View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10140A_low_81 (Length: 357)
Name: NF10140A_low_81
Description: NF10140A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10140A_low_81 |
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Alignment Details
Target: chr7 (Bit Score: 306; Significance: 1e-172; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 1 - 348
Target Start/End: Original strand, 33517581 - 33517928
Alignment:
| Q |
1 |
tcatcaaattcggagaaacaaaatttaataatgatttacattgttgttattaaagtgtcctacttaaaatagtttctttgaacactgaatgcagagggct |
100 |
Q |
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| T |
33517581 |
tcattaaattcggagaaacaaaatttaataatgattaacattgttgttattaaagtgtcctacttaaaatagtttctttgaacactgaatgcagagggct |
33517680 |
T |
|
| Q |
101 |
caccaaaaaatttgccgaactaatttctgtattactctatatttggcctgtaaattattcatcatgattgaactatcccgaaatatgaatcagttctttg |
200 |
Q |
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| T |
33517681 |
caccaaaaaatttgccgaactaatttctgtattactctatatttggcctgtaaattattcatcatgattgaactatcccgaaatatgaatcagttctttg |
33517780 |
T |
|
| Q |
201 |
aaatcatattattggttttatacccaatatttatcaatggtttttgcaannnnnnnnnnaaacaattcctagaaaaaataggcttcagaaaataattctt |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
33517781 |
aaatcatattattggttttatacccaatatttatcaatggtttttgcaatttgttttttaaacaattcctagaaaaaataggcttcagaaaataattctt |
33517880 |
T |
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| Q |
301 |
gagcattctaatttaatgttggatcacttggatggttttgatattctt |
348 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
33517881 |
gagcattctactttaatgttggatcacttggatggttttgatattctt |
33517928 |
T |
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