View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10140A_low_516 (Length: 202)

Name: NF10140A_low_516
Description: NF10140A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10140A_low_516
NF10140A_low_516
[»] chr8 (36 HSPs)
chr8 (19-184)||(11251202-11251367)
chr8 (19-184)||(44493258-44493423)
chr8 (19-184)||(21967119-21967283)
chr8 (19-184)||(21979843-21980008)
chr8 (19-184)||(21984826-21984991)
chr8 (19-184)||(34950909-34951079)
chr8 (19-184)||(21329433-21329598)
chr8 (21-184)||(21999866-22000028)
chr8 (59-180)||(22996255-22996376)
chr8 (59-179)||(22252755-22252875)
chr8 (59-180)||(37516093-37516215)
chr8 (59-180)||(2418465-2418586)
chr8 (59-180)||(20501691-20501812)
chr8 (64-180)||(22525905-22526022)
chr8 (59-180)||(22963029-22963150)
chr8 (59-180)||(23668198-23668318)
chr8 (59-180)||(16799899-16800021)
chr8 (64-180)||(17085770-17085886)
chr8 (59-180)||(40492441-40492563)
chr8 (64-180)||(14102820-14102935)
chr8 (22-177)||(19929185-19929340)
chr8 (64-180)||(22419009-22419126)
chr8 (23-176)||(31722926-31723079)
chr8 (22-182)||(13661280-13661440)
chr8 (22-182)||(13719923-13720083)
chr8 (59-180)||(13507675-13507796)
chr8 (59-180)||(13597207-13597328)
chr8 (59-180)||(19154475-19154596)
chr8 (85-158)||(22385375-22385448)
chr8 (59-180)||(17266582-17266703)
chr8 (59-178)||(28397963-28398079)
chr8 (128-176)||(20879179-20879227)
chr8 (64-180)||(24353434-24353550)
chr8 (22-74)||(36727470-36727522)
chr8 (59-110)||(37116828-37116879)
chr8 (126-176)||(17218171-17218221)
[»] chr6 (24 HSPs)
chr6 (19-184)||(9621968-9622133)
chr6 (59-180)||(23527716-23527837)
chr6 (19-113)||(25738853-25738947)
chr6 (59-180)||(18204490-18204611)
chr6 (59-179)||(17229526-17229646)
chr6 (59-178)||(17106124-17106243)
chr6 (59-180)||(18177260-18177381)
chr6 (59-180)||(20224354-20224475)
chr6 (59-180)||(22118338-22118459)
chr6 (60-180)||(18453593-18453713)
chr6 (59-180)||(18199024-18199146)
chr6 (81-178)||(20137061-20137158)
chr6 (81-178)||(22195711-22195808)
chr6 (64-180)||(18696897-18697013)
chr6 (60-180)||(16245737-16245858)
chr6 (59-158)||(23539350-23539449)
chr6 (59-180)||(35008560-35008681)
chr6 (64-155)||(18706673-18706764)
chr6 (59-180)||(18895925-18896047)
chr6 (22-176)||(31732314-31732468)
chr6 (70-182)||(19023781-19023893)
chr6 (81-177)||(23077145-23077241)
chr6 (128-176)||(10445733-10445781)
chr6 (22-107)||(23501258-23501343)
[»] scaffold0301 (3 HSPs)
scaffold0301 (19-184)||(11740-11905)
scaffold0301 (19-184)||(14892-15057)
scaffold0301 (19-184)||(16140-16305)
[»] scaffold0016 (2 HSPs)
scaffold0016 (19-184)||(172485-172650)
scaffold0016 (59-180)||(119217-119338)
[»] scaffold0015 (1 HSPs)
scaffold0015 (19-184)||(209330-209494)
[»] scaffold0098 (2 HSPs)
scaffold0098 (22-184)||(24616-24779)
scaffold0098 (22-184)||(35486-35649)
[»] chr7 (18 HSPs)
chr7 (19-180)||(13892982-13893143)
chr7 (24-180)||(9725234-9725391)
chr7 (59-180)||(11768529-11768650)
chr7 (59-180)||(130404-130525)
chr7 (59-180)||(16996610-16996731)
chr7 (64-180)||(42462339-42462455)
chr7 (59-180)||(9032934-9033055)
chr7 (59-180)||(9177255-9177376)
chr7 (59-180)||(16092126-16092248)
chr7 (59-179)||(14045159-14045279)
chr7 (59-179)||(14355189-14355309)
chr7 (59-179)||(1867652-1867772)
chr7 (67-179)||(12901740-12901852)
chr7 (128-176)||(36301127-36301175)
chr7 (59-110)||(2529643-2529694)
chr7 (135-180)||(15202670-15202715)
chr7 (128-176)||(14219435-14219483)
chr7 (128-176)||(15096107-15096155)
[»] scaffold0001 (3 HSPs)
scaffold0001 (19-184)||(162649-162814)
scaffold0001 (59-180)||(497814-497935)
scaffold0001 (59-180)||(446883-447004)
[»] chr2 (13 HSPs)
chr2 (59-180)||(18546554-18546675)
chr2 (22-179)||(34137331-34137488)
chr2 (75-180)||(23287752-23287857)
chr2 (59-180)||(21243062-21243182)
chr2 (59-180)||(39827605-39827727)
chr2 (59-180)||(43946959-43947080)
chr2 (67-180)||(20519790-20519903)
chr2 (59-180)||(23005138-23005260)
chr2 (128-176)||(23799842-23799890)
chr2 (128-180)||(26392792-26392844)
chr2 (59-180)||(19672236-19672357)
chr2 (67-180)||(22412733-22412846)
chr2 (128-176)||(19646744-19646792)
[»] chr5 (16 HSPs)
chr5 (59-179)||(15796832-15796952)
chr5 (59-180)||(20572277-20572398)
chr5 (59-180)||(25574059-25574180)
chr5 (59-180)||(25575252-25575373)
chr5 (59-180)||(25576445-25576566)
chr5 (59-180)||(25744132-25744253)
chr5 (59-180)||(26740237-26740358)
chr5 (59-180)||(27988518-27988639)
chr5 (59-180)||(26732424-26732545)
chr5 (60-167)||(23475884-23475992)
chr5 (59-180)||(23470191-23470313)
chr5 (59-181)||(20026529-20026651)
chr5 (59-180)||(22177809-22177930)
chr5 (22-177)||(10953556-10953712)
chr5 (129-176)||(21503654-21503701)
chr5 (128-176)||(20469546-20469594)
[»] chr1 (17 HSPs)
chr1 (59-180)||(21533484-21533606)
chr1 (59-180)||(48520978-48521099)
chr1 (60-180)||(21042940-21043060)
chr1 (81-180)||(22124696-22124795)
chr1 (59-180)||(16381574-16381695)
chr1 (59-180)||(52940467-52940588)
chr1 (59-180)||(21683407-21683529)
chr1 (59-179)||(27652811-27652931)
chr1 (59-180)||(16367876-16367997)
chr1 (89-180)||(20346214-20346305)
chr1 (59-157)||(16093482-16093580)
chr1 (59-180)||(20958497-20958619)
chr1 (59-180)||(47191012-47191134)
chr1 (59-180)||(50613706-50613827)
chr1 (59-180)||(50621534-50621655)
chr1 (64-177)||(50687005-50687118)
chr1 (128-176)||(35893764-35893812)
[»] scaffold2080 (1 HSPs)
scaffold2080 (59-180)||(351-472)
[»] scaffold0074 (2 HSPs)
scaffold0074 (59-177)||(8574-8692)
scaffold0074 (59-173)||(2615-2729)
[»] chr4 (17 HSPs)
chr4 (24-180)||(13591501-13591658)
chr4 (59-175)||(152484-152600)
chr4 (59-180)||(15792185-15792306)
chr4 (59-180)||(32306585-32306706)
chr4 (59-180)||(40907462-40907583)
chr4 (59-180)||(26050085-26050206)
chr4 (59-179)||(14852464-14852584)
chr4 (59-177)||(16043426-16043544)
chr4 (22-180)||(27996302-27996460)
chr4 (83-180)||(14651091-14651188)
chr4 (59-180)||(26789748-26789869)
chr4 (22-172)||(50160558-50160709)
chr4 (128-176)||(10273138-10273186)
chr4 (128-176)||(14477174-14477222)
chr4 (128-180)||(19738637-19738689)
chr4 (85-180)||(15365535-15365630)
chr4 (128-168)||(9622034-9622074)
[»] chr3 (21 HSPs)
chr3 (59-180)||(37428104-37428225)
chr3 (86-184)||(16839288-16839386)
chr3 (81-180)||(15246431-15246530)
chr3 (81-180)||(15207349-15207448)
chr3 (65-178)||(9578014-9578127)
chr3 (59-180)||(23275075-23275196)
chr3 (81-180)||(15265552-15265651)
chr3 (59-180)||(32402568-32402691)
chr3 (59-180)||(316529-316651)
chr3 (19-91)||(16828707-16828779)
chr3 (59-180)||(605957-606078)
chr3 (64-180)||(23318333-23318448)
chr3 (59-180)||(23412839-23412961)
chr3 (128-176)||(6156489-6156537)
chr3 (128-175)||(21845903-21845950)
chr3 (130-176)||(25201651-25201697)
chr3 (128-174)||(48043967-48044013)
chr3 (128-176)||(12917802-12917850)
chr3 (128-176)||(15025552-15025600)
chr3 (128-172)||(45803816-45803860)
chr3 (128-176)||(48630961-48631009)
[»] scaffold0780 (1 HSPs)
scaffold0780 (59-180)||(2938-3059)
[»] scaffold0077 (1 HSPs)
scaffold0077 (59-180)||(55274-55395)
[»] scaffold0011 (1 HSPs)
scaffold0011 (59-180)||(37743-37864)
[»] scaffold0004 (1 HSPs)
scaffold0004 (59-180)||(332726-332847)
[»] scaffold1419 (1 HSPs)
scaffold1419 (59-180)||(433-554)
[»] scaffold0282 (1 HSPs)
scaffold0282 (59-176)||(17777-17894)
[»] scaffold0040 (2 HSPs)
scaffold0040 (59-180)||(13729-13850)
scaffold0040 (59-180)||(22606-22727)
[»] scaffold0054 (1 HSPs)
scaffold0054 (81-180)||(75460-75559)
[»] scaffold0914 (1 HSPs)
scaffold0914 (59-180)||(2115-2236)
[»] scaffold0750 (1 HSPs)
scaffold0750 (59-180)||(4006-4127)
[»] scaffold0108 (1 HSPs)
scaffold0108 (59-180)||(3566-3687)
[»] scaffold0106 (1 HSPs)
scaffold0106 (59-180)||(19257-19378)
[»] scaffold0347 (1 HSPs)
scaffold0347 (59-179)||(9299-9419)
[»] scaffold0485 (1 HSPs)
scaffold0485 (82-180)||(10539-10637)
[»] scaffold0293 (1 HSPs)
scaffold0293 (22-140)||(17933-18051)
[»] scaffold0014 (1 HSPs)
scaffold0014 (59-180)||(206114-206236)
[»] scaffold0010 (2 HSPs)
scaffold0010 (82-180)||(1027-1125)
scaffold0010 (67-180)||(60312-60425)
[»] scaffold0005 (1 HSPs)
scaffold0005 (83-180)||(166104-166201)
[»] scaffold0356 (1 HSPs)
scaffold0356 (64-180)||(257-372)
[»] scaffold0076 (1 HSPs)
scaffold0076 (59-180)||(24186-24308)
[»] scaffold0107 (1 HSPs)
scaffold0107 (59-175)||(13994-14111)
[»] scaffold0012 (1 HSPs)
scaffold0012 (59-180)||(220795-220916)
[»] scaffold0009 (1 HSPs)
scaffold0009 (59-180)||(85955-86076)
[»] scaffold0561 (1 HSPs)
scaffold0561 (128-180)||(10883-10935)
[»] scaffold0169 (1 HSPs)
scaffold0169 (128-180)||(29103-29155)
[»] scaffold0716 (2 HSPs)
scaffold0716 (128-179)||(1459-1510)
scaffold0716 (59-107)||(1602-1650)
[»] scaffold0601 (1 HSPs)
scaffold0601 (59-180)||(7064-7185)
[»] scaffold0500 (1 HSPs)
scaffold0500 (59-177)||(7941-8055)
[»] scaffold0357 (1 HSPs)
scaffold0357 (59-180)||(3104-3225)
[»] scaffold0073 (1 HSPs)
scaffold0073 (59-180)||(57258-57378)
[»] scaffold0022 (1 HSPs)
scaffold0022 (59-180)||(80672-80793)
[»] scaffold1403 (1 HSPs)
scaffold1403 (64-180)||(960-1075)
[»] scaffold0123 (1 HSPs)
scaffold0123 (59-179)||(25517-25637)
[»] scaffold0065 (2 HSPs)
scaffold0065 (128-180)||(55410-55462)
scaffold0065 (63-177)||(52993-53107)
[»] scaffold0035 (2 HSPs)
scaffold0035 (128-176)||(39575-39623)
scaffold0035 (128-176)||(44257-44305)
[»] scaffold0260 (1 HSPs)
scaffold0260 (89-180)||(8537-8628)
[»] scaffold0042 (1 HSPs)
scaffold0042 (22-176)||(28858-29012)
[»] scaffold0338 (1 HSPs)
scaffold0338 (59-180)||(11177-11298)
[»] scaffold0859 (2 HSPs)
scaffold0859 (23-107)||(4338-4422)
scaffold0859 (128-176)||(4263-4311)
[»] scaffold0285 (1 HSPs)
scaffold0285 (128-176)||(19295-19343)
[»] scaffold0139 (1 HSPs)
scaffold0139 (67-179)||(38708-38820)
[»] scaffold1551 (1 HSPs)
scaffold1551 (85-180)||(307-402)
[»] scaffold0109 (1 HSPs)
scaffold0109 (64-110)||(35541-35587)
[»] scaffold0003 (1 HSPs)
scaffold0003 (26-158)||(95887-96019)
[»] scaffold0002 (1 HSPs)
scaffold0002 (22-110)||(398145-398233)


Alignment Details
Target: chr8 (Bit Score: 142; Significance: 1e-74; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 19 - 184
Target Start/End: Original strand, 11251202 - 11251367
Alignment:
Q  19 catcatgattttgtgaattaacgtggttggtaaagtctttgatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaatt 118  Q
    |||| |||||||| |||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11251202 catcgtgattttgcgaattaacgttgttggtcaagtcttagatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaatt 11251301  T
Q  119 cattatggagaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgagagcaccctgat 184  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  11251302 cattatggagaagttaaaaatggaatttttgtgtgaaaaaggtgaagttcccgagagcaccctgat 11251367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 19 - 184
Target Start/End: Original strand, 44493258 - 44493423
Alignment:
Q  19 catcatgattttgtgaattaacgtggttggtaaagtctttgatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaatt 118  Q
    |||||||||||||| ||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44493258 catcatgattttgtaaattaacgttgttggtcaagtcttagatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaatt 44493357  T
Q  119 cattatggagaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgagagcaccctgat 184  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||    
T  44493358 cattatggagaagttaaaaatgggatttttgtgtggaaaaggtgaagttcctgagagcaccatgat 44493423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 19 - 184
Target Start/End: Original strand, 21967119 - 21967283
Alignment:
Q  19 catcatgattttgtgaattaacgtggttggtaaagtctttgatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaatt 118  Q
    |||||||||||||||||||||||| |||||| ||||| | |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  21967119 catcatgattttgtgaattaacgttgttggtcaagtcctagatggttttgagtgccggaatgtgtataagaatgattaggcag-tttttagaatgaaatt 21967217  T
Q  119 cattatggagaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgagagcaccctgat 184  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  21967218 cattatggagaagttaaaaatgggatttttgtgtgaaaaagttgaagttcccgagagcaccctgat 21967283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 19 - 184
Target Start/End: Original strand, 21979843 - 21980008
Alignment:
Q  19 catcatgattttgtgaattaacgtggttggtaaagtctttgatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaatt 118  Q
    |||||||||||||||||||||||| |||||| ||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  21979843 catcatgattttgtgaattaacgttgttggtcaagtcttagatggttttgagtgccggaatgtgtataagaatgattaggca-gtttttagaatgaaatt 21979941  T
Q  119 cattatggagaagttaaaaatggga-tttttgtgtgaaaaaggtgaagttcccgagagcaccctgat 184  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  21979942 cattatggagaagttaaaaatgagattttttgtgtgaaaaaggtgaagttcccgagagcaccctgat 21980008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 19 - 184
Target Start/End: Original strand, 21984826 - 21984991
Alignment:
Q  19 catcatgattttgtgaattaacgtggttggtaaagtctttgatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaatt 118  Q
    |||||||||||||||||||||||| |||||| ||||||| ||||||| |||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  21984826 catcatgattttgtgaattaacgttgttggtcaagtcttagatggttatgagtgccggaatgtgtataagaatgattaggca-gtttttagaatgaaatt 21984924  T
Q  119 cattatggagaagttaaaaatggga-tttttgtgtgaaaaaggtgaagttcccgagagcaccctgat 184  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  21984925 cattatggagaagttaaaaatgagattttttgtgtgaaaaaggtgaagttcccgagagcaccctgat 21984991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 19 - 184
Target Start/End: Complemental strand, 34951079 - 34950909
Alignment:
Q  19 catcatgattttgtgaattaacgtggttggtaaagtctttgatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaatt 118  Q
    |||||||||||| ||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  34951079 catcatgattttctgaattaacgttgttggtcaagtcttagatggttttgagtgccagaatgtgtataagaatgattaggcaagtttttagaatgaaatt 34950980  T
Q  119 cattatggagaagttaaaaatgggat-----ttttgtgtgaaaaaggtgaagttcccgagagcaccctgat 184  Q
    ||||||||||||||||||||||||||     ||||||||||||||||||||||||| ||| ||||||||||    
T  34950979 cattatggagaagttaaaaatgggattttttttttgtgtgaaaaaggtgaagttcctgagggcaccctgat 34950909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 19 - 184
Target Start/End: Complemental strand, 21329598 - 21329433
Alignment:
Q  19 catcatgattttgtgaattaacgtggttggtaaagtctttgatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaatt 118  Q
    ||||||||||||||||| ||| || |||||| ||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  21329598 catcatgattttgtgaaataatgttgttggtcaagtcttagatggttttgagtgccggaatgtgtataagaatgattaggcaagtttttagaatgaaatt 21329499  T
Q  119 cattatggagaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgagagcaccctgat 184  Q
    ||||| || ||||||||||||||||||||||||||||||| || ||||||| |||||||| |||||    
T  21329498 cattacggggaagttaaaaatgggatttttgtgtgaaaaatgtcaagttcctgagagcacgctgat 21329433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 21 - 184
Target Start/End: Original strand, 21999866 - 22000028
Alignment:
Q  21 tcatgattttgtgaattaacgtggttggtaaagtctttgatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattca 120  Q
    |||||||||||||||||||||  |||||| ||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  21999866 tcatgattttgtgaattaacgctgttggtcaagtcttagatggttttgagtgccggaatgtgtataagaatgattaggca-gtttttagaatgaaattca 21999964  T
Q  121 ttatggagaagttaaaaatggga-tttttgtgtgaaaaaggtgaagttcccgagagcaccctgat 184  Q
    || ||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||    
T  21999965 tt-tggagaagttaaaaatgagattttttgtgtgaaaaaggtgaagttccagagagcaccctgat 22000028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 59 - 180
Target Start/End: Complemental strand, 22996376 - 22996255
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||| ||||||||||| |||| |||||||||||||||||||| ||||||||| ||| ||| |  ||||  ||||||||||||||||||||| ||||||||    
T  22996376 gatgattttgagtgcctgaatatgtataagaatgattaggcaagtttttagattgagattgaacatgggaaagttaaaaatgggatttttgggtgaaaaa 22996277  T
Q  159 ggtgaagttcccgagagcaccc 180  Q
     || ||||||||||||||||||    
T  22996276 tgtcaagttcccgagagcaccc 22996255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 59 - 179
Target Start/End: Original strand, 22252755 - 22252875
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    ||||||||||||||||  ||  |||||||||||||||||||| ||||||||| ||||||  |  ||   |||||||||||||||||||||| ||||||||    
T  22252755 gatggttttgagtgccttaacatgtataagaatgattaggcaagtttttagattgaaatggaacatatggaagttaaaaatgggatttttgggtgaaaaa 22252854  T
Q  159 ggtgaagttcccgagagcacc 179  Q
     || |||||||||||||||||    
T  22252855 tgtcaagttcccgagagcacc 22252875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 59 - 180
Target Start/End: Complemental strand, 37516215 - 37516093
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaa-ttcattatggagaagttaaaaatgggatttttgtgtgaaaa 157  Q
    ||||||||||||||||  ||| | |||||||||||||||||| ||||||||| ||||| || |   ||||||||||||||||| |||||||  |||||||    
T  37516215 gatggttttgagtgccttaatatttataagaatgattaggcaagtttttagattgaaaattgaacctggagaagttaaaaatgagatttttaggtgaaaa 37516116  T
Q  158 aggtgaagttcccgagagcaccc 180  Q
    | || ||||||||||||||||||    
T  37516115 atgtcaagttcccgagagcaccc 37516093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 59 - 180
Target Start/End: Original strand, 2418465 - 2418586
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||||||||||||||| |||| |||||||||||||||||||| ||||||||| ||||||| |   |||  ||||||||||||  ||||||| ||||||||    
T  2418465 gatggttttgagtgcctgaatatgtataagaatgattaggcaagtttttagattgaaattgaacctgggaaagttaaaaatgatatttttgggtgaaaaa 2418564  T
Q  159 ggtgaagttcccgagagcaccc 180  Q
     || || || ||||||||||||    
T  2418565 tgtcaaatttccgagagcaccc 2418586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 59 - 180
Target Start/End: Original strand, 20501691 - 20501812
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||||||||| ||||| |||  |||||||||||||||||||| ||||||||| ||||||| |  |||| ||| ||||||| |||||||||| ||||||||    
T  20501691 gatggttttgggtgcctgaacatgtataagaatgattaggcaagtttttagattgaaattgaacatggggaaattaaaaacgggatttttgggtgaaaaa 20501790  T
Q  159 ggtgaagttcccgagagcaccc 180  Q
     || || |||| ||||||||||    
T  20501791 tgtcaaattcctgagagcaccc 20501812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 64 - 180
Target Start/End: Complemental strand, 22526022 - 22525905
Alignment:
Q  64 ttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaag-ttaaaaatgggatttttgtgtgaaaaaggtg 162  Q
    ||||||||| | |||| |||||||||||||||||||| ||| ||||| ||||||| |   |||  ||| |||||||||||||||||| |||||||| ||     
T  22526022 ttttgagtgtctgaatatgtataagaatgattaggcaagttgttagattgaaattgaacctgggaaagtttaaaaatgggatttttgggtgaaaaatgtc 22525923  T
Q  163 aagttcccgagagcaccc 180  Q
    ||||||||||||||||||    
T  22525922 aagttcccgagagcaccc 22525905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 59 - 180
Target Start/End: Original strand, 22963029 - 22963150
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||||||||| ||||  |||  |||||||||||||||||||| || |||||| ||||||| |   ||| || |||||||||| |||||||| ||||||||    
T  22963029 gatggttttgggtgcatgaacatgtataagaatgattaggcaagtctttagattgaaattgaacctggggatgttaaaaatgagatttttgggtgaaaaa 22963128  T
Q  159 ggtgaagttcccgagagcaccc 180  Q
     || ||||||||||||||||||    
T  22963129 tgtcaagttcccgagagcaccc 22963150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 59 - 180
Target Start/End: Complemental strand, 23668318 - 23668198
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||| ||||||||||  |||  ||||||| |||||||||||| |||||| || ||||||| |   ||| |||||||||||||||||||||| ||||||||    
T  23668318 gatgattttgagtgcatgaacatgtataaaaatgattaggcaagtttttggattgaaattgaacctgg-gaagttaaaaatgggatttttgggtgaaaaa 23668220  T
Q  159 ggtgaagttcccgagagcaccc 180  Q
     || ||||||||||||||||||    
T  23668219 tgtcaagttcccgagagcaccc 23668198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 59 - 180
Target Start/End: Complemental strand, 16800021 - 16799899
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaag--ttaaaaatgggatttttgtgtgaaa 156  Q
    |||| ||||||||||| |||| |||||||||||||||||||||||||||||| ||| ||| |  ||||  |||  |||||||| ||||||||| ||||||    
T  16800021 gatgtttttgagtgcctgaatatgtataagaatgattaggcaggtttttagattgagattgaacatgggaaagttttaaaaat-ggatttttgggtgaaa 16799923  T
Q  157 aaggtgaagttcccgagagcaccc 180  Q
    || || || |||||||||||||||    
T  16799922 aatgtcaaattcccgagagcaccc 16799899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 64 - 180
Target Start/End: Original strand, 17085770 - 17085886
Alignment:
Q  64 ttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaaggtga 163  Q
    ||||||||||| |||  ||||||| |||||||||||| || |||||| | ||||| |  |||| ||||||||||||| |||||||| |||||||| || |    
T  17085770 ttttgagtgcctgaacatgtataataatgattaggcaagtctttagattaaaattgaacatggggaagttaaaaatgagatttttgggtgaaaaatgtca 17085869  T
Q  164 agttcccgagagcaccc 180  Q
    |||| ||||||||||||    
T  17085870 agtttccgagagcaccc 17085886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 59 - 180
Target Start/End: Original strand, 40492441 - 40492563
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattat-ggagaagttaaaaatgggatttttgtgtgaaaa 157  Q
    |||| ||||||||||| |||| |||||||||||||||||||| ||||||||| ||| ||| |   | ||| |  ||||||||| |||||||| |||||||    
T  40492441 gatgattttgagtgcctgaatatgtataagaatgattaggcaagtttttagattgagattgaacctcggaaagtttaaaaatgagatttttgggtgaaaa 40492540  T
Q  158 aggtgaagttcccgagagcaccc 180  Q
    | || ||||||||||||||||||    
T  40492541 atgtcaagttcccgagagcaccc 40492563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 64 - 180
Target Start/End: Original strand, 14102820 - 14102935
Alignment:
Q  64 ttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaaggtga 163  Q
    ||||||||||| | || ||||||  |||||||||||| ||||| ||| ||| ||| |  |||  |||||||||||||||||||||| |||||||| || |    
T  14102820 ttttgagtgcctggatatgtatattaatgattaggcaagtttt-agattgagattgaacatgaggaagttaaaaatgggatttttgggtgaaaaatgtca 14102918  T
Q  164 agttcccgagagcaccc 180  Q
    |||||||||||||||||    
T  14102919 agttcccgagagcaccc 14102935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 22 - 177
Target Start/End: Original strand, 19929185 - 19929340
Alignment:
Q  22 catgattttgtgaattaacgtggttggtaaagtctttgatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcat 121  Q
    |||||||| |||| ||||| |  | ||| |||| || |||||||||||||||| |||  | ||||| ||||| |||| | ||||||||| |||||||       
T  19929185 catgatttcgtgatttaaccttttgggtcaagtattagatggttttgagtgcctgaacatttataaaaatgaataggaaagtttttagattgaaattgga 19929284  T
Q  122 tatggagaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgagagca 177  Q
      | | |||||||||||||||||||||| |||||||| || |||||||||||||||    
T  19929285 cgttgggaagttaaaaatgggatttttgggtgaaaaatgtcaagttcccgagagca 19929340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 64 - 180
Target Start/End: Original strand, 22419009 - 22419126
Alignment:
Q  64 ttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaa-attcattatggagaagttaaaaatgggatttttgtgtgaaaaaggtg 162  Q
    |||||||||||  ||| | |||||||||||||||  | ||||||||| |||| ||| |  |||| |||||||||||||||||||||| |||||||| ||     
T  22419009 ttttgagtgcctaaatatttataagaatgattagttaagtttttagattgaagattgaacatggggaagttaaaaatgggatttttgggtgaaaaatgtc 22419108  T
Q  163 aagttcccgagagcaccc 180  Q
    || ||||||| |||||||    
T  22419109 aaattcccgaaagcaccc 22419126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 23 - 176
Target Start/End: Original strand, 31722926 - 31723079
Alignment:
Q  23 atgattttgtgaattaacgtggttggtaaagtctttgatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcatt 122  Q
    ||||||||||||||||||||  | ||| |||| || ||||||||||||||||  ||| ||| ||  |||||||||||| |||||| ||   || ||        
T  31722926 atgattttgtgaattaacgttttgggtcaagttttagatggttttgagtgccttaatatgtttagaaatgattaggcaagtttttggatcaaatttgggc 31723025  T
Q  123 atggagaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgagagc 176  Q
    || | |||||||||||||||||||||| |||||||| || || |||||||||||    
T  31723026 atagggaagttaaaaatgggatttttgagtgaaaaatgtcaatttcccgagagc 31723079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 182
Target Start/End: Original strand, 13661280 - 13661440
Alignment:
Q  22 catgattttgtgaattaacgtggttggtaaagtctttgatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcat 121  Q
    ||||||||||||||||||| |  | |||  |||  | ||||||||||||||||  ||  |||||||||||||||||||| |||||| ||    ||||       
T  13661280 catgattttgtgaattaaccttttgggtcgagttatagatggttttgagtgccttaacatgtataagaatgattaggcaagtttttggatcagaattgga 13661379  T
Q  122 tatggagaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgagagcaccctg 182  Q
      | | |||||| ||||||||||||||| |||||||| || ||||||||||||||||||||    
T  13661380 cgtagggaagtttaaaatgggatttttgggtgaaaaatgtcaagttcccgagagcaccctg 13661440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 182
Target Start/End: Original strand, 13719923 - 13720083
Alignment:
Q  22 catgattttgtgaattaacgtggttggtaaagtctttgatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcat 121  Q
    ||||||||||||||||||| |  | |||  |||  | ||||||||||||||||  ||  |||||||||||||||||||| |||||| ||    ||||       
T  13719923 catgattttgtgaattaaccttttgggtcgagttatagatggttttgagtgccttaacatgtataagaatgattaggcaagtttttggatcagaattgga 13720022  T
Q  122 tatggagaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgagagcaccctg 182  Q
      | | |||||| ||||||||||||||| |||||||| || ||||||||||||||||||||    
T  13720023 cgtagggaagtttaaaatgggatttttgggtgaaaaatgtcaagttcccgagagcaccctg 13720083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 180
Target Start/End: Original strand, 13507675 - 13507796
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||| ||||||||||| |||| ||||||| ||||||||| || ||||||||| ||| | | |   |||  ||||| ||||  ||||||||| ||||||||    
T  13507675 gatgattttgagtgcctgaatatgtataataatgattagacaagtttttagattgagactgaacctgggaaagtttaaaaatggatttttgagtgaaaaa 13507774  T
Q  159 ggtgaagttcccgagagcaccc 180  Q
     || ||||||||||||||||||    
T  13507775 tgtcaagttcccgagagcaccc 13507796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 180
Target Start/End: Original strand, 13597207 - 13597328
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||| ||||||||||| |||| ||||||| ||||||||| || ||||||||| ||| | | |   |||  ||||| ||||  ||||||||| ||||||||    
T  13597207 gatgattttgagtgcctgaatatgtataataatgattagacaagtttttagattgagactgaacctgggaaagtttaaaaatggatttttgagtgaaaaa 13597306  T
Q  159 ggtgaagttcccgagagcaccc 180  Q
     || ||||||||||||||||||    
T  13597307 tgtcaagttcccgagagcaccc 13597328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 180
Target Start/End: Original strand, 19154475 - 19154596
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||| |||||||| || |||| ||||| | |||||||||| | ||||||||| ||| ||| |  |  | |||||||| ||||||||||||| |||||| |    
T  19154475 gatgattttgagttcctgaatatgtattataatgattagggaagtttttagactgagattgaacacagggaagttaagaatgggatttttgggtgaaata 19154574  T
Q  159 ggtgaagttcccgagagcaccc 180  Q
     || ||||||||||||||||||    
T  19154575 tgtcaagttcccgagagcaccc 19154596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 22385375 - 22385448
Alignment:
Q  85 taagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||||||||||||||| ||||||||| ||||||| |  || | |||||||||||||||||||||  ||||||||    
T  22385375 taagaatgattaggcaagtttttagattgaaattgaacatagggaagttaaaaatgggatttttaggtgaaaaa 22385448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 180
Target Start/End: Original strand, 17266582 - 17266703
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||| ||||||||||| |||| ||||||| |||||||||||| ||||||||| ||| ||| |   |    ||||| ||||  ||||||||| ||||||||    
T  17266582 gatgtttttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacctacgaaagtttaaaaatggatttttgggtgaaaaa 17266681  T
Q  159 ggtgaagttcccgagagcaccc 180  Q
     || || |||||||||||||||    
T  17266682 tgtcaaattcccgagagcaccc 17266703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 178
Target Start/End: Complemental strand, 28398079 - 28397963
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    ||||||||||||||   |||| ||||||| ||||||||| |   |||||||| ||||||| |  ||||  |||||||||||| |||||||| ||||||||    
T  28398079 gatggttttgagtgttggaatatgtataataatgattagac---tttttagattgaaattgaacatgggaaagttaaaaatgagatttttgggtgaaaaa 28397983  T
Q  159 ggtgaagttcccgagagcac 178  Q
     || || || ||||||||||    
T  28397982 tgtcaaatttccgagagcac 28397963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 176
Target Start/End: Complemental strand, 20879227 - 20879179
Alignment:
Q  128 gaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgagagc 176  Q
    ||||||||||||||||||||||  ||||||| || ||||||||||||||    
T  20879227 gaagttaaaaatgggatttttggatgaaaaatgtcaagttcccgagagc 20879179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 180
Target Start/End: Complemental strand, 24353550 - 24353434
Alignment:
Q  64 ttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaaggtga 163  Q
    ||||||||||| |||| ||||||| |||||||||||| ||||||||| ||| ||| |   |||  ||||| | ||  ||||||||| |||||||  || |    
T  24353550 ttttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttataaatggatttttgggtgaaaattgtca 24353451  T
Q  164 agttcccgagagcaccc 180  Q
    | |||||||||||||||    
T  24353450 aattcccgagagcaccc 24353434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 74
Target Start/End: Original strand, 36727470 - 36727522
Alignment:
Q  22 catgattttgtgaattaacgtggttggtaaagtctttgatggttttgagtgcc 74  Q
    |||||||||||||||||||||  ||||| |||| || ||||||||||||||||    
T  36727470 catgattttgtgaattaacgtttttggtcaagttttagatggttttgagtgcc 36727522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 59 - 110
Target Start/End: Complemental strand, 37116879 - 37116828
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttaga 110  Q
    |||| ||||||||||| |||| ||||||| |||||||||||| |||||||||    
T  37116879 gatgattttgagtgcctgaatatgtataataatgattaggcaagtttttaga 37116828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 176
Target Start/End: Complemental strand, 17218221 - 17218171
Alignment:
Q  126 gagaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgagagc 176  Q
    |||||||||||||||||||||||| |||||||| || ||  ||||||||||    
T  17218221 gagaagttaaaaatgggatttttgagtgaaaaatgtcaaactcccgagagc 17218171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 138; Significance: 2e-72; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 19 - 184
Target Start/End: Original strand, 9621968 - 9622133
Alignment:
Q  19 catcatgattttgtgaattaacgtggttggtaaagtctttgatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaatt 118  Q
    |||||||||||||||||||||||| |||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  9621968 catcatgattttgtgaattaacgttgttggtcaagtcttagatggttttgagtgctagaatgtgtataagaatgattaggcaggtttttagaatgaaatt 9622067  T
Q  119 cattatggagaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgagagcaccctgat 184  Q
    | |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  9622068 cgttatggagaagttaaagatggaatttttgtgtgaaaaaggtgaagttcccgagagcaccctgat 9622133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 59 - 180
Target Start/End: Original strand, 23527716 - 23527837
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||||||||||||||| | || |||||||||||||||||||| ||||||||| ||||||| |  || |  ||||||||||||||||||||| ||||||||    
T  23527716 gatggttttgagtgcctggatatgtataagaatgattaggcaagtttttagattgaaattgaacataggaaagttaaaaatgggatttttgggtgaaaaa 23527815  T
Q  159 ggtgaagttcccgagagcaccc 180  Q
     || ||||||||||||||||||    
T  23527816 tgtcaagttcccgagagcaccc 23527837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 19 - 113
Target Start/End: Complemental strand, 25738947 - 25738853
Alignment:
Q  19 catcatgattttgtgaattaacgtggttggtaaagtctttgatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatg 113  Q
    ||||||||||||||||||||||||  ||||| | ||||| |||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||    
T  25738947 catcatgattttgtgaattaacgtttttggtcaggtcttagatggttttgagtgcctgaatgcgtataagaatgattaggcaagtttttagaatg 25738853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 59 - 180
Target Start/End: Complemental strand, 18204611 - 18204490
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||||  ||||||||  |  |  | |||||||||||||||||||||| ||||||||    
T  18204611 gatggttttgagtgcctgaatgtgtataagaatgattaggcaagtttttgaaatgaaatcgaacacagggaagttaaaaatgggatttttgggtgaaaaa 18204512  T
Q  159 ggtgaagttcccgagagcaccc 180  Q
     || ||||||| ||||||||||    
T  18204511 tgtcaagttcctgagagcaccc 18204490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 59 - 179
Target Start/End: Original strand, 17229526 - 17229646
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||||||||| ||||| |||  |||||||||||||||||||| ||||||||| ||||||| |  || | |||||||||||||||||||||| ||||||||    
T  17229526 gatggttttgggtgcctgaacatgtataagaatgattaggcaagtttttagattgaaattgaacatagggaagttaaaaatgggatttttgggtgaaaaa 17229625  T
Q  159 ggtgaagttcccgagagcacc 179  Q
     || |||||||| ||||||||    
T  17229626 tgtcaagttcccaagagcacc 17229646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 59 - 178
Target Start/End: Complemental strand, 17106243 - 17106124
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||| ||||||||||| |||| |||||||||||||||||||| ||||||||| ||| ||| |  |  | |||||||||||||||||||||| ||||||||    
T  17106243 gatgattttgagtgcctgaatatgtataagaatgattaggcaagtttttagactgagattgaacacagggaagttaaaaatgggatttttgggtgaaaaa 17106144  T
Q  159 ggtgaagttcccgagagcac 178  Q
     || ||||||||||||||||    
T  17106143 tgtcaagttcccgagagcac 17106124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 59 - 180
Target Start/End: Original strand, 18177260 - 18177381
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||||||||||||||| |||||| |||||||||||||||||| ||||||  ||||||||  |  |  | |||||||||||||||||||||| ||||||||    
T  18177260 gatggttttgagtgcctgaatgtatataagaatgattaggcaagtttttgaaatgaaatcgaacacagggaagttaaaaatgggatttttgggtgaaaaa 18177359  T
Q  159 ggtgaagttcccgagagcaccc 180  Q
     || ||||||| ||||||||||    
T  18177360 tgtcaagttcctgagagcaccc 18177381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 59 - 180
Target Start/End: Complemental strand, 20224475 - 20224354
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||| ||||||||||| |||  || ||||||||||||||||| ||||||||| ||| ||| |  ||||  ||||||||||||||||||||| ||||||||    
T  20224475 gatgattttgagtgcctgaacatgcataagaatgattaggcaagtttttagattgagattgaacatgggaaagttaaaaatgggatttttgggtgaaaaa 20224376  T
Q  159 ggtgaagttcccgagagcaccc 180  Q
     || ||||||||||||||||||    
T  20224375 tgtcaagttcccgagagcaccc 20224354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 59 - 180
Target Start/End: Complemental strand, 22118459 - 22118338
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||| ||||||||||| |||  || ||||||||||||||||| ||||||||| ||| ||| |  ||||  ||||||||||||||||||||| ||||||||    
T  22118459 gatgattttgagtgcctgaacatgcataagaatgattaggcaagtttttagattgagattgaacatgggaaagttaaaaatgggatttttgggtgaaaaa 22118360  T
Q  159 ggtgaagttcccgagagcaccc 180  Q
     || ||||||||||||||||||    
T  22118359 tgtcaagttcccgagagcaccc 22118338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 60 - 180
Target Start/End: Complemental strand, 18453713 - 18453593
Alignment:
Q  60 atggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaag 159  Q
    |||||||||||||||  ||  | |||||||||||||||||| ||||||||| ||||||| |  |||| ||||||||||||| |||||||| ||||||||     
T  18453713 atggttttgagtgccttaacatatataagaatgattaggcaagtttttagattgaaattgaacatggggaagttaaaaatgagatttttgggtgaaaaat 18453614  T
Q  160 gtgaagttcccgagagcaccc 180  Q
    || |||||||||| |||||||    
T  18453613 gtcaagttcccgatagcaccc 18453593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 59 - 180
Target Start/End: Original strand, 18199024 - 18199146
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatggga-tttttgtgtgaaaa 157  Q
    |||||||||||||||| ||||||||||||||||||||||| | |||||| |||||||||| |  |  | |||||||||||||||| |||||| |||||||    
T  18199024 gatggttttgagtgcctgaatgtgtataagaatgattaggaatgtttttggaatgaaattgaacacagggaagttaaaaatgggattttttgggtgaaaa 18199123  T
Q  158 aggtgaagttcccgagagcaccc 180  Q
    |  | ||||||| ||||||||||    
T  18199124 atatcaagttcctgagagcaccc 18199146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 81 - 178
Target Start/End: Complemental strand, 20137158 - 20137061
Alignment:
Q  81 tgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgagagcac 178  Q
    |||||||||||||||||||| ||||||||| ||||||| |  |  || ||||||||||||||||||||| |||||||| || ||||||| ||||||||    
T  20137158 tgtataagaatgattaggcaagtttttagattgaaattgaacagagataagttaaaaatgggatttttgggtgaaaaatgtcaagttccagagagcac 20137061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 81 - 178
Target Start/End: Original strand, 22195711 - 22195808
Alignment:
Q  81 tgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgagagcac 178  Q
    |||||||||||||||||||| ||||||||| ||||||| |  |  || ||||||||||||||||||||| |||||||| || ||||||| ||||||||    
T  22195711 tgtataagaatgattaggcaagtttttagattgaaattgaacagagataagttaaaaatgggatttttgggtgaaaaatgtcaagttccagagagcac 22195808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 64 - 180
Target Start/End: Complemental strand, 18697013 - 18696897
Alignment:
Q  64 ttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaaggtga 163  Q
    ||||||||||| |||| ||||||| |||||||||||| ||||||||| ||| ||  |  |||  |||||||||||||||||||||  || ||||| || |    
T  18697013 ttttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagatggaacatgaggaagttaaaaatgggattttttggttaaaaatgtca 18696914  T
Q  164 agttcccgagagcaccc 180  Q
    |||||||||||||||||    
T  18696913 agttcccgagagcaccc 18696897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 60 - 180
Target Start/End: Complemental strand, 16245858 - 16245737
Alignment:
Q  60 atggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagtta-aaaatgggatttttgtgtgaaaaa 158  Q
    |||||||||||||||  ||| | |||||||||||||||||| ||||||||| |  ||||    || ||||||| | ||||||||||||||| ||||||||    
T  16245858 atggttttgagtgccttaatatatataagaatgattaggcaagtttttagatttgaattagacatagagaagtcagaaaatgggatttttgagtgaaaaa 16245759  T
Q  159 ggtgaagttcccgagagcaccc 180  Q
     || ||||||||||||||||||    
T  16245758 tgtcaagttcccgagagcaccc 16245737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 59 - 158
Target Start/End: Complemental strand, 23539449 - 23539350
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||||||||||||||| |||| |||||||||||| ||||||| ||||||||| ||| ||| |  |  | |||||||||||| ||||||||| ||||||||    
T  23539449 gatggttttgagtgcctgaatatgtataagaatggttaggcaagtttttagactgagattgaacacagggaagttaaaaataggatttttgggtgaaaaa 23539350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 59 - 180
Target Start/End: Complemental strand, 35008681 - 35008560
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||| |||| |||||| |||  |||||||||||||||||||| ||||||||| ||| ||| |  |     ||||||||||||||||||||| ||||||||    
T  35008681 gatgtttttaagtgcctgaacatgtataagaatgattaggcaagtttttagactgagattgaacacatgaaagttaaaaatgggatttttgagtgaaaaa 35008582  T
Q  159 ggtgaagttcccgagagcaccc 180  Q
     || ||||||| ||||||||||    
T  35008581 tgtcaagttcctgagagcaccc 35008560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 64 - 155
Target Start/End: Complemental strand, 18706764 - 18706673
Alignment:
Q  64 ttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaa 155  Q
    ||||||||| | |||| ||||||| |||||||||||| ||||||||| ||| ||  |  |||| |||||||||||||||||||||| |||||    
T  18706764 ttttgagtgtctgaatatgtataataatgattaggcaagtttttagattgagatggaacatggggaagttaaaaatgggatttttgggtgaa 18706673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 59 - 180
Target Start/End: Original strand, 18895925 - 18896047
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattc-attatggagaagttaaaaatgggatttttgtgtgaaaa 157  Q
    |||| ||||||||||  |||| ||||| | ||||||||| || ||||||||| |||||||  |  ||||  |||||| |||||||||||||| |||||||    
T  18895925 gatgtttttgagtgctggaatatgtattataatgattagacaagtttttagattgaaatttgaacatgggaaagttataaatgggatttttgggtgaaaa 18896024  T
Q  158 aggtgaagttcccgagagcaccc 180  Q
    | || || |||||||||||||||    
T  18896025 atgtcaaattcccgagagcaccc 18896047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 176
Target Start/End: Original strand, 31732314 - 31732468
Alignment:
Q  22 catgattttgtgaattaacgtggttggtaaagtctttgatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcat 121  Q
    ||||||||||||||||||| |  | |||  ||| || ||||||||||||||||  ||  ||| ||  |||||||||||| ||||||||| | || ||       
T  31732314 catgattttgtgaattaacattttcggtcgagttttagatggttttgagtgccttaacatgtttagaaatgattaggcaagtttttagattaaatttagg 31732413  T
Q  122 tatggagaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgagagc 176  Q
     || |||||||||||||||||||||||| |||||||| || ||  ||||||||||    
T  31732414 catagagaagttaaaaatgggatttttgagtgaaaaatgtcaaactcccgagagc 31732468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 70 - 182
Target Start/End: Complemental strand, 19023893 - 19023781
Alignment:
Q  70 gtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcc 169  Q
    ||||| |||| ||||||| |||||||||||| ||||||||| ||| ||| |   ||   ||||| ||||  ||||||||| |||||||| || |||||||    
T  19023893 gtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaaaatggatttttgagtgaaaaatgtcaagttcc 19023794  T
Q  170 cgagagcaccctg 182  Q
    |||||||||||||    
T  19023793 cgagagcaccctg 19023781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 81 - 177
Target Start/End: Complemental strand, 23077241 - 23077145
Alignment:
Q  81 tgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgagagca 177  Q
    |||||||||||||||| ||| ||||||||| ||| ||| |  || | |||||||||||||| ||||||| |||||| | || ||||| |||||||||    
T  23077241 tgtataagaatgattatgcaagtttttagactgagattgaacatagggaagttaaaaatggaatttttgagtgaaatatgtcaagtttccgagagca 23077145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 176
Target Start/End: Complemental strand, 10445781 - 10445733
Alignment:
Q  128 gaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgagagc 176  Q
    |||||||||||||||||||||  |||||||| || ||||||||||||||    
T  10445781 gaagttaaaaatgggatttttaggtgaaaaatgtcaagttcccgagagc 10445733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 107
Target Start/End: Complemental strand, 23501343 - 23501258
Alignment:
Q  22 catgattttgtgaattaacgtggttggtaaagtctttgatggttttgagtgccagaatgtgtataagaatgattaggcaggttttt 107  Q
    ||||||||| |||||||||||  | ||| |||| ||  |||||||||||||||  ||  |||||| ||||||||||||| ||||||    
T  23501343 catgattttatgaattaacgttttgggtcaagttttatatggttttgagtgccttaacatgtataggaatgattaggcaagttttt 23501258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 134; Significance: 6e-70; HSPs: 3)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 19 - 184
Target Start/End: Original strand, 11740 - 11905
Alignment:
Q  19 catcatgattttgtgaattaacgtggttggtaaagtctttgatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaatt 118  Q
    ||||||||||||| |||||||||| |||||| ||||||| |||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||||    
T  11740 catcatgattttgcgaattaacgttgttggtcaagtcttagatggttttgagtgctggaatgtgtataagaatgattaggcatgtttttagaatgaaatt 11839  T
Q  119 cattatggagaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgagagcaccctgat 184  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  11840 cattatggagaagttaaaaatgggatttttgtgtgaaaaatgtgaagttcccgagagcaccctgat 11905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301; HSP #2
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 19 - 184
Target Start/End: Original strand, 14892 - 15057
Alignment:
Q  19 catcatgattttgtgaattaacgtggttggtaaagtctttgatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaatt 118  Q
    ||||||||||||| |||||||||| |||||| ||||||| |||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||||    
T  14892 catcatgattttgcgaattaacgttgttggtcaagtcttagatggttttgagtgctggaatgtgtataagaatgattaggcatgtttttagaatgaaatt 14991  T
Q  119 cattatggagaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgagagcaccctgat 184  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  14992 cattatggagaagttaaaaatgggatttttgtgtgaaaaatgtgaagttcccgagagcaccctgat 15057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301; HSP #3
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 19 - 184
Target Start/End: Original strand, 16140 - 16305
Alignment:
Q  19 catcatgattttgtgaattaacgtggttggtaaagtctttgatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaatt 118  Q
    ||||||||||||| |||||||||| |||||| ||||||| |||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||||    
T  16140 catcatgattttgcgaattaacgttgttggtcaagtcttagatggttttgagtgctggaatgtgtataagaatgattaggcatgtttttagaatgaaatt 16239  T
Q  119 cattatggagaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgagagcaccctgat 184  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  16240 cattatggagaagttaaaaatgggatttttgtgtgaaaaatgtgaagttcccgagagcaccctgat 16305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 134; Significance: 6e-70; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 19 - 184
Target Start/End: Original strand, 172485 - 172650
Alignment:
Q  19 catcatgattttgtgaattaacgtggttggtaaagtctttgatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaatt 118  Q
    |||||||||||||||||||||||| |||||| ||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  172485 catcatgattttgtgaattaacgttgttggtcaagtcttagatggttttaagtgccggaatgtgtataagaatgattaggcaggtttttagaatgaaatt 172584  T
Q  119 cattatggagaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgagagcaccctgat 184  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||    
T  172585 cattatggagaagttaaaaatgagatttttgagtgaaaaaggtgaagttctcgagagcaccctgat 172650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 59 - 180
Target Start/End: Original strand, 119217 - 119338
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||| ||||||||||| |||| ||||||| ||||||||| || ||||||||| ||| ||| |  |||| ||| |||||||||||||||||| ||||||||    
T  119217 gatgattttgagtgcctgaatatgtataataatgattagacaagtttttagattgagattgaacatggggaatttaaaaatgggatttttgggtgaaaaa 119316  T
Q  159 ggtgaagttcccgagagcaccc 180  Q
     || ||||||||| ||||||||    
T  119317 tgtcaagttcccgggagcaccc 119338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 134; Significance: 6e-70; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 19 - 184
Target Start/End: Complemental strand, 209494 - 209330
Alignment:
Q  19 catcatgattttgtgaattaacgtggttggtaaagtctttgatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaatt 118  Q
    |||||||||||||||||||||||| |||||| ||||| | |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  209494 catcatgattttgtgaattaacgttgttggtcaagtcctagatggttttgagtgccggaatgtgtataagaatgattaggcag-tttttagaatgaaatt 209396  T
Q  119 cattatggagaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgagagcaccctgat 184  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  209395 cattatggagaagttaaaaatgggatttttgtgtgaaaaagttgaagttcccgagagcaccctgat 209330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 120; Significance: 1e-61; HSPs: 2)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 22 - 184
Target Start/End: Complemental strand, 24779 - 24616
Alignment:
Q  22 catgattttgtgaattaacgtggttggtaaagtctttgatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcat 121  Q
    ||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||  ||| ||||||||||| |||||||||||||||||||||||    
T  24779 catgattttgtgaattaacgttgttggtcaagtcttagatggttttgagtgccagaatgcatatgagaatgattagacaggtttttagaatgaaattcat 24680  T
Q  122 tatggagaagttaaaaatgggatttttgtgtga-aaaaggtgaagttcccgagagcaccctgat 184  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||    
T  24679 tatggagaagttaaaaatgggatttttgtgtgaaaaaaggtgaagttctcgagagcaccatgat 24616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098; HSP #2
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 22 - 184
Target Start/End: Complemental strand, 35649 - 35486
Alignment:
Q  22 catgattttgtgaattaacgtggttggtaaagtctttgatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcat 121  Q
    ||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||  ||| ||||||||||| |||||||||||||||||||||||    
T  35649 catgattttgtgaattaacgttgttggtcaagtcttagatggttttgagtgccagaatgcatatgagaatgattagacaggtttttagaatgaaattcat 35550  T
Q  122 tatggagaagttaaaaatgggatttttgtgtga-aaaaggtgaagttcccgagagcaccctgat 184  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||    
T  35549 tatggagaagttaaaaatgggatttttgtgtgaaaaaaggtgaagttctcgagagcaccatgat 35486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 110; Significance: 1e-55; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 19 - 180
Target Start/End: Complemental strand, 13893143 - 13892982
Alignment:
Q  19 catcatgattttgtgaattaacgtggttggtaaagtctttgatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaatt 118  Q
    |||||||||||||||||||||||| |||||| ||||||| |||||||| ||||||| |||||||||||| |||||||||||| ||||||| |||||||||    
T  13893143 catcatgattttgtgaattaacgttgttggtcaagtcttagatggtttcgagtgccggaatgtgtataacaatgattaggcaagtttttaaaatgaaatt 13893044  T
Q  119 cattatggagaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgagagcaccc 180  Q
     |||| || ||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  13893043 tattacggggaagttaaaaatgggatttttgtgtgaaaaatgtcaagttcccgagagcaccc 13892982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 24 - 180
Target Start/End: Original strand, 9725234 - 9725391
Alignment:
Q  24 tgattttgtgaattaacgtggttggtaaagtctttgatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaa-ttcatt 122  Q
    |||||||||||||||| ||    ||| |||| || ||||||||||||||||  ||| | |||||||||||||||||| ||||||||| ||||| || |      
T  9725234 tgattttgtgaattaatgttagaggttaagttttagatggttttgagtgccttaatatttataagaatgattaggcaagtttttagattgaaaattgaac 9725333  T
Q  123 atggagaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgagagcaccc 180  Q
     |||||||||||||||||||||||||  |||||||| || ||||||||||||||||||    
T  9725334 ttggagaagttaaaaatgggatttttaagtgaaaaatgtcaagttcccgagagcaccc 9725391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 59 - 180
Target Start/End: Original strand, 11768529 - 11768650
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||| ||||||||||| |||  |||||||||||||||||||| ||||||||| ||||||| |   ||| |||||||||||||||||||||  ||||||||    
T  11768529 gatgattttgagtgcctgaacatgtataagaatgattaggcaagtttttagattgaaattgaacttggggaagttaaaaatgggatttttaggtgaaaaa 11768628  T
Q  159 ggtgaagttcccgagagcaccc 180  Q
     || ||||||||||||||||||    
T  11768629 agtcaagttcccgagagcaccc 11768650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 59 - 180
Target Start/End: Original strand, 130404 - 130525
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||||||||| ||||| |||  |||||||||||||||||| | |||| |||| ||||||| |  || | |||||||||||||||||||||| ||||||||    
T  130404 gatggttttgggtgcctgaacatgtataagaatgattaggtaagtttctagattgaaattgaacatagggaagttaaaaatgggatttttgggtgaaaaa 130503  T
Q  159 ggtgaagttcccgagagcaccc 180  Q
    ||| || |||||||||||||||    
T  130504 ggtcaaattcccgagagcaccc 130525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 59 - 180
Target Start/End: Complemental strand, 16996731 - 16996610
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||||||||| ||||| |||  |||||||||||||||||||| ||| ||||| ||||||| |  || | |||||||||||||| ||||||| ||||||||    
T  16996731 gatggttttgggtgcctgaacatgtataagaatgattaggcaagttcttagattgaaattgaacatagggaagttaaaaatggaatttttgggtgaaaaa 16996632  T
Q  159 ggtgaagttcccgagagcaccc 180  Q
     || ||||||||||||||||||    
T  16996631 tgtcaagttcccgagagcaccc 16996610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 64 - 180
Target Start/End: Complemental strand, 42462455 - 42462339
Alignment:
Q  64 ttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaaggtga 163  Q
    ||||| ||||| |||  |||||||||||||||||||| ||||||||| ||||||| |  || | |||||||||||||||||||||| |||||||| || |    
T  42462455 ttttgggtgcctgaacatgtataagaatgattaggcaagtttttagattgaaattgaacattgggaagttaaaaatgggatttttgggtgaaaaatgtca 42462356  T
Q  164 agttcccgagagcaccc 180  Q
    ||||| |||||||||||    
T  42462355 agttctcgagagcaccc 42462339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 59 - 180
Target Start/End: Original strand, 9032934 - 9033055
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||| ||||||||||| |||| ||||||| ||| | ||| || ||||||||| ||||||| |   ||| |||||||||||||||||||||| ||||||||    
T  9032934 gatgattttgagtgcctgaatatgtataataataactagacaagtttttagattgaaattgaacgtggggaagttaaaaatgggatttttgggtgaaaaa 9033033  T
Q  159 ggtgaagttcccgagagcaccc 180  Q
     || || |||||||||||||||    
T  9033034 tgtcaaattcccgagagcaccc 9033055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 59 - 180
Target Start/End: Original strand, 9177255 - 9177376
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||| ||||||||||| |||  |||||||||||||||||| | ||||||||| ||| ||| |     | |||||||||||||||||||||| ||||||||    
T  9177255 gatgtttttgagtgcctgaacatgtataagaatgattaggtaagtttttagattgagattgaacgcagggaagttaaaaatgggatttttgagtgaaaaa 9177354  T
Q  159 ggtgaagttcccgagagcaccc 180  Q
     || || |||||||||||||||    
T  9177355 tgttaaattcccgagagcaccc 9177376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 59 - 180
Target Start/End: Complemental strand, 16092248 - 16092126
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatg-gagaagttaaaaatgggatttttgtgtgaaaa 157  Q
    |||| ||||||||||| |||| |||||||||||||||||| ||||||||||| ||| ||| |    | || |  |||||||||||||||||| |||||||    
T  16092248 gatgattttgagtgcctgaatatgtataagaatgattaggtaggtttttagattgagattgaacgcgagaaagtttaaaaatgggatttttgggtgaaaa 16092149  T
Q  158 aggtgaagttcccgagagcaccc 180  Q
    | || ||||||||||||| ||||    
T  16092148 atgtcaagttcccgagagtaccc 16092126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 59 - 179
Target Start/End: Complemental strand, 14045279 - 14045159
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||| ||||||||||| |||| ||||||| |||||||||||| ||||||||| ||| ||| |   |||  ||||| ||||  ||||||||| ||||||||    
T  14045279 gatgtttttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggatttttgggtgaaaaa 14045180  T
Q  159 ggtgaagttcccgagagcacc 179  Q
     || || ||||||||||||||    
T  14045179 tgtcaaattcccgagagcacc 14045159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 59 - 179
Target Start/End: Complemental strand, 14355309 - 14355189
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||| ||||||||||| |||| ||||||| |||||||||||| ||||||||| ||| ||| |   |||  ||||| ||||  ||||||||| ||||||||    
T  14355309 gatgtttttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggatttttgggtgaaaaa 14355210  T
Q  159 ggtgaagttcccgagagcacc 179  Q
     || || ||||||||||||||    
T  14355209 tgtcaaattcccgagagcacc 14355189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 179
Target Start/End: Original strand, 1867652 - 1867772
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||| |||| |||||| |||| ||||||| |||||||||||| ||||||||| ||| ||| |   |||  ||||| ||||  |||||||||  |||||||    
T  1867652 gatgttttttagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggatttttggatgaaaaa 1867751  T
Q  159 ggtgaagttcccgagagcacc 179  Q
     || || ||||||||||||||    
T  1867752 tgtcaaattcccgagagcacc 1867772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 179
Target Start/End: Complemental strand, 12901852 - 12901740
Alignment:
Q  67 tgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaaggtgaagt 166  Q
    |||||||| |||  ||||||| |||||||||||| ||||||||| ||| ||| |   |||  ||||| ||||  ||||||||| |||||||| || || |    
T  12901852 tgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggatttttgggtgaaaaatgtcaaat 12901753  T
Q  167 tcccgagagcacc 179  Q
    |||||||||||||    
T  12901752 tcccgagagcacc 12901740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 176
Target Start/End: Original strand, 36301127 - 36301175
Alignment:
Q  128 gaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgagagc 176  Q
    ||||||||||||| |||||||| |||||||| || ||||||||||||||    
T  36301127 gaagttaaaaatgagatttttgggtgaaaaatgtcaagttcccgagagc 36301175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 59 - 110
Target Start/End: Original strand, 2529643 - 2529694
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttaga 110  Q
    |||| ||||||||||| |||| ||||||| |||||||||||| |||||||||    
T  2529643 gatgattttgagtgcctgaatatgtataataatgattaggcaagtttttaga 2529694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 15202715 - 15202670
Alignment:
Q  135 aaaatgggatttttgtgtgaaaaaggtgaagttcccgagagcaccc 180  Q
    ||||||||||||| | |||||||| || ||||||||||||||||||    
T  15202715 aaaatgggattttggggtgaaaaatgtcaagttcccgagagcaccc 15202670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 176
Target Start/End: Original strand, 14219435 - 14219483
Alignment:
Q  128 gaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgagagc 176  Q
    |||||||||||||||||||||| |||||||| || ||  ||||||||||    
T  14219435 gaagttaaaaatgggatttttgagtgaaaaatgtcaaactcccgagagc 14219483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 176
Target Start/End: Original strand, 15096107 - 15096155
Alignment:
Q  128 gaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgagagc 176  Q
    |||||||||||||||||||||| |||||||| || ||  ||||||||||    
T  15096107 gaagttaaaaatgggatttttgagtgaaaaatgtcaaactcccgagagc 15096155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 94; Significance: 4e-46; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 19 - 184
Target Start/End: Original strand, 162649 - 162814
Alignment:
Q  19 catcatgattttgtgaattaacgtggttggtaaagtctttgatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaatt 118  Q
    ||||||||||||||||| |||||| |||||| ||||||| || ||||||||||||||||||||||||||||||||| | | | |||||||||||||||||    
T  162649 catcatgattttgtgaaataacgttgttggtcaagtcttagagggttttgagtgccagaatgtgtataagaatgatcaaggaagtttttagaatgaaatt 162748  T
Q  119 cattatggagaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgagagcaccctgat 184  Q
    ||||| ||  ||| ||||| |||||||||||||||| ||| || ||||||||||||||| ||||||    
T  162749 cattacgggaaagataaaattgggatttttgtgtgagaaatgtcaagttcccgagagcatcctgat 162814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 59 - 180
Target Start/End: Complemental strand, 497935 - 497814
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||| ||||| ||||| |||  ||||||| |||||||||||| || |||||| ||||||| |  |||| |||||||||||||||||||||| ||||||||    
T  497935 gatgattttgtgtgcctgaacatgtataataatgattaggcaagtctttagattgaaattgaacatggggaagttaaaaatgggatttttgggtgaaaaa 497836  T
Q  159 ggtgaagttcccgagagcaccc 180  Q
     || ||||||||||||||||||    
T  497835 tgtcaagttcccgagagcaccc 497814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 59 - 180
Target Start/End: Complemental strand, 447004 - 446883
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||| ||||| ||||| |||  ||||||| |||||||||||| || |||||| ||||||| |  |||| |||||||||||||||||||||| ||||||||    
T  447004 gatgattttgggtgcctgaacatgtataataatgattaggcaagtctttagattgaaattgaacatggggaagttaaaaatgggatttttgggtgaaaaa 446905  T
Q  159 ggtgaagttcccgagagcaccc 180  Q
     || ||||| ||||||||||||    
T  446904 tgtcaagtttccgagagcaccc 446883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 74; Significance: 4e-34; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 59 - 180
Target Start/End: Original strand, 18546554 - 18546675
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||| ||||||||||| |||| |||||||||||||||||||| ||||||||| ||||||| |  |||| |||||||||||||||||||||| ||||||||    
T  18546554 gatgattttgagtgcctgaatatgtataagaatgattaggcaagtttttagattgaaattgaacatggggaagttaaaaatgggatttttgggtgaaaaa 18546653  T
Q  159 ggtgaagttcccgagagcaccc 180  Q
     || ||||||||||||||||||    
T  18546654 tgtcaagttcccgagagcaccc 18546675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 22 - 179
Target Start/End: Complemental strand, 34137488 - 34137331
Alignment:
Q  22 catgattttgtgaattaacgtggttggtaaagtctttgatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcat 121  Q
    ||||||||||||| ||||| |  | |||  ||| || |||||||||||||||| |||  |||||||||||||||||||| |||||| || ||||||| |     
T  34137488 catgattttgtgatttaaccttttgggtcgagttttagatggttttgagtgcctgaacatgtataagaatgattaggcaagtttttggattgaaattgaa 34137389  T
Q  122 tatggagaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgagagcacc 179  Q
     |||| |||||||||||||||||||||| |||||||| || |||||||||||||||||    
T  34137388 catggggaagttaaaaatgggatttttgggtgaaaaatgtcaagttcccgagagcacc 34137331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 75 - 180
Target Start/End: Complemental strand, 23287857 - 23287752
Alignment:
Q  75 agaatgtgtataagaatgattaggcaggtttttagaat-gaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgag 173  Q
    ||||| ||||||| |||||||||||| ||||||||||| |||||| | | ||| |||||||||||||||||||||| |||||||| || |||||||||||    
T  23287857 agaatatgtataataatgattaggcaagtttttagaattgaaattgaatctgg-gaagttaaaaatgggatttttgggtgaaaaatgtcaagttcccgag 23287759  T
Q  174 agcaccc 180  Q
    |||||||    
T  23287758 agcaccc 23287752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 59 - 180
Target Start/End: Complemental strand, 21243182 - 21243062
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||||||||| |||||  ||  |||||||||||||||||||| ||||| ||| ||||||| |  |||| ||| | |||||||||||||||| ||||||||    
T  21243182 gatggttttgggtgccttaacatgtataagaatgattaggcaagtttt-agattgaaattgaacatggggaaatgaaaaatgggatttttgggtgaaaaa 21243084  T
Q  159 ggtgaagttcccgagagcaccc 180  Q
     || ||||||||||||||||||    
T  21243083 tgtcaagttcccgagagcaccc 21243062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 59 - 180
Target Start/End: Original strand, 39827605 - 39827727
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | ||||||||| |||| || |  ||||  ||||||||||||||||||||| ||||||||    
T  39827605 gatgattttgagtgcctgaatatgtataataatgattaggaaagtttttagattgaagttgaacatgggaaagttaaaaatgggatttttgggtgaaaaa 39827704  T
Q  159 ggt-gaagttcccgagagcaccc 180  Q
     ||  || |||||||||||||||    
T  39827705 tgtcaaaattcccgagagcaccc 39827727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 59 - 180
Target Start/End: Original strand, 43946959 - 43947080
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||| |||| |||||  |||| ||||||| ||||||||| || ||||||||| ||||||| |  ||||  ||||||||||||| ||||||| ||||||||    
T  43946959 gatgatttttagtgctggaatatgtataataatgattagacaagtttttagattgaaattgaacatgggaaagttaaaaatggaatttttgggtgaaaaa 43947058  T
Q  159 ggtgaagttcccgagagcaccc 180  Q
     || || |||||||||||||||    
T  43947059 tgtcaaattcccgagagcaccc 43947080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 67 - 180
Target Start/End: Original strand, 20519790 - 20519903
Alignment:
Q  67 tgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaaggtgaagt 166  Q
    |||||||| |||  ||||||| |||||||||||| ||||||||| ||| ||| |  ||||  ||||||||||  ||||||||| |||||||| || || |    
T  20519790 tgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacatgggaaagttaaaaaatggatttttgggtgaaaaatgtcaaat 20519889  T
Q  167 tcccgagagcaccc 180  Q
    ||||||||||||||    
T  20519890 tcccgagagcaccc 20519903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 59 - 180
Target Start/End: Complemental strand, 23005260 - 23005138
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaa-atgggatttttgtgtgaaaa 157  Q
    |||| ||||||||||| |||  |||||||||||||||||||| |||||| || ||| ||| |   |||  ||||| ||| |||||||||||  |||||||    
T  23005260 gatgtttttgagtgcctgaacatgtataagaatgattaggcaagttttttgattgagattgaacttgggaaagtttaaacatgggattttttagtgaaaa 23005161  T
Q  158 aggtgaagttcccgagagcaccc 180  Q
    | || ||||||||||||||||||    
T  23005160 atgtcaagttcccgagagcaccc 23005138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 176
Target Start/End: Complemental strand, 23799890 - 23799842
Alignment:
Q  128 gaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgagagc 176  Q
    |||||||||||||||||||||| |||||||| || ||||||| ||||||    
T  23799890 gaagttaaaaatgggatttttgggtgaaaaatgtcaagttcctgagagc 23799842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 180
Target Start/End: Complemental strand, 26392844 - 26392792
Alignment:
Q  128 gaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgagagcaccc 180  Q
    |||||||||||||||||||  | |||||||| || ||||||||||||||||||    
T  26392844 gaagttaaaaatgggatttgggagtgaaaaatgtcaagttcccgagagcaccc 26392792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 180
Target Start/End: Complemental strand, 19672357 - 19672236
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaa-aaatgggatttttgtgtgaaaa 157  Q
    |||| |||||||||   |||| ||||||| |||||||||||| ||||||||| |||  || |   ||| |||||| | |||| ||||||||| |||||||    
T  19672357 gatgattttgagtgtttgaatatgtataataatgattaggcaagtttttagattgagcttgaacctgg-gaagtttagaaataggatttttgggtgaaaa 19672259  T
Q  158 aggtgaagttcccgagagcaccc 180  Q
    | || ||||||||||||||||||    
T  19672258 atgtcaagttcccgagagcaccc 19672236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 67 - 180
Target Start/End: Original strand, 22412733 - 22412846
Alignment:
Q  67 tgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaaggtgaagt 166  Q
    |||||||| |||  ||||| | |||||||||||| ||||||||| ||| ||| |   |||  ||||| ||||  ||||||||| |||||||| || || |    
T  22412733 tgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggatttttgggtgaaaaatgtcaaat 22412832  T
Q  167 tcccgagagcaccc 180  Q
    ||||||||||||||    
T  22412833 tcccgagagcaccc 22412846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 176
Target Start/End: Complemental strand, 19646792 - 19646744
Alignment:
Q  128 gaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgagagc 176  Q
    |||||||||| ||||||||||| |||||||| ||  |||||||||||||    
T  19646792 gaagttaaaattgggatttttgggtgaaaaatgttgagttcccgagagc 19646744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 4e-31; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 59 - 179
Target Start/End: Complemental strand, 15796952 - 15796832
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||| ||| ||| |  |  | |||||||||||||||||||||| ||||||||    
T  15796952 gatggttttgagtgccagaatatgtataagaatgattaggcaagtttttagactgagattgaacacagggaagttaaaaatgggatttttgggtgaaaaa 15796853  T
Q  159 ggtgaagttcccgagagcacc 179  Q
     || |||||||||||||||||    
T  15796852 tgtcaagttcccgagagcacc 15796832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 59 - 180
Target Start/End: Complemental strand, 20572398 - 20572277
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||| ||||||||| | |||| |||||||||||||||||||| ||||||||| ||||||| |  ||||  ||||||||||||||||||||| ||||||||    
T  20572398 gatgattttgagtgtctgaatatgtataagaatgattaggcaagtttttagattgaaattgaacatgggtaagttaaaaatgggatttttgggtgaaaaa 20572299  T
Q  159 ggtgaagttcccgagagcaccc 180  Q
     || || |||||||||||||||    
T  20572298 tgtcaaattcccgagagcaccc 20572277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 59 - 180
Target Start/End: Original strand, 25574059 - 25574180
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||||||||||||||| |||  ||||||||||||||||| || ||||||||| ||||||| |  |||| ||| ||| ||||| |||||||| ||||||||    
T  25574059 gatggttttgagtgcctgaacatgtataagaatgattagacaagtttttagattgaaattgaacatggggaaattataaatgagatttttgggtgaaaaa 25574158  T
Q  159 ggtgaagttcccgagagcaccc 180  Q
     || ||||||||||||||||||    
T  25574159 tgtcaagttcccgagagcaccc 25574180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 59 - 180
Target Start/End: Original strand, 25575252 - 25575373
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||||||||||||||| |||  ||||||||||||||||| || ||||||||| ||||||| |  |||| ||| ||| ||||| |||||||| ||||||||    
T  25575252 gatggttttgagtgcctgaacatgtataagaatgattagacaagtttttagattgaaattgaacatggggaaattataaatgagatttttgggtgaaaaa 25575351  T
Q  159 ggtgaagttcccgagagcaccc 180  Q
     || ||||||||||||||||||    
T  25575352 tgtcaagttcccgagagcaccc 25575373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 59 - 180
Target Start/End: Original strand, 25576445 - 25576566
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||||||||||||||| |||  ||||||||||||||||| || ||||||||| ||||||| |  |||| ||| ||| ||||| |||||||| ||||||||    
T  25576445 gatggttttgagtgcctgaacatgtataagaatgattagacaagtttttagattgaaattgaacatggggaaattataaatgagatttttgggtgaaaaa 25576544  T
Q  159 ggtgaagttcccgagagcaccc 180  Q
     || ||||||||||||||||||    
T  25576545 tgtcaagttcccgagagcaccc 25576566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 59 - 180
Target Start/End: Complemental strand, 25744253 - 25744132
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||||||||||||||| |||| |||||||||||||||||| |  |||||||| ||| ||| |  |  | |||||||||||||||||||||| ||||||||    
T  25744253 gatggttttgagtgcctgaatatgtataagaatgattaggtaaatttttagactgagattgaacacagggaagttaaaaatgggatttttgggtgaaaaa 25744154  T
Q  159 ggtgaagttcccgagagcaccc 180  Q
     || ||||||||||||||||||    
T  25744153 tgtcaagttcccgagagcaccc 25744132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 59 - 180
Target Start/End: Original strand, 26740237 - 26740358
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcat-tatggagaagttaaaaatgggatttttgtgtgaaaa 157  Q
    |||| ||||||||||| |||  |||||||||||||||||||| ||||||||| ||||||| |  | ||| |||||||||||||||||||| | |||||||    
T  26740237 gatgattttgagtgcctgaacatgtataagaatgattaggcaagtttttagattgaaattgaactctgg-gaagttaaaaatgggattttggagtgaaaa 26740335  T
Q  158 aggtgaagttcccgagagcaccc 180  Q
    | || ||||||||||||||||||    
T  26740336 atgtcaagttcccgagagcaccc 26740358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 59 - 180
Target Start/End: Original strand, 27988518 - 27988639
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    ||||||||| |||||| ||||   |||||||||||||||||| |||||||||||||||||||||   | ||||||||||||| || |||||||||||| |    
T  27988518 gatggttttaagtgcctgaatacttataagaatgattaggcaagtttttagaatgaaattcattgcagggaagttaaaaatgagaattttgtgtgaaaga 27988617  T
Q  159 ggtgaagttcccgagagcaccc 180  Q
     || ||||| || |||||||||    
T  27988618 tgtcaagtttccaagagcaccc 27988639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 59 - 180
Target Start/End: Original strand, 26732424 - 26732545
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||| ||||||||||| |||  |||||||||||||||||||| ||||||||| ||||||| |   | | |||||||||||||||||||| | ||||||||    
T  26732424 gatgattttgagtgcctgaacatgtataagaatgattaggcaagtttttagattgaaattgaactttgggaagttaaaaatgggattttggagtgaaaaa 26732523  T
Q  159 ggtgaagttcccgagagcaccc 180  Q
     || || || ||||||| ||||    
T  26732524 tgtcaactttccgagagtaccc 26732545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 60 - 167
Target Start/End: Complemental strand, 23475992 - 23475884
Alignment:
Q  60 atggttttgagtgccagaatgtgtataagaatgattaggcaggttttt-agaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    ||||||||| ||||| |||  |||||||||||||||||||| |||||| ||| ||||||| |  || | |||||||||||||||||||||| ||||||||    
T  23475992 atggttttgggtgcctgaacatgtataagaatgattaggcaagttttttagattgaaattgaacatagggaagttaaaaatgggatttttgggtgaaaaa 23475893  T
Q  159 ggtgaagtt 167  Q
     || |||||    
T  23475892 tgtcaagtt 23475884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 59 - 180
Target Start/End: Complemental strand, 23470313 - 23470191
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggttttt-agaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaa 157  Q
    |||||||||| || || |||  |||||||||||||| ||||| |||||| ||||||||||| |  || | ||||||||||||| |||||||  |||||||    
T  23470313 gatggttttgggttcctgaacatgtataagaatgatgaggcaagttttttagaatgaaattgaacatagggaagttaaaaatgagatttttaggtgaaaa 23470214  T
Q  158 aggtgaagttcccgagagcaccc 180  Q
    | || ||||||| ||||||||||    
T  23470213 atgtcaagttccggagagcaccc 23470191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 59 - 181
Target Start/End: Original strand, 20026529 - 20026651
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||| ||||||||||| |||  ||||||| |||||||||||| ||||||||| ||| ||| |  ||||  ||||| ||||  ||||||||| ||||||||    
T  20026529 gatgattttgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacatgggaaagtttaaaaatggatttttgagtgaaaaa 20026628  T
Q  159 ggtgaagttcccgagagcaccct 181  Q
     || ||  |||||||||||||||    
T  20026629 tgtcaaactcccgagagcaccct 20026651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 180
Target Start/End: Original strand, 22177809 - 22177930
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||| ||||||||||| |||| ||||||| |||||||||||| ||||||||| |||  || |   ||   ||||| ||||  ||||||||| ||||||||    
T  22177809 gatgattttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagtttgaacctgagaaagtttaaaaatggatttttgggtgaaaaa 22177908  T
Q  159 ggtgaagttcccgagagcaccc 180  Q
     || || |||||||||||||||    
T  22177909 tgtcaaattcccgagagcaccc 22177930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 177
Target Start/End: Complemental strand, 10953712 - 10953556
Alignment:
Q  22 catgattttgtgaattaacgtggttggtaaagtctttgatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcat 121  Q
    |||||||||||||||||| ||    ||| |||| || ||||||||||||||||  ||  ||| || |||||||||||||| |||||||| | || ||       
T  10953712 catgattttgtgaattaatgttaaaggtcaagttttagatggttttgagtgccttaacctgtttaggaatgattaggcagatttttagatttaatttgga 10953613  T
Q  122 tatggagaagt-taaaaatgggatttttgtgtgaaaaaggtgaagttcccgagagca 177  Q
     || |||||||  |||||||||||||||| |||||||| || ||  |||||||||||    
T  10953612 catagagaagtcaaaaaatgggatttttgagtgaaaaatgtcaaactcccgagagca 10953556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 129 - 176
Target Start/End: Complemental strand, 21503701 - 21503654
Alignment:
Q  129 aagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgagagc 176  Q
    ||||||||||||||||||| | |||||||| || ||||||||||||||    
T  21503701 aagttaaaaatgggattttggggtgaaaaatgtcaagttcccgagagc 21503654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 176
Target Start/End: Original strand, 20469546 - 20469594
Alignment:
Q  128 gaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgagagc 176  Q
    |||||||||||||||||||||| |||||||| || ||  ||||||||||    
T  20469546 gaagttaaaaatgggatttttgagtgaaaaatgtcaaactcccgagagc 20469594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 6e-30; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 59 - 180
Target Start/End: Original strand, 21533484 - 21533606
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaat-gaaattcattatggagaagttaaaaatgggatttttgtgtgaaaa 157  Q
    |||| ||||||||||| |||| |||||||||||||||||||| ||||||||||| |||||| |   ||| |||||||||||||||||||||| |||||||    
T  21533484 gatgattttgagtgcctgaatatgtataagaatgattaggcaagtttttagaattgaaattgaacctggggaagttaaaaatgggatttttgggtgaaaa 21533583  T
Q  158 aggtgaagttcccgagagcaccc 180  Q
    | || ||||||||||||||||||    
T  21533584 atgtcaagttcccgagagcaccc 21533606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 59 - 180
Target Start/End: Complemental strand, 48521099 - 48520978
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||| |||||||| || |||| ||||||| |||||||||||| ||||||||| ||| ||| |  |||| |||||||||||||||||||||| ||||||||    
T  48521099 gatgtttttgagtacctgaatatgtataataatgattaggcaagtttttagattgagattgaacatggggaagttaaaaatgggatttttgggtgaaaaa 48521000  T
Q  159 ggtgaagttcccgagagcaccc 180  Q
     || ||||||||||||||||||    
T  48520999 tgtcaagttcccgagagcaccc 48520978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 60 - 180
Target Start/End: Original strand, 21042940 - 21043060
Alignment:
Q  60 atggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaag 159  Q
    ||||||||| ||||| |||  |||||||||||||||||||| ||||||||| ||||||| |  || | |||||||||||||| ||||||| ||||||||     
T  21042940 atggttttgggtgcctgaacatgtataagaatgattaggcaagtttttagattgaaattgaacatagggaagttaaaaatggaatttttgggtgaaaaat 21043039  T
Q  160 gtgaagttcccgagagcaccc 180  Q
    || ||||||||||||||||||    
T  21043040 gtcaagttcccgagagcaccc 21043060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 81 - 180
Target Start/End: Complemental strand, 22124795 - 22124696
Alignment:
Q  81 tgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgagagcaccc 180  Q
    |||||||||||||||||||| ||||||||| ||||||| |  || | |||||||||||||||||||||| |||||||| || ||||||||  ||||||||    
T  22124795 tgtataagaatgattaggcaagtttttagattgaaattgaacatagggaagttaaaaatgggatttttgggtgaaaaatgtcaagttcccaggagcaccc 22124696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 59 - 180
Target Start/End: Complemental strand, 16381695 - 16381574
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||||||||||||||| | |  |||||||||||||||||| | ||||||||||||||||| |  |  | ||| |||||||||||||||||| ||||||||    
T  16381695 gatggttttgagtgcctggacatgtataagaatgattaggaaagtttttagaatgaaattgaacacagggaaattaaaaatgggatttttgggtgaaaaa 16381596  T
Q  159 ggtgaagttcccgagagcaccc 180  Q
     || || |||||||||| ||||    
T  16381595 tgtcaacttcccgagagtaccc 16381574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 59 - 180
Target Start/End: Original strand, 52940467 - 52940588
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||| ||||||||||| |||  ||||||| ||| |||||||| || |||||| ||||||| |  | || ||||||||||||| |||||||| ||||||||    
T  52940467 gatgattttgagtgcctgaacatgtataataataattaggcaagtctttagattgaaattgaacacggggaagttaaaaatgagatttttgggtgaaaaa 52940566  T
Q  159 ggtgaagttcccgagagcaccc 180  Q
     || ||||||||||||||||||    
T  52940567 tgtcaagttcccgagagcaccc 52940588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 59 - 180
Target Start/End: Complemental strand, 21683529 - 21683407
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaag-ttaaaaatgggatttttgtgtgaaaa 157  Q
    |||| ||||||||||| |||| ||||||||||||| |||||| ||||||||| |||||||     || | ||| |||||||||||||||||| |||||||    
T  21683529 gatgattttgagtgcctgaatatgtataagaatgactaggcaagtttttagattgaaattgtacttgaaaaagtttaaaaatgggatttttgggtgaaaa 21683430  T
Q  158 aggtgaagttcccgagagcaccc 180  Q
    | || ||||| ||||||||||||    
T  21683429 atgtcaagtttccgagagcaccc 21683407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 59 - 179
Target Start/End: Original strand, 27652811 - 27652931
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||| ||||||||||| |||| || |||| |||||||||||| ||||||||| ||| ||| |   ||  ||||||||||||| |||||||| ||||||||    
T  27652811 gatgtttttgagtgcctgaatatgcataataatgattaggcaagtttttagattgagattgaacgtgaggaagttaaaaatgagatttttgggtgaaaaa 27652910  T
Q  159 ggtgaagttcccgagagcacc 179  Q
     || ||||| |||||||||||    
T  27652911 tgtcaagttaccgagagcacc 27652931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 180
Target Start/End: Original strand, 16367876 - 16367997
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||| ||||||||||| |||| ||||||| |||||||||||| ||||||||| ||| | | |   |||| ||||| |||   ||||||||| ||||||||    
T  16367876 gatgattttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagaatgaacctggaaaagtttaaagatggatttttgggtgaaaaa 16367975  T
Q  159 ggtgaagttcccgagagcaccc 180  Q
     || || |||||||||||||||    
T  16367976 tgtcaaattcccgagagcaccc 16367997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 180
Target Start/End: Complemental strand, 20346305 - 20346214
Alignment:
Q  89 aatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgagagcaccc 180  Q
    |||||||||||| ||||||||| ||| ||| ||  |||  ||||| ||||  ||||||||| |||||||| || ||||||||||||||||||    
T  20346305 aatgattaggcaagtttttagattgagattgatcctgggaaagtttaaaaatggatttttgagtgaaaaaagtcaagttcccgagagcaccc 20346214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 59 - 157
Target Start/End: Original strand, 16093482 - 16093580
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaa 157  Q
    |||||||||||||||| | || ||||||| ||||||| |||| ||||||||| ||| ||| |   |||| ||||||||||  ||||||||| |||||||    
T  16093482 gatggttttgagtgcctggatatgtataataatgatttggcaagtttttagattgagattgaacctggaaaagttaaaaaatggatttttgagtgaaaa 16093580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 59 - 180
Target Start/End: Complemental strand, 20958619 - 20958497
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaa-gttaaaaatgggatttttgtgtgaaaa 157  Q
    ||||||||||||||||  ||  | ||||||||| |||||||| ||||||||| ||||||| |  || | |   ||||||||||||||||||  |||||||    
T  20958619 gatggttttgagtgccttaacatatataagaattattaggcaagtttttagattgaaattgaacatagggttcgttaaaaatgggattttttggtgaaaa 20958520  T
Q  158 aggtgaagttcccgagagcaccc 180  Q
    | || |||||||||| |||||||    
T  20958519 atgtcaagttcccgatagcaccc 20958497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 59 - 180
Target Start/End: Complemental strand, 47191134 - 47191012
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaag-ttaaaaatgggatttttgtgtgaaaa 157  Q
    |||||||||| ||||  |||| ||||||||||||||||| || ||||||||| ||||||  |  |||| |||| ||||| ||| |||||||  |||||||    
T  47191134 gatggttttgggtgcatgaatatgtataagaatgattagacaagtttttagattgaaatggaacatggggaagtttaaatatgagattttttggtgaaaa 47191035  T
Q  158 aggtgaagttcccgagagcaccc 180  Q
    | || || |||| ||||||||||    
T  47191034 atgtcaaattcctgagagcaccc 47191012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 180
Target Start/End: Original strand, 50613706 - 50613827
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||| ||||||||||  |||| ||||||| |||||||||||| ||||||||| ||| ||| |  ||||  ||||| ||||  | ||||| | ||||||||    
T  50613706 gatgattttgagtgcatgaatatgtataataatgattaggcaagtttttagattgagattgaacatgggaaagtttaaaaatgaattttagggtgaaaaa 50613805  T
Q  159 ggtgaagttcccgagagcaccc 180  Q
     || || |||||||||||||||    
T  50613806 tgtcaaattcccgagagcaccc 50613827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 180
Target Start/End: Original strand, 50621534 - 50621655
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||| ||||||||||  |||| ||||||| |||||||||||| ||||||||| ||| ||| |  ||||  ||||| ||||  | ||||| | ||||||||    
T  50621534 gatgattttgagtgcatgaatatgtataataatgattaggcaagtttttagattgagattgaacatgggaaagtttaaaaatgaattttagggtgaaaaa 50621633  T
Q  159 ggtgaagttcccgagagcaccc 180  Q
     || || |||||||||||||||    
T  50621634 tgtcaaattcccgagagcaccc 50621655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 177
Target Start/End: Complemental strand, 50687118 - 50687005
Alignment:
Q  64 ttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaaggtga 163  Q
    ||||||||||| | || ||||||| |||||||||||| ||||||||| ||| ||| |   |||  ||||| ||||  ||||||||| |||||||| || |    
T  50687118 ttttgagtgcctgtatatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggatttttgggtgaaaaatgtca 50687019  T
Q  164 agttcccgagagca 177  Q
    | ||||||||||||    
T  50687018 aattcccgagagca 50687005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 176
Target Start/End: Complemental strand, 35893812 - 35893764
Alignment:
Q  128 gaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgagagc 176  Q
    ||||||||||||| |||||||| |||||||| || ||||||||||||||    
T  35893812 gaagttaaaaatgagatttttgggtgaaaaatgtcaagttcccgagagc 35893764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2080 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: scaffold2080
Description:

Target: scaffold2080; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 59 - 180
Target Start/End: Original strand, 351 - 472
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||| ||||||||||| |||| |||||||||||||||||||| ||||| ||| ||||||| || |||| ||| ||||||||| |||||||| ||||||||    
T  351 gatgattttgagtgcctgaatatgtataagaatgattaggcaagttttaagattgaaattgatcatggggaaattaaaaatgagatttttgggtgaaaaa 450  T
Q  159 ggtgaagttcccgagagcaccc 180  Q
     || ||||||||||||||||||    
T  451 tgtcaagttcccgagagcaccc 472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 63; Significance: 1e-27; HSPs: 2)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 59 - 177
Target Start/End: Complemental strand, 8692 - 8574
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    ||||||||||||||||  ||  ||| |||||||||||||||| ||||||||| ||||||| |  |||| |||||||||||||||||||||| ||||||||    
T  8692 gatggttttgagtgccttaacatgtttaagaatgattaggcaagtttttagattgaaattgaacatggggaagttaaaaatgggatttttgggtgaaaaa 8593  T
Q  159 ggtgaagttcccgagagca 177  Q
     || |||||||||||||||    
T  8592 tgtcaagttcccgagagca 8574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074; HSP #2
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 59 - 173
Target Start/End: Complemental strand, 2729 - 2615
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    ||||||||||||||||  ||  ||| |||||||||||||||| ||||||||| ||||||| |  |||| |||||||||||||||||||||| ||||||||    
T  2729 gatggttttgagtgccttaacatgtttaagaatgattaggcaagtttttagattgaaattgaacatggggaagttaaaaatgggatttttgggtgaaaaa 2630  T
Q  159 ggtgaagttcccgag 173  Q
     || |||||||||||    
T  2629 tgtcaagttcccgag 2615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 5e-27; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 24 - 180
Target Start/End: Original strand, 13591501 - 13591658
Alignment:
Q  24 tgattttgtgaattaacgtggttggtaaagtctttgatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaa-ttcatt 122  Q
    |||||||||||||||| ||    ||| |||| || ||||||||||||||||  ||| | |||||||||||||||||| ||||||||| ||||| || |      
T  13591501 tgattttgtgaattaatgttagaggttaagttttagatggttttgagtgccttaatatttataagaatgattaggcaagtttttagattgaaaattgaac 13591600  T
Q  123 atggagaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgagagcaccc 180  Q
     |||||||||||||||||||||||||  |||||||| || ||||||||||||||||||    
T  13591601 ttggagaagttaaaaatgggatttttaagtgaaaaatgtcaagttcccgagagcaccc 13591658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 59 - 175
Target Start/End: Complemental strand, 152600 - 152484
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||| ||||||||||| |||| |||||||||||||||||||| ||||||||| ||||||| |  |||| ||||||||||||| |||||||  ||||||||    
T  152600 gatgattttgagtgcctgaatatgtataagaatgattaggcaagtttttagattgaaattgaacatggggaagttaaaaatgagatttttaggtgaaaaa 152501  T
Q  159 ggtgaagttcccgagag 175  Q
     || |||||||||||||    
T  152500 tgtcaagttcccgagag 152484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 59 - 180
Target Start/End: Complemental strand, 15792306 - 15792185
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||| ||||||||| | |||| ||||||| |||||||||||| ||||||||| ||||||| |  ||||  |||||||||||| |||||||| ||||||||    
T  15792306 gatgattttgagtgtctgaatatgtataataatgattaggcaagtttttagattgaaattgaacatgggaaagttaaaaatgagatttttgggtgaaaaa 15792207  T
Q  159 ggtgaagttcccgagagcaccc 180  Q
     || || |||||||||||||||    
T  15792206 tgtcaaattcccgagagcaccc 15792185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 59 - 180
Target Start/End: Original strand, 32306585 - 32306706
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    ||||||||||||||||  ||  ||||||| |||||||||||| ||||||||| ||||||| |  | || ||||||||||||| |||||||| ||||||||    
T  32306585 gatggttttgagtgcctaaacatgtataataatgattaggcaagtttttagattgaaattgaacacggggaagttaaaaatgagatttttgagtgaaaaa 32306684  T
Q  159 ggtgaagttcccgagagcaccc 180  Q
     || |||||||||||| |||||    
T  32306685 tgtcaagttcccgagatcaccc 32306706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 59 - 180
Target Start/End: Complemental strand, 40907583 - 40907462
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||| |||||||| ||  ||| |||||||||||||||||||| ||||||||| |||||||   | |  ||||||| ||||||||||||||| ||||||||    
T  40907583 gatgattttgagtaccttaatatgtataagaatgattaggcaagtttttagattgaaattggatgtacagaagtttaaaatgggatttttgggtgaaaaa 40907484  T
Q  159 ggtgaagttcccgagagcaccc 180  Q
     || ||||||||||||||||||    
T  40907483 tgtcaagttcccgagagcaccc 40907462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 59 - 180
Target Start/End: Original strand, 26050085 - 26050206
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||| ||||| ||||| |||  |||||||||||||||||||| ||| ||||| ||||||| |  || | |||||||||||||  ||||||| ||||||||    
T  26050085 gatgattttgggtgcctgaacatgtataagaatgattaggcaagttcttagattgaaattgaacatagggaagttaaaaatgaaatttttgagtgaaaaa 26050184  T
Q  159 ggtgaagttcccgagagcaccc 180  Q
     || ||||||||||||||||||    
T  26050185 tgtcaagttcccgagagcaccc 26050206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 59 - 179
Target Start/End: Original strand, 14852464 - 14852584
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||| ||||||||||| | |  |||||||||||||||||||| |||| |||| | ||||| |  |||| |||||||||| |||||||||||  |||||||    
T  14852464 gatgattttgagtgcctggacatgtataagaatgattaggcaagtttatagattaaaattgaacatggggaagttaaaagtgggatttttggatgaaaaa 14852563  T
Q  159 ggtgaagttcccgagagcacc 179  Q
     || |||||||||||||||||    
T  14852564 cgtcaagttcccgagagcacc 14852584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 59 - 177
Target Start/End: Complemental strand, 16043544 - 16043426
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||| |||||||||||  ||| |||||||||||||||||  |   ||||||| ||||||| |  || | |||||||||||||||||||||| ||||||||    
T  16043544 gatgattttgagtgcctcaatatgtataagaatgattagaaaaaattttagattgaaattgaacatagggaagttaaaaatgggatttttgggtgaaaaa 16043445  T
Q  159 ggtgaagttcccgagagca 177  Q
     || |||||||||||||||    
T  16043444 tgtcaagttcccgagagca 16043426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 22 - 180
Target Start/End: Complemental strand, 27996460 - 27996302
Alignment:
Q  22 catgattttgtgaattaacgtggttggtaaagtctttgatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcat 121  Q
    |||||||||||||||||| || |  ||| |||| || ||||||||||||||||  ||  ||| || |||||||||| || ||||||||| | |||||       
T  27996460 catgattttgtgaattaatgttggaggtcaagttttagatggttttgagtgccttaacctgtttaggaatgattagacaagtttttagatttaaattgga 27996361  T
Q  122 tatggagaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgagagcaccc 180  Q
     ||   |||||||||||||| ||||| | ||||||||||| ||||||||||||||||||    
T  27996360 catatggaagttaaaaatggaattttggggtgaaaaaggtcaagttcccgagagcaccc 27996302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 180
Target Start/End: Complemental strand, 14651188 - 14651091
Alignment:
Q  83 tataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgagagcaccc 180  Q
    ||||||||||| |||||| ||||||||| ||||| | |  || | ||||||||||||||| |||||| |||||||| || ||||||||||||||||||    
T  14651188 tataagaatgagtaggcaagtttttagattgaaaatgaacatagggaagttaaaaatggggtttttgggtgaaaaatgtcaagttcccgagagcaccc 14651091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 59 - 180
Target Start/End: Complemental strand, 26789869 - 26789748
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||| ||||||||||| |||| ||||||| || ||||||||| ||||||||| ||||||| |  ||||  ||||| |||||| |||||||| ||||||||    
T  26789869 gatgattttgagtgcctgaatatgtataataacgattaggcaagtttttagattgaaattgaacatgggaaagtttaaaatgtgatttttgggtgaaaaa 26789770  T
Q  159 ggtgaagttcccgagagcaccc 180  Q
      | || |||||||||||||||    
T  26789769 tatcaaattcccgagagcaccc 26789748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 172
Target Start/End: Complemental strand, 50160709 - 50160558
Alignment:
Q  22 catgattttgtgaattaacgtggttggtaaagtctttgatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcat 121  Q
    |||||||||||||||||| ||    |||  ||| || |||||||||||||| |  ||||||||||||||||||||||||  |||||||| | ||| |       
T  50160709 catgattttgtgaattaatgttagaggtcgagttttagatggttttgagtgtcttaatgtgtataagaatgattaggcaaatttttagatttaaactgga 50160610  T
Q  122 tatggagaagtta-aaaatgggatttttgtgtgaaaaaggtgaagttcccga 172  Q
     || ||||||||| ||||||||||||||  || ||||| || ||||||||||    
T  50160609 catagagaagttagaaaatgggatttttcagtaaaaaatgtcaagttcccga 50160558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 176
Target Start/End: Complemental strand, 10273186 - 10273138
Alignment:
Q  128 gaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgagagc 176  Q
    |||| ||||||||||||||||| |||||||| || ||||||||||||||    
T  10273186 gaagctaaaaatgggatttttgggtgaaaaatgtcaagttcccgagagc 10273138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 176
Target Start/End: Complemental strand, 14477222 - 14477174
Alignment:
Q  128 gaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgagagc 176  Q
    |||||||||| ||||||||||| |||||||| || ||||||||||||||    
T  14477222 gaagttaaaattgggatttttgggtgaaaaatgttaagttcccgagagc 14477174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 180
Target Start/End: Complemental strand, 19738689 - 19738637
Alignment:
Q  128 gaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgagagcaccc 180  Q
    |||||||||||||| ||||| | || |||||||| ||||||||||||||||||    
T  19738689 gaagttaaaaatggtattttggggtaaaaaaggtcaagttcccgagagcaccc 19738637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 85 - 180
Target Start/End: Original strand, 15365535 - 15365630
Alignment:
Q  85 taagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgagagcaccc 180  Q
    |||||| || |||||| |||||||||||||||||     | | | |||||||||||||||||| | ||||||||||| ||||||| ||||| ||||    
T  15365535 taagaacgagtaggcaagtttttagaatgaaatttgacgtagggtagttaaaaatgggattttggggtgaaaaaggtcaagttccagagagtaccc 15365630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 168
Target Start/End: Complemental strand, 9622074 - 9622034
Alignment:
Q  128 gaagttaaaaatgggatttttgtgtgaaaaaggtgaagttc 168  Q
    |||||||||||||||||||||| |||||||| || ||||||    
T  9622074 gaagttaaaaatgggatttttgggtgaaaaatgtcaagttc 9622034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 5e-27; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 59 - 180
Target Start/End: Complemental strand, 37428225 - 37428104
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    ||||||||||||||||  ||| |||||||||||||||||||| ||||||||| ||||||| |  || | |||| ||||||||||||||||| ||||||||    
T  37428225 gatggttttgagtgccttaatatgtataagaatgattaggcaagtttttagattgaaattgaacatagggaagctaaaaatgggatttttgggtgaaaaa 37428126  T
Q  159 ggtgaagttcccgagagcaccc 180  Q
     || ||||||||||||| ||||    
T  37428125 tgtcaagttcccgagagtaccc 37428104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 86 - 184
Target Start/End: Original strand, 16839288 - 16839386
Alignment:
Q  86 aagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgagagcaccctgat 184  Q
    ||||||||||||||| |||||||||||||||||||||| |  ||||||||||||| ||||||||||||||||| || |||||  ||| |||| ||||||    
T  16839288 aagaatgattaggcaagtttttagaatgaaattcattacgaggaagttaaaaatgagatttttgtgtgaaaaatgtcaagttttcgatagcatcctgat 16839386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 81 - 180
Target Start/End: Complemental strand, 15246530 - 15246431
Alignment:
Q  81 tgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgagagcaccc 180  Q
    ||||| |||||||||||||| ||||||||| ||||||| |  |||| |||||||||||||||||||||| || ||||| || || |||||||||||||||    
T  15246530 tgtatgagaatgattaggcaagtttttagattgaaattgaacatggggaagttaaaaatgggatttttgggttaaaaatgtcaaattcccgagagcaccc 15246431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 81 - 180
Target Start/End: Complemental strand, 15207448 - 15207349
Alignment:
Q  81 tgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgagagcaccc 180  Q
    ||||| |||||||||||||| ||||||||| ||||||| |  |||| ||||| |||||||||||||||| || ||||| || || |||||||||||||||    
T  15207448 tgtatgagaatgattaggcaagtttttagattgaaattgaacatggggaagtcaaaaatgggatttttgggttaaaaatgtcaaattcccgagagcaccc 15207349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 65 - 178
Target Start/End: Complemental strand, 9578127 - 9578014
Alignment:
Q  65 tttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaaggtgaa 164  Q
    |||||||||| |||  ||||| | |||||||||||| | ||||||| ||||||| |  || | |||||||||||||||||||| | |||||||| || ||    
T  9578127 tttgagtgcctgaacatgtatgataatgattaggcaagattttagattgaaattgaacatagggaagttaaaaatgggattttggggtgaaaaatgtcaa 9578028  T
Q  165 gttcccgagagcac 178  Q
    ||||||||||||||    
T  9578027 gttcccgagagcac 9578014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 59 - 180
Target Start/End: Complemental strand, 23275196 - 23275075
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||| ||||||||||| |||| ||||||| |||||||||||| ||||||||| ||| ||| |   |||  ||||| ||||  ||||||||| ||||||||    
T  23275196 gatgattttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacttgggaaagtttaaaaatggatttttgagtgaaaaa 23275097  T
Q  159 ggtgaagttcccgagagcaccc 180  Q
     || ||||||||||||||||||    
T  23275096 tgtcaagttcccgagagcaccc 23275075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 81 - 180
Target Start/End: Complemental strand, 15265651 - 15265552
Alignment:
Q  81 tgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgagagcaccc 180  Q
    ||||| |||||||||||||| |||||| || ||||||| |  |||| ||| |||||||||||||||||| || ||||| || || |||||||||||||||    
T  15265651 tgtatgagaatgattaggcaagttttttgattgaaattgaacatggggaatttaaaaatgggatttttgggttaaaaatgtcaaattcccgagagcaccc 15265552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 59 - 180
Target Start/End: Original strand, 32402568 - 32402691
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatga-aattcattat-ggagaagttaaaaatgggatttttgtgtgaaa 156  Q
    ||||||||||||||||  ||  |||||||||||| ||||||| ||||||||| | | |||| | ||| || ||||||||| |||||||||||| ||||||    
T  32402568 gatggttttgagtgccttaagatgtataagaatggttaggcaagtttttagattaagaattgaatattggggaagttaaagatgggatttttgggtgaaa 32402667  T
Q  157 aaggtgaagttcccgagagcaccc 180  Q
    |  || ||||||||||||||||||    
T  32402668 attgtcaagttcccgagagcaccc 32402691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 59 - 180
Target Start/End: Complemental strand, 316651 - 316529
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatg-gagaagttaaaaatgggatttttgtgtgaaaa 157  Q
    |||| ||||||||||| |||| ||||||| |||||||||||| ||||||||| ||| ||| |  | | || |  |||||||||||||||||| |||||||    
T  316651 gatgtttttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattaaacacgagaaattttaaaaatgggatttttgggtgaaaa 316552  T
Q  158 aggtgaagttcccgagagcaccc 180  Q
    | || || |||||||||||||||    
T  316551 atgtcaaattcccgagagcaccc 316529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 16828707 - 16828779
Alignment:
Q  19 catcatgattttgtgaattaacgtggttggtaaagtctttgatggttttgagtgccagaatgtgtataagaat 91  Q
    |||||||||||||| || |||||| |||| | ||||||| ||||||||| |||||| ||||||||||||||||    
T  16828707 catcatgattttgttaaataacgttgttgatcaagtcttagatggttttcagtgccggaatgtgtataagaat 16828779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 180
Target Start/End: Original strand, 605957 - 606078
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||| ||||||||||| |||||||||||| ||||||||||||  ||| |||| ||| ||| |   |||| ||||| ||||  ||||||||| ||||| ||    
T  605957 gatgattttgagtgcctgaatgtgtataataatgattaggcaattttctagattgagattgaacctggaaaagtttaaaaatggatttttgggtgaacaa 606056  T
Q  159 ggtgaagttcccgagagcaccc 180  Q
     || || |||||||||||||||    
T  606057 tgtcaaattcccgagagcaccc 606078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 180
Target Start/End: Original strand, 23318333 - 23318448
Alignment:
Q  64 ttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattca-ttatggagaagttaaaaatgggatttttgtgtgaaaaaggtg 162  Q
    ||||||||||| |||  ||| ||||||||||||||||    |||||| ||||||| | || ||| |||||||||||||||||||| ||| |||||| ||     
T  23318333 ttttgagtgcctgaacatgtttaagaatgattaggcaaaaatttagattgaaattgaattctgg-gaagttaaaaatgggatttt-gtgggaaaaatgtc 23318430  T
Q  163 aagttcccgagagcaccc 180  Q
    ||||||||||||||||||    
T  23318431 aagttcccgagagcaccc 23318448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 59 - 180
Target Start/End: Original strand, 23412839 - 23412961
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||| ||||||||||| |||| ||||||| |||||||||||| ||||||||| ||| |||     |||  ||||| ||||  ||||||||| ||||||||    
T  23412839 gatgattttgagtgcctgaatatgtataaaaatgattaggcaagtttttagattgagattggacctgggaaagtttaaaaatggatttttgagtgaaaaa 23412938  T
Q  159 ggt-gaagttcccgagagcaccc 180  Q
     ||  ||||||||||||||||||    
T  23412939 tgtcaaagttcccgagagcaccc 23412961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 176
Target Start/End: Complemental strand, 6156537 - 6156489
Alignment:
Q  128 gaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgagagc 176  Q
    ||||||||||||| ||||||||||||||||| || || |||||||||||    
T  6156537 gaagttaaaaatgagatttttgtgtgaaaaatgtcaatttcccgagagc 6156489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 128 - 175
Target Start/End: Original strand, 21845903 - 21845950
Alignment:
Q  128 gaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgagag 175  Q
    |||||||||||||||||||||  |||||||| || |||||||||||||    
T  21845903 gaagttaaaaatgggattttttggtgaaaaatgtcaagttcccgagag 21845950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 176
Target Start/End: Complemental strand, 25201697 - 25201651
Alignment:
Q  130 agttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgagagc 176  Q
    ||||||||||| |||||||| |||||||| || ||||||||||||||    
T  25201697 agttaaaaatgagatttttgggtgaaaaatgtcaagttcccgagagc 25201651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 174
Target Start/End: Original strand, 48043967 - 48044013
Alignment:
Q  128 gaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgaga 174  Q
    ||||||||||||| |||||||| |||||||| || ||||||||||||    
T  48043967 gaagttaaaaatgagatttttgggtgaaaaatgtcaagttcccgaga 48044013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 176
Target Start/End: Original strand, 12917802 - 12917850
Alignment:
Q  128 gaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgagagc 176  Q
    ||||||||||||| ||||||||  ||||||| || ||||||||||||||    
T  12917802 gaagttaaaaatgagatttttggatgaaaaatgtcaagttcccgagagc 12917850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 176
Target Start/End: Original strand, 15025552 - 15025600
Alignment:
Q  128 gaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgagagc 176  Q
    |||||||||||||||||||||  |||||||| || ||||||| ||||||    
T  15025552 gaagttaaaaatgggattttttggtgaaaaatgtcaagttcctgagagc 15025600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 172
Target Start/End: Original strand, 45803816 - 45803860
Alignment:
Q  128 gaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccga 172  Q
    |||||||||||||||||||||  |||||||| || ||||||||||    
T  45803816 gaagttaaaaatgggattttttggtgaaaaatgtcaagttcccga 45803860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 176
Target Start/End: Complemental strand, 48631009 - 48630961
Alignment:
Q  128 gaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgagagc 176  Q
    ||||||||||||  |||||||| |||||||| || ||||||||||||||    
T  48631009 gaagttaaaaataagatttttgggtgaaaaatgtcaagttcccgagagc 48630961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0780 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0780
Description:

Target: scaffold0780; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 59 - 180
Target Start/End: Original strand, 2938 - 3059
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    ||||||||||||||||  ||| | ||||| |||||||||||| ||||||||| ||| ||| |  |||| ||||||||||||||||||||||  |||||||    
T  2938 gatggttttgagtgccttaatatatataataatgattaggcaagtttttagattgagattgaacatggggaagttaaaaatgggatttttggatgaaaaa 3037  T
Q  159 ggtgaagttcccgagagcaccc 180  Q
     || ||||||||||||||||||    
T  3038 tgtcaagttcccgagagcaccc 3059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 59 - 180
Target Start/End: Original strand, 55274 - 55395
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||| ||||||||||| |||  |||||||||||||||||||| ||||||||| | ||||| |  |||| |||||||||| || |||||||| ||||||||    
T  55274 gatgattttgagtgcctgaacatgtataagaatgattaggcaagtttttagattaaaattgaacatggggaagttaaaagtgagatttttgggtgaaaaa 55373  T
Q  159 ggtgaagttcccgagagcaccc 180  Q
     || ||||||||||||||||||    
T  55374 tgtcaagttcccgagagcaccc 55395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 59 - 180
Target Start/End: Original strand, 37743 - 37864
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||| |||||||||||||||| |||||||||||||||||| | ||||||||| ||||||| |  ||||  ||||||||| ||||||||||| ||||||||    
T  37743 gatgattttgagtgccagaatatgtataagaatgattaggaaagtttttagattgaaattgaacatgggaaagttaaaagtgggatttttgggtgaaaaa 37842  T
Q  159 ggtgaagttcccgagagcaccc 180  Q
     || || |||||||| ||||||    
T  37843 tgtcaaattcccgagtgcaccc 37864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 59 - 180
Target Start/End: Complemental strand, 332847 - 332726
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||| ||||||||||| |||| |||||||||||||||||| | ||||||||| ||| ||| |  ||||  ||||||||||||||||||||| ||||||||    
T  332847 gatgattttgagtgcctgaatatgtataagaatgattaggaaagtttttagattgagattgaacatgggaaagttaaaaatgggatttttgggtgaaaaa 332748  T
Q  159 ggtgaagttcccgagagcaccc 180  Q
     || || |||||||||||||||    
T  332747 tgtcaaattcccgagagcaccc 332726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1419 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold1419
Description:

Target: scaffold1419; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 59 - 180
Target Start/End: Complemental strand, 554 - 433
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    ||||||||||| |||| |||  |||| ||||||||||||||| ||||||||| ||||||| |  || |  ||||||||||||||||||||| ||||||||    
T  554 gatggttttgaatgcctgaacatgtacaagaatgattaggcaagtttttagattgaaattgaacataggaaagttaaaaatgggatttttgggtgaaaaa 455  T
Q  159 ggtgaagttcccgagagcaccc 180  Q
     || || |||||||||||||||    
T  454 tgtcaaattcccgagagcaccc 433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 59 - 176
Target Start/End: Original strand, 17777 - 17894
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    ||||||||||||||||  ||  ||| ||||||||||||||||  |||||||| ||||||| |  |||| |||||||||||||||||||| | ||||||||    
T  17777 gatggttttgagtgccttaacatgtttaagaatgattaggcaattttttagattgaaattgaacatggggaagttaaaaatgggattttcgggtgaaaaa 17876  T
Q  159 ggtgaagttcccgagagc 176  Q
     || ||||||||||||||    
T  17877 tgtcaagttcccgagagc 17894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 54; Significance: 3e-22; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 59 - 180
Target Start/End: Complemental strand, 13850 - 13729
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    ||||||||||||||||  ||  |||||||||||| ||||||| ||||| ||| ||||||| | ||  | |||||||||||||||||||||| ||||||||    
T  13850 gatggttttgagtgccttaacatgtataagaatggttaggcaagttttcagattgaaattgaatagagggaagttaaaaatgggatttttgggtgaaaaa 13751  T
Q  159 ggtgaagttcccgagagcaccc 180  Q
     |  ||||||||||||||||||    
T  13750 tgacaagttcccgagagcaccc 13729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 59 - 180
Target Start/End: Complemental strand, 22727 - 22606
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    ||||||||||||| ||  ||  |||||||||||| ||||||| ||||| ||| ||||||| |  |  | |||||||||||||||||||||  ||||||||    
T  22727 gatggttttgagtaccttaacatgtataagaatggttaggcaagttttaagattgaaattgaacaaagggaagttaaaaatgggattttttggtgaaaaa 22628  T
Q  159 ggtgaagttcccgagagcaccc 180  Q
     || ||||||||||||||||||    
T  22627 tgtcaagttcccgagagcaccc 22606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 52; Significance: 5e-21; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 81 - 180
Target Start/End: Original strand, 75460 - 75559
Alignment:
Q  81 tgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgagagcaccc 180  Q
    |||||||||||||||||||| ||||||||| ||||||| |  |  |||||| ||||||||||||||||| |||||||| || ||||||| ||||||||||    
T  75460 tgtataagaatgattaggcaagtttttagattgaaattgaccagagagaagataaaaatgggatttttgggtgaaaaatgtcaagttccagagagcaccc 75559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0914 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0914
Description:

Target: scaffold0914; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 59 - 180
Target Start/End: Complemental strand, 2236 - 2115
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||| ||||||||||  |||| ||||||| ||||||||| || ||||||||| ||||||| |  ||||  ||||||||||||||||||||| ||||||||    
T  2236 gatgtttttgagtgctggaatatgtataataatgattagacaagtttttagattgaaattgaacatgggaaagttaaaaatgggatttttgggtgaaaaa 2137  T
Q  159 ggtgaagttcccgagagcaccc 180  Q
     || || ||||| |||||||||    
T  2136 tgtcaaattcccaagagcaccc 2115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0750 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0750
Description:

Target: scaffold0750; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 59 - 180
Target Start/End: Complemental strand, 4127 - 4006
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||| ||||||||||  |||| ||||||| ||| |||||||| ||||||||| ||||||| |  |||| ||||| |||||||||||||||| ||||||||    
T  4127 gatgtttttgagtgctggaatatgtataataataattaggcaagtttttagattgaaattgaacatggggaagtaaaaaatgggatttttgggtgaaaaa 4028  T
Q  159 ggtgaagttcccgagagcaccc 180  Q
     || || ||| |||||||||||    
T  4027 tgtcaaattctcgagagcaccc 4006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 59 - 180
Target Start/End: Complemental strand, 3687 - 3566
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    ||||||||||||||||  ||  ||  |||||||||||||||| ||||||||| ||||||| |  |||| ||||||||| |||||||||| | ||||||||    
T  3687 gatggttttgagtgccttaacatgcttaagaatgattaggcaagtttttagattgaaattaaacatggggaagttaaatatgggattttcgggtgaaaaa 3588  T
Q  159 ggtgaagttcccgagagcaccc 180  Q
     || |||||||||| |||||||    
T  3587 tgtcaagttcccgaaagcaccc 3566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 59 - 180
Target Start/End: Original strand, 19257 - 19378
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||| |||||| |||| |||| ||| |||||||||||||||| ||||||||| ||| ||| |  ||||  ||||||||||||||||||||| ||||||||    
T  19257 gatgattttgaatgcctgaatatgtgtaagaatgattaggcaagtttttagattgagattgaacatgggaaagttaaaaatgggatttttgggtgaaaaa 19356  T
Q  159 ggtgaagttcccgagagcaccc 180  Q
     || |||||||| |||| ||||    
T  19357 tgtcaagttcccaagagtaccc 19378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 59 - 179
Target Start/End: Complemental strand, 9419 - 9299
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||| ||||||||||| |||| ||||||||||||||||| || ||||||||| ||||||| |  | || | |||||||| ||||||||||| | ||||||    
T  9419 gatgattttgagtgcctgaatatgtataagaatgattagacaagtttttagattgaaattgaacaaggtggagttaaaattgggatttttgggcgaaaaa 9320  T
Q  159 ggtgaagttcccgagagcacc 179  Q
     || |||||||||| ||||||    
T  9319 tgtcaagttcccgacagcacc 9299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0485 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 82 - 180
Target Start/End: Complemental strand, 10637 - 10539
Alignment:
Q  82 gtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgagagcaccc 180  Q
    ||||||||||||||||||| ||| ||||| ||||||| |  || | |||||||||||||||||||||| || ||||| || ||||||| ||||||||||    
T  10637 gtataagaatgattaggcaagttcttagattgaaattgaacatagggaagttaaaaatgggatttttgggttaaaaatgtcaagttcctgagagcaccc 10539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 22 - 140
Target Start/End: Complemental strand, 18051 - 17933
Alignment:
Q  22 catgattttgtgaattaacgtggttggtaaagtctttgatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcat 121  Q
    ||||||||||||| ||||| |  | |||  ||| || |||||||||||||||| | |  |||||||||||||||||||| ||||||||| ||||||| ||    
T  18051 catgattttgtgatttaaccttttgggtcgagtgttagatggttttgagtgcctggacatgtataagaatgattaggcaagtttttagattgaaattgat 17952  T
Q  122 tatggagaagttaaaaatg 140  Q
     |||| |||||||||||||    
T  17951 catggggaagttaaaaatg 17933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 59 - 180
Target Start/End: Original strand, 206114 - 206236
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaag-ttaaaaatgggatttttgtgtgaaaa 157  Q
    |||| ||||||||||| |||| |||||||||||||||| ||| ||||||||| ||||||| |   |||| ||| || |||||| | |||||| |||||||    
T  206114 gatgattttgagtgcctgaatatgtataagaatgattaagcaagtttttagattgaaattgaacttggaaaagttttaaaatgaggtttttgggtgaaaa 206213  T
Q  158 aggtgaagttcccgagagcaccc 180  Q
    | || ||||||||||||||||||    
T  206214 atgtcaagttcccgagagcaccc 206236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 47; Significance: 5e-18; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 82 - 180
Target Start/End: Complemental strand, 1125 - 1027
Alignment:
Q  82 gtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgagagcaccc 180  Q
    ||||||||||||||||||| ||||| ||| ||| |||    |||| |||||||||||||||||||||| |||||||| || || |||||||||||||||    
T  1125 gtataagaatgattaggcaagttttcagattgacattgcacatggggaagttaaaaatgggatttttgggtgaaaaatgtcaaattcccgagagcaccc 1027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 180
Target Start/End: Original strand, 60312 - 60425
Alignment:
Q  67 tgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaaggtgaagt 166  Q
    |||||||| |||  ||||||| |||||||||||| ||||||||| ||| ||| |  ||||  ||||| ||||  ||||||||| |||||||| ||  | |    
T  60312 tgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacatgggaaagtttaaaaatggatttttgggtgaaaaatgtcgaat 60411  T
Q  167 tcccgagagcaccc 180  Q
    ||||||||||||||    
T  60412 tcccgagagcaccc 60425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 180
Target Start/End: Original strand, 166104 - 166201
Alignment:
Q  83 tataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgagagcaccc 180  Q
    ||||||||||| |||||| ||||||||| ||||| | |  || | ||||||||||||||| |||||| |||||||| || ||||||||||||||||||    
T  166104 tataagaatgagtaggcaagtttttagattgaaaatgaacatagggaagttaaaaatggggtttttgggtgaaaaatgtcaagttcccgagagcaccc 166201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0356 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0356
Description:

Target: scaffold0356; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 64 - 180
Target Start/End: Original strand, 257 - 372
Alignment:
Q  64 ttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaaggtga 163  Q
    ||||||||||| | || ||||||  |||||||||||| ||||| ||| ||| ||| |  |||  |||||||||||||||||||||| |||||||| || |    
T  257 ttttgagtgcctggatatgtatattaatgattaggcaagtttt-agattgagattgaacatgaggaagttaaaaatgggatttttgggtgaaaaatgtca 355  T
Q  164 agttcccgagagcaccc 180  Q
    |||||||||||||||||    
T  356 agttcccgagagcaccc 372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 59 - 180
Target Start/End: Original strand, 24186 - 24308
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaag-ttaaaaatgggatttttgtgtgaaaa 157  Q
    |||| ||||||||||| |||| | ||||| |||||||||||| | ||||||| ||| ||| |   ||||  || |||||||||||||||||| || ||||    
T  24186 gatgattttgagtgcctgaatatatataataatgattaggcaagcttttagattgagattgaacctggaatagtttaaaaatgggatttttgggtaaaaa 24285  T
Q  158 aggtgaagttcccgagagcaccc 180  Q
    |||| ||||||||||||||||||    
T  24286 aggtcaagttcccgagagcaccc 24308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 59 - 175
Target Start/End: Original strand, 13994 - 14111
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaa-tgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaa 157  Q
    |||| ||||||||||| |||| | ||||| | |||||||||| |||||||||| ||||||| | | ||| || ||| ||||| ||||||||| |||||||    
T  13994 gatgattttgagtgcctgaatatatataatattgattaggcaagtttttagaattgaaattgaatctggggaggtttaaaataggatttttgggtgaaaa 14093  T
Q  158 aggtgaagttcccgagag 175  Q
    | || |||||||||||||    
T  14094 atgtcaagttcccgagag 14111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 59 - 180
Target Start/End: Original strand, 220795 - 220916
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    ||||| |||||||||| |||  ||| ||||||||||| | || ||||||||| ||||||| |  || | |||||||||||||  ||||||| ||||||||    
T  220795 gatgggtttgagtgcctgaacatgtgtaagaatgattcgacaagtttttagattgaaattgaacatagggaagttaaaaatgaaatttttgggtgaaaaa 220894  T
Q  159 ggtgaagttcccgagagcaccc 180  Q
     || || |||||||||||||||    
T  220895 tgtcaaattcccgagagcaccc 220916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 59 - 180
Target Start/End: Complemental strand, 86076 - 85955
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||| ||||||||||| | || ||||||  ||||||||||||  |||||||| ||| ||| |  | |  ||||||||||||| |||||||| ||||||||    
T  86076 gatgattttgagtgcctggatatgtatattaatgattaggcaaatttttagattgagattgaacaggaggaagttaaaaatgagatttttgggtgaaaaa 85977  T
Q  159 ggtgaagttcccgagagcaccc 180  Q
     || ||||||||||||||||||    
T  85976 tgtcaagttcccgagagcaccc 85955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0561 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 180
Target Start/End: Complemental strand, 10935 - 10883
Alignment:
Q  128 gaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgagagcaccc 180  Q
    |||||||||||||||||||||| |||||||| || ||||||||||||||||||    
T  10935 gaagttaaaaatgggatttttgggtgaaaaatgtcaagttcccgagagcaccc 10883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 180
Target Start/End: Original strand, 29103 - 29155
Alignment:
Q  128 gaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgagagcaccc 180  Q
    |||||||||||||||||||||| |||||||| || ||||||||||||||||||    
T  29103 gaagttaaaaatgggatttttgggtgaaaaatgtcaagttcccgagagcaccc 29155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0716 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 2)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 128 - 179
Target Start/End: Complemental strand, 1510 - 1459
Alignment:
Q  128 gaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgagagcacc 179  Q
    |||||||||||||||||||||| |||||||| || |||||||||||||||||    
T  1510 gaagttaaaaatgggatttttgggtgaaaaatgtcaagttcccgagagcacc 1459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0716; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 107
Target Start/End: Complemental strand, 1650 - 1602
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggttttt 107  Q
    ||||||||||||||||  ||  |||||||||||||||||||| ||||||    
T  1650 gatggttttgagtgccgtaacatgtataagaatgattaggcaagttttt 1602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 180
Target Start/End: Complemental strand, 7185 - 7064
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||| ||||||||| | |||| ||||||| |||||||||||| ||||||||| ||| ||| |   |||  ||||| ||||  ||||||||| ||||||||    
T  7185 gatgattttgagtgactgaatatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggatttttgagtgaaaaa 7086  T
Q  159 ggtgaagttcccgagagcaccc 180  Q
      | ||||||||||||||||||    
T  7085 tatcaagttcccgagagcaccc 7064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 177
Target Start/End: Complemental strand, 8055 - 7941
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    ||||||||||||||||  ||| | ||||||||||||||||    ||||||||  |||||| |  || | ||||||||||||||| |||||| ||||||||    
T  8055 gatggttttgagtgccttaatatatataagaatgattagg----tttttagatggaaattgaacatagggaagttaaaaatggggtttttgggtgaaaaa 7960  T
Q  159 ggtgaagttcccgagagca 177  Q
     || || ||||||||||||    
T  7959 tgtcaatttcccgagagca 7941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 180
Target Start/End: Complemental strand, 3225 - 3104
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||| ||||||||||| |||| |||| || |||||||||||| ||||||||| ||| ||| |   |||  ||||| ||||  ||||||||| ||||||||    
T  3225 gatgattttgagtgcctgaatatgtacaataatgattaggcaagtttttagattgagattgaacttgggaaagtttaaaaatggatttttgggtgaaaaa 3126  T
Q  159 ggtgaagttcccgagagcaccc 180  Q
     || || |||||||||||||||    
T  3125 tgtcaaattcccgagagcaccc 3104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 180
Target Start/End: Complemental strand, 57378 - 57258
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    ||||||||||||||||  ||  | ||||||||| || ||||| ||||||||| ||||||| |  || | |||||||||||| || |||||| ||||||||    
T  57378 gatggttttgagtgccttaacatatataagaat-atcaggcaagtttttagattgaaattgaacatagggaagttaaaaatagggtttttgggtgaaaaa 57280  T
Q  159 ggtgaagttcccgagagcaccc 180  Q
     || || |||||||||||||||    
T  57279 tgtcaaattcccgagagcaccc 57258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 180
Target Start/End: Complemental strand, 80793 - 80672
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||| ||||||||||| |||  ||||||| |||||||||||| ||||||||| ||| ||| |   |||  ||||| ||||  ||||||||| ||||||||    
T  80793 gatgattttgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggatttttgggtgaaaaa 80694  T
Q  159 ggtgaagttcccgagagcaccc 180  Q
     || || |||||||||||||||    
T  80693 tgtcaaattcccgagagcaccc 80672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1403 (Bit Score: 37; Significance: 0.000000000004; HSPs: 1)
Name: scaffold1403
Description:

Target: scaffold1403; HSP #1
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 64 - 180
Target Start/End: Complemental strand, 1075 - 960
Alignment:
Q  64 ttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaaggtga 163  Q
    ||||||||||| |||||||||||| ||||||||||||  |||||||| ||| ||| |   |||  ||||| ||||  |||||||| ||||||||| || |    
T  1075 ttttgagtgcctgaatgtgtataataatgattaggca-atttttagattgagattgaacctgggaaagtttaaaaatggatttttttgtgaaaaatgtca 977  T
Q  164 agttcccgagagcaccc 180  Q
    | |||||||||||||||    
T  976 aattcccgagagcaccc 960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 37; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 59 - 179
Target Start/End: Complemental strand, 25637 - 25517
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||| ||||||||||| |||  ||||||| |||||||||||| ||||||||| ||| ||| |   |||| ||||| ||||  ||||||||| ||||||||    
T  25637 gatgattttgagtgcctgaaaatgtataataatgattaggcaagtttttagattgagattgaacttggaaaagtttaaaaatggatttttgggtgaaaaa 25538  T
Q  159 ggtgaagttcccgagagcacc 179  Q
     || || || |||||||||||    
T  25537 tgtcaaatttccgagagcacc 25517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 37; Significance: 0.000000000004; HSPs: 2)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 128 - 180
Target Start/End: Complemental strand, 55462 - 55410
Alignment:
Q  128 gaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgagagcaccc 180  Q
    ||||||||||||| |||||||| |||||||| || ||||||||||||||||||    
T  55462 gaagttaaaaatgagatttttgggtgaaaaatgtcaagttcccgagagcaccc 55410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 63 - 177
Target Start/End: Original strand, 52993 - 53107
Alignment:
Q  63 gttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaaggtg 162  Q
    ||||||||||||  ||  ||| || ||||||||||||| ||||||||| | || ||   ||| |||||||||||||| ||||||||| |||||||| ||     
T  52993 gttttgagtgccttaacctgtttaggaatgattaggcatgtttttagattaaatttggatatagagaagttaaaaataggatttttgagtgaaaaatgtc 53092  T
Q  163 aagttcccgagagca 177  Q
    ||  |||||||||||    
T  53093 aaactcccgagagca 53107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 37; Significance: 0.000000000004; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 128 - 176
Target Start/End: Original strand, 39575 - 39623
Alignment:
Q  128 gaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgagagc 176  Q
    |||||||||||||||||||||| |||||||| || ||||||||||||||    
T  39575 gaagttaaaaatgggatttttgggtgaaaaatgtcaagttcccgagagc 39623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 176
Target Start/End: Original strand, 44257 - 44305
Alignment:
Q  128 gaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgagagc 176  Q
    ||||||||||||| |||||||| |||||||| || ||||||||||||||    
T  44257 gaagttaaaaatgagatttttgggtgaaaaatgtcaagttcccgagagc 44305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 180
Target Start/End: Complemental strand, 8628 - 8537
Alignment:
Q  89 aatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgagagcaccc 180  Q
    |||||||||||| ||||||||| ||| ||| ||  |||  ||||| ||||  ||||||||| |||||||| || ||||||||||||||||||    
T  8628 aatgattaggcaagtttttagattgagattgatcctgggaaagtttaaaaatggatttttgagtgaaaaaagtcaagttcccgagagcaccc 8537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 22 - 176
Target Start/End: Complemental strand, 29012 - 28858
Alignment:
Q  22 catgattttgtgaattaacgtggttggtaaagtctttgatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcat 121  Q
    |||||||||||||||||| ||    |||  ||| || ||||||||||||||||  ||   || || ||||||||||||| ||||||||| | || ||       
T  29012 catgattttgtgaattaatgttagaggtcgagttttagatggttttgagtgccttaacccgtttaggaatgattaggcaagtttttagattaaatttagg 28913  T
Q  122 tatggagaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgagagc 176  Q
     || |||||||||||||||||||||||| |||||||| || ||  ||||||||||    
T  28912 catagagaagttaaaaatgggatttttgagtgaaaaatgtcaaactcccgagagc 28858  T

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Target: scaffold0338 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 180
Target Start/End: Original strand, 11177 - 11298
Alignment:
Q  59 gatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    ||||||||||||||||  ||  ||||||||||||||||||||  ||||| ||    ||||    || |||||| |||||||||  |||||| ||||||||    
T  11177 gatggttttgagtgccttaacatgtataagaatgattaggcaaatttttggatcagaattggacatagagaagctaaaaatggtgtttttgggtgaaaaa 11276  T
Q  159 ggtgaagttcccgagagcaccc 180  Q
     || ||||||||||||||||||    
T  11277 tgttaagttcccgagagcaccc 11298  T

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Target: scaffold0859 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 107
Target Start/End: Complemental strand, 4422 - 4338
Alignment:
Q  23 atgattttgtgaattaacgtggttggtaaagtctttgatggttttgagtgccagaatgtgtataagaatgattaggcaggttttt 107  Q
    |||||||||| |||||||||  | ||| |||| ||  |||||||||||||||  ||  |||||||||||||||||||| ||||||    
T  4422 atgattttgtaaattaacgttttgggtcaagttttatatggttttgagtgccttaacatgtataagaatgattaggcaagttttt 4338  T

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Target: scaffold0859; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 176
Target Start/End: Complemental strand, 4311 - 4263
Alignment:
Q  128 gaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgagagc 176  Q
    |||||||||||||||||||||| |||||||| || ||  ||||||||||    
T  4311 gaagttaaaaatgggatttttgagtgaaaaatgtcaaactcccgagagc 4263  T

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Target: scaffold0285 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 176
Target Start/End: Complemental strand, 19343 - 19295
Alignment:
Q  128 gaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgagagc 176  Q
    |||||||||||||||||||||| ||||| || || ||||||||||||||    
T  19343 gaagttaaaaatgggatttttgagtgaataatgtcaagttcccgagagc 19295  T

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Target: scaffold0139 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 179
Target Start/End: Complemental strand, 38820 - 38708
Alignment:
Q  67 tgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaaggtgaagt 166  Q
    |||||||  |||| ||||||| |||||||||||| ||||||||| ||| ||| |   |||  ||||| |||||  |||||||| |||||||| || || |    
T  38820 tgagtgcgtgaatatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaattagatttttgggtgaaaaatgtcaaat 38721  T
Q  167 tcccgagagcacc 179  Q
    |||||||||||||    
T  38720 tcccgagagcacc 38708  T

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Target: scaffold1551 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold1551
Description:

Target: scaffold1551; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 85 - 180
Target Start/End: Original strand, 307 - 402
Alignment:
Q  85 taagaatgattaggcaggtttttagaatgaaattcattatggagaagttaaaaatgggatttttgtgtgaaaaaggtgaagttcccgagagcaccc 180  Q
    |||||| || |||||| |||||||||||||||||     | | | |||||||||||||||||| | ||||||||||| ||||||| ||||| ||||    
T  307 taagaacgagtaggcaagtttttagaatgaaatttgacgtagggtagttaaaaatgggattttggggtgaaaaaggtcaagttccagagagtaccc 402  T

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Target: scaffold0109 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 110
Target Start/End: Original strand, 35541 - 35587
Alignment:
Q  64 ttttgagtgccagaatgtgtataagaatgattaggcaggtttttaga 110  Q
    ||||||||||| |||| ||||||| |||||||||||| |||||||||    
T  35541 ttttgagtgcctgaatatgtataataatgattaggcaagtttttaga 35587  T

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Target: scaffold0003 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 158
Target Start/End: Complemental strand, 96019 - 95887
Alignment:
Q  26 attttgtgaattaacgtggttggtaaagtctttgatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttagaatgaaattcattatg 125  Q
    |||||||||||||| ||    ||| |||| || ||||||||||||||||  ||  ||| || ||||||||||||| |||||| ||   ||||| |  ||     
T  96019 attttgtgaattaatgttagaggtcaagttttagatggttttgagtgccttaacctgtttaggaatgattaggcaagtttttggatcaaaattgaacata 95920  T
Q  126 gagaagttaaaaatgggatttttgtgtgaaaaa 158  Q
    |||||||||| |||| |||||||| ||||||||    
T  95919 gagaagttaagaatgagatttttgagtgaaaaa 95887  T

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Target: scaffold0002 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 110
Target Start/End: Complemental strand, 398233 - 398145
Alignment:
Q  22 catgattttgtgaattaacgtggttggtaaagtctttgatggttttgagtgccagaatgtgtataagaatgattaggcaggtttttaga 110  Q
    |||||||||||||||||| ||    ||| |||| || ||||||||||||||||  ||  ||| || ||||||||||||| |||||||||    
T  398233 catgattttgtgaattaatgttaaaggtcaagttttagatggttttgagtgccttaacctgtttaggaatgattaggcaagtttttaga 398145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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