
Q  369 ataacataaacatatt 384  Q
    |||||| |||| ||||    
T  24880398 ataacagaaacgtatt 24880413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 249 - 354
Target Start/End: Complemental strand, 52942974 - 52942869
Alignment:
Q  249 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 347  Q
    ||||||||||||||||   |||||||||||||||| ||||||||||| ||| |||||||| ||||| | |  |||||||||||||||||| || ||||||    
T  52942974 aatcgtggcacgatggttgggcaacgtggcacgattggaggtttcagcttt-gaggcaagtcactgaatatttcgtggcacgatggggtcacaacgtggc 52942876  T
Q  348 acgatgg 354  Q
    |||||||    
T  52942875 acgatgg 52942869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 22047135 - 22047055
Alignment:
Q  303 gcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 384  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||| | ||||||  || |||| |||||||||    
T  22047135 gcaaggcactggaaaaatc-tggcacgatgggatcgcatcgtggcacgatggtgtgctggcagggaaaaacagaaacatatt 22047055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 270 - 384
Target Start/End: Complemental strand, 619932 - 619818
Alignment:
Q  270 caacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaa 368  Q
    ||||||||||| || ||| ||||||||||| |||||||| || ||||    ||||||||||||||||||||| |||||||| |||||||| |||| || |    
T  619932 caacgtggcacaattggatgtttcagtttt-gaggcaagtcattggatttttcgtggcacgatggggtcgcaacgtggcacaatggtgcgctggcggcga 619834  T
Q  369 ataacataaacatatt 384  Q
    |||||| |||||||||    
T  619833 ataacagaaacatatt 619818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 321 - 384
Target Start/End: Complemental strand, 52942881 - 52942818
Alignment:
Q  321 cgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 384  Q
    ||||||||||||||||| || |||||||||||| |||| ||||||| |||||||||||||||||    
T  52942881 cgtggcacgatggggtcacaacgtggcacgatgatgcgctggcagcgaataacataaacatatt 52942818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 247 - 384
Target Start/End: Complemental strand, 40091923 - 40091786
Alignment:
Q  247 ataatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtg 345  Q
    |||||||||||||| |||   || ||||||||||||| |||| |||||||||| || | ||| || ||||||||||||| || |||||||||||| ||||    
T  40091923 ataatcgtggcacggtggttgggtaacgtggcacgattggagatttcagtttt-gaagtaagccattggaaaaatcgtgccatgatggggtcgcaacgtg 40091825  T
Q  346 gcacgatggtgcggtggcagcaaataacataaacatatt 384  Q
     |||||||||||  || |||| |||||| ||||| ||||    
T  40091824 acacgatggtgcactgacagcgaataacgtaaacgtatt 40091786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 269 - 384
Target Start/End: Original strand, 24878836 - 24878951
Alignment:
Q  269 gcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagca 367  Q
    ||||||||||||||| ||||||||||||||| || ||||| |||||||    ||||||||||||||| | ||| |||||||||||||| || ||||| |     
T  24878836 gcaacgtggcacgattggaggtttcagtttt-gacgcaagtcactggatttttcgtggcacgatgggattgcaacgtggcacgatggtacgctggcatcg 24878934  T
Q  368 aataacataaacatatt 384  Q
    ||||||| |||| ||||    
T  24878935 aataacagaaacgtatt 24878951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 249 - 299
Target Start/End: Complemental strand, 22048542 - 22048492
Alignment:
Q  249 aatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagttttt 299  Q
    |||||||||||||| | | ||||||||||||||||||||||||||||||||    
T  22048542 aatcgtggcacgattgaagggcaacgtggcacgatggaggtttcagttttt 22048492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 342 - 384
Target Start/End: Original strand, 47274647 - 47274689
Alignment:
Q  342 cgtggcacgatggtgcggtggcagcaaataacataaacatatt 384  Q
    ||||||||||||||||| ||||||| |||||||||||| ||||    
T  47274647 cgtggcacgatggtgcgatggcagcgaataacataaacgtatt 47274689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 358
Target Start/End: Complemental strand, 16689380 - 16689331
Alignment:
Q  309 cactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 358  Q
    |||||||||||||||| |||||||   ||||| |||||||||||||||||    
T  16689380 cactggaaaaatcgtgccacgatgaaatcgcaacgtggcacgatggtgcg 16689331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 310 - 358
Target Start/End: Original strand, 8529012 - 8529060
Alignment:
Q  310 actggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 358  Q
    ||||||||||||||| |||||||  | ||||||||| ||||||||||||    
T  8529012 actggaaaaatcgtgccacgatgaagccgcatcgtgccacgatggtgcg 8529060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 340 - 384
Target Start/End: Original strand, 11434873 - 11434917
Alignment:
Q  340 atcgtggcacgatggtgcggtggcagcaaataacataaacatatt 384  Q
    ||||||||||||||||||| ||||||| || |||| |||||||||    
T  11434873 atcgtggcacgatggtgcgctggcagcgaaaaacagaaacatatt 11434917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 340 - 384
Target Start/End: Complemental strand, 22801276 - 22801232
Alignment:
Q  340 atcgtggcacgatggtgcggtggcagcaaataacataaacatatt 384  Q
    |||||||||||||||||||  |||||||||||||| |||| ||||    
T  22801276 atcgtggcacgatggtgcgccggcagcaaataacagaaacgtatt 22801232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 127; Significance: 2e-65; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 21 - 215
Target Start/End: Original strand, 50767536 - 50767747
Alignment:
Q  21 gatagtgaaatatgaatgaatggaatgagatagatggtgcatttttaaattgtacagatgaaaacaaaagacaaatggaataaggacgaaatattcatga 120  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50767536 gataatgaaatatgaatgaatggaatgagatagatggtgcatttttaaattgtacagatgaaaacaaaagacaaatggaataaggacgaaatattcatga 50767635  T
Q  121 aaaata-----------------tcacaagggataccgtcataacatgttacattagtagnnnnnnngtaaattcacaaacatctttctctaactatata 203  Q
    ||||||                 ||||||||||||||||||||||||||||||||| |||       |||||||||||||||||||||||||||||||||    
T  50767636 aaaatatctctctcaggacgccttcacaagggataccgtcataacatgttacattactagtttttttgtaaattcacaaacatctttctctaactatata 50767735  T
Q  204 aaagttaattaa 215  Q
    ||||||||||||    
T  50767736 aaagttaattaa 50767747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 216 - 384
Target Start/End: Original strand, 20302198 - 20302367
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttt-tgaggcaaggcactgg 314  Q
    ||||||| ||||||| ||||||||||| |||| ||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  20302198 tgtgagagttaacttaaaatcagatttctgcagaatcgcggcatgatggcaaggcaacgtggcacgatggaggtttcagttttttgaggcaaggcactgg 20302297  T
Q  315 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 384  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |||| || ||||||| |||||||||    
T  20302298 aaaaattgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggcgaataacagaaacatatt 20302367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 216 - 384
Target Start/End: Original strand, 51752104 - 51752273
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttt-tgaggcaaggcactgg 314  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||||||   ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  51752104 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatggttgggcaacgtggcacgatggaggtttcagttttttgaggcaaggcactgg 51752203  T
Q  315 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 384  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||| || |||||||||||| ||||    
T  51752204 aaaaatcgtggcacgatggggccgcatcgtggcacgatggtgcgctggcggcgaataacataaacgtatt 51752273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 216 - 384
Target Start/End: Original strand, 13761577 - 13761745
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 315  Q
    ||||||| ||||||| ||||||| ||| |||| |||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||    
T  13761577 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatggctgggcaacgtggcatgatggaggtttcagtttttgaggcaaggcactgga 13761676  T
Q  316 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 384  Q
    |||||||||||||||||||||||||||| |||||||||||| | |||| || ||||||| |||| ||||    
T  13761677 aaaatcgtggcacgatggggtcgcatcgcggcacgatggtgtgctggcggcgaataacagaaacgtatt 13761745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 216 - 384
Target Start/End: Original strand, 51749778 - 51749947
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttt-tgaggcaaggcactgg 314  Q
    ||||||| ||||||| ||||||  ||| |||| ||||||||||||||||   |||||||||| |||||||||||||||||||| ||||||||||||||||    
T  51749778 tgtgagagttaacttaaaatcaagtttctgcagaatcgtggcacgatggttgggcaacgtggtacgatggaggtttcagttttttgaggcaaggcactgg 51749877  T
Q  315 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 384  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |||| || ||||||| |||| ||||    
T  51749878 aaaaatcgtggcacgatggggtcgcatcgtggcacgatagtgcgctggcggcgaataacagaaacgtatt 51749947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 244 - 384
Target Start/End: Original strand, 6823651 - 6823792
Alignment:
Q  244 tgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttt-tgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatc 342  Q
    |||| |||| |||||||||||   ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  6823651 tgcagaatcatggcacgatggttgggcaacgtggcacgatggaggtttcagttttttgaggcaaggcactggaaaaatcgtggcatgatggggtcgcatc 6823750  T
Q  343 gtggcacgatggtgcggtggcagcaaataacataaacatatt 384  Q
    |||||||||||||||| |||| || |||||||||||| ||||    
T  6823751 gtggcacgatggtgcgctggcggcgaataacataaacgtatt 6823792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 216 - 384
Target Start/End: Complemental strand, 10400369 - 10400201
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactgg 314  Q
    ||||||| ||||||| ||||||| ||| |||  |||||||||||||| ||  |||||||||||||||| ||||||||||  ||| ||||||| |||||||    
T  10400369 tgtgagagttaacttaaaatcaggtttctgcggaatcgtggcacgattgctgggcaacgtggcacgattggaggtttcaagttt-gaggcaaagcactgg 10400271  T
Q  315 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 384  Q
    ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  10400270 aaatatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcagcaaataacataaacgtatt 10400201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 224 - 363
Target Start/End: Original strand, 16225895 - 16226034
Alignment:
Q  224 ttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactggaaaaatcgt 323  Q
    ||||||| ||||||| ||| |||| ||||||||||||| ||   |||||||||||||||||||||||| |||||||  ||||||||||||||||||||||    
T  16225895 ttaacttaaaatcaggtttctgcagaatcgtggcacgacggttgggcaacgtggcacgatggaggttttagttttttgggcaaggcactggaaaaatcgt 16225994  T
Q  324 ggcacgatggggtcgcatcgtggcacgatggtgcggtggc 363  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  16225995 ggcacgatggggtcgcatcgtggcacgatggtgcgctggc 16226034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 216 - 358
Target Start/End: Original strand, 47179428 - 47179570
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 315  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||| |||  |||||||||||||||||||||||| |||||||  |||||||||||| |    
T  47179428 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttttagttttttgggcaaggcactgaa 47179527  T
Q  316 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 358  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  47179528 aaaatcgtggcacgatggggtctcatcgtggcacgatggtgcg 47179570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 249 - 384
Target Start/End: Original strand, 28840451 - 28840586
Alignment:
Q  249 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 347  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| ||||||||||| ||||||||||||| ||||||||||||    
T  28840451 aatcgtggcacgatggcaaggcaacgtggcacgattggaggtttcagttttt-aggcaaggtactggaaaaattgtggcacgatgggatcgcatcgtggc 28840549  T
Q  348 acgatggtgcggtggcagcaaataacataaacatatt 384  Q
    ||||||||| | ||||||| || |||| |||||||||    
T  28840550 acgatggtgtgctggcagcgaaaaacagaaacatatt 28840586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 216 - 363
Target Start/End: Original strand, 47177078 - 47177224
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 315  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||| | |  |||||||||||||||||||||||| |||||||| |||||| |||||||    
T  47177078 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgacgactgggcaacgtggcacgatggaggttttagtttttg-ggcaagacactgga 47177176  T
Q  316 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 363  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||    
T  47177177 aaaatcgtggcacgatggggtctcatcgtggcacgatggtgcgctggc 47177224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 249 - 384
Target Start/End: Original strand, 15823319 - 15823454
Alignment:
Q  249 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 347  Q
    |||||||||||||||||  |||||||||||||||| ||||||||||  ||| ||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  15823319 aatcgtggcacgatggctgggcaacgtggcacgattggaggtttcaagttt-gaggcaaagcactagaaaaatcgtggcacgatggggtcgcatcgtggc 15823417  T
Q  348 acgatggtgcggtggcagcaaataacataaacatatt 384  Q
    ||||||||||| | ||||||||||||| |||||||||    
T  15823418 acgatggtgcgctagcagcaaataacagaaacatatt 15823454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 249 - 384
Target Start/End: Original strand, 28842266 - 28842401
Alignment:
Q  249 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 347  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||    
T  28842266 aatcgtggcacgatggcaaggctacgtggcacgattggaggtttcagttttt-aggcaaggtactggaaaaatcgtggcacgatgggatcgcatcgtggc 28842364  T
Q  348 acgatggtgcggtggcagcaaataacataaacatatt 384  Q
    |||||||||   ||||||| || |||| |||||||||    
T  28842365 acgatggtgtcctggcagcgaaaaacagaaacatatt 28842401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 216 - 333
Target Start/End: Original strand, 6822775 - 6822893
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcag-tttttgaggcaaggcactgg 314  Q
    ||||||| ||||||| ||||||| ||| |||| |||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  6822775 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatggctgggcaacgtggcacgatggaggtttcagttttttgaggcaaggcactgg 6822874  T
Q  315 aaaaatcgtggcacgatgg 333  Q
    |||||||||||||||||||    
T  6822875 aaaaatcgtggcacgatgg 6822893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 216 - 354
Target Start/End: Original strand, 23783238 - 23783376
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 315  Q
    ||||||| ||||||| ||||||| ||| |||| |||||||||||||  ||  |||  || |||||||||||||||| |||||||  ||||||||||||||    
T  23783238 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacagctgggcttcgcggcacgatggaggttttagttttttgggcaaggcactgga 23783337  T
Q  316 aaaatcgtggcacgatggggtcgcatcgtggcacgatgg 354  Q
    |||||||||||||||||||||||||||||||||||||||    
T  23783338 aaaatcgtggcacgatggggtcgcatcgtggcacgatgg 23783376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 215 - 321
Target Start/End: Original strand, 20291279 - 20291386
Alignment:
Q  215 atgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcag-tttttgaggcaaggcactg 313  Q
    |||||||| ||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |||||||    
T  20291279 atgtgagagttaacttaaaatcagatttctgcagaatcgtggcacgatggcaaggcaacgtggcacggtggaggtttcagttttttgaggcatggcactg 20291378  T
Q  314 gaaaaatc 321  Q
    ||||||||    
T  20291379 gaaaaatc 20291386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 244 - 333
Target Start/End: Original strand, 16231369 - 16231458
Alignment:
Q  244 tgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatgg 333  Q
    |||| ||||||||||||| |||  |||||||||||||||||||||||| |||||||  |||||| |||||||||||||||||||||||||    
T  16231369 tgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttttagttttttgggcaagacactggaaaaatcgtggcacgatgg 16231458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 249 - 384
Target Start/End: Original strand, 13214854 - 13214989
Alignment:
Q  249 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 347  Q
    ||||||||||||||||   |||||||||||||||| ||||||||||||||| |||||||| |||||||    |||||||| |||||| | ||| ||||||    
T  13214854 aatcgtggcacgatggttgggcaacgtggcacgattggaggtttcagtttt-gaggcaagtcactggatttttcgtggcatgatgggattgcaacgtggc 13214952  T
Q  348 acgatggtgcggtggcagcaaataacataaacatatt 384  Q
    ||||||||| | ||||||||||||||| |||| ||||    
T  13214953 acgatggtgtgttggcagcaaataacaaaaacgtatt 13214989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 249 - 384
Target Start/End: Complemental strand, 3580126 - 3579991
Alignment:
Q  249 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 347  Q
    |||||||||||||| ||| ||||||||| ||| || ||| ||||||||| | |||||||| || |||||||||||||| ||| |||| | ||| ||||||    
T  3580126 aatcgtggcacgattgcagggcaacgtgacacaattggatgtttcagttat-gaggcaagtcattggaaaaatcgtggtacggtgggattgcaacgtggc 3580028  T
Q  348 acgatggtgcggtggcagcaaataacataaacatatt 384  Q
    ||||||||||| |||| || |||| ||||||| ||||    
T  3580027 acgatggtgcgctggcggcgaatatcataaacgtatt 3579991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 319 - 363
Target Start/End: Original strand, 23783362 - 23783406
Alignment:
Q  319 atcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 363  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  23783362 atcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggc 23783406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 273 - 384
Target Start/End: Original strand, 41646717 - 41646828
Alignment:
Q  273 cgtggcacgatg-gaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaata 371  Q
    |||||||||||  |||||||||||||| |||||||| |||||||    |||||||||| |||| | ||| ||||||||||||||||  ||||||| ||||    
T  41646717 cgtggcacgattagaggtttcagtttt-gaggcaagtcactggatttttcgtggcacggtgggattgcaacgtggcacgatggtgcactggcagcgaata 41646815  T
Q  372 acataaacatatt 384  Q
    ||| |||||||||    
T  41646816 acagaaacatatt 41646828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 216 - 298
Target Start/End: Original strand, 47451405 - 47451488
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgca-taatcgtggcacgatggcaaggcaacgtggcacga-tggaggtttcagtttt 298  Q
    ||||||| ||||||||||||||||||| ||||  |||||||||||||||||  ||||| ||||||||| ||||||||||||||||    
T  47451405 tgtgagagttaacttcaaatcagattt-tgcagaaatcgtggcacgatggctgggcaatgtggcacgattggaggtttcagtttt 47451488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 269 - 358
Target Start/End: Complemental strand, 30790882 - 30790793
Alignment:
Q  269 gcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 358  Q
    |||| |||||||||| ||| ||||||||| | || ||||| ||||||||||| |||||||||||||| |||||  ||||||||||||||||    
T  30790882 gcaatgtggcacgattggatgtttcagttat-gaagcaagtcactggaaaaaacgtggcacgatgggatcgcaatgtggcacgatggtgcg 30790793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 323 - 379
Target Start/End: Complemental strand, 28207500 - 28207444
Alignment:
Q  323 tggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaac 379  Q
    ||||||||||||||| || ||||||||||||||||| |||| || ||||||||||||    
T  28207500 tggcacgatggggtcacaacgtggcacgatggtgcgctggcggcgaataacataaac 28207444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 268 - 384
Target Start/End: Original strand, 39462310 - 39462426
Alignment:
Q  268 ggcaacgtggcacgatg-gaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagc 366  Q
    ||||||||||||||||  |||||||||||||| |||||||| || ||||    ||||||||||||||| | |||  |||||||||||||||| | ||||     
T  39462310 ggcaacgtggcacgattagaggtttcagtttt-gaggcaagtcagtggatttttcgtggcacgatgggattgcaatgtggcacgatggtgcgcttgcagt 39462408  T
Q  367 aaataacataaacatatt 384  Q
     ||||||| |||| ||||    
T  39462409 gaataacagaaacgtatt 39462426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 249 - 333
Target Start/End: Original strand, 49687334 - 49687418
Alignment:
Q  249 aatcgtggcacgatggcaaggcaacgtggcacga-tggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatgg 333  Q
    |||||||||| ||||||  ||||||||||||| | |||||||||||| |||||||||||| |||||||    ||||||||||||||    
T  49687334 aatcgtggcatgatggctgggcaacgtggcacaattggaggtttcag-ttttgaggcaagtcactggatttttcgtggcacgatgg 49687418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 298
Target Start/End: Complemental strand, 38925965 - 38925915
Alignment:
Q  249 aatcgtggcacgatggcaaggcaacgtggcacga-tggaggtttcagtttt 298  Q
    |||||||| ||||||||  ||||||||||||||| ||||||||||||||||    
T  38925965 aatcgtggtacgatggctgggcaacgtggcacgattggaggtttcagtttt 38925915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 358
Target Start/End: Complemental strand, 13449996 - 13449947
Alignment:
Q  309 cactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 358  Q
    |||||||||||||||| |||||| || ||| |||||| ||||||||||||    
T  13449996 cactggaaaaatcgtgccacgattggatcgaatcgtgccacgatggtgcg 13449947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 336 - 384
Target Start/End: Original strand, 47451508 - 47451556
Alignment:
Q  336 tcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 384  Q
    ||||||||||||||||||||||| || |||| ||||||| |||| ||||    
T  47451508 tcgcatcgtggcacgatggtgcgctgacagcgaataacagaaacgtatt 47451556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 121; Significance: 7e-62; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 224 - 384
Target Start/End: Complemental strand, 19502542 - 19502382
Alignment:
Q  224 ttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactggaaaaatcgt 323  Q
    ||||||| ||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  19502542 ttaacttaaaatcaggtttctgcagaatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagttttttaggcaaggcactggaaaaatcgt 19502443  T
Q  324 ggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 384  Q
    ||||||||||||||||||||||||||||||||||| ||||  | ||||||| |||||||||    
T  19502442 ggcacgatggggtcgcatcgtggcacgatggtgcgctggcgacgaataacagaaacatatt 19502382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 224 - 384
Target Start/End: Original strand, 27104523 - 27104683
Alignment:
Q  224 ttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactggaaaaatcgt 323  Q
    ||||||| ||||||||||| |||| |||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27104523 ttaacttaaaatcagatttctgcagaatcgtggcacgattgaagggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactggaaaaatcgt 27104622  T
Q  324 ggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 384  Q
    ||||||||||| ||||||||||||||||||||||| ||||||  || ||||||||||||||    
T  27104623 ggcacgatgggatcgcatcgtggcacgatggtgcgctggcagggaaaaacataaacatatt 27104683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 215 - 380
Target Start/End: Complemental strand, 19504885 - 19504720
Alignment:
Q  215 atgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgg 314  Q
    |||||| | ||||||| ||||||| |||  ||| |||| |||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||    
T  19504885 atgtgaaagttaacttaaaatcaggtttcagcagaatcatggcacgatggcaaggcaacgtggcacgatggaggttttaattttttaggcaaggcactgg 19504786  T
Q  315 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaaca 380  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||  | ||||||| |||||    
T  19504785 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcgacgaataacagaaaca 19504720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 216 - 363
Target Start/End: Complemental strand, 24162752 - 24162604
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagttttt-gaggcaaggcactgg 314  Q
    ||||||| ||||||| ||||||  ||| |||| ||||||||||| ||||   |||||||||||||||||||||||||||||||| |||||||||||||||    
T  24162752 tgtgagagttaacttaaaatcaagtttctgcagaatcgtggcacaatggttgggcaacgtggcacgatggaggtttcagttttttgaggcaaggcactgg 24162653  T
Q  315 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 363  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  24162652 aaaaatcgtggcacgatggggtcgcatcgtggcacgattgtgcgctggc 24162604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 216 - 363
Target Start/End: Complemental strand, 36559358 - 36559211
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 315  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||| |||  |||  || |||||||||||||||| |||||||  ||||||||||||||    
T  36559358 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacggctgggcttcgcggcacgatggaggttttagttttttgggcaaggcactgga 36559259  T
Q  316 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 363  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  36559258 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggc 36559211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 249 - 384
Target Start/End: Complemental strand, 21521201 - 21521066
Alignment:
Q  249 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 347  Q
    |||||||||||||||||  |||||||||||||||| ||||||||||||||| || ||||| |||||||||||||||| ||||||||| ||||| ||||||    
T  21521201 aatcgtggcacgatggctgggcaacgtggcacgattggaggtttcagtttt-gaagcaagccactggaaaaatcgtgccacgatgggatcgcaacgtggc 21521103  T
Q  348 acgatggtgcggtggcagcaaataacataaacatatt 384  Q
    ||||||||||| ||||||| |||||||||||| ||||    
T  21521102 acgatggtgcgctggcagcgaataacataaacgtatt 21521066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 216 - 354
Target Start/End: Complemental strand, 36561677 - 36561539
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 315  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||| |||  |||  |  |||||||||||||||| |||||||  ||||||||||||||    
T  36561677 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacggctgggcttcacggcacgatggaggttttagttttttgggcaaggcactgga 36561578  T
Q  316 aaaatcgtggcacgatggggtcgcatcgtggcacgatgg 354  Q
    |||||||||||||||||||||||||||||||||||||||    
T  36561577 aaaatcgtggcacgatggggtcgcatcgtggcacgatgg 36561539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 216 - 363
Target Start/End: Complemental strand, 45332675 - 45332528
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 315  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||| |||  |||  || |||||||||||||||| |||||||  ||||||| ||||||    
T  45332675 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcttcgcggcacgatggaggttttagttttttgggcaaggaactgga 45332576  T
Q  316 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 363  Q
    |||||||||| ||||||||||| |||||||||||||||||||| ||||    
T  45332575 aaaatcgtggaacgatggggtcacatcgtggcacgatggtgcgctggc 45332528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 249 - 384
Target Start/End: Original strand, 42064264 - 42064399
Alignment:
Q  249 aatcgtggcacgatggcaaggcaacgtggcacga-tggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 347  Q
    |||||||||||||| ||  |||||||||| |||| |||||||||||  ||| ||||||| ||||||||||||||||||||||||||| || |||||||||    
T  42064264 aatcgtggcacgattgctgggcaacgtggtacgactggaggtttcaagttt-gaggcaaagcactggaaaaatcgtggcacgatgggatcacatcgtggc 42064362  T
Q  348 acgatggtgcggtggcagcaaataacataaacatatt 384  Q
    ||||||||||| ||||||| || |||| |||||||||    
T  42064363 acgatggtgcgctggcagcgaaaaacagaaacatatt 42064399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 249 - 384
Target Start/End: Complemental strand, 6259321 - 6259186
Alignment:
Q  249 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 347  Q
    |||||||||||||||||   |||||||||||| || ||| ||||||||||| |||| ||| |||||||||||||||||||||||||| ||||| |||| |    
T  6259321 aatcgtggcacgatggctgtgcaacgtggcactattggatgtttcagtttt-gaggaaagtcactggaaaaatcgtggcacgatgggatcgcaacgtgac 6259223  T
Q  348 acgatggtgcggtggcagcaaataacataaacatatt 384  Q
    ||||||||||| |||| |  ||||||| |||||||||    
T  6259222 acgatggtgcgctggcggtgaataacagaaacatatt 6259186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 224 - 333
Target Start/End: Complemental strand, 43624077 - 43623968
Alignment:
Q  224 ttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcg 322  Q
    ||||||| ||||||| ||| |||| |||| ||||||||||||  |||||| ||||||||| ||||||||||||||| |||||||||||||| ||||||||    
T  43624077 ttaacttaaaatcaggtttctgcagaatcatggcacgatggctgggcaacatggcacgattggaggtttcagtttt-gaggcaaggcactgaaaaaatcg 43623979  T
Q  323 tggcacgatgg 333  Q
    |||||||||||    
T  43623978 tggcacgatgg 43623968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 308 - 384
Target Start/End: Complemental strand, 13910491 - 13910415
Alignment:
Q  308 gcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 384  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| || |||| |||||||||    
T  13910491 gcactggaaaaatcgtggcacgatggggtcgcattgtggcacgatggtgcgctggcagcgaaaaacagaaacatatt 13910415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 249 - 384
Target Start/End: Complemental strand, 22407915 - 22407780
Alignment:
Q  249 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 347  Q
    |||||||||||||| | | || ||| ||||||||| ||| ||||||||||| |||||||| || || |||||| ||||||||||||| || || ||||||    
T  22407915 aatcgtggcacgattgaagggtaacatggcacgattggatgtttcagtttt-gaggcaagtcagtgaaaaaattgtggcacgatgggatcacaacgtggc 22407817  T
Q  348 acgatggtgcggtggcagcaaataacataaacatatt 384  Q
    ||||||||||| ||||||| ||||||| |||| ||||    
T  22407816 acgatggtgcgttggcagcgaataacagaaacgtatt 22407780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 319 - 363
Target Start/End: Complemental strand, 36561532 - 36561488
Alignment:
Q  319 atcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 363  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  36561532 atcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggc 36561488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 268 - 333
Target Start/End: Complemental strand, 6264611 - 6264546
Alignment:
Q  268 ggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatgg 333  Q
    |||||||||||| ||| ||| ||||||||||| |||||||| |||||||||||||||||||||||||    
T  6264611 ggcaacgtggcatgattggatgtttcagtttt-gaggcaagtcactggaaaaatcgtggcacgatgg 6264546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 249 - 334
Target Start/End: Complemental strand, 40032553 - 40032468
Alignment:
Q  249 aatcgtggcacgatggcaaggcaacgtggcacga-tggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggg 334  Q
    |||||||||||||||||  ||||||||||||||| |||||||||||| ||||||| |||| |||||||    |||||||||||||||    
T  40032553 aatcgtggcacgatggctgggcaacgtggcacgattggaggtttcag-ttttgagacaagtcactggatttttcgtggcacgatggg 40032468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 340 - 384
Target Start/End: Complemental strand, 43623982 - 43623938
Alignment:
Q  340 atcgtggcacgatggtgcggtggcagcaaataacataaacatatt 384  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||    
T  43623982 atcgtggcacgatggtgcgctggcagcaaataacataaacgtatt 43623938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 319 - 354
Target Start/End: Complemental strand, 36561553 - 36561518
Alignment:
Q  319 atcgtggcacgatggggtcgcatcgtggcacgatgg 354  Q
    ||||||||||||||||||||||||||||||||||||    
T  36561553 atcgtggcacgatggggtcgcatcgtggcacgatgg 36561518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 109; Significance: 1e-54; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 216 - 384
Target Start/End: Complemental strand, 22114842 - 22114674
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 315  Q
    ||||||| ||||||| ||||||| ||| || | ||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  22114842 tgtgagagttaacttaaaatcaggtttctgtagaatcgtggcacgatggttgggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 22114743  T
Q  316 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 384  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |||| || ||||||| |||| ||||    
T  22114742 aaaattgtggcacgatggggtcgcatcgtggcacgatggtgcgatggcggcgaataacagaaacgtatt 22114674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 216 - 356
Target Start/End: Complemental strand, 6064006 - 6063866
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 315  Q
    ||||||| ||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||| |||||||  |||||||||||| |    
T  6064006 tgtgagaattaacttaaaatcaggtttatgcagaatcgtggcacgatggcaaggcaacgtggcacaatggaggttttagttttttgggcaaggcactgaa 6063907  T
Q  316 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtg 356  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  6063906 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtg 6063866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 216 - 363
Target Start/End: Complemental strand, 18099707 - 18099560
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactgg 314  Q
    ||||||| ||||||| ||||||| ||| |||| |||||||||||||||||  |||||||||||||||| ||||||||||||||| |||||||| ||||||    
T  18099707 tgtgagagttaacttaaaatcaggtttctgcaaaatcgtggcacgatggctgggcaacgtggcacgattggaggtttcagtttt-gaggcaagacactgg 18099609  T
Q  315 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 363  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18099608 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggc 18099560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 217 - 384
Target Start/End: Original strand, 5191374 - 5191541
Alignment:
Q  217 gtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactgga 315  Q
    |||||| ||||||| ||||||||||| |||| |||||||||||||| ||  |||| ||||||||||| ||||||||||||||| ||||||||| ||||||    
T  5191374 gtgagagttaacttaaaatcagatttctgcagaatcgtggcacgattgctgggcatcgtggcacgattggaggtttcagtttt-gaggcaaggtactgga 5191472  T
Q  316 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 384  Q
    ||||||||||||||||||| || |||||||||||||||||||| ||||||| || |||| |||||||||    
T  5191473 aaaatcgtggcacgatgggatctcatcgtggcacgatggtgcgctggcagcgaaaaacagaaacatatt 5191541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 215 - 363
Target Start/End: Original strand, 50493675 - 50493823
Alignment:
Q  215 atgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgg 314  Q
    |||||||| ||||||| ||||||| ||| |||| |||||||||||||| ||  |||||||||||||||||||||||| |||||||  |||||||||||||    
T  50493675 atgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatagctgggcaacgtggcacgatggaggttttagttttttgggcaaggcactgg 50493774  T
Q  315 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 363  Q
    ||||||||||||||||||| ||| |||||||||||||||||||| ||||    
T  50493775 aaaaatcgtggcacgatggagtctcatcgtggcacgatggtgcgctggc 50493823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 216 - 363
Target Start/End: Original strand, 38210067 - 38210214
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 315  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||| |||  |||||||||||||||||||||||| |||||||  ||||||||||||||    
T  38210067 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttttagttttttgggcaaggcactgga 38210166  T
Q  316 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 363  Q
    |||||||||||||||||||||| |||||||||||||| ||||| ||||    
T  38210167 aaaatcgtggcacgatggggtctcatcgtggcacgatagtgcgctggc 38210214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 232 - 345
Target Start/End: Complemental strand, 10192513 - 10192401
Alignment:
Q  232 aaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgat 331  Q
    |||||||||||||||  |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  10192513 aaatcagatttatgcggaatcgtggcacgatcgcaaggcaacgtggcacgatggaggtttcag-ttttgaggcaaggcactggaaaaatcgtggcacgat 10192415  T
Q  332 ggggtcgcatcgtg 345  Q
    ||| ||||||||||    
T  10192414 gggatcgcatcgtg 10192401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 216 - 357
Target Start/End: Complemental strand, 53896754 - 53896613
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 315  Q
    ||||||| ||||||| ||||||| ||| |||| |||||||||||||| ||  |||||||||||||||||||||||| |||||||  ||||||| ||||||    
T  53896754 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgattgctgggcaacgtggcacgatggaggttttagttttttgggcaaggtactgga 53896655  T
Q  316 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgc 357  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  53896654 aaaatcgtggcacgatggggtctcatcgtggcacgatggtgc 53896613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 233 - 365
Target Start/End: Original strand, 5899476 - 5899608
Alignment:
Q  233 aatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatg 332  Q
    |||||| ||| ||||||||| ||||||||| | | ||||||||||||||||||| |||| ||||||| ||||||||||||||||||||| ||||||||||    
T  5899476 aatcaggtttctgcataatcatggcacgattgaagggcaacgtggcacgatggatgttttagttttttaggcaaggcactggaaaaatcatggcacgatg 5899575  T
Q  333 gggtcgcatcgtggcacgatggtgcggtggcag 365  Q
    |||||||||||||||||||||||||| ||||||    
T  5899576 gggtcgcatcgtggcacgatggtgcgctggcag 5899608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 232 - 345
Target Start/End: Complemental strand, 10085593 - 10085481
Alignment:
Q  232 aaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgat 331  Q
    |||||||||||||||  |||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  10085593 aaatcagatttatgcggaatcgtggcatgatcgcaaggcaacgtggcacgatggaggtttcag-ttttgaggcaaggcactggaaaaatcgtggcacgat 10085495  T
Q  332 ggggtcgcatcgtg 345  Q
    ||| || |||||||    
T  10085494 gggatcacatcgtg 10085481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 275 - 384
Target Start/End: Complemental strand, 10956505 - 10956396
Alignment:
Q  275 tggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataac 373  Q
    ||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  10956505 tggcacgattggaggtttcagttttgg-ggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcagcgaataac 10956407  T
Q  374 ataaacatatt 384  Q
    |||||| ||||    
T  10956406 ataaacgtatt 10956396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 216 - 347
Target Start/End: Complemental strand, 18097422 - 18097291
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactgg 314  Q
    ||||||| ||||||| ||||||| ||| |||| |||||||||||||||||  |||||||||||||||| ||||||||||||||| |||||||||||  ||    
T  18097422 tgtgagagttaacttaaaatcaggtttctgcaaaatcgtggcacgatggctgggcaacgtggcacgattggaggtttcagtttt-gaggcaaggcatagg 18097324  T
Q  315 aaaaatcgtggcacgatggggtcgcatcgtggc 347  Q
    ||||||||||||||||||||||||||| |||||    
T  18097323 aaaaatcgtggcacgatggggtcgcatagtggc 18097291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 215 - 333
Target Start/End: Original strand, 38889756 - 38889875
Alignment:
Q  215 atgtgagatttaacttcaaatcagattta-tgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactg 313  Q
    |||||||| ||||||| |||| || |||  |||| |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||    
T  38889756 atgtgagagttaacttaaaattaggttttctgcagaatcgtggtacgatggcaaggcaacgtggcacgatggaggtttcagttttttaggcaaggcattg 38889855  T
Q  314 gaaaaatcgtggcacgatgg 333  Q
    ||||||||||||||||||||    
T  38889856 gaaaaatcgtggcacgatgg 38889875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 216 - 365
Target Start/End: Original strand, 5885983 - 5886133
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaa-cgtggcacgatggaggtttcagtttttgaggcaaggcactgg 314  Q
    ||||||| ||||||| |||| || ||| | || |||||||||||||| | |  |||| |||||||||||||| |||| ||||||| |||||||| |||||    
T  5885983 tgtgagagttaacttaaaattaggtttttacagaatcgtggcacgattgaagcgcaaacgtggcacgatggatgttttagttttttaggcaaggtactgg 5886082  T
Q  315 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcag 365  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  5886083 aaaaatcgtggcacgatggggtcgcatcgtggtacgatggtgcgctggcag 5886133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 273 - 365
Target Start/End: Original strand, 25388654 - 25388746
Alignment:
Q  273 cgtggcacgatggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcag 365  Q
    ||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  25388654 cgtggcacgatggaggttttagttttttgggcaaggcactggaaaaatcgtggcacgatggggtctcatcgtggcacgatggtgcgctggcag 25388746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 215 - 384
Target Start/End: Complemental strand, 32264581 - 32264412
Alignment:
Q  215 atgtgagatttaacttcaaatcagatttatgcataa-tcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcact 312  Q
    |||||||| ||||||| ||||||| ||| |||| || |||||||||||||||  || ||||||||||||| |||||||||||||||||||||||| ||||    
T  32264581 atgtgagagttaacttaaaatcaggttt-tgcagaaatcgtggcacgatggctggg-aacgtggcacgattggaggtttcagtttttgaggcaagtcact 32264484  T
Q  313 ggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 384  Q
    |||    ||||||||||||||| | ||| ||||||||||||||||| ||||||| ||||||| |||||||||    
T  32264483 ggatttttcgtggcacgatgggcttgcaacgtggcacgatggtgcgctggcagcgaataacagaaacatatt 32264412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 216 - 333
Target Start/End: Original strand, 35777163 - 35777280
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 315  Q
    ||||||| ||||||| |||| |||||| |||| |||||||||||||  ||  |||||||||||||||||||||||| |||||||  ||||||||||||||    
T  35777163 tgtgagagttaacttaaaattagatttctgcagaatcgtggcacgacagctgggcaacgtggcacgatggaggttttagttttttgggcaaggcactgga 35777262  T
Q  316 aaaatcgtggcacgatgg 333  Q
    ||||||||||||||||||    
T  35777263 aaaatcgtggcacgatgg 35777280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 249 - 384
Target Start/End: Original strand, 1321194 - 1321329
Alignment:
Q  249 aatcgtggcacgatggcaaggcaacgtggcacgatg-gaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 347  Q
    |||||||||||||| ||  ||||||||||||||||  |||||||||  ||| ||||||| |||||| |||||||||||||||||||||||||||||||||    
T  1321194 aatcgtggcacgattgctgggcaacgtggcacgattagaggtttcaagttt-gaggcaaagcactgaaaaaatcgtggcacgatggggtcgcatcgtggc 1321292  T
Q  348 acgatggtgcggtggcagcaaataacataaacatatt 384  Q
    ||||||||| | ||||||| || |||| |||||||||    
T  1321293 acgatggtgtgctggcagcgaaaaacagaaacatatt 1321329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 249 - 384
Target Start/End: Complemental strand, 5523119 - 5522984
Alignment:
Q  249 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 347  Q
    |||||||||| ||| ||  |||||| ||||||||| || |||||||||||| ||||||||| ||||||||||||||||||| ||||| ||||||||||||    
T  5523119 aatcgtggcaagattgctgggcaacatggcacgattggtggtttcagtttt-gaggcaaggtactggaaaaatcgtggcacaatgggatcgcatcgtggc 5523021  T
Q  348 acgatggtgcggtggcagcaaataacataaacatatt 384  Q
    ||||||||||| ||||||| || |||| |||||||||    
T  5523020 acgatggtgcgctggcagcgaaaaacagaaacatatt 5522984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 249 - 333
Target Start/End: Original strand, 11162924 - 11163008
Alignment:
Q  249 aatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatgg 333  Q
    |||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  11162924 aatcgtggcacgattgctgggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactggaaaaattgtggcacgatgg 11163008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 249 - 384
Target Start/End: Original strand, 26720301 - 26720436
Alignment:
Q  249 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 347  Q
    |||||||||||||||||   ||||||||||| ||| ||||||||||  ||| ||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  26720301 aatcgtggcacgatggctgagcaacgtggcaggattggaggtttcaagttt-gaggcaaagcactggaaaaatcgtggcacgatgggatcgcatcgtggc 26720399  T
Q  348 acgatggtgcggtggcagcaaataacataaacatatt 384  Q
    ||||||||| | ||||||| || |||| |||||||||    
T  26720400 acgatggtgtgctggcagcgaaaaacagaaacatatt 26720436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 309 - 384
Target Start/End: Complemental strand, 10958767 - 10958692
Alignment:
Q  309 cactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 384  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||| ||||    
T  10958767 cactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcagccaataacagaaacgtatt 10958692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 249 - 331
Target Start/End: Original strand, 11170178 - 11170260
Alignment:
Q  249 aatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgat 331  Q
    |||||||||||| | ||  ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  11170178 aatcgtggcacggttgctgggcaacgtggcacgatggaggtttcggtttttgaggcaaggcactggaaaaatcgtggctcgat 11170260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 216 - 333
Target Start/End: Complemental strand, 6719651 - 6719532
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgat---ggaggtttcagtttttgaggcaaggcact 312  Q
    ||||||| ||||||| ||||||| ||| ||| ||||||||||||||| | | |||| |||||||||||    ||||||||||||||| |||||| |||||    
T  6719651 tgtgagaattaacttaaaatcaggtttctgcttaatcgtggcacgattgaagggcatcgtggcacgattggagaggtttcagttttt-aggcaatgcact 6719553  T
Q  313 ggaaaaatcgtggcacgatgg 333  Q
    |||||||||||||||||||||    
T  6719552 ggaaaaatcgtggcacgatgg 6719532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 216 - 299
Target Start/End: Complemental strand, 7606963 - 7606880
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagttttt 299  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||| |||||||||  ||||||||||||||||||||||||||||||||    
T  7606963 tgtgagagttaacttaaaatcaggtttctgcagaatcgtgacacgatggctgggcaacgtggcacgatggaggtttcagttttt 7606880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 249 - 384
Target Start/End: Original strand, 24177032 - 24177167
Alignment:
Q  249 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 347  Q
    |||||||||||| | ||| |||||||||||||||| ||  ||||||||| | || ||||| |||||||||||  ||||||||||||| |||||  |||||    
T  24177032 aatcgtggcacgtttgcagggcaacgtggcacgattggttgtttcagttct-gaagcaagtcactggaaaaaatgtggcacgatgggatcgcaatgtggc 24177130  T
Q  348 acgatggtgcggtggcagcaaataacataaacatatt 384  Q
    ||||||||||| |||  || || ||||||||| ||||    
T  24177131 acgatggtgcgttggaggcgaaaaacataaacgtatt 24177167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 274 - 333
Target Start/End: Complemental strand, 6066254 - 6066195
Alignment:
Q  274 gtggcacgatggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatgg 333  Q
    |||||||||||||||||| |||||||  |||||||||||||||| |||||||||||||||    
T  6066254 gtggcacgatggaggttttagttttttgggcaaggcactggaaacatcgtggcacgatgg 6066195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 318 - 384
Target Start/End: Original strand, 3859350 - 3859416
Alignment:
Q  318 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 384  Q
    |||||||||||||||||||| |||||||||||||||||||| |||| || ||||| |||||| ||||    
T  3859350 aatcgtggcacgatggggtcacatcgtggcacgatggtgcgctggcggcgaataatataaacgtatt 3859416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 309 - 384
Target Start/End: Original strand, 45882752 - 45882827
Alignment:
Q  309 cactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 384  Q
    |||||||||||||||| ||||||||| | ||| ||||||||||||||||| || || | ||||||| |||| ||||    
T  45882752 cactggaaaaatcgtgccacgatgggattgcaacgtggcacgatggtgcgctgacaacgaataacagaaacctatt 45882827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 264
Target Start/End: Original strand, 3859315 - 3859365
Alignment:
Q  214 aatgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatgg 264  Q
    ||||||||| ||||||| ||||||| ||| |||||||||||||||||||||    
T  3859315 aatgtgagagttaacttaaaatcaggtttctgcataatcgtggcacgatgg 3859365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 340 - 384
Target Start/End: Original strand, 35777266 - 35777309
Alignment:
Q  340 atcgtggcacgatggtgcggtggcagcaaataacataaacatatt 384  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||    
T  35777266 atcgtggcacgatggtgcgctggcagcaaa-aacataaacatatt 35777309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 358
Target Start/End: Complemental strand, 4308725 - 4308676
Alignment:
Q  309 cactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 358  Q
    |||||||||||||||| |||||| || ||| |||||| ||||||||||||    
T  4308725 cactggaaaaatcgtgccacgattggatcgaatcgtgccacgatggtgcg 4308676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 384
Target Start/End: Complemental strand, 10084807 - 10084762
Alignment:
Q  339 catcgtggcacgatggtgcggtggcagcaaataacataaacatatt 384  Q
    |||||||||||||||||||| ||||||| || |||| |||||||||    
T  10084807 catcgtggcacgatggtgcgctggcagcgaaaaacagaaacatatt 10084762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 384
Target Start/End: Complemental strand, 10191727 - 10191682
Alignment:
Q  339 catcgtggcacgatggtgcggtggcagcaaataacataaacatatt 384  Q
    |||||||||||||||||||| ||||||| || |||| |||||||||    
T  10191727 catcgtggcacgatggtgcgctggcagcgaaaaacagaaacatatt 10191682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 340 - 384
Target Start/End: Complemental strand, 6719546 - 6719502
Alignment:
Q  340 atcgtggcacgatggtgcggtggcagcaaataacataaacatatt 384  Q
    ||||||||||||||||||| |||| || ||||||| |||||||||    
T  6719546 atcgtggcacgatggtgcgctggcggcgaataacagaaacatatt 6719502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 340 - 384
Target Start/End: Original strand, 38889861 - 38889905
Alignment:
Q  340 atcgtggcacgatggtgcggtggcagcaaataacataaacatatt 384  Q
    ||||||||||||||||||| |||| || ||||||| |||||||||    
T  38889861 atcgtggcacgatggtgcgctggcggcgaataacagaaacatatt 38889905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 104; Significance: 1e-51; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 216 - 363
Target Start/End: Complemental strand, 13054 - 12907
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 315  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||  ||||||||||||||    
T  13054 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatgtcaaggcaacgtggcacgatggaggttttagttttttgggcaaggcactgga 12955  T
Q  316 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 363  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||    
T  12954 aaaatcgtggcacgatggggtctcatcgtggcacgatggtgcgctggc 12907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 104; Significance: 1e-51; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 216 - 384
Target Start/End: Complemental strand, 14507716 - 14507546
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagt--ttttgaggcaaggcactg 313  Q
    ||||||| ||||||| ||||||||||| |||| |||||||||||||||||  ||||||||||||||||||||||||||||  ||||||  ||||||||||    
T  14507716 tgtgagagttaacttaaaatcagatttctgcagaatcgtggcacgatggctgggcaacgtggcacgatggaggtttcagtttttttgatacaaggcactg 14507617  T
Q  314 gaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 384  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| || |||| || |||| |||||||||    
T  14507616 gaaaaatggtggcacgatggggtcgcatcgtggcacgatggtgcgctgccagcgaaaaacagaaacatatt 14507546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 249 - 384
Target Start/End: Complemental strand, 19227915 - 19227780
Alignment:
Q  249 aatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggca 348  Q
    ||||||||||||||||   |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19227915 aatcgtggcacgatggttgggcaacgtggcatgatggaggtttcaatttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggca 19227816  T
Q  349 cgatggtgcggtggcagcaaataacataaacatatt 384  Q
    |||||||||| |||| || ||||||| |||||||||    
T  19227815 cgatggtgcgctggcggcgaataacagaaacatatt 19227780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 216 - 363
Target Start/End: Complemental strand, 26068882 - 26068735
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 315  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||| ||||||||||||||||| ||||||||||| |||||||  ||||||||||||||    
T  26068882 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgacggcaaggcaacgtggcatgatggaggttttagttttttgggcaaggcactgga 26068783  T
Q  316 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 363  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||    
T  26068782 aaaatcgtggcacgatggggtctcatcgtggcacgatggtgcgctggc 26068735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 249 - 384
Target Start/End: Original strand, 8995288 - 8995423
Alignment:
Q  249 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 347  Q
    |||||||||||||||||  |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  8995288 aatcgtggcacgatggctgggcaacgtggcacgattggaggtttcagtttttg-ggcaaggcactggaaaaatcgtggcacgatggggtcacatcgtggc 8995386  T
Q  348 acgatggtgcggtggcagcaaataacataaacatatt 384  Q
    ||||||||||| || |||||||||||| |||| ||||    
T  8995387 acgatggtgcgctgacagcaaataacagaaacgtatt 8995423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 249 - 384
Target Start/End: Original strand, 9019735 - 9019870
Alignment:
Q  249 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 347  Q
    |||||||||||||||||  |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  9019735 aatcgtggcacgatggctgggcaacgtggcacgattggaggtttcagtttttg-ggcaaggcactggaaaaatcgtggcacgatggggtcacatcgtggc 9019833  T
Q  348 acgatggtgcggtggcagcaaataacataaacatatt 384  Q
    ||||||||||| || |||||||||||| |||| ||||    
T  9019834 acgatggtgcgctgacagcaaataacagaaacgtatt 9019870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 216 - 363
Target Start/End: Complemental strand, 26066611 - 26066464
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 315  Q
    ||||||| ||||||| ||||||| ||| || | ||||||||||||| ||||||||||||||||||||||||||||| |||| ||  ||||||||||||||    
T  26066611 tgtgagagttaacttaaaatcaggtttctgtagaatcgtggcacgacggcaaggcaacgtggcacgatggaggttttagttatttgggcaaggcactgga 26066512  T
Q  316 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 363  Q
    |||||||||||||||||||||| ||||||||||| |||||||| ||||    
T  26066511 aaaatcgtggcacgatggggtctcatcgtggcacaatggtgcgctggc 26066464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 216 - 363
Target Start/End: Original strand, 33308685 - 33308832
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 315  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||| |||  |||  ||||||||||||||||||| |||||||  ||||||||||||||    
T  33308685 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcttcgtggcacgatggaggttttagttttttgggcaaggcactgga 33308784  T
Q  316 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 363  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  33308785 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggc 33308832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 216 - 363
Target Start/End: Original strand, 33310954 - 33311101
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 315  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||| |||  |||  ||||||||||||||||||| |||||||  ||||||||||||||    
T  33310954 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcttcgtggcacgatggaggttttagttttttgggcaaggcactgga 33311053  T
Q  316 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 363  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  33311054 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggc 33311101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 216 - 363
Target Start/End: Complemental strand, 29755279 - 29755132
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 315  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||| |||  |||  || |||||||||||||||| |||||||  ||||||||||||||    
T  29755279 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacggctgggcttcgcggcacgatggaggttttagttttttgggcaaggcactgga 29755180  T
Q  316 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 363  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  29755179 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggc 29755132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 224 - 384
Target Start/End: Complemental strand, 11983558 - 11983400
Alignment:
Q  224 ttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactggaaaaatcgt 323  Q
    ||||||| ||||||| ||| |||| |||||||| |||||||   |||||| ||| |||||||||||||||||| | |||| ||| |||||||||||||||    
T  11983558 ttaacttaaaatcaggtttctgcagaatcgtggtacgatggttgggcaacatggtacgatggaggtttcagttgt-gaggtaag-cactggaaaaatcgt 11983461  T
Q  324 ggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 384  Q
    ||||||||||||||||||||||||||||||||||| ||||||| || |||| |||||||||    
T  11983460 ggcacgatggggtcgcatcgtggcacgatggtgcgctggcagcgaaaaacagaaacatatt 11983400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 273 - 384
Target Start/End: Complemental strand, 4816749 - 4816639
Alignment:
Q  273 cgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaata 371  Q
    ||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||||| |    
T  4816749 cgtggcacgattggaggtttcagtttt-gaggcaaggtactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgtgctggtagcaaa-a 4816652  T
Q  372 acataaacatatt 384  Q
    ||| |||||||||    
T  4816651 acagaaacatatt 4816639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 249 - 365
Target Start/End: Complemental strand, 15530628 - 15530512
Alignment:
Q  249 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 347  Q
    |||||||||||||||||  || |||||||||| || ||||||||||  ||| ||||||| ||||| ||||| |||||| ||||||||| |||||||||||    
T  15530628 aatcgtggcacgatggctgggtaacgtggcacaattggaggtttcaagttt-gaggcaaagcactcgaaaattcgtggtacgatggggccgcatcgtggc 15530530  T
Q  348 acgatggtgcggtggcag 365  Q
    ||||||||| | ||||||    
T  15530529 acgatggtgtgctggcag 15530512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 299 - 384
Target Start/End: Complemental strand, 30729284 - 30729199
Alignment:
Q  299 tgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 384  Q
    ||||||||| |||||||||  ||||| |||||||||||| || ||||||||||| ||||| ||||||| ||||||| |||| ||||    
T  30729284 tgaggcaagtcactggaaatttcgtgccacgatggggtcacaacgtggcacgatagtgcgctggcagcgaataacagaaacgtatt 30729199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 309 - 358
Target Start/End: Original strand, 26084818 - 26084867
Alignment:
Q  309 cactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 358  Q
    |||||||||||||||| |||||| |  |||||||||||||||||||||||    
T  26084818 cactggaaaaatcgtgccacgattgaatcgcatcgtggcacgatggtgcg 26084867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 333
Target Start/End: Original strand, 32279845 - 32279910
Alignment:
Q  268 ggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatgg 333  Q
    |||||||||||||||| ||| ||||||||| | |||||||| | |||||||| ||||||||||||||    
T  32279845 ggcaacgtggcacgattggatgtttcagttct-gaggcaagtcgctggaaaagtcgtggcacgatgg 32279910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 384
Target Start/End: Complemental strand, 15541596 - 15541511
Alignment:
Q  299 tgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 384  Q
    ||||||| | |||||||||  || || ||||||| | ||||| |||||||||||||| || ||||||| |||| || |||||||||    
T  15541596 tgaggcacgtcactggaaatttcatgccacgatgagatcgcaacgtggcacgatggtacgctggcagcgaatagcagaaacatatt 15541511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 104; Significance: 1e-51; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 216 - 363
Target Start/End: Complemental strand, 34477632 - 34477485
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 315  Q
    ||||||| ||||||| ||||||  ||| |||| |||||||||||||||||  |||||||||||||||||||||||| ||||||| |||||||||||||||    
T  34477632 tgtgagagttaacttaaaatcaagtttctgcagaatcgtggcacgatggctgggcaacgtggcacgatggaggttttagttttttaggcaaggcactgga 34477533  T
Q  316 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 363  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  34477532 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggc 34477485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 249 - 384
Target Start/End: Original strand, 38881878 - 38882013
Alignment:
Q  249 aatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggca 348  Q
    |||||||||||||| ||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38881878 aatcgtggcacgattgctgggcaacgtggcacgatggaggttttagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggca 38881977  T
Q  349 cgatggtgcggtggcagcaaataacataaacatatt 384  Q
    |||||||||| |||| || ||||||| |||| ||||    
T  38881978 cgatggtgcgctggcggcgaataacagaaacgtatt 38882013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 216 - 333
Target Start/End: Original strand, 2174680 - 2174797
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 315  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  2174680 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagttttttaggcaaggcactgga 2174779  T
Q  316 aaaatcgtggcacgatgg 333  Q
    ||||||||||||||||||    
T  2174780 aaaatcgtggcacgatgg 2174797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 216 - 384
Target Start/End: Original strand, 31544798 - 31544966
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 315  Q
    ||||||| ||||||| ||||||| ||| |||| |||||||||||||| ||  |||||||||||||||||||||||| |||||||  ||||||||||||||    
T  31544798 tgtgagagttaacttaaaatcaggtttctgcaaaatcgtggcacgatagctgggcaacgtggcacgatggaggttttagttttttgggcaaggcactgga 31544897  T
Q  316 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 384  Q
    |||||||||||||||||||||| ||||| | |||||||||||| |||| |  || |||| |||||||||    
T  31544898 aaaatcgtggcacgatggggtctcatcgagacacgatggtgcgctggcggataaaaacagaaacatatt 31544966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 216 - 363
Target Start/End: Original strand, 10749505 - 10749652
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 315  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||| |||  |||  || |||||||||||||||| |||||||  ||||||||||||||    
T  10749505 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacggctgggcttcgcggcacgatggaggttttagttttttgggcaaggcactgga 10749604  T
Q  316 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 363  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  10749605 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggc 10749652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 224 - 365
Target Start/End: Original strand, 4236378 - 4236519
Alignment:
Q  224 ttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcg 322  Q
    ||||||| ||||||||||| |||| ||| |||||||||||||  |||||||||||||||| |||||||||||||||  ||||||||||||||||||||||    
T  4236378 ttaacttaaaatcagatttctgcagaattgtggcacgatggctgggcaacgtggcacgattggaggtttcagtttta-aggcaaggcactggaaaaatcg 4236476  T
Q  323 tggcacgatggggtcgcatcgtggcacgatggtgcggtggcag 365  Q
    |||||| ||||| ||||||||||||||||||||||| ||||||    
T  4236477 tggcacaatgggatcgcatcgtggcacgatggtgcgctggcag 4236519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 216 - 384
Target Start/End: Original strand, 31542442 - 31542610
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 315  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||| |||||| ||  |||||||||||||||||||||||| |||||||  ||||||||||||||    
T  31542442 tgtgagagttaacttaaaatcaggtttctgcaaaatcgtgacacgatagctgggcaacgtggcacgatggaggttttagttttttgggcaaggcactgga 31542541  T
Q  316 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 384  Q
    |||||||||||||||||||||| ||||| | |||||||||||| |||| |  || |||| |||||||||    
T  31542542 aaaatcgtggcacgatggggtctcatcgagacacgatggtgcgctggcggataaaaacagaaacatatt 31542610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 216 - 363
Target Start/End: Original strand, 10756960 - 10757107
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 315  Q
    ||||||| ||||||| ||||||| ||| |||| |||||| |||||| |||  |||  || |||||||||||||||| |||||||  ||||||||||||||    
T  10756960 tgtgagagttaacttaaaatcaggtttctgcacaatcgtagcacgacggctgggcttcgcggcacgatggaggttttagttttttgggcaaggcactgga 10757059  T
Q  316 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 363  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  10757060 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggc 10757107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 216 - 363
Target Start/End: Complemental strand, 15355065 - 15354918
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 315  Q
    ||||||| ||||||| ||||||| ||| |||| |||||||||||||  ||  |||  || |||||||||||||||| |||||||  ||||||||||||||    
T  15355065 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacagctgggcttcgcggcacgatggaggttttagttttttgggcaaggcactgga 15354966  T
Q  316 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 363  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  15354965 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggc 15354918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 216 - 363
Target Start/End: Complemental strand, 15357341 - 15357194
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 315  Q
    ||||||| ||||||| ||||||| ||| |||| |||||||||||||  ||  |||  || |||||||||||||||| |||||||  ||||||||||||||    
T  15357341 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacagctgggcttcgcggcacgatggaggttttagttttttgggcaaggcactgga 15357242  T
Q  316 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 363  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  15357241 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggc 15357194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 216 - 333
Target Start/End: Complemental strand, 34479972 - 34479855
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 315  Q
    ||||||| ||||||| ||||||| ||| |||| |||||||||||||||||  |||||||||||||||||||||||| ||||||| |||||||||||||||    
T  34479972 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatggctgggcaacgtggcacgatggaggttttagttttttaggcaaggcactgga 34479873  T
Q  316 aaaatcgtggcacgatgg 333  Q
    ||||||||||||||||||    
T  34479872 aaaatcgtggcacgatgg 34479855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 216 - 333
Target Start/End: Original strand, 39797849 - 39797966
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 315  Q
    ||||||| ||||||| ||||||| ||| ||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||||||||||| |||    
T  39797849 tgtgagagttaacttaaaatcaggtttctgcataatcgtggcacgatggctgggcaacgtggcatgatggaggtttcagtttttgaggcaaggcaccgga 39797948  T
Q  316 aaaatcgtggcacgatgg 333  Q
    |||||| |||||||||||    
T  39797949 aaaatcatggcacgatgg 39797966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 249 - 384
Target Start/End: Original strand, 16775930 - 16776065
Alignment:
Q  249 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 347  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||  ||| ||||||| |||||| |||||||||||||||||||||||||||||||||    
T  16775930 aatcgtggcacgatggcaaggcaacgtgacacgattggaggtttcaagttt-gaggcaaagcactgaaaaaatcgtggcacgatggggtcgcatcgtggc 16776028  T
Q  348 acgatggtgcggtggcagcaaataacataaacatatt 384  Q
    ||||||||||| ||||| | || |||| |||||||||    
T  16776029 acgatggtgcgctggcatcgaaaaacagaaacatatt 16776065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 215 - 333
Target Start/End: Complemental strand, 25921993 - 25921874
Alignment:
Q  215 atgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagt-ttttgaggcaaggcactg 313  Q
    |||||||| ||||||| ||||||| ||| |||| ||||||||||||||||   | |||||||||||||||||||||||||| ||||||||||||||||||    
T  25921993 atgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatggttggacaacgtggcacgatggaggtttcagttttttgaggcaaggcactg 25921894  T
Q  314 gaaaaatcgtggcacgatgg 333  Q
    ||||||||||||||||||||    
T  25921893 gaaaaatcgtggcacgatgg 25921874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 215 - 363
Target Start/End: Original strand, 23664833 - 23664981
Alignment:
Q  215 atgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgg 314  Q
    |||||||| ||||||| ||||||| ||| |||| |||||||||||||  ||  |||  || |||||||||||| ||| | |||||  || ||||||||||    
T  23664833 atgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacagctgggcttcgcggcacgatggagtttttatttttttgggaaaggcactgg 23664932  T
Q  315 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 363  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  23664933 aaaaatcgtggcacgatgggatcgcatcgtggcacgatggtgcgctggc 23664981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 215 - 363
Target Start/End: Complemental strand, 23793754 - 23793606
Alignment:
Q  215 atgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgg 314  Q
    |||||||| ||||||| ||||||| ||| |||| |||||||||||||  ||  |||  || |||||||||||| ||| | |||||  || ||||||||||    
T  23793754 atgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacagctgggcttcgcggcacgatggagtttttatttttttgggaaaggcactgg 23793655  T
Q  315 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 363  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  23793654 aaaaatcgtggcacgatgggatcgcatcgtggcacgatggtgcgctggc 23793606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 216 - 363
Target Start/End: Original strand, 23667109 - 23667256
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 315  Q
    ||||||| ||||||| ||||||| ||| |||| |||||||||||||  ||  |||  || |||||||||||| ||| | |||||  || |||||||||||    
T  23667109 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacagctgggcttcgcggcacgatggagtttttatttttttgggaaaggcactgga 23667208  T
Q  316 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 363  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  23667209 aaaatcgtggcacgatgggatcgcatcgtggcacgatggtgcgctggc 23667256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 273 - 363
Target Start/End: Complemental strand, 31179897 - 31179807
Alignment:
Q  273 cgtggcacgatggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 363  Q
    ||||||||||||||||||| |||||||  |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  31179897 cgtggcacgatggaggttttagttttttgggcaagacactggaaaaatcgtggcacgatggggtctcatcgtggcacgatggtgcgctggc 31179807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 307 - 384
Target Start/End: Complemental strand, 21684909 - 21684832
Alignment:
Q  307 ggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 384  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || |||| |||||||||    
T  21684909 ggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcagcgaaaaacagaaacatatt 21684832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 249 - 333
Target Start/End: Original strand, 659746 - 659829
Alignment:
Q  249 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatgg 333  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||||  |||||||| |||||||||||||||||||||||||    
T  659746 aatcgtggcacgatggctaggcaacgtggcacgattggaggtttcagttt--gaggcaagtcactggaaaaatcgtggcacgatgg 659829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 216 - 333
Target Start/End: Complemental strand, 38960604 - 38960487
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 315  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||| |||  |||   | |||||||||||||||| |||||||  ||||||||||||||    
T  38960604 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacggctgggctttgcggcacgatggaggttttagttttttgggcaaggcactgga 38960505  T
Q  316 aaaatcgtggcacgatgg 333  Q
    ||||||||||||||||||    
T  38960504 aaaatcgtggcacgatgg 38960487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 271 - 351
Target Start/End: Complemental strand, 659929 - 659850
Alignment:
Q  271 aacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacga 351  Q
    ||||||||||||| ||||||||||||||  |||||||| |||||||||||||||||||||||| |||||||| |||||||||    
T  659929 aacgtggcacgattggaggtttcagttt--gaggcaagtcactggaaaaatcgtggcacgatgaggtcgcattgtggcacga 659850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 249 - 384
Target Start/End: Original strand, 21947803 - 21947935
Alignment:
Q  249 aatcgtggcacgatggcaaggcaacgtggcacga-tggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 347  Q
    ||||||||||||||||| |||||||||| ||||| |||||||||||| |||||||| ||| |||||||     |||||||||||||| | ||| ||||||    
T  21947803 aatcgtggcacgatggctaggcaacgtgacacgattggaggtttcag-ttttgaggtaagtcactggactttacgtggcacgatgggattgcaacgtggc 21947901  T
Q  348 acgatggtgcggtggcagcaaataacataaacatatt 384  Q
    ||||||||   |||||||| ||||||| |||||||||    
T  21947902 acgatggt---gtggcagcgaataacagaaacatatt 21947935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 214 - 314
Target Start/End: Complemental strand, 18186589 - 18186489
Alignment:
Q  214 aatgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacga-tggaggtttcagtttttgaggcaaggcact 312  Q
    ||||||||| ||||||| ||||||  ||| |||| |||||||| ||||||||  ||||||||||||||| |||||||||||| |||||||||||| ||||    
T  18186589 aatgtgagagttaacttaaaatcaagtttctgcagaatcgtggtacgatggctgggcaacgtggcacgattggaggtttcag-ttttgaggcaagtcact 18186491  T
Q  313 gg 314  Q
    ||    
T  18186490 gg 18186489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 216 - 333
Target Start/End: Complemental strand, 31466496 - 31466379
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcat-aatcgtggcacgatggcaaggcaacgtggcacgatg-gaggtttcagtttttgaggcaaggcactg 313  Q
    ||||||| ||||||| ||||||| ||| ||||  |||||||||||||| | | ||||||||||||||||| || ||||||||| | |||||||| |||||    
T  31466496 tgtgagagttaacttaaaatcaggttt-tgcaggaatcgtggcacgattgaagggcaacgtggcacgatgagatgtttcagttat-gaggcaagtcactg 31466399  T
Q  314 gaaaaatcgtggcacgatgg 333  Q
    |||||||| |||||||||||    
T  31466398 gaaaaatcttggcacgatgg 31466379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 249 - 333
Target Start/End: Complemental strand, 2818813 - 2818729
Alignment:
Q  249 aatcgtggcacgatggcaaggcaacgtggcacga-tggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatgg 333  Q
    ||||||||||||||||| ||||||| |||||||| |||||||||||| |||||||||||| |||||||    ||||||||||||||    
T  2818813 aatcgtggcacgatggctaggcaacatggcacgattggaggtttcag-ttttgaggcaagtcactggatttttcgtggcacgatgg 2818729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 249 - 352
Target Start/End: Complemental strand, 20504419 - 20504316
Alignment:
Q  249 aatcgtggcacgatggcaaggcaacgtggcacga-tggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 347  Q
    |||||||||||||| ||  ||||||||||||||| ||||||||| || |||||||||||| || ||||    ||||||||||||||| | ||| ||||||    
T  20504419 aatcgtggcacgatagctgggcaacgtggcacgattggaggttttag-ttttgaggcaagtcaatggatttttcgtggcacgatgggattgcaacgtggc 20504321  T
Q  348 acgat 352  Q
    |||||    
T  20504320 acgat 20504316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 249 - 384
Target Start/End: Complemental strand, 20507968 - 20507833
Alignment:
Q  249 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 347  Q
    |||||||||||||| |   |||||||| ||||||| |||||||| |||||| |||||||| || ||||    ||||||||||||||| | ||| | ||||    
T  20507968 aatcgtggcacgatagttgggcaacgtagcacgattggaggttttagtttt-gaggcaagtcattggatttttcgtggcacgatgggattgcaacatggc 20507870  T
Q  348 acgatggtgcggtggcagcaaataacataaacatatt 384  Q
    |||| |||||| | ||||| ||||||| |||||||||    
T  20507869 acgaaggtgcgctagcagcgaataacagaaacatatt 20507833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 216 - 280
Target Start/End: Complemental strand, 21684969 - 21684905
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcac 280  Q
    ||||||| ||||||| ||||||| ||| |||| |||||||||||||||||  |||||||||||||    
T  21684969 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatggctgggcaacgtggcac 21684905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 216 - 314
Target Start/End: Complemental strand, 36402845 - 36402747
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacga-tggaggtttcagtttttgaggcaaggcactgg 314  Q
    ||||||| ||||||| |||| || ||| |||| ||||  |||||||||||  |||||| | |||||| |||||||||||| |||||||||||| ||||||    
T  36402845 tgtgagagttaacttaaaattaggtttctgcagaatctaggcacgatggctgggcaacatagcacgattggaggtttcag-ttttgaggcaagtcactgg 36402747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 358
Target Start/End: Original strand, 39854317 - 39854366
Alignment:
Q  309 cactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 358  Q
    |||||||||||||||| |||| | |  |||||||||||||||||||||||    
T  39854317 cactggaaaaatcgtgtcacggttgaatcgcatcgtggcacgatggtgcg 39854366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 358
Target Start/End: Original strand, 42238047 - 42238096
Alignment:
Q  309 cactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 358  Q
    |||||||||||||||| |||||||   ||||| |||||||||||||||||    
T  42238047 cactggaaaaatcgtgccacgatgaaatcgcaacgtggcacgatggtgcg 42238096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 309 - 357
Target Start/End: Original strand, 1240171 - 1240219
Alignment:
Q  309 cactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgc 357  Q
    |||||||||||||||| |||||| || ||| |||||| |||||||||||    
T  1240171 cactggaaaaatcgtgccacgattggatcgaatcgtgccacgatggtgc 1240219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 309 - 365
Target Start/End: Original strand, 4409890 - 4409946
Alignment:
Q  309 cactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcag 365  Q
    |||||||||||||||| ||| || || ||| |||||| |||||||||||| ||||||    
T  4409890 cactggaaaaatcgtgccacaattggatcgaatcgtgccacgatggtgcgatggcag 4409946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 332
Target Start/End: Complemental strand, 12556408 - 12556325
Alignment:
Q  249 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatg 332  Q
    ||||||||||  |||||  ||||||||||||| || ||||||||||||||| |||||||| |||||||    |||||||||||||    
T  12556408 aatcgtggcataatggctgggcaacgtggcacaattggaggtttcagtttt-gaggcaagtcactggatttttcgtggcacgatg 12556325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 216 - 264
Target Start/End: Complemental strand, 31179933 - 31179885
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatgg 264  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||||||    
T  31179933 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatgg 31179885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 344 - 384
Target Start/End: Original strand, 39797956 - 39797996
Alignment:
Q  344 tggcacgatggtgcggtggcagcaaataacataaacatatt 384  Q
    ||||||||||||||| ||||||| ||||||| |||||||||    
T  39797956 tggcacgatggtgcgctggcagcgaataacagaaacatatt 39797996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 100; Significance: 2e-49; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 216 - 363
Target Start/End: Original strand, 18812668 - 18812815
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 315  Q
    ||||||| ||||||| ||||||| ||| || | ||||||||||||| |||  |||||||||||||||||||||||| ||||||| |||||||||||||||    
T  18812668 tgtgagagttaacttaaaatcaggtttctgaagaatcgtggcacgacggctgggcaacgtggcacgatggaggttttagttttttaggcaaggcactgga 18812767  T
Q  316 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 363  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18812768 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggc 18812815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 216 - 363
Target Start/End: Original strand, 43079347 - 43079494
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 315  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||  ||||||||||||||    
T  43079347 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgacggcaaggcaacgtggcacgatggaggttttagttttttgggcaaggcactgga 43079446  T
Q  316 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 363  Q
    |||||||||| ||||||||||| |||||||||||||||||||| ||||    
T  43079447 aaaatcgtggtacgatggggtctcatcgtggcacgatggtgcgctggc 43079494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 216 - 355
Target Start/End: Original strand, 43081722 - 43081861
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 315  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||| |||||||||| |||||||||||||||||| |||||||  ||||||||||||||    
T  43081722 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgacggcaaggcaaagtggcacgatggaggttttagttttttgggcaaggcactgga 43081821  T
Q  316 aaaatcgtggcacgatggggtcgcatcgtggcacgatggt 355  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  43081822 aaaatcgtggcacgatggggtctcatcgtggcacgatggt 43081861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 249 - 384
Target Start/End: Original strand, 27826815 - 27826950
Alignment:
Q  249 aatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggca 348  Q
    |||||||||||||| ||  |||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||| |||||||||||||    
T  27826815 aatcgtggcacgattgctgggcaacgtggcacgatggaggtttcattttttgaagcaaagcactggaaaaatcgtggcacgatgggatcgcatcgtggca 27826914  T
Q  349 cgatggtgcggtggcagcaaataacataaacatatt 384  Q
    |||||||||| ||||||| || |||| |||||||||    
T  27826915 cgatggtgcgctggcagcgaaaaacaaaaacatatt 27826950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 249 - 384
Target Start/End: Original strand, 27829126 - 27829261
Alignment:
Q  249 aatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggca 348  Q
    |||||||||||||| ||  |||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||||||| |||||||||||||    
T  27829126 aatcgtggcacgattgctgggcaacgtggcacgatggaggtttcattttttgaggcaaaacactggaaaaatcgtggcacgatgggatcgcatcgtggca 27829225  T
Q  349 cgatggtgcggtggcagcaaataacataaacatatt 384  Q
    |||||||||| ||||||| || |||| |||||||||    
T  27829226 cgatggtgcgctggcagcgaaaaacaaaaacatatt 27829261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 249 - 384
Target Start/End: Complemental strand, 12517532 - 12517397
Alignment:
Q  249 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 347  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| | ||||||||||||||||||||||||| ||||||||||||    
T  12517532 aatcgtggcacgatggcaaggcaacgtggcacgattggaggtttcagtttt-gaggcaatgtactggaaaaatcgtggcacgatgggatcgcatcgtggc 12517434  T
Q  348 acgatggtgcggtggcagcaaataacataaacatatt 384  Q
    ||||||||| | ||||||| || |||| |||||||||    
T  12517433 acgatggtgtgctggcagcgaaaaacagaaacatatt 12517397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 216 - 363
Target Start/End: Original strand, 18810483 - 18810630
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 315  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||| |||  |||||||||||||||||||||||| | ||||| |||||||||||||||    
T  18810483 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttttatttttttaggcaaggcactgga 18810582  T
Q  316 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 363  Q
    ||||| | |||||||||||||| |||||||||||||||||||| ||||    
T  18810583 aaaattgcggcacgatggggtcacatcgtggcacgatggtgcgctggc 18810630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 216 - 384
Target Start/End: Original strand, 44720617 - 44720785
Alignment:
Q  216 tgtgagatttaacttcaaatcagattta-tgcataatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactg 313  Q
    ||||||| ||||||| ||||||| |||  |||| |||||||||| ||| ||  ||||  |||||||| | ||||||||||||||| ||||||||| ||||    
T  44720617 tgtgagagttaacttaaaatcaggttttctgcagaatcgtggcatgattgctgggcattgtggcacgtttggaggtttcagtttt-gaggcaaggtactg 44720715  T
Q  314 gaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 384  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||    
T  44720716 gaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcagcaaa-aacagaaacatatt 44720785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 224 - 384
Target Start/End: Original strand, 14807556 - 14807716
Alignment:
Q  224 ttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcg 322  Q
    ||||||| ||||||| ||| |||| |||||||||| |||||   ||||||||| |||||| ||||||||||  ||| ||||||| |||||||||||||||    
T  14807556 ttaacttaaaatcaggtttctgcagaatcgtggcatgatggttgggcaacgtgacacgattggaggtttcaagttt-gaggcaaagcactggaaaaatcg 14807654  T
Q  323 tggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 384  Q
    |||||||||||||||||||||||||||| ||||||| ||||||| || ||||||||| ||||    
T  14807655 tggcacgatggggtcgcatcgtggcacggtggtgcgctggcagcgaaaaacataaacgtatt 14807716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 224 - 384
Target Start/End: Original strand, 15067785 - 15067945
Alignment:
Q  224 ttaacttcaaatcagatttatgcat-aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatc 321  Q
    ||||||| ||||||||||| ||||  |||||||||| ||||||  |||||| ||||||||| ||||||||||||||| || ||||| |||||||||||||    
T  15067785 ttaacttaaaatcagattt-tgcaggaatcgtggcaagatggctgggcaacatggcacgattggaggtttcagtttt-gaagcaagccactggaaaaatc 15067882  T
Q  322 gtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 384  Q
     || ||||||||| ||||| ||||||||||||||||| ||||||| ||||||| |||| ||||    
T  15067883 atgccacgatgggatcgcaacgtggcacgatggtgcgctggcagcgaataacaaaaacgtatt 15067945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 249 - 354
Target Start/End: Complemental strand, 28252093 - 28251988
Alignment:
Q  249 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 347  Q
    ||||||||||||||||| ||||||||||| ||||| ||||||||||  ||| ||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  28252093 aatcgtggcacgatggctaggcaacgtggtacgattggaggtttcaagttt-gaggcaaagcactggaaaaatcgtggcacgatgggatcgcatcgtggc 28251995  T
Q  348 acgatgg 354  Q
    |||||||    
T  28251994 acgatgg 28251988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 216 - 384
Target Start/End: Original strand, 15072506 - 15072674
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcat-aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactg 313  Q
    ||||||| ||||||| ||||||||||  ||||  ||||||| |||||||||  ||||||||| |||||| ||||||||||||||| || ||||| ||||     
T  15072506 tgtgagagttaacttaaaatcagattc-tgcaggaatcgtgacacgatggctgggcaacgtgacacgattggaggtttcagtttt-gaagcaagccacta 15072603  T
Q  314 gaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 384  Q
    ||||||||||| ||||||||| ||||| ||||||| ||||||||| ||||||| ||||||| |||| ||||    
T  15072604 gaaaaatcgtgtcacgatgggatcgcaacgtggcatgatggtgcgctggcagcgaataacagaaacgtatt 15072674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 244 - 333
Target Start/End: Complemental strand, 3886412 - 3886322
Alignment:
Q  244 tgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagt-ttttgaggcaaggcactggaaaaatcgtggcacgatgg 333  Q
    |||| ||||||| || ||||||  | |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||    
T  3886412 tgcagaatcgtgacatgatggctggacaacgtggcacgatggaggtttcagttttttgaggcaagacactggaaaaatcgtggtacgatgg 3886322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 249 - 333
Target Start/End: Original strand, 4423868 - 4423952
Alignment:
Q  249 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatgg 333  Q
    ||||||||||| || ||  ||||||||||||| || |||||||||||||||  |||||||||||||||||||||||||||||||||    
T  4423868 aatcgtggcacaattgctgggcaacgtggcacaattggaggtttcagtttta-aggcaaggcactggaaaaatcgtggcacgatgg 4423952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 319 - 384
Target Start/End: Complemental strand, 28252002 - 28251937
Alignment:
Q  319 atcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 384  Q
    |||||||||||||||| ||||||||||| ||||||||||| ||||||| || |||| |||| ||||    
T  28252002 atcgtggcacgatgggatcgcatcgtggtacgatggtgcgttggcagcgaaaaacagaaacgtatt 28251937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 98; Significance: 4e-48; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 216 - 384
Target Start/End: Original strand, 3878322 - 3878490
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactgg 314  Q
    ||||||| ||||||| ||||||||||| |||| |||||||||||||||||  |||||||||||||||| ||||||||||  ||| ||||||| |||||||    
T  3878322 tgtgagagttaacttaaaatcagatttctgcagaatcgtggcacgatggctgggcaacgtggcacgattggaggtttcaagttt-gaggcaaagcactgg 3878420  T
Q  315 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 384  Q
    ||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||| |||| ||||    
T  3878421 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtacgctggcagcgaataacagaaacgtatt 3878490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 216 - 363
Target Start/End: Complemental strand, 1047503 - 1047356
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 315  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||| |||  |||||||||||||||||||||||| |||||||  ||||||||||||||    
T  1047503 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttttagttttttgggcaaggcactgga 1047404  T
Q  316 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 363  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||    
T  1047403 aaaatcgtggcacgatggggtctcatcgtggcacgatggtgcgctggc 1047356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 216 - 363
Target Start/End: Original strand, 2935070 - 2935217
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 315  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||| |||  |||  || |||||||||||||||| |||||||  ||||||||||||||    
T  2935070 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacggctgggcttcgcggcacgatggaggttttagttttttgggcaaggcactgga 2935169  T
Q  316 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 363  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  2935170 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggc 2935217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 216 - 363
Target Start/End: Complemental strand, 9027687 - 9027540
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 315  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||| |||  |||  || |||||||||||||||| |||||||  ||||||||||||||    
T  9027687 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacggctgggcttcgcggcacgatggaggttttagttttttgggcaaggcactgga 9027588  T
Q  316 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 363  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  9027587 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggc 9027540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 216 - 363
Target Start/End: Original strand, 22136878 - 22137025
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 315  Q
    ||||||| ||||||| ||||||| ||| |||| |||||||||||||  ||  |||  || |||||||||||||||| |||||||  ||||||||||||||    
T  22136878 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacagctgggcttcgcggcacgatggaggttttagttttttgggcaaggcactgga 22136977  T
Q  316 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 363  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22136978 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggc 22137025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 216 - 363
Target Start/End: Original strand, 40551905 - 40552052
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 315  Q
    ||||||| ||||||| ||||||| ||| |||| |||||||||||||  ||  |||  || |||||||||||||||| |||||||  ||||||||||||||    
T  40551905 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacagctgggcttcgcggcacgatggaggttttagttttttgggcaaggcactgga 40552004  T
Q  316 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 363  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  40552005 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggc 40552052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 215 - 384
Target Start/End: Complemental strand, 27306768 - 27306600
Alignment:
Q  215 atgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactg 313  Q
    |||||||| ||||||| |||| || ||| |||| |||||||||||||||||  | |||||||||||||| ||||||||||||||| |||||||| || ||    
T  27306768 atgtgagagttaacttaaaataaggttt-tgcaaaatcgtggcacgatggctggacaacgtggcacgattggaggtttcagtttt-gaggcaagtcattg 27306671  T
Q  314 gaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 384  Q
    |||||||||||||||||||||||||| |||||||||||||||||| | ||||| ||||||| |||| ||||    
T  27306670 gaaaaatcgtggcacgatggggtcgcttcgtggcacgatggtgcgctagcagcgaataacagaaacgtatt 27306600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 216 - 363
Target Start/End: Original strand, 22107867 - 22108014
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 315  Q
    ||||||| ||||||| ||||||| ||| |||| |||||||||||||  ||  |||  || ||||||||| |||||| |||||||  ||||||||||||||    
T  22107867 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacagctgggcttcgcggcacgatgcaggttttagttttttgggcaaggcactgga 22107966  T
Q  316 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 363  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22107967 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggc 22108014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 216 - 363
Target Start/End: Original strand, 40549627 - 40549774
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 315  Q
    ||||||| ||||||| ||||||| ||| |||| |||||||||||||  ||  |||  || ||||||||| |||||| |||||||  ||||||||||||||    
T  40549627 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacagctgggcttcgcggcacgatgcaggttttagttttttgggcaaggcactgga 40549726  T
Q  316 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 363  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  40549727 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggc 40549774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 216 - 333
Target Start/End: Complemental strand, 40837261 - 40837144
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 315  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||||||   | |||||||||||||||||||||||||||||| |||||||||||||||    
T  40837261 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatggtcggacaacgtggcacgatggaggtttcagttttttaggcaaggcactgga 40837162  T
Q  316 aaaatcgtggcacgatgg 333  Q
    ||||||||||||||||||    
T  40837161 aaaatcgtggcacgatgg 40837144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 249 - 384
Target Start/End: Original strand, 35412 - 35547
Alignment:
Q  249 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 347  Q
    |||||||||||||| || ||||||||||||||||| ||||||||||  ||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  35412 aatcgtggcacgattgctaggcaacgtggcacgattggaggtttcaagttt-gaggcaaagcactggaaaaatcgtggcacgatggggtcgcatcgtggc 35510  T
Q  348 acgatggtgcggtggcagcaaataacataaacatatt 384  Q
     |||| ||||| |||||||||||| || |||| ||||    
T  35511 ccgatcgtgcgctggcagcaaatagcagaaacgtatt 35547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 249 - 384
Target Start/End: Original strand, 44347 - 44482
Alignment:
Q  249 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 347  Q
    ||||||||||||||  |  ||||| |||||||||| ||||||||||  ||| || |||| |||||||||||||| |||||||||||||||||||||||||    
T  44347 aatcgtggcacgatttctgggcaatgtggcacgattggaggtttcaagttt-gacgcaaagcactggaaaaatcatggcacgatggggtcgcatcgtggc 44445  T
Q  348 acgatggtgcggtggcagcaaataacataaacatatt 384  Q
    ||||||||||| |||||||||||||||||||||||||    
T  44446 acgatggtgcgctggcagcaaataacataaacatatt 44482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 253 - 384
Target Start/End: Original strand, 25542317 - 25542448
Alignment:
Q  253 gtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacga 351  Q
    |||||||||| ||  |||||||||||||||| |||||||||||||||  |||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  25542317 gtggcacgattgctgggcaacgtggcacgattggaggtttcagtttta-aggcaaggcacttgaaaaatcgtggcacgatgggatcgcatcgtggcacga 25542415  T
Q  352 tggtgcggtggcagcaaataacataaacatatt 384  Q
    ||||||| ||||||| || |||| |||||||||    
T  25542416 tggtgcgctggcagcgaaaaacagaaacatatt 25542448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 216 - 333
Target Start/End: Original strand, 26804345 - 26804462
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactgg 314  Q
    ||||||| ||||||| ||||||| ||| | || |||||||||||||||||  |||||||||| ||||| ||||||||||||||| ||||||||||| |||    
T  26804345 tgtgagagttaacttaaaatcaggtttctacagaatcgtggcacgatggctgggcaacgtggtacgattggaggtttcagtttt-gaggcaaggcagtgg 26804443  T
Q  315 aaaaatcgtggcacgatgg 333  Q
    |||||||||||||||||||    
T  26804444 aaaaatcgtggcacgatgg 26804462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 249 - 384
Target Start/End: Original strand, 18567396 - 18567531
Alignment:
Q  249 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 347  Q
    |||||||||||||| ||  ||||| |||||||||| ||||||||||||||| |||||||| |||||||    |||||||||||||||||| || | ||||    
T  18567396 aatcgtggcacgatagctgggcaaagtggcacgattggaggtttcagtttt-gaggcaagtcactggatttttcgtggcacgatggggtcacaacttggc 18567494  T
Q  348 acgatggtgcggtggcagcaaataacataaacatatt 384  Q
    ||||||||||| ||||| | ||||||| |||| ||||    
T  18567495 acgatggtgcgctggcaacgaataacagaaacgtatt 18567531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 249 - 384
Target Start/End: Complemental strand, 31435553 - 31435418
Alignment:
Q  249 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 347  Q
    |||||||||||||| ||  ||||| |||||||||| ||||||||||||||| |||||||| |||||||    |||||||||||||||||| || | ||||    
T  31435553 aatcgtggcacgatagctgggcaaagtggcacgattggaggtttcagtttt-gaggcaagtcactggatttttcgtggcacgatggggtcacaacttggc 31435455  T
Q  348 acgatggtgcggtggcagcaaataacataaacatatt 384  Q
    ||||||||||| ||||| | ||||||| |||| ||||    
T  31435454 acgatggtgcgctggcaacgaataacagaaacgtatt 31435418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 249 - 330
Target Start/End: Complemental strand, 1049780 - 1049699
Alignment:
Q  249 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacga 330  Q
    |||||||||||||| ||  |||||||||||||||| ||||||||||||||| || |||||| |||||||||||||||||||||    
T  1049780 aatcgtggcacgattgctgggcaacgtggcacgattggaggtttcagtttt-gaagcaaggtactggaaaaatcgtggcacga 1049699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 340 - 384
Target Start/End: Original strand, 26804448 - 26804492
Alignment:
Q  340 atcgtggcacgatggtgcggtggcagcaaataacataaacatatt 384  Q
    ||||||||||||||||||| ||||||||||||||| |||| ||||    
T  26804448 atcgtggcacgatggtgcgctggcagcaaataacagaaacgtatt 26804492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 358
Target Start/End: Original strand, 40946167 - 40946216
Alignment:
Q  309 cactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 358  Q
    |||||||||||||||| |||||| || ||| |||||| ||||||||||||    
T  40946167 cactggaaaaatcgtgtcacgattggatcgaatcgtgccacgatggtgcg 40946216  T

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Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 42006404 - 42006484
Alignment:
Q  303 gcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 384  Q
    ||||| ||||| |||||||||||||||||||  ||| | |||||||||||||| | || | || ||||||||||||| ||||    
T  42006404 gcaagtcactgaaaaaatcgtggcacgatggaatcgtaacgtggcacgatggtac-gttgaaggaaataacataaacgtatt 42006484  T

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Target: scaffold0250 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 257 - 384
Target Start/End: Original strand, 2670 - 2797
Alignment:
Q  257 cacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggt 355  Q
    |||||| || ||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  2670 cacgattgctaggcaacgtggcacgattggaggtttcagtttt-gaggcaaggtactggaaaaatcgtggcacgatgggatcgcatcgtggcacgatggt 2768  T
Q  356 gcggtggcagcaaataacataaacatatt 384  Q
    ||| ||||||| |||||||||||| ||||    
T  2769 gcgctggcagcgaataacataaacgtatt 2797  T

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Target: scaffold0140 (Bit Score: 84; Significance: 8e-40; HSPs: 2)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 216 - 363
Target Start/End: Original strand, 21915 - 22062
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 315  Q
    ||||||| ||||||| ||||||| ||| |||| |||||||||||||  ||  |||  || |||||||||||||||| |||||||  ||||||||||||||    
T  21915 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacagctgggcttcgcggcacgatggaggttttagttttttgggcaaggcactgga 22014  T
Q  316 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 363  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22015 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggc 22062  T

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Target: scaffold0140; HSP #2
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 216 - 363
Target Start/End: Original strand, 24190 - 24337
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 315  Q
    ||||||| ||||||| ||||||| ||| |||| |||||||||||||  ||  |||  || |||||||||||||||| |||||||  ||||||||||||||    
T  24190 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacagctgggcttcgcggcacgatggaggttttagttttttgggcaaggcactgga 24289  T
Q  316 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 363  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  24290 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggc 24337  T

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Target: scaffold0025 (Bit Score: 82; Significance: 1e-38; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 224 - 384
Target Start/End: Complemental strand, 69825 - 69665
Alignment:
Q  224 ttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcg 322  Q
    ||||||| ||||||||||| |||| ||||||||||||||||| ||||||||||||||||| ||||||||||  ||| ||||||| |||||||||||||||    
T  69825 ttaacttaaaatcagatttctgcagaatcgtggcacgatggctaggcaacgtggcacgattggaggtttcaagttt-gaggcaaagcactggaaaaatcg 69727  T
Q  323 tggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 384  Q
    | |||| ||||| ||||||||| ||||||||||| | ||||||| || |||| |||||||||    
T  69726 tagcacaatgggatcgcatcgttgcacgatggtgtgctggcagcgaaaaacagaaacatatt 69665  T

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Target: scaffold0025; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 224 - 333
Target Start/End: Complemental strand, 73536 - 73427
Alignment:
Q  224 ttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacga-tggaggtttcagtttttgaggcaaggcactggaaaaatcg 322  Q
    ||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||   |||||||||| ||||||||||||| |    
T  73536 ttaacttaaaatcagatttatgcagaatcgtggcacgatggctaggcaacgtggcacgattggaggtttca-agtttgaggcaaagcactggaaaaattg 73438  T
Q  323 tggcacgatgg 333  Q
    |||||||||||    
T  73437 tggcacgatgg 73427  T

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Target: scaffold0472 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 216 - 363
Target Start/End: Original strand, 5927 - 6074
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 315  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||| |||  |||  || |||||||||||||||| ||||||| |||||||||||||||    
T  5927 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacggctgggcttcgcggcacgatggaggttttagttttttaggcaaggcactgga 6026  T
Q  316 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 363  Q
    |||||||||||| ||||||||| |||| ||||||||||||||| ||||    
T  6027 aaaatcgtggcatgatggggtctcatcatggcacgatggtgcgctggc 6074  T

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Target: scaffold0068 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 307 - 384
Target Start/End: Original strand, 29001 - 29078
Alignment:
Q  307 ggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 384  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || |||| |||||||||    
T  29001 ggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcagcgaaaaacagaaacatatt 29078  T

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Target: scaffold0068; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 216 - 280
Target Start/End: Original strand, 28941 - 29005
Alignment:
Q  216 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcac 280  Q
    ||||||| ||||||| ||||||| ||| |||| |||||||||||||||||  |||||||||||||    
T  28941 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatggctgggcaacgtggcac 29005  T

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Target: scaffold0131 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 217 - 384
Target Start/End: Original strand, 14768 - 14936
Alignment:
Q  217 gtgagatttaacttcaaatcagatttatgcat-aatcgtggcacgatggcaaggcaacgtggcacgatgg-aggtttcagtttttgaggcaaggcactgg 314  Q
    |||||| ||||||| |||||||  || ||||  |||||||||||||| | | |||||||||| ||||||| | ||||||||| | |||||||| ||||||    
T  14768 gtgagagttaacttaaaatcaggattctgcaggaatcgtggcacgattgaagggcaacgtggaacgatgggaagtttcagttat-gaggcaagtcactgg 14866  T
Q  315 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 384  Q
    |||  ||||||||||||||| || || |||| |||||||||||| ||||||| ||||||| |||||||||    
T  14867 aaatttcgtggcacgatgggatcacaacgtgacacgatggtgcgctggcagcgaataacagaaacatatt 14936  T

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Target: scaffold0339 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 342 - 384
Target Start/End: Original strand, 3872 - 3914
Alignment:
Q  342 cgtggcacgatggtgcggtggcagcaaataacataaacatatt 384  Q
    ||||||||||||||||| ||||||| |||||||||||| ||||    
T  3872 cgtggcacgatggtgcgatggcagcgaataacataaacgtatt 3914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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