View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10140_2D_low_6 (Length: 407)

Name: NF10140_2D_low_6
Description: NF10140_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10140_2D_low_6
NF10140_2D_low_6
[»] chr5 (43 HSPs)
chr5 (20-271)||(38848772-38849024)
chr5 (20-271)||(39310505-39310756)
chr5 (20-271)||(38750078-38750329)
chr5 (20-268)||(38807406-38807655)
chr5 (45-268)||(38865761-38865985)
chr5 (324-407)||(9113516-9113599)
chr5 (324-407)||(13007443-13007526)
chr5 (324-407)||(6011929-6012012)
chr5 (324-407)||(14726252-14726335)
chr5 (325-407)||(24229576-24229658)
chr5 (335-405)||(38598013-38598083)
chr5 (324-405)||(38007573-38007654)
chr5 (324-407)||(10722975-10723058)
chr5 (324-407)||(34945607-34945690)
chr5 (327-405)||(8096293-8096370)
chr5 (325-407)||(14082188-14082270)
chr5 (335-407)||(25980371-25980443)
chr5 (324-407)||(1409714-1409797)
chr5 (324-407)||(26825644-26825727)
chr5 (324-405)||(13422149-13422229)
chr5 (325-407)||(26877901-26877983)
chr5 (327-403)||(4771075-4771150)
chr5 (325-405)||(35851013-35851093)
chr5 (324-407)||(10332339-10332421)
chr5 (324-407)||(11976726-11976809)
chr5 (74-119)||(22654244-22654289)
chr5 (325-399)||(6217120-6217194)
chr5 (324-369)||(8984780-8984825)
chr5 (324-404)||(11073779-11073857)
chr5 (74-119)||(37328209-37328254)
chr5 (335-370)||(3740757-3740792)
chr5 (335-370)||(9196692-9196727)
chr5 (335-369)||(586166-586200)
chr5 (335-369)||(17331754-17331788)
chr5 (335-369)||(23881777-23881811)
chr5 (335-369)||(34431490-34431524)
chr5 (335-369)||(39531069-39531103)
chr5 (335-369)||(42505074-42505108)
chr5 (324-369)||(177754-177799)
chr5 (338-370)||(4726681-4726713)
chr5 (324-356)||(7886714-7886746)
chr5 (324-360)||(8088004-8088040)
chr5 (325-369)||(41418204-41418247)
[»] chr7 (48 HSPs)
chr7 (324-407)||(28044547-28044630)
chr7 (324-407)||(9977001-9977084)
chr7 (324-405)||(37837250-37837330)
chr7 (325-405)||(12141099-12141179)
chr7 (328-407)||(40993374-40993453)
chr7 (325-407)||(48061639-48061721)
chr7 (335-407)||(8001348-8001420)
chr7 (327-407)||(28407712-28407792)
chr7 (324-407)||(34899398-34899481)
chr7 (340-407)||(39171397-39171464)
chr7 (324-407)||(42978827-42978906)
chr7 (335-404)||(45349601-45349670)
chr7 (335-407)||(46700251-46700323)
chr7 (324-407)||(39328585-39328667)
chr7 (324-407)||(41553227-41553309)
chr7 (324-407)||(48316610-48316686)
chr7 (325-407)||(19404551-19404631)
chr7 (81-163)||(31268165-31268247)
chr7 (324-369)||(17611649-17611694)
chr7 (325-369)||(35261555-35261599)
chr7 (344-407)||(47590528-47590591)
chr7 (335-397)||(25286990-25287052)
chr7 (365-405)||(24770463-24770503)
chr7 (339-371)||(32587207-32587239)
chr7 (335-370)||(8180226-8180261)
chr7 (324-399)||(35664927-35665001)
chr7 (335-370)||(38277222-38277257)
chr7 (335-378)||(44311590-44311633)
chr7 (335-369)||(2623018-2623052)
chr7 (325-399)||(3222897-3222970)
chr7 (335-369)||(4621041-4621075)
chr7 (335-369)||(11833444-11833478)
chr7 (335-369)||(21603884-21603918)
chr7 (335-369)||(21991088-21991122)
chr7 (335-369)||(25854887-25854921)
chr7 (335-369)||(37375717-37375751)
chr7 (335-369)||(37593509-37593543)
chr7 (335-369)||(44482539-44482573)
chr7 (335-369)||(48643487-48643521)
chr7 (325-394)||(3267009-3267078)
chr7 (325-378)||(11344066-11344119)
chr7 (336-369)||(42645081-42645114)
chr7 (324-360)||(1769077-1769113)
chr7 (325-357)||(4999810-4999842)
chr7 (335-371)||(10094864-10094900)
chr7 (337-369)||(15674026-15674058)
chr7 (324-356)||(24770521-24770553)
chr7 (335-371)||(36579002-36579038)
[»] chr2 (61 HSPs)
chr2 (324-407)||(31788681-31788764)
chr2 (324-407)||(5427661-5427744)
chr2 (324-407)||(36942914-36942997)
chr2 (325-405)||(31193129-31193209)
chr2 (324-407)||(4778978-4779061)
chr2 (324-407)||(18763693-18763776)
chr2 (326-405)||(35220555-35220634)
chr2 (324-407)||(37876398-37876481)
chr2 (325-407)||(36692099-36692181)
chr2 (325-407)||(38445391-38445473)
chr2 (327-407)||(12677246-12677326)
chr2 (327-407)||(29173512-29173592)
chr2 (324-407)||(1415782-1415865)
chr2 (335-397)||(11985036-11985098)
chr2 (325-407)||(19062141-19062222)
chr2 (324-405)||(33585527-33585608)
chr2 (324-405)||(33923932-33924013)
chr2 (324-407)||(4041386-4041469)
chr2 (324-407)||(7646703-7646786)
chr2 (325-407)||(4903938-4904020)
chr2 (325-407)||(25508861-25508943)
chr2 (327-407)||(4100560-4100635)
chr2 (324-404)||(7677665-7677745)
chr2 (329-407)||(21612464-21612541)
chr2 (338-399)||(1421908-1421969)
chr2 (338-407)||(30399835-30399904)
chr2 (338-397)||(8809514-8809575)
chr2 (335-401)||(9169060-9169126)
chr2 (324-407)||(37994509-37994591)
chr2 (324-405)||(29279357-29279443)
chr2 (324-366)||(41328005-41328047)
chr2 (325-369)||(30923250-30923294)
chr2 (335-378)||(6358673-6358716)
chr2 (335-370)||(7071436-7071471)
chr2 (335-378)||(27096107-27096149)
chr2 (324-407)||(27097208-27097282)
chr2 (335-369)||(3527412-3527446)
chr2 (335-369)||(4739755-4739789)
chr2 (324-378)||(12553961-12554015)
chr2 (335-369)||(13878670-13878704)
chr2 (335-369)||(14018795-14018829)
chr2 (335-369)||(16136504-16136538)
chr2 (335-369)||(20560794-20560828)
chr2 (325-404)||(24461671-24461746)
chr2 (335-369)||(25068267-25068301)
chr2 (335-369)||(29543219-29543253)
chr2 (335-369)||(31908478-31908512)
chr2 (335-369)||(32015679-32015713)
chr2 (335-369)||(33012474-33012508)
chr2 (335-369)||(35333931-35333965)
chr2 (335-369)||(43696294-43696328)
chr2 (335-369)||(44942712-44942746)
chr2 (324-369)||(9374337-9374382)
chr2 (325-378)||(14416420-14416473)
chr2 (324-369)||(26491706-26491750)
chr2 (325-378)||(27865174-27865227)
chr2 (324-369)||(32448409-32448454)
chr2 (329-374)||(37416978-37417023)
chr2 (338-370)||(13268976-13269008)
chr2 (335-378)||(28871582-28871623)
chr2 (338-378)||(40125782-40125821)
[»] chr8 (50 HSPs)
chr8 (325-407)||(16928547-16928629)
chr8 (324-407)||(7883030-7883113)
chr8 (327-407)||(33214463-33214543)
chr8 (324-407)||(30568110-30568193)
chr8 (324-397)||(40618862-40618935)
chr8 (325-404)||(9637199-9637278)
chr8 (324-407)||(17693402-17693485)
chr8 (335-405)||(41684592-41684662)
chr8 (324-404)||(3673661-3673741)
chr8 (326-407)||(40211091-40211174)
chr8 (324-407)||(23230860-23230943)
chr8 (324-395)||(28086601-28086672)
chr8 (324-407)||(31013397-31013480)
chr8 (326-405)||(45445602-45445681)
chr8 (339-407)||(27498170-27498238)
chr8 (324-407)||(8412311-8412394)
chr8 (324-407)||(24099046-24099128)
chr8 (335-407)||(25190865-25190937)
chr8 (324-407)||(21238005-21238087)
chr8 (324-407)||(3240597-3240681)
chr8 (324-407)||(37971500-37971587)
chr8 (325-407)||(7677071-7677155)
chr8 (325-405)||(16247014-16247095)
chr8 (325-375)||(19443843-19443893)
chr8 (342-407)||(7198003-7198067)
chr8 (342-407)||(24186468-24186533)
chr8 (324-407)||(15344525-15344609)
chr8 (324-407)||(15433590-15433674)
chr8 (324-407)||(15524894-15524978)
chr8 (324-407)||(1236487-1236569)
chr8 (335-370)||(4757573-4757608)
chr8 (339-370)||(12111013-12111044)
chr8 (335-378)||(20227077-20227120)
chr8 (324-378)||(470936-470990)
chr8 (335-369)||(1809907-1809941)
chr8 (335-369)||(2234139-2234173)
chr8 (335-369)||(2968941-2968975)
chr8 (335-369)||(9501994-9502028)
chr8 (324-366)||(10377932-10377974)
chr8 (328-366)||(15596946-15596984)
chr8 (335-369)||(24790839-24790873)
chr8 (335-369)||(31202874-31202908)
chr8 (335-369)||(41362159-41362193)
chr8 (325-378)||(8868065-8868118)
chr8 (336-369)||(11162312-11162345)
chr8 (325-378)||(34102513-34102566)
chr8 (325-378)||(34610093-34610146)
chr8 (338-370)||(6833742-6833774)
chr8 (324-356)||(27746889-27746921)
chr8 (338-370)||(32413194-32413226)
[»] chr4 (50 HSPs)
chr4 (325-407)||(56040438-56040520)
chr4 (324-407)||(19853303-19853386)
chr4 (325-407)||(2521014-2521096)
chr4 (325-407)||(26633463-26633545)
chr4 (324-405)||(21686033-21686114)
chr4 (324-407)||(13634350-13634433)
chr4 (324-407)||(32766749-32766832)
chr4 (335-407)||(48257434-48257506)
chr4 (324-407)||(4142555-4142638)
chr4 (327-407)||(43510431-43510511)
chr4 (324-407)||(17949114-17949198)
chr4 (324-407)||(17952966-17953050)
chr4 (335-407)||(24098871-24098943)
chr4 (324-407)||(53444353-53444437)
chr4 (324-399)||(10258692-10258767)
chr4 (325-407)||(52978979-52979061)
chr4 (325-407)||(35348542-35348626)
chr4 (325-404)||(21662675-21662754)
chr4 (325-404)||(21671439-21671518)
chr4 (341-407)||(29960757-29960823)
chr4 (335-407)||(10496570-10496643)
chr4 (325-407)||(22611418-22611507)
chr4 (324-407)||(36204171-36204253)
chr4 (324-378)||(6155000-6155054)
chr4 (327-407)||(28857636-28857715)
chr4 (324-383)||(44596918-44596977)
chr4 (324-407)||(53811262-53811336)
chr4 (335-407)||(43095863-43095940)
chr4 (324-360)||(9048956-9048992)
chr4 (355-407)||(26090732-26090784)
chr4 (326-378)||(43853718-43853770)
chr4 (335-370)||(7060739-7060774)
chr4 (335-370)||(8517120-8517155)
chr4 (335-370)||(29266565-29266600)
chr4 (325-360)||(56156440-56156475)
chr4 (335-369)||(6882370-6882404)
chr4 (335-369)||(7084368-7084402)
chr4 (335-369)||(13965969-13966003)
chr4 (335-369)||(14346836-14346870)
chr4 (335-369)||(24826065-24826099)
chr4 (335-369)||(31522372-31522406)
chr4 (335-369)||(38435003-38435037)
chr4 (335-369)||(42197979-42198013)
chr4 (335-369)||(45350731-45350765)
chr4 (335-369)||(45360210-45360244)
chr4 (325-378)||(37465748-37465801)
chr4 (335-368)||(43244042-43244075)
chr4 (335-371)||(7273607-7273643)
chr4 (338-370)||(24611462-24611494)
chr4 (324-356)||(52097690-52097722)
[»] chr6 (36 HSPs)
chr6 (324-405)||(32327011-32327092)
chr6 (324-405)||(33052959-33053040)
chr6 (325-405)||(12170686-12170766)
chr6 (324-407)||(606420-606503)
chr6 (324-407)||(3913365-3913448)
chr6 (324-407)||(9341442-9341525)
chr6 (327-407)||(34018776-34018856)
chr6 (327-405)||(21426480-21426558)
chr6 (327-407)||(29255240-29255320)
chr6 (335-407)||(30894814-30894886)
chr6 (324-407)||(67792-67875)
chr6 (324-407)||(14174862-14174945)
chr6 (324-407)||(14179398-14179481)
chr6 (324-407)||(29319668-29319751)
chr6 (324-405)||(7514994-7515074)
chr6 (339-407)||(23128834-23128902)
chr6 (325-404)||(31297039-31297117)
chr6 (324-407)||(32060092-32060175)
chr6 (335-405)||(30608317-30608387)
chr6 (324-407)||(30493748-30493831)
chr6 (325-407)||(34185486-34185567)
chr6 (325-405)||(28981395-28981474)
chr6 (325-405)||(127885-127963)
chr6 (335-369)||(4660854-4660888)
chr6 (335-369)||(5146352-5146386)
chr6 (327-369)||(11321338-11321380)
chr6 (335-369)||(12653979-12654013)
chr6 (335-369)||(15589786-15589820)
chr6 (335-369)||(19402513-19402547)
chr6 (335-369)||(23654675-23654709)
chr6 (335-369)||(30813483-30813517)
chr6 (337-370)||(4394195-4394228)
chr6 (378-407)||(6957357-6957386)
chr6 (325-366)||(19164821-19164862)
chr6 (338-370)||(5545084-5545116)
chr6 (337-369)||(6127943-6127975)
[»] chr3 (62 HSPs)
chr3 (327-407)||(45568239-45568319)
chr3 (324-407)||(6954487-6954570)
chr3 (324-407)||(52922908-52922991)
chr3 (325-407)||(46304313-46304394)
chr3 (324-405)||(43017104-43017185)
chr3 (324-407)||(21313250-21313333)
chr3 (325-407)||(36461229-36461311)
chr3 (324-405)||(9797325-9797406)
chr3 (335-404)||(54149208-54149277)
chr3 (324-407)||(10108450-10108533)
chr3 (324-407)||(21533600-21533683)
chr3 (324-407)||(36910557-36910640)
chr3 (324-407)||(47896365-47896448)
chr3 (325-407)||(9998681-9998763)
chr3 (326-407)||(48650527-48650608)
chr3 (325-405)||(40487541-40487621)
chr3 (324-407)||(10229690-10229773)
chr3 (324-407)||(33580094-33580177)
chr3 (324-407)||(38546013-38546096)
chr3 (328-407)||(43488386-43488464)
chr3 (340-407)||(44959780-44959847)
chr3 (324-407)||(47041839-47041922)
chr3 (327-401)||(37040988-37041062)
chr3 (325-407)||(40556916-40556998)
chr3 (335-407)||(7448716-7448788)
chr3 (335-407)||(7456858-7456930)
chr3 (339-407)||(31271638-31271706)
chr3 (324-407)||(21431827-21431912)
chr3 (324-405)||(10233286-10233367)
chr3 (324-407)||(4711696-4711779)
chr3 (325-407)||(14859704-14859791)
chr3 (324-398)||(20464756-20464835)
chr3 (325-380)||(23799740-23799794)
chr3 (324-405)||(12050439-12050520)
chr3 (324-407)||(20608689-20608777)
chr3 (324-407)||(628715-628797)
chr3 (341-407)||(18011234-18011300)
chr3 (325-407)||(35175618-35175699)
chr3 (325-407)||(50194128-50194209)
chr3 (325-366)||(953337-953378)
chr3 (325-397)||(35864753-35864830)
chr3 (325-369)||(24396291-24396335)
chr3 (335-370)||(55455287-55455322)
chr3 (335-369)||(1074563-1074597)
chr3 (335-369)||(2192504-2192538)
chr3 (335-369)||(11819510-11819544)
chr3 (325-399)||(12149575-12149649)
chr3 (335-369)||(13701671-13701705)
chr3 (335-369)||(14585888-14585922)
chr3 (335-369)||(19645616-19645650)
chr3 (335-369)||(24483365-24483399)
chr3 (335-369)||(48401518-48401552)
chr3 (335-369)||(49627773-49627807)
chr3 (335-369)||(50981135-50981169)
chr3 (335-369)||(51084269-51084303)
chr3 (335-369)||(54706401-54706435)
chr3 (335-369)||(55090368-55090402)
chr3 (324-369)||(33076690-33076734)
chr3 (338-370)||(20200736-20200768)
chr3 (338-370)||(20202918-20202950)
chr3 (325-369)||(41818478-41818522)
chr3 (325-357)||(47733369-47733401)
[»] chr1 (52 HSPs)
chr1 (324-407)||(49504386-49504469)
chr1 (325-407)||(11462274-11462356)
chr1 (324-397)||(26535564-26535637)
chr1 (335-407)||(51373660-51373732)
chr1 (324-407)||(7337454-7337537)
chr1 (324-407)||(8211098-8211181)
chr1 (324-407)||(29738456-29738538)
chr1 (325-407)||(4413332-4413414)
chr1 (325-407)||(21687596-21687678)
chr1 (324-405)||(44915859-44915940)
chr1 (335-407)||(35484193-35484265)
chr1 (325-404)||(10776253-10776332)
chr1 (324-407)||(34878069-34878152)
chr1 (324-406)||(32395216-32395298)
chr1 (324-404)||(50377544-50377624)
chr1 (327-406)||(940457-940536)
chr1 (324-407)||(39888400-39888483)
chr1 (324-405)||(45415778-45415859)
chr1 (324-399)||(47133129-47133203)
chr1 (325-407)||(19596252-19596334)
chr1 (335-407)||(21947420-21947492)
chr1 (335-403)||(23289194-23289262)
chr1 (325-389)||(36894200-36894264)
chr1 (340-407)||(1742505-1742572)
chr1 (324-407)||(15431458-15431540)
chr1 (328-407)||(16989589-16989668)
chr1 (324-395)||(32678935-32679005)
chr1 (324-397)||(27456712-27456790)
chr1 (338-407)||(13144618-13144686)
chr1 (325-404)||(3228490-3228572)
chr1 (325-405)||(14872859-14872939)
chr1 (339-407)||(27579934-27580002)
chr1 (324-407)||(12635388-12635470)
chr1 (327-407)||(24583168-24583247)
chr1 (325-369)||(33486687-33486731)
chr1 (335-370)||(12872031-12872066)
chr1 (335-378)||(40163232-40163275)
chr1 (335-369)||(4882038-4882072)
chr1 (324-358)||(5685687-5685721)
chr1 (335-369)||(13152853-13152887)
chr1 (65-118)||(15830048-15830102)
chr1 (65-118)||(15831776-15831830)
chr1 (65-118)||(15833503-15833557)
chr1 (335-369)||(25032764-25032798)
chr1 (335-369)||(29205694-29205728)
chr1 (335-369)||(44517574-44517608)
chr1 (335-407)||(31984379-31984449)
chr1 (324-369)||(41081478-41081523)
chr1 (324-356)||(5984085-5984117)
chr1 (327-407)||(24583364-24583443)
chr1 (327-407)||(35461846-35461928)
chr1 (73-101)||(46627271-46627299)
[»] scaffold0026 (1 HSPs)
scaffold0026 (324-407)||(71661-71744)
[»] scaffold0136 (2 HSPs)
scaffold0136 (325-407)||(9834-9916)
scaffold0136 (325-407)||(38270-38357)
[»] scaffold0121 (1 HSPs)
scaffold0121 (325-406)||(31066-31147)
[»] scaffold0127 (1 HSPs)
scaffold0127 (324-407)||(15707-15790)
[»] scaffold0884 (1 HSPs)
scaffold0884 (325-407)||(1765-1847)
[»] scaffold0445 (2 HSPs)
scaffold0445 (353-407)||(1559-1613)
scaffold0445 (324-356)||(1638-1670)
[»] scaffold0050 (1 HSPs)
scaffold0050 (325-407)||(65834-65916)
[»] scaffold0049 (1 HSPs)
scaffold0049 (325-399)||(71092-71166)
[»] scaffold0154 (1 HSPs)
scaffold0154 (327-407)||(25496-25576)
[»] scaffold0017 (1 HSPs)
scaffold0017 (348-407)||(32562-32621)
[»] scaffold0009 (1 HSPs)
scaffold0009 (325-399)||(57881-57954)
[»] scaffold0603 (1 HSPs)
scaffold0603 (324-378)||(7971-8025)
[»] scaffold0042 (1 HSPs)
scaffold0042 (325-407)||(92289-92370)
[»] scaffold0039 (1 HSPs)
scaffold0039 (324-369)||(53192-53237)
[»] scaffold0219 (1 HSPs)
scaffold0219 (341-405)||(14679-14743)
[»] scaffold0113 (1 HSPs)
scaffold0113 (324-367)||(36464-36507)
[»] scaffold0754 (1 HSPs)
scaffold0754 (65-118)||(3821-3875)
[»] scaffold0634 (1 HSPs)
scaffold0634 (325-399)||(8736-8810)
[»] scaffold0563 (2 HSPs)
scaffold0563 (65-118)||(671-725)
scaffold0563 (65-118)||(10353-10407)
[»] scaffold0543 (1 HSPs)
scaffold0543 (65-118)||(76-130)
[»] scaffold0536 (1 HSPs)
scaffold0536 (335-369)||(3321-3355)
[»] scaffold0492 (1 HSPs)
scaffold0492 (65-118)||(713-767)
[»] scaffold0294 (1 HSPs)
scaffold0294 (335-369)||(3728-3762)
[»] scaffold0155 (1 HSPs)
scaffold0155 (335-369)||(35501-35535)
[»] scaffold0024 (1 HSPs)
scaffold0024 (338-370)||(36928-36960)


Alignment Details
Target: chr5 (Bit Score: 165; Significance: 4e-88; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 20 - 271
Target Start/End: Complemental strand, 38849024 - 38848772
Alignment:
Q  20 gatggaacatggttgatgcttaagaggttggactgtaggatacactatgctggc-tgcccgctccaagttgagagttgggccatgggatttgggtgaagg 118  Q
    |||||||||||| ||   ||||| ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | || |||||    
T  38849024 gatggaacatggctgtgtcttaacaggttgggctgtaggatacactatgctggcctgcccgctccaagttgagagttgggccatgggatcttggcgaagg 38848925  T
Q  119 ctcaggtctcctggtcattagaatggagggatccgcatgaggttggtttcatagagcagggaacacttccttctcttgacaatggagggatcacatgctg 218  Q
    | ||| ||||||||||  |||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||| ||||||||||||| ||||    
T  38848924 cacagatctcctggtccctagaatggagggatccgcatgaggctggtttcacagagcagtgaacacttccttctcttgacagtggagggatcacaggctg 38848825  T
Q  219 ctgtattctcagcccatatggcctggtgagcctagtccattgaaccatcattt 271  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  38848824 ctgtattctcagcccgtatggcctggtgagcctagcccattgaaccatcattt 38848772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 20 - 271
Target Start/End: Complemental strand, 39310756 - 39310505
Alignment:
Q  20 gatggaacatggttgatgcttaagaggttggactgtaggatacactatgctggc-tgcccgctccaagttgagagttgggccatgggatttgggtgaagg 118  Q
    ||||||||||| |||   ||||| ||||||| ||||||| |||| ||||||||| ||||| ||||||||||||||||||||||||||||||||| |||||    
T  39310756 gatggaacatgattgtgtcttaacaggttgggctgtagggtacattatgctggcctgcccactccaagttgagagttgggccatgggatttgggcgaagg 39310657  T
Q  119 ctcaggtctcctggtcattagaatggagggatccgcatgaggttggtttcatagagcagggaacacttccttctcttgacaatggagggatcacatgctg 218  Q
    ||||| ||||||||||| ||||| |||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||| ||||||||||||| ||||    
T  39310656 ctcagatctcctggtcactagaacggagggatccgcatgaggctggtttcacagagcagtgaacacttccttctcttgacagtggagggatcacaggctg 39310557  T
Q  219 ctgtattctcagcccatatggcctggtgagcctagtccattgaaccatcattt 271  Q
    | ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  39310556 cagtattctcagcccatatggcctggtgagcctag-ccattgaaccatcattt 39310505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 20 - 271
Target Start/End: Original strand, 38750078 - 38750329
Alignment:
Q  20 gatggaacatggttgatgcttaagaggttggactgtaggatacactatgctggc-tgcccgctccaagttgagagttgggccatgggatttgggtgaagg 118  Q
    |||||||||||| ||   ||||| ||||||| ||||||| |||| ||||||||| ||||| ||||||||||||||||||||||||||||||||| |||||    
T  38750078 gatggaacatggctgtgtcttaacaggttgggctgtagggtacattatgctggcctgcccactccaagttgagagttgggccatgggatttgggcgaagg 38750177  T
Q  119 ctcaggtctcctggtcattagaatggagggatccgcatgaggttggtttcatagagcagggaacacttccttctcttgacaatggagggatcacatgctg 218  Q
    ||||| ||||||||||| ||||| |||||||||||||||||| |||||||| ||||||| || |||||||||||||||||| ||||||||| ||| ||||    
T  38750178 ctcagatctcctggtcactagaacggagggatccgcatgaggctggtttcacagagcagtgatcacttccttctcttgacagtggagggattacaggctg 38750277  T
Q  219 ctgtattctcagcccatatggcctggtgagcctagtccattgaaccatcattt 271  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  38750278 ctgtattctcagcccata-ggcctggtgagcctagtccattgaaccatcattt 38750329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 20 - 268
Target Start/End: Original strand, 38807406 - 38807655
Alignment:
Q  20 gatggaacatggttgatgcttaagaggttggactgtaggatacactatgctggct-gcccgctccaagttgagagttgggccatgggatttgggtgaagg 118  Q
    |||||||||||| ||   ||||| ||||||| ||||||| ||||||| ||||||| |||| ||||||||||||||||||||||||||||||||| |||||    
T  38807406 gatggaacatggctgtgtcttaacaggttgggctgtagggtacactaagctggcttgcccactccaagttgagagttgggccatgggatttgggcgaagg 38807505  T
Q  119 ctcaggtctcctggtcattagaatggagggatccgcatgaggttggtttcatagagcagggaacacttccttctcttgacaatggagggatcacatgctg 218  Q
    ||||||||||||||||  ||||| ||||||| |||||||||| |||||||| ||||||| |||||||||||||||| |||| ||||||||| ||| ||||    
T  38807506 ctcaggtctcctggtccctagaacggagggaaccgcatgaggctggtttcacagagcagtgaacacttccttctctcgacagtggagggattacaggctg 38807605  T
Q  219 ctgtattctcagcccatatggcctggtgagcctagtccattgaaccatca 268  Q
    ||| |||||| | |||||| ||||||||||||||| ||||||||||||||    
T  38807606 ctgcattctcggtccatatagcctggtgagcctagcccattgaaccatca 38807655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 45 - 268
Target Start/End: Complemental strand, 38865985 - 38865761
Alignment:
Q  45 ggttggactgtaggatacactatgctggc-tgcccgctccaagttgagagttgggccatgggatttgggtgaaggctcaggtctcctggtcattagaatg 143  Q
    |||||| ||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||    
T  38865985 ggttgggctgtagggtacactatgctggcctgcccactccaagttgagagttgggccatgggatttgggcgaaggctcagatctcctggtcactagaatg 38865886  T
Q  144 gagggatccgcatgaggttggtttcatagagcagggaacacttccttctcttgacaatggagggatcacatgctgctgtattctcagcccatatggcctg 243  Q
    ||||||||||||||||| |||||| | ||||||| ||||||||||||||||||||| ||||||||||||| ||||| |||||||  ||  ||||||||||    
T  38865885 gagggatccgcatgaggctggttttacagagcagtgaacacttccttctcttgacagtggagggatcacaggctgcagtattcttggcttatatggcctg 38865786  T
Q  244 gtgagcctagtccattgaaccatca 268  Q
    ||||||||||  || ||||||||||    
T  38865785 gtgagcctagcacactgaaccatca 38865761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 324 - 407
Target Start/End: Original strand, 9113516 - 9113599
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||| |||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  9113516 gacaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacatcgctaaaaacgtaaagggtgaatct 9113599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 324 - 407
Target Start/End: Complemental strand, 13007526 - 13007443
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||| |||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||    
T  13007526 gacaaaaacaaaacgatattcattcattcaaattgatagagtacatcaaatacaaacatcgctaaaaacgtaaagggtgaatct 13007443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 324 - 407
Target Start/End: Original strand, 6011929 - 6012012
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||| |||||||||||||||||||||| ||| |||||||| |||||||||||||| ||||||||||||||||||||||    
T  6011929 gacaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacatcgttaaaaacgtaaagggtgaatct 6012012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 324 - 407
Target Start/End: Original strand, 14726252 - 14726335
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||| |||||||||||||||||||||| ||| || ||||| ||||||||||||| |||||||||||||||||||||||    
T  14726252 gacaaaaacaaaacgatattcattcattcaaatcgatagattacatcagatacaaacatcactaaaaacgtaaagggtgaatct 14726335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 325 - 407
Target Start/End: Original strand, 24229576 - 24229658
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    ||||||||| |||||||||||||||||||||| ||| |||||||| ||||| |||||||||||||||||||||| ||||||||    
T  24229576 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatataaacatcgctaaaaacgtaaagagtgaatct 24229658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 335 - 405
Target Start/End: Complemental strand, 38598083 - 38598013
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaat 405  Q
    |||| ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  38598083 aacgttattcattcattcaaattgatagagtacatcagatacaaacatcgctaaaaacgtaaagggtgaat 38598013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 324 - 405
Target Start/End: Complemental strand, 38007654 - 38007573
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaat 405  Q
    |||||||||| |||||||||||||||||||||| ||| || ||||| ||||||||||||||||||||||||||| |||||||    
T  38007654 gacaaaaacaaaacgatattcattcattcaaatcgatagattacatcagatacaaacatcgctaaaaacgtaaaaggtgaat 38007573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 324 - 407
Target Start/End: Complemental strand, 10723058 - 10722975
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||| | ||||||| ||||||||||| ||||| |||||||||    
T  10723058 gacaaaaacaaaacgatatttattcattcaaattgatcgagtacatcaaatacaaatatcgctaaaaatgtaaatggtgaatct 10722975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 324 - 407
Target Start/End: Complemental strand, 34945690 - 34945607
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||| | |||||||||| |||||| |||| ||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  34945690 gacaaaaataaaacgatattctttcattaaaatcgatagagtacatcagatacaaacatcgctaaaaacgtaaagggtgaatct 34945607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 327 - 405
Target Start/End: Original strand, 8096293 - 8096370
Alignment:
Q  327 aaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaat 405  Q
    ||||||| |||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||| |||||||||||||    
T  8096293 aaaaacaaaacgatattcattcattcaaatcgatagagtacat-agatacaaacatcgctaaaaatgtaaagggtgaat 8096370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 325 - 407
Target Start/End: Original strand, 14082188 - 14082270
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    ||||||||| |||||||| ||||||||||||| ||| ||| |||| |||||||||||||||||||||| ||||||||||||||    
T  14082188 acaaaaacaaaacgatatccattcattcaaatcgatagagcacatcagatacaaacatcgctaaaaacataaagggtgaatct 14082270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 335 - 407
Target Start/End: Complemental strand, 25980443 - 25980371
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||||||||||||||| ||| ||||| || |||| ||||||||||||||||||||||||||||||||    
T  25980443 aacgatattcattcattcaaatcgatagagtatatcagatgcaaacatcgctaaaaacgtaaagggtgaatct 25980371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 324 - 407
Target Start/End: Complemental strand, 1409797 - 1409714
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||| ||||||||||||| |||||||||| | |||||||| |||||||||||||||||||||| |||| | |||||||    
T  1409797 gacaaaaacaaaacgatattcatttattcaaattggtagagtacatcagatacaaacatcgctaaaaacataaaagctgaatct 1409714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 324 - 407
Target Start/End: Complemental strand, 26825727 - 26825644
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||| | |||||||||||||||||||||| ||| ||||| || | |||||||||| ||||||||||||||||||||||||    
T  26825727 gacaaaaataaaacgatattcattcattcaaatcgatagagtatatcaaatacaaacatagctaaaaacgtaaagggtgaatct 26825644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 324 - 405
Target Start/End: Complemental strand, 13422229 - 13422149
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaat 405  Q
    |||||||||| || ||||||||||||||||||||||| || ||||| | ||||||||||||||||||||||||||| |||||    
T  13422229 gacaaaaacaaaatgatattcattcattcaaattgataga-tacatcatatacaaacatcgctaaaaacgtaaaggatgaat 13422149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 325 - 407
Target Start/End: Original strand, 26877901 - 26877983
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||| || |||||||||||||||||| ||||||| |||||||| | |||||||||| | |||||||||||||| |||||||    
T  26877901 acaaaatcaaaacgatattcattcattcgaattgatagagtacatcatatacaaacattggtaaaaacgtaaaggatgaatct 26877983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 327 - 403
Target Start/End: Complemental strand, 4771150 - 4771075
Alignment:
Q  327 aaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtga 403  Q
    ||||||| |||||||||||||||||||||||||| ||||| | |||||||||| ||| |||| ||||||||||||||    
T  4771150 aaaaacaaaacgatattcattcattcaaattgatagagtata-tagatacaaatatcactaagaacgtaaagggtga 4771075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 325 - 405
Target Start/End: Complemental strand, 35851093 - 35851013
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaat 405  Q
    ||||||||| || |||||||||||||||||||  || || || || ||||||||||||||||||||||||||| |||||||    
T  35851093 acaaaaacaaaatgatattcattcattcaaatcaatagattatatcagatacaaacatcgctaaaaacgtaaaaggtgaat 35851013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 324 - 407
Target Start/End: Original strand, 10332339 - 10332421
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||| ||| |||| ||||||||||||||||| || ||||| ||| |  |||||||||||||||||||||| |||||||    
T  10332339 gacaaaaacaaaacaatatccattcattcaaattgatagaatacatcaga-atcaacatcgctaaaaacgtaaaggatgaatct 10332421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 324 - 407
Target Start/End: Original strand, 11976726 - 11976809
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||| | || |||||| ||||||| |||||||| || ||||| |||| |||||||||||||||| ||||||| |||||||    
T  11976726 gacaaaaataaaatgatattaattcattaaaattgatagattacatcagatgcaaacatcgctaaaaatgtaaaggatgaatct 11976809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 74 - 119
Target Start/End: Original strand, 22654244 - 22654289
Alignment:
Q  74 tgcccgctccaagttgagagttgggccatgggatttgggtgaaggc 119  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||    
T  22654244 tgcccgctccaagttgagagttgggccacgggatttgggcgaaggc 22654289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 325 - 399
Target Start/End: Complemental strand, 6217194 - 6217120
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagg 399  Q
    ||||||| | ||||||||||||||||||||||||||  ||| ||| | |||||||| || ||||||||| |||||    
T  6217194 acaaaaataaaacgatattcattcattcaaattgatatagtgcatcaaatacaaacgtcactaaaaacgcaaagg 6217120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 8984780 - 8984825
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||| |||||||||||||||||||||||||| || |||||    
T  8984780 gacaaaaacaaaacgatattcattcattcaaattgatagaatacat 8984825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 324 - 404
Target Start/End: Original strand, 11073779 - 11073857
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaa 404  Q
    |||||||| | || |||||||||||||||||||  || |||||||| | |||||||||||||| |||| ||||| ||||||    
T  11073779 gacaaaaataaaatgatattcattcattcaaat--atagagtacatcatatacaaacatcgctcaaaatgtaaatggtgaa 11073857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 74 - 119
Target Start/End: Complemental strand, 37328254 - 37328209
Alignment:
Q  74 tgcccgctccaagttgagagttgggccatgggatttgggtgaaggc 119  Q
    ||||| |||||||||||||||||||||| |||||||||| ||||||    
T  37328254 tgccctctccaagttgagagttgggccacgggatttgggcgaaggc 37328209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 335 - 370
Target Start/End: Complemental strand, 3740792 - 3740757
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacatt 370  Q
    |||||||||||||||||||||||||| |||||||||    
T  3740792 aacgatattcattcattcaaattgatagagtacatt 3740757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 335 - 370
Target Start/End: Original strand, 9196692 - 9196727
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacatt 370  Q
    |||||||||||||||||||||||||| |||||||||    
T  9196692 aacgatattcattcattcaaattgatagagtacatt 9196727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Complemental strand, 586200 - 586166
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  586200 aacgatattcattcattcaaattgatagagtacat 586166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Complemental strand, 17331788 - 17331754
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  17331788 aacgatattcattcattcaaattgatagagtacat 17331754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Original strand, 23881777 - 23881811
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  23881777 aacgatattcattcattcaaattgatagagtacat 23881811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Complemental strand, 34431524 - 34431490
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  34431524 aacgatattcattcattcaaattgatagagtacat 34431490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Original strand, 39531069 - 39531103
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  39531069 aacgatattcattcattcaaattgatagagtacat 39531103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Original strand, 42505074 - 42505108
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  42505074 aacgatattcattcattcaaattgatagagtacat 42505108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 177754 - 177799
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||| | || ||||||||||||||||||||||| ||||||||    
T  177754 gacaaaaaaaaaatgatattcattcattcaaattgatggagtacat 177799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 4726681 - 4726713
Alignment:
Q  338 gatattcattcattcaaattgatcgagtacatt 370  Q
    ||||||||||||||||||||||| |||||||||    
T  4726681 gatattcattcattcaaattgatagagtacatt 4726713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 356
Target Start/End: Original strand, 7886714 - 7886746
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaat 356  Q
    |||||||||| ||||||||||||||||||||||    
T  7886714 gacaaaaacaaaacgatattcattcattcaaat 7886746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 360
Target Start/End: Original strand, 8088004 - 8088040
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgat 360  Q
    |||||||||| || |||||||||||||||||||||||    
T  8088004 gacaaaaacaaaatgatattcattcattcaaattgat 8088040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 369
Target Start/End: Original strand, 41418204 - 41418247
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacat 369  Q
    ||||||||| ||||||||| |||||||||||||||| ||||||||    
T  41418204 acaaaaacaaaacgatatt-attcattcaaattgatagagtacat 41418247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 68; Significance: 3e-30; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 324 - 407
Target Start/End: Original strand, 28044547 - 28044630
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||| |||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  28044547 gacaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacatcgctaaaaacgtaaagggtgaatct 28044630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 324 - 407
Target Start/End: Original strand, 9977001 - 9977084
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||| ||||||||||||||||| |||||||| |||||||| |||||||||||| ||||||||||||||||||||||||    
T  9977001 gacaaaaacaaaacgatattcattcatttaaattgatagagtacatcagatacaaacattgctaaaaacgtaaagggtgaatct 9977084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 324 - 405
Target Start/End: Original strand, 37837250 - 37837330
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaat 405  Q
    |||||||||| |||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||    
T  37837250 gacaaaaaca-aacgatattcattcattcaaatcgatagagtacatcagatacaaacatcgctaaaaacgtaaagggtgaat 37837330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 325 - 405
Target Start/End: Original strand, 12141099 - 12141179
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaat 405  Q
    ||||||||| |||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||| |||||||    
T  12141099 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacatcgctaaaaacgtaaaaggtgaat 12141179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 40993453 - 40993374
Alignment:
Q  328 aaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||| ||||||||||||||||| |||| ||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  40993453 aaaacaaaacgatattcattcatttaaatcgatagagtacatcagatacaaacatcgctaaaaacgtaaagggtgaatct 40993374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 325 - 407
Target Start/End: Complemental strand, 48061721 - 48061639
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    ||||||||| |||||||||||||||||||||| ||| |||||||| || |||||||||| |||||||||||||||||||||||    
T  48061721 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatcaggtacaaacatctctaaaaacgtaaagggtgaatct 48061639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 335 - 407
Target Start/End: Original strand, 8001348 - 8001420
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||||||||||||||| ||| |||| ||| |||||||||||||||||||||||||||||||||||||    
T  8001348 aacgatattcattcattcaaatcgatagagtgcatcagatacaaacatcgctaaaaacgtaaagggtgaatct 8001420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 327 - 407
Target Start/End: Original strand, 28407712 - 28407792
Alignment:
Q  327 aaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    ||||||| |||||||||||||||||||||||||| |||||||| | |||||||||||||||||||| |||||||| |||||    
T  28407712 aaaaacaaaacgatattcattcattcaaattgatagagtacatcaaatacaaacatcgctaaaaacataaagggtaaatct 28407792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 324 - 407
Target Start/End: Original strand, 34899398 - 34899481
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||| | || |||||| |||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||    
T  34899398 gacaaaaataaaatgatatttattcattcaaattgatagagtacatcaaatacaaacatcgctaaaaacgtaaagggtgaatct 34899481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 340 - 407
Target Start/End: Original strand, 39171397 - 39171464
Alignment:
Q  340 tattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||| |||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  39171397 tatttattcattcaaatcgatagagtacatcagatacaaacatcgctaaaaacgtaaagggtgaatct 39171464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 324 - 407
Target Start/End: Complemental strand, 42978906 - 42978827
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||| |||||||||||    ||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||    
T  42978906 gacaaaaacaaaacgatattca----ttcaaattgatagagtccatcagatacaaacatcgctaaaaacgtaaagggtgaatct 42978827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 335 - 404
Target Start/End: Original strand, 45349601 - 45349670
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaa 404  Q
    ||||||||||||| ||| |||| ||| |||||||| ||||||||| ||||||||||||||||||||||||    
T  45349601 aacgatattcattaatttaaatcgatagagtacatcagatacaaatatcgctaaaaacgtaaagggtgaa 45349670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 335 - 407
Target Start/End: Complemental strand, 46700323 - 46700251
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||||||||||| ||||||| |||||||| || |||||| |||| ||||||| ||||||||||||||    
T  46700323 aacgatattcattcattctaattgatagagtacatcaggtacaaaaatcgttaaaaacataaagggtgaatct 46700251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 324 - 407
Target Start/End: Original strand, 39328585 - 39328667
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||| |||||||||||||||||||||| ||| || ||||| | |||||||||||||| |||||||||| ||| |||||    
T  39328585 gacaaaaacaaaacgatattcattcattcaaatcgatggattacatcaaatacaaacatcgct-aaaacgtaaaaggtaaatct 39328667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 324 - 407
Target Start/End: Original strand, 41553227 - 41553309
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||| ||||||||||||||||||||||| || || ||||| ||| |  |||||| |||||||||||||||||||||||    
T  41553227 gacaaaaacaaaacgatattcattcattcaaattaatagaatacatcaga-atcaacatcactaaaaacgtaaagggtgaatct 41553309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 324 - 407
Target Start/End: Original strand, 48316610 - 48316686
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||| |||||||||||||||||||||| ||| ||||       |||||||||||||||||||| ||||||||||||||    
T  48316610 gacaaaaacaaaacgatattcattcattcaaatcgatagagt-------atacaaacatcgctaaaaacctaaagggtgaatct 48316686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 325 - 407
Target Start/End: Original strand, 19404551 - 19404631
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||| || |||||||| ||||||||||  ||||| |||||||| |||||| |||||||||||||| ||||||| |||||||    
T  19404551 acaaaatcaaaacgatatccattcattca--ttgatagagtacatcagatacgaacatcgctaaaaatgtaaaggatgaatct 19404631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 81 - 163
Target Start/End: Original strand, 31268165 - 31268247
Alignment:
Q  81 tccaagttgagagttgggccatgggatttgggtgaaggctcaggtctcctggtcattagaatggagggatccgcatgaggttg 163  Q
    ||||||||||||||||||| |||| ||||| | |||||| ||  |||| || ||| ||||||||||||||| |||||||||||    
T  31268165 tccaagttgagagttgggctatggaatttgagcgaaggcccaaatctcatgatcactagaatggagggatctgcatgaggttg 31268247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 17611694 - 17611649
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||    
T  17611694 gacaaaaacaaaacgatattcattcattcaaattgatagagtacat 17611649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 325 - 369
Target Start/End: Complemental strand, 35261599 - 35261555
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||    
T  35261599 acaaaaacagaatgatattcattcattcaaattgatagagtacat 35261555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 344 - 407
Target Start/End: Complemental strand, 47590591 - 47590528
Alignment:
Q  344 cattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    ||||||||||||| ||| ||||| || ||||| |||||||||| |||||||||||||| |||||    
T  47590591 cattcattcaaatcgatagagtatatcagatataaacatcgctgaaaacgtaaagggtaaatct 47590528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 335 - 397
Target Start/End: Original strand, 25286990 - 25287052
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaa 397  Q
    ||||||||| |||||||||||||||| |||||||| ||||| ||| |||| |||||| |||||    
T  25286990 aacgatatttattcattcaaattgatagagtacatcagatataaagatcgttaaaaatgtaaa 25287052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 365 - 405
Target Start/End: Complemental strand, 24770503 - 24770463
Alignment:
Q  365 tacattagatacaaacatcgctaaaaacgtaaagggtgaat 405  Q
    ||||| |||||||||||||||||| ||||||||||||||||    
T  24770503 tacatcagatacaaacatcgctaacaacgtaaagggtgaat 24770463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 339 - 371
Target Start/End: Original strand, 32587207 - 32587239
Alignment:
Q  339 atattcattcattcaaattgatcgagtacatta 371  Q
    |||||||||||||||||||||||||||||||||    
T  32587207 atattcattcattcaaattgatcgagtacatta 32587239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 335 - 370
Target Start/End: Complemental strand, 8180261 - 8180226
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacatt 370  Q
    |||||||||||||||||||||||||| |||||||||    
T  8180261 aacgatattcattcattcaaattgatagagtacatt 8180226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 324 - 399
Target Start/End: Original strand, 35664927 - 35665001
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagg 399  Q
    |||||||||| ||| ||||| ||||||| |||||||  || |||||||||  ||| ||||||||||||||||||||    
T  35664927 gacaaaaacaaaacaatatttattcatttaaattgagagaatacattagaatcaa-catcgctaaaaacgtaaagg 35665001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 335 - 370
Target Start/End: Complemental strand, 38277257 - 38277222
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacatt 370  Q
    |||||||||||||||||||||||||| |||||||||    
T  38277257 aacgatattcattcattcaaattgatagagtacatt 38277222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 335 - 378
Target Start/End: Original strand, 44311590 - 44311633
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacattagatacaa 378  Q
    |||||||||||||| ||||||||||| |||| ||||||||||||    
T  44311590 aacgatattcattcgttcaaattgatagagtgcattagatacaa 44311633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Complemental strand, 2623052 - 2623018
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  2623052 aacgatattcattcattcaaattgatagagtacat 2623018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 399
Target Start/End: Original strand, 3222897 - 3222970
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagg 399  Q
    ||||||||| || |||||||||||||| ||||||||  | ||||| ||| | ||| |||||||||||||||||||    
T  3222897 acaaaaacaaaatgatattcattcatttaaattgatataatacatcaga-ataaatatcgctaaaaacgtaaagg 3222970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Original strand, 4621041 - 4621075
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  4621041 aacgatattcattcattcaaattgatagagtacat 4621075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Complemental strand, 11833478 - 11833444
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  11833478 aacgatattcattcattcaaattgatagagtacat 11833444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Complemental strand, 21603918 - 21603884
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  21603918 aacgatattcattcattcaaattgatagagtacat 21603884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Complemental strand, 21991122 - 21991088
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  21991122 aacgatattcattcattcaaattgatagagtacat 21991088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Original strand, 25854887 - 25854921
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  25854887 aacgatattcattcattcaaattgatagagtacat 25854921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Original strand, 37375717 - 37375751
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  37375717 aacgatattcattcattcaaattgatagagtacat 37375751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Complemental strand, 37593543 - 37593509
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  37593543 aacgatattcattcattcaaattgatggagtacat 37593509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Original strand, 44482539 - 44482573
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  44482539 aacgatattcattcattcaaattgatagagtacat 44482573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Original strand, 48643487 - 48643521
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  48643487 aacgatattcattcattcaaattgatagagtacat 48643521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 394
Target Start/End: Original strand, 3267009 - 3267078
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgt 394  Q
    ||||||||| || ||||||||||||||||||||| | ||||| || |   |||||||||| |||||||||    
T  3267009 acaaaaacaaaatgatattcattcattcaaattgttagagtatatcactcacaaacatcgataaaaacgt 3267078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 378
Target Start/End: Complemental strand, 11344119 - 11344066
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaa 378  Q
    ||||||||| ||||||||||||| ||||||||||||  | ||||| ||||||||    
T  11344119 acaaaaacaaaacgatattcatttattcaaattgatataatacatcagatacaa 11344066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 369
Target Start/End: Complemental strand, 42645114 - 42645081
Alignment:
Q  336 acgatattcattcattcaaattgatcgagtacat 369  Q
    ||||||||||||||||||||||||| ||||||||    
T  42645114 acgatattcattcattcaaattgatagagtacat 42645081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 360
Target Start/End: Original strand, 1769077 - 1769113
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgat 360  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  1769077 gacaaaaacaaaacgacattcattcattcaaattgat 1769113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 357
Target Start/End: Original strand, 4999810 - 4999842
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaatt 357  Q
    ||||||||| |||||||||||||||||||||||    
T  4999810 acaaaaacaaaacgatattcattcattcaaatt 4999842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 371
Target Start/End: Complemental strand, 10094900 - 10094864
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacatta 371  Q
    |||||||||||||||||||||||||| ||||| ||||    
T  10094900 aacgatattcattcattcaaattgatagagtatatta 10094864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 337 - 369
Target Start/End: Original strand, 15674026 - 15674058
Alignment:
Q  337 cgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||| ||||||||    
T  15674026 cgatattcattcattcaaattgattgagtacat 15674058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 356
Target Start/End: Complemental strand, 24770553 - 24770521
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaat 356  Q
    |||||||||| ||||||||||||||||||||||    
T  24770553 gacaaaaacaaaacgatattcattcattcaaat 24770521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 371
Target Start/End: Original strand, 36579002 - 36579038
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacatta 371  Q
    |||||||||||||| ||||||||||| ||||||||||    
T  36579002 aacgatattcattcgttcaaattgatagagtacatta 36579038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 3e-30; HSPs: 61)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 324 - 407
Target Start/End: Complemental strand, 31788764 - 31788681
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||| |||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  31788764 gacaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacatcgctaaaaacgtaaagggtgaatct 31788681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 324 - 407
Target Start/End: Original strand, 5427661 - 5427744
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||| |||||||||||||||||||||| ||| |||||||| |||||||||||||||||||| ||||||||||||||||    
T  5427661 gacaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacatcgctaaaagcgtaaagggtgaatct 5427744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 324 - 407
Target Start/End: Original strand, 36942914 - 36942997
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||| ||||||||||||||||||||||  || |||||||| |||||||||||||||||||||||||||||||||||||    
T  36942914 gacaaaaacaaaacgatattcattcattcaaatcaatagagtacatcagatacaaacatcgctaaaaacgtaaagggtgaatct 36942997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 325 - 405
Target Start/End: Original strand, 31193129 - 31193209
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaat 405  Q
    ||||||||| |||||||||||||||||||||| ||| |||||||| ||||||||||||| |||||||||||||||||||||    
T  31193129 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacatcactaaaaacgtaaagggtgaat 31193209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 324 - 407
Target Start/End: Complemental strand, 4779061 - 4778978
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||| ||| |||||||||||||||||| ||| |||||||| | |||||||||||||||||||||||||||||||||||    
T  4779061 gacaaaaacaaaactatattcattcattcaaatcgatagagtacatcaaatacaaacatcgctaaaaacgtaaagggtgaatct 4778978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 324 - 407
Target Start/End: Complemental strand, 18763776 - 18763693
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||| ||||||||||||||||||||||  || |||||||| ||||||||| |||||||||||||||||||||||||||    
T  18763776 gacaaaaacaaaacgatattcattcattcaaatcaatagagtacatcagatacaaatatcgctaaaaacgtaaagggtgaatct 18763693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 326 - 405
Target Start/End: Complemental strand, 35220634 - 35220555
Alignment:
Q  326 caaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaat 405  Q
    |||||||| ||||| |||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||||||||    
T  35220634 caaaaacaaaacgacattcattcattcaaattgatagagtacatcagatacaaagatcgctaaaaacgtaaagggtgaat 35220555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 324 - 407
Target Start/End: Original strand, 37876398 - 37876481
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||| |||||||||||||||||||||||||| |||||||| | |||||||||||||||||||| |||| |||||||||    
T  37876398 gacaaaaacaaaacgatattcattcattcaaattgatagagtacatcaaatacaaacatcgctaaaaacataaatggtgaatct 37876481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 325 - 407
Target Start/End: Complemental strand, 36692181 - 36692099
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    ||||||||| |||||||| ||||||||||||| ||| |||||||| |||||||||||||||||| ||||||||||||||||||    
T  36692181 acaaaaacaaaacgatatacattcattcaaatcgatagagtacatcagatacaaacatcgctaagaacgtaaagggtgaatct 36692099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 325 - 407
Target Start/End: Complemental strand, 38445473 - 38445391
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    ||||||||| |||||||||||||||||||||| ||| |||||||| |||||||||||| | |||||||||||||| |||||||    
T  38445473 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacattgttaaaaacgtaaaggatgaatct 38445391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 327 - 407
Target Start/End: Original strand, 12677246 - 12677326
Alignment:
Q  327 aaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    ||||||| |||||||||||||||||||||| ||  || ||||| |||||||||||||||||||||| ||||||||||||||    
T  12677246 aaaaacaaaacgatattcattcattcaaatcgacagattacatcagatacaaacatcgctaaaaacataaagggtgaatct 12677326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 327 - 407
Target Start/End: Original strand, 29173512 - 29173592
Alignment:
Q  327 aaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    ||||||| || |||||| |||||||||||||||| || ||||| ||||||||||||||||||||||||||||| |||||||    
T  29173512 aaaaacaaaatgatatttattcattcaaattgattgattacatcagatacaaacatcgctaaaaacgtaaaggatgaatct 29173592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 324 - 407
Target Start/End: Complemental strand, 1415865 - 1415782
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||| || ||||||||||||||||||| ||| || ||||| |||||||||||||||||||||||| || |||||||||    
T  1415865 gacaaaaacaaaatgatattcattcattcaaatcgatagattacatcagatacaaacatcgctaaaaacgttaaaggtgaatct 1415782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 335 - 397
Target Start/End: Original strand, 11985036 - 11985098
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaa 397  Q
    |||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||    
T  11985036 aacgatattcattcattcaaatcgatagagtacatcagatacaaacatcgctaaaaacgtaaa 11985098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 325 - 407
Target Start/End: Original strand, 19062141 - 19062222
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    ||||||| | ||| ||||||||||||| |||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||    
T  19062141 acaaaaataaaacaatattcattcatttaaattgatagagtatattagatacaaacat-gctaaaaacgtaaagggtgaatct 19062222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 324 - 405
Target Start/End: Original strand, 33585527 - 33585608
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaat 405  Q
    |||||||||| |||||||||| |||||||||||  || |||||||| |||||||||||||| |||||||||||||| |||||    
T  33585527 gacaaaaacaaaacgatattctttcattcaaatcaatagagtacatcagatacaaacatcgttaaaaacgtaaaggatgaat 33585608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 324 - 405
Target Start/End: Complemental strand, 33924013 - 33923932
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaat 405  Q
    |||||||||| |||||||||||||||||||||| ||| || ||||| ||||||||| ||||||||||| ||||| |||||||    
T  33924013 gacaaaaacaaaacgatattcattcattcaaatcgatagattacatcagatacaaaaatcgctaaaaaggtaaaaggtgaat 33923932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 324 - 407
Target Start/End: Original strand, 4041386 - 4041469
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||| | || ||||||||||||||||||| ||| | |||||| ||||||||| |||| ||||||||||||||||||||||    
T  4041386 gacaaaaataaaatgatattcattcattcaaatcgatagtgtacatcagatacaaaaatcgttaaaaacgtaaagggtgaatct 4041469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 324 - 407
Target Start/End: Complemental strand, 7646786 - 7646703
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||| |||||||||||||||||||||| |||  ||||||| | ||| ||| ||||||||||||||||| |||||||||    
T  7646786 gacaaaaacaaaacgatattcattcattcaaatcgataaagtacatcaaatataaagatcgctaaaaacgtaaaaggtgaatct 7646703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 325 - 407
Target Start/End: Original strand, 4903938 - 4904020
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    ||||||||| ||||||||||||||||| |||||||| |||||||| | ||| ||| || |||||||||||||||| |||||||    
T  4903938 acaaaaacaaaacgatattcattcatttaaattgatagagtacatcaaatataaatattgctaaaaacgtaaaggctgaatct 4904020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 325 - 407
Target Start/End: Original strand, 25508861 - 25508943
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    ||||||||| ||||||||| |||||||||||||||| |||||||| | |||||||||||| ||||||| |||| | |||||||    
T  25508861 acaaaaacaaaacgatatttattcattcaaattgatagagtacatcatatacaaacatcggtaaaaacataaacgatgaatct 25508943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 327 - 407
Target Start/End: Complemental strand, 4100635 - 4100560
Alignment:
Q  327 aaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    ||||||| |||||||||||||||||||||| ||     || |||| |||||||||||||||||||||||||||||||||||    
T  4100635 aaaaacaaaacgatattcattcattcaaatcga-----tagattacatacaaacatcgctaaaaacgtaaagggtgaatct 4100560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 404
Target Start/End: Original strand, 7677665 - 7677745
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaa 404  Q
    |||||||||| |||||||||||||  || |||||||| ||||| || ||||| ||||||||||||||||||||| ||||||    
T  7677665 gacaaaaacaaaacgatattcatttttttaaattgatagagtatatcagatataaacatcgctaaaaacgtaaaaggtgaa 7677745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 329 - 407
Target Start/End: Complemental strand, 21612541 - 21612464
Alignment:
Q  329 aaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    ||||| ||||||||| |||||||||||||||| || ||||||||| |  |||||||||||||||||||||||| |||||    
T  21612541 aaacaaaacgatatttattcattcaaattgatagaatacattaga-atcaacatcgctaaaaacgtaaagggtaaatct 21612464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 338 - 399
Target Start/End: Complemental strand, 1421969 - 1421908
Alignment:
Q  338 gatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagg 399  Q
    ||||||||||||||||||| |||  ||||||| ||||||||||||| |||||||||||||||    
T  1421969 gatattcattcattcaaatcgataaagtacatcagatacaaacatcactaaaaacgtaaagg 1421908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 338 - 407
Target Start/End: Original strand, 30399835 - 30399904
Alignment:
Q  338 gatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||| ||||||||||||||||||||| ||||| ||| ||||| ||||| ||||||| |||||||    
T  30399835 gatattcatttattcaaattgatcgagtacatcagatataaatatcgcaaaaaatgtaaaggatgaatct 30399904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 338 - 397
Target Start/End: Complemental strand, 8809575 - 8809514
Alignment:
Q  338 gatattcattcattcaaattgatcgagtac--attagatacaaacatcgctaaaaacgtaaa 397  Q
    ||||||||||||||||||||||| ||||||  || ||||||||||||| |||||||||||||    
T  8809575 gatattcattcattcaaattgatagagtacatataagatacaaacatcactaaaaacgtaaa 8809514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 335 - 401
Target Start/End: Original strand, 9169060 - 9169126
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggt 401  Q
    |||||||||| ||||||||||| ||| |||| ||| ||||| ||||||| |||||||||||||||||    
T  9169060 aacgatattcgttcattcaaatcgattgagtgcatcagataaaaacatcactaaaaacgtaaagggt 9169126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 324 - 407
Target Start/End: Complemental strand, 37994591 - 37994509
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||| |||||||||||||||||||||||||| || ||||| ||| |  |||||| |||||| |||||| | |||||||    
T  37994591 gacaaaaacaaaacgatattcattcattcaaattgatagaatacatcaga-atcaacatccctaaaatcgtaaaagatgaatct 37994509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 324 - 405
Target Start/End: Original strand, 29279357 - 29279443
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagt-----acattagatacaaacatcgctaaaaacgtaaagggtgaat 405  Q
    |||||||||  ||||||||||||||||||||||||||  |||     |||| | ||||| ||||||||||||||||||| |||||||    
T  29279357 gacaaaaactaaacgatattcattcattcaaattgataaagtatatcacatcaaatacagacatcgctaaaaacgtaaatggtgaat 29279443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 324 - 366
Target Start/End: Complemental strand, 41328047 - 41328005
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagta 366  Q
    |||||||||| |||||||||||||||||||||||||| |||||    
T  41328047 gacaaaaacaaaacgatattcattcattcaaattgatagagta 41328005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 325 - 369
Target Start/End: Original strand, 30923250 - 30923294
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacat 369  Q
    ||||||||| || ||||||||||||||||||||||| ||||||||    
T  30923250 acaaaaacaaaatgatattcattcattcaaattgatagagtacat 30923294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 335 - 378
Target Start/End: Original strand, 6358673 - 6358716
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacattagatacaa 378  Q
    |||||||||||||||||||||||||| || ||||| ||||||||    
T  6358673 aacgatattcattcattcaaattgatggaatacatcagatacaa 6358716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 335 - 370
Target Start/End: Original strand, 7071436 - 7071471
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacatt 370  Q
    |||||||||||||||||||||||||| |||||||||    
T  7071436 aacgatattcattcattcaaattgatagagtacatt 7071471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 335 - 378
Target Start/End: Complemental strand, 27096149 - 27096107
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacattagatacaa 378  Q
    |||||||||||||||||||||||||| ||||||| |||||||||    
T  27096149 aacgatattcattcattcaaattgatggagtaca-tagatacaa 27096107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 324 - 407
Target Start/End: Original strand, 27097208 - 27097282
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||| ||||||||||||||||||||         |||||| | ||||||| ||| |||||||||||||||||||||||    
T  27097208 gacaaaaacaaaacgatattcattcattcaa---------gtacatcaaatacaaatatctctaaaaacgtaaagggtgaatct 27097282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Complemental strand, 3527446 - 3527412
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  3527446 aacgatattcattcattcaaattgatagagtacat 3527412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Complemental strand, 4739789 - 4739755
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  4739789 aacgatattcattcattcaaattgatagagtacat 4739755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 378
Target Start/End: Original strand, 12553961 - 12554015
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaa 378  Q
    |||||||| | || ||||||||||||||||||||||| ||||| || ||||||||    
T  12553961 gacaaaaataaaatgatattcattcattcaaattgatagagtatatcagatacaa 12554015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Original strand, 13878670 - 13878704
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  13878670 aacgatattcattcattcaaattgatagagtacat 13878704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Original strand, 14018795 - 14018829
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  14018795 aacgatattcattcattcaaattgatagagtacat 14018829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Complemental strand, 16136538 - 16136504
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  16136538 aacgatattcattcattcaaattgatagagtacat 16136504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Original strand, 20560794 - 20560828
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  20560794 aacgatattcattcattcaaattgatagagtacat 20560828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 404
Target Start/End: Complemental strand, 24461746 - 24461671
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaa 404  Q
    ||||||| | |||||||||||||||||||||||||| || |||||     |  |||||||||||||||||||||| ||||    
T  24461746 acaaaaataaaacgatattcattcattcaaattgatagaatacat----aatcaacatcgctaaaaacgtaaaggatgaa 24461671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Complemental strand, 25068301 - 25068267
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  25068301 aacgatattcattcattcaaattgatagagtacat 25068267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Complemental strand, 29543253 - 29543219
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  29543253 aacgatattcattcattcaaattgatagagtacat 29543219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Original strand, 31908478 - 31908512
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  31908478 aacgatattcattcattcaaattgatagagtacat 31908512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Complemental strand, 32015713 - 32015679
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  32015713 aacgatattcattcattcaaattgatagagtacat 32015679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Complemental strand, 33012508 - 33012474
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  33012508 aacgatattcattcattcaaattgatagagtacat 33012474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Complemental strand, 35333965 - 35333931
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  35333965 aacgatattcattcattcaaattgatagagtacat 35333931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Complemental strand, 43696328 - 43696294
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  43696328 aacgatattcattcattcaaattgatagagtacat 43696294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Complemental strand, 44942746 - 44942712
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  44942746 aacgatattcattcattcaaattgatagagtacat 44942712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 9374337 - 9374382
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||| |||||||||||||||||||||| ||  ||||||||    
T  9374337 gacaaaaacaaaacgatattcattcattcaaatcgacagagtacat 9374382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 378
Target Start/End: Complemental strand, 14416473 - 14416420
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaa 378  Q
    ||||||||| || |||||| |||||||||||||||| || ||||| ||||||||    
T  14416473 acaaaaacaaaatgatatttattcattcaaattgatagaatacatcagatacaa 14416420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 26491750 - 26491706
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||| |||||||||||||||||||||||||| || |||||    
T  26491750 gacaaaaaca-aacgatattcattcattcaaattgatagaatacat 26491706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 378
Target Start/End: Complemental strand, 27865227 - 27865174
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaa 378  Q
    ||||||||| ||||||||| ||| ||| |||||||  |||||||||||||||||    
T  27865227 acaaaaacaaaacgatatttatttatttaaattgaaagagtacattagatacaa 27865174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 32448409 - 32448454
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||| || ||||||||||||||||||||||| || |||||    
T  32448409 gacaaaaacaaaatgatattcattcattcaaattgatagaatacat 32448454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 329 - 374
Target Start/End: Complemental strand, 37417023 - 37416978
Alignment:
Q  329 aaacagaacgatattcattcattcaaattgatcgagtacattagat 374  Q
    ||||| ||| |||||||||||||||||||||| || ||||||||||    
T  37417023 aaacaaaacaatattcattcattcaaattgatggaatacattagat 37416978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Complemental strand, 13269008 - 13268976
Alignment:
Q  338 gatattcattcattcaaattgatcgagtacatt 370  Q
    ||||||||||||||||||||||| |||||||||    
T  13269008 gatattcattcattcaaattgatagagtacatt 13268976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 378
Target Start/End: Original strand, 28871582 - 28871623
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacattagatacaa 378  Q
    |||||||||||||||||||||||||  |||||||| ||||||||    
T  28871582 aacgatattcattcattcaaattga--gagtacatcagatacaa 28871623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 378
Target Start/End: Complemental strand, 40125821 - 40125782
Alignment:
Q  338 gatattcattcattcaaattgatcgagtacattagatacaa 378  Q
    ||||||||||||||||||||||| ||||||| |||||||||    
T  40125821 gatattcattcattcaaattgatagagtaca-tagatacaa 40125782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 67; Significance: 1e-29; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 325 - 407
Target Start/End: Original strand, 16928547 - 16928629
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    ||||| |||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  16928547 acaaagacagaacgatattcattcattcaaatcgatagagtacatcagatacaaacatcgctaaaaacgtaaagggtgaatct 16928629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 324 - 407
Target Start/End: Original strand, 7883030 - 7883113
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||| ||||||||||||||||||||||  || |||||||| |||||||||||||||||||||||||||||||||||||    
T  7883030 gacaaaaacaaaacgatattcattcattcaaatcaatagagtacatcagatacaaacatcgctaaaaacgtaaagggtgaatct 7883113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 327 - 407
Target Start/End: Original strand, 33214463 - 33214543
Alignment:
Q  327 aaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    ||||||| |||||||||||||||||||||| ||| |||||||||||||| |||| ||||||||||||||||||||||||||    
T  33214463 aaaaacaaaacgatattcattcattcaaatcgatagagtacattagatataaacgtcgctaaaaacgtaaagggtgaatct 33214543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 324 - 407
Target Start/End: Original strand, 30568110 - 30568193
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||| || ||||||||||||||||||||||| || ||||| | |||||||||||||||||||||||||||||||||||    
T  30568110 gacaaaaacaaaatgatattcattcattcaaattgatagattacatcatatacaaacatcgctaaaaacgtaaagggtgaatct 30568193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 324 - 397
Target Start/End: Original strand, 40618862 - 40618935
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaa 397  Q
    |||||||||| |||||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||    
T  40618862 gacaaaaacaaaacgatattcattcattcaaattgatagaatacatcagatacaaacatcgctaaaaacgtaaa 40618935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 325 - 404
Target Start/End: Original strand, 9637199 - 9637278
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaa 404  Q
    ||||||||| ||||||||||||||||| |||||||| |||||||| ||||||||||||| ||||||||||||| ||||||    
T  9637199 acaaaaacaaaacgatattcattcatttaaattgatagagtacatcagatacaaacatcactaaaaacgtaaatggtgaa 9637278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 324 - 407
Target Start/End: Original strand, 17693402 - 17693485
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||| ||||||||||||||| |||||||||| |||||||| | ||||||||||||||||||| |||||| ||||||||    
T  17693402 gacaaaaacaaaacgatattcattcactcaaattgatagagtacatcaaatacaaacatcgctaaaaatgtaaagagtgaatct 17693485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 335 - 405
Target Start/End: Complemental strand, 41684662 - 41684592
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaat 405  Q
    ||||||||||||||||| |||||||| |||||||| ||||| |||||||||||||||||||||||||||||    
T  41684662 aacgatattcattcatttaaattgatagagtacatcagatataaacatcgctaaaaacgtaaagggtgaat 41684592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 324 - 404
Target Start/End: Complemental strand, 3673741 - 3673661
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaa 404  Q
    |||||||||| ||||||||||||||||||||||||||  | |||| |||||| ||||| ||||||||||||||||||||||    
T  3673741 gacaaaaacaaaacgatattcattcattcaaattgatataatacactagatataaacaacgctaaaaacgtaaagggtgaa 3673661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 326 - 407
Target Start/End: Original strand, 40211091 - 40211174
Alignment:
Q  326 caaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaa--cgtaaagggtgaatct 407  Q
    |||||||| |||||||||||||||||||||| ||| |||||||| ||||| |||||||||||||||  ||||||||||||||||    
T  40211091 caaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatataaacatcgctaaaaacgcgtaaagggtgaatct 40211174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 324 - 407
Target Start/End: Complemental strand, 23230943 - 23230860
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    ||||||| || |||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||  ||||| |||||||||    
T  23230943 gacaaaagcaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacatcgctaaaagtgtaaatggtgaatct 23230860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 324 - 395
Target Start/End: Original strand, 28086601 - 28086672
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgta 395  Q
    |||||||||| ||||||||||||| ||||||||||||  ||||||| |||||||||||||||||||||||||    
T  28086601 gacaaaaacaaaacgatattcatttattcaaattgatatagtacatcagatacaaacatcgctaaaaacgta 28086672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 324 - 407
Target Start/End: Original strand, 31013397 - 31013480
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||| ||||||| ||||||||||| || |||  ||||||| |||||||||||| ||||||||||||||||||||||||    
T  31013397 gacaaaaacaaaacgatagtcattcattcatatcgataaagtacatcagatacaaacattgctaaaaacgtaaagggtgaatct 31013480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 326 - 405
Target Start/End: Original strand, 45445602 - 45445681
Alignment:
Q  326 caaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaat 405  Q
    |||||||| |||||||||||||||||||||| ||| || ||||| |||||||||||||| |||||||||||| |||||||    
T  45445602 caaaaacaaaacgatattcattcattcaaatcgatggattacatcagatacaaacatcgttaaaaacgtaaaaggtgaat 45445681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 339 - 407
Target Start/End: Original strand, 27498170 - 27498238
Alignment:
Q  339 atattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||||||||||||||| |||||||| |||||||||||||  ||||| ||||||||||||||||    
T  27498170 atattcattcattcaaattgatagagtacatcagatacaaacatcattaaaatcgtaaagggtgaatct 27498238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 324 - 407
Target Start/End: Original strand, 8412311 - 8412394
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||| | ||||||||||||||||||||||  || || || || |||||||||||||||||||||| ||||||||||||||    
T  8412311 gacaaaaataaaacgatattcattcattcaaatcaatagattaaatcagatacaaacatcgctaaaaacataaagggtgaatct 8412394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 324 - 407
Target Start/End: Original strand, 24099046 - 24099128
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||| |||||||||||||||||||||||||  || ||||| ||| |  ||||||||||||||||||||||||||||||    
T  24099046 gacaaaaacaaaacgatattcattcattcaaattgacagaatacatcaga-atcaacatcgctaaaaacgtaaagggtgaatct 24099128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 335 - 407
Target Start/End: Original strand, 25190865 - 25190937
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||||||||||||||| ||| || ||||| |||||||||||| ||||||| |||||| |||||||||    
T  25190865 aacgatattcattcattcaaatcgatagattacatcagatacaaacattgctaaaatcgtaaaaggtgaatct 25190937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 324 - 407
Target Start/End: Complemental strand, 21238087 - 21238005
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||| ||| |||||||||||||||||||||| || ||||| | | |  ||||||||||||||||||||||||||||||    
T  21238087 gacaaaaacaaaacaatattcattcattcaaattgatagaatacatcata-atcaacatcgctaaaaacgtaaagggtgaatct 21238005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 324 - 407
Target Start/End: Complemental strand, 3240681 - 3240597
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgct--aaaaacgtaaagggtgaatct 407  Q
    |||||||||| |||||| ||||||||||||||||||| || ||||||||| |  |||||||||  ||||||||||||| |||||||    
T  3240681 gacaaaaacaaaacgatgttcattcattcaaattgatagaatacattaga-atcaacatcgctaaaaaaacgtaaaggatgaatct 3240597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 324 - 407
Target Start/End: Complemental strand, 37971587 - 37971500
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgc----taaaaacgtaaagggtgaatct 407  Q
    |||||||| | ||||||||||||||| ||||||  || |||||||| |||||||||||||||    |||||| |||||||||||||||    
T  37971587 gacaaaaataaaacgatattcattcactcaaatcaatagagtacatcagatacaaacatcgctaattaaaaatgtaaagggtgaatct 37971500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 325 - 407
Target Start/End: Original strand, 7677071 - 7677155
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacat--tagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    ||||||| | ||| ||||||||||||| |||| |||  |||||||  || |||||||||||||||||||||||||| ||||||||    
T  7677071 acaaaaataaaaccatattcattcatttaaatcgatatagtacatcatatatacaaacatcgctaaaaacgtaaagagtgaatct 7677155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 325 - 405
Target Start/End: Original strand, 16247014 - 16247095
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgct-aaaaacgtaaagggtgaat 405  Q
    ||||||| | || |||||||||| |||||||||||| || ||||| |||||||||||||  | |||||||||||||||||||    
T  16247014 acaaaaataaaatgatattcatttattcaaattgatggaatacatcagatacaaacatcaataaaaaacgtaaagggtgaat 16247095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 325 - 375
Target Start/End: Original strand, 19443843 - 19443893
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacattagata 375  Q
    ||||||| | |||||||||||||||||||||||||| |||||||| |||||    
T  19443843 acaaaaataaaacgatattcattcattcaaattgatagagtacatcagata 19443893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 342 - 407
Target Start/End: Original strand, 7198003 - 7198067
Alignment:
Q  342 ttcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    ||||||||||||||||||| || ||||| |||  |||  |||||||||||||||||||||||||||    
T  7198003 ttcattcattcaaattgatagaatacatcagaatcaag-atcgctaaaaacgtaaagggtgaatct 7198067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 342 - 407
Target Start/End: Original strand, 24186468 - 24186533
Alignment:
Q  342 ttcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||| |||||||| ||| |||||||| | |||||||||||| |||||||||||| | |||||||    
T  24186468 ttcatttattcaaatagatagagtacatcatatacaaacatcgataaaaacgtaaaagatgaatct 24186533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 407
Target Start/End: Complemental strand, 15344609 - 15344525
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaac-atcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||| | || |||||| |||||||||||||||| || ||||| |||  ||||  ||||||||||||||||||| |||||||    
T  15344609 gacaaaaataaaatgatatttattcattcaaattgatagaatacatcagaatcaaaagatcgctaaaaacgtaaaggatgaatct 15344525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 407
Target Start/End: Complemental strand, 15433674 - 15433590
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaac-atcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||| | || |||||| |||||||||||||||| || ||||| |||  ||||  ||||||||||||||||||| |||||||    
T  15433674 gacaaaaataaaatgatatttattcattcaaattgatagaatacatcagaatcaaaagatcgctaaaaacgtaaaggatgaatct 15433590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 407
Target Start/End: Complemental strand, 15524978 - 15524894
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaac-atcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||| | || |||||| |||||||||||||||| || ||||| |||  ||||  ||||||||||||||||||| |||||||    
T  15524978 gacaaaaataaaatgatatttattcattcaaattgatagaatacatcagaatcaaaagatcgctaaaaacgtaaaggatgaatct 15524894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 324 - 407
Target Start/End: Original strand, 1236487 - 1236569
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||| || ||||||||||||||||||| ||| || ||||| ||| |  || || |||||||||||||||| |||||||    
T  1236487 gacaaaaacaaaatgatattcattcattcaaatcgatagaatacatcaga-atcaagattgctaaaaacgtaaaggatgaatct 1236569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 335 - 370
Target Start/End: Complemental strand, 4757608 - 4757573
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacatt 370  Q
    |||||||||||||||||||||||||| |||||||||    
T  4757608 aacgatattcattcattcaaattgatagagtacatt 4757573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 339 - 370
Target Start/End: Original strand, 12111013 - 12111044
Alignment:
Q  339 atattcattcattcaaattgatcgagtacatt 370  Q
    ||||||||||||||||||||||||||||||||    
T  12111013 atattcattcattcaaattgatcgagtacatt 12111044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 335 - 378
Target Start/End: Original strand, 20227077 - 20227120
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacattagatacaa 378  Q
    |||||||||||||| ||||||||||| |||| ||||||||||||    
T  20227077 aacgatattcattcgttcaaattgatagagtgcattagatacaa 20227120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 378
Target Start/End: Original strand, 470936 - 470990
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaa 378  Q
    |||||||||| ||| ||||||||||||| |||||||| || ||||| ||||||||    
T  470936 gacaaaaacaaaacaatattcattcatttaaattgatagaatacatcagatacaa 470990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Original strand, 1809907 - 1809941
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  1809907 aacgatattcattcattcaaattgatagagtacat 1809941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Original strand, 2234139 - 2234173
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  2234139 aacgatattcattcattcaaattgatagagtacat 2234173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Complemental strand, 2968975 - 2968941
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  2968975 aacgatattcattcattcaaattgatagagtacat 2968941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Complemental strand, 9502028 - 9501994
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  9502028 aacgatattcattcattcaaattgatagagtacat 9501994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 366
Target Start/End: Complemental strand, 10377974 - 10377932
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagta 366  Q
    |||||||||| |||||||||||||||||||||| ||| |||||    
T  10377974 gacaaaaacaaaacgatattcattcattcaaatcgatagagta 10377932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 366
Target Start/End: Original strand, 15596946 - 15596984
Alignment:
Q  328 aaaacagaacgatattcattcattcaaattgatcgagta 366  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  15596946 aaaacaaaacgatattcattcattcaaattgatagagta 15596984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Original strand, 24790839 - 24790873
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  24790839 aacgatattcattcattcaaattgatagagtacat 24790873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Complemental strand, 31202908 - 31202874
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  31202908 aacgatattcattcattcaaattgatagagtacat 31202874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Complemental strand, 41362193 - 41362159
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  41362193 aacgatattcattcattcaaattgatagagtacat 41362159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 378
Target Start/End: Complemental strand, 8868118 - 8868065
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaa 378  Q
    |||||| || ||||| |||||||||||||||||||| || ||||| ||||||||    
T  8868118 acaaaagcaaaacgacattcattcattcaaattgatagaatacatcagatacaa 8868065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 369
Target Start/End: Complemental strand, 11162345 - 11162312
Alignment:
Q  336 acgatattcattcattcaaattgatcgagtacat 369  Q
    ||||||||||||||||||||||||| ||||||||    
T  11162345 acgatattcattcattcaaattgatggagtacat 11162312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 378
Target Start/End: Complemental strand, 34102566 - 34102513
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaa 378  Q
    ||||||||| ||| |||||||||||||||| ||||| |||| ||||| ||||||    
T  34102566 acaaaaacaaaacaatattcattcattcaagttgatagagttcattaaatacaa 34102513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 378
Target Start/End: Complemental strand, 34610146 - 34610093
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaa 378  Q
    ||||||||| ||||||||| ||||||||||||||||  | ||||| ||||||||    
T  34610146 acaaaaacaaaacgatatttattcattcaaattgatataatacatcagatacaa 34610093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Complemental strand, 6833774 - 6833742
Alignment:
Q  338 gatattcattcattcaaattgatcgagtacatt 370  Q
    ||||||||||||||||||||||| |||||||||    
T  6833774 gatattcattcattcaaattgatagagtacatt 6833742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 356
Target Start/End: Original strand, 27746889 - 27746921
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaat 356  Q
    |||||||||| ||||||||||||||||||||||    
T  27746889 gacaaaaacaaaacgatattcattcattcaaat 27746921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Complemental strand, 32413226 - 32413194
Alignment:
Q  338 gatattcattcattcaaattgatcgagtacatt 370  Q
    ||||||||||||||||||||||| |||||||||    
T  32413226 gatattcattcattcaaattgatagagtacatt 32413194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 1e-29; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 325 - 407
Target Start/End: Original strand, 56040438 - 56040520
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    ||||||||| |||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  56040438 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacatcgctaaaaacgtaaagggtgaatct 56040520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 324 - 407
Target Start/End: Original strand, 19853303 - 19853386
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||| |||||||||||||||||||||| ||| |||||||| |||||||||||||| ||||||||||||||||||||||    
T  19853303 gacaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacatcgttaaaaacgtaaagggtgaatct 19853386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 325 - 407
Target Start/End: Complemental strand, 2521096 - 2521014
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    ||||||||| |||||||||||||||||||||| ||| |||| ||| |||||||||||||||||||||||||||||||||||||    
T  2521096 acaaaaacaaaacgatattcattcattcaaatcgatagagtccatcagatacaaacatcgctaaaaacgtaaagggtgaatct 2521014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 325 - 407
Target Start/End: Original strand, 26633463 - 26633545
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    ||||||||| |||||||||||||||||||||| ||| |||||||| ||||||||||||| |||||||||||||||||||||||    
T  26633463 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacatcactaaaaacgtaaagggtgaatct 26633545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 324 - 405
Target Start/End: Original strand, 21686033 - 21686114
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaat 405  Q
    |||||||||| |||||||||||||||||||||| ||| |||||||| ||||||||||||||||| |||||||||||||||||    
T  21686033 gacaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacatcgctacaaacgtaaagggtgaat 21686114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 324 - 407
Target Start/End: Complemental strand, 13634433 - 13634350
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||| || ||||||||||||||||||| ||| |||||||| |||||||||||||||||||| ||||||||||||||||    
T  13634433 gacaaaaacaaaatgatattcattcattcaaatcgatagagtacatcagatacaaacatcgctaaaagcgtaaagggtgaatct 13634350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 324 - 407
Target Start/End: Complemental strand, 32766832 - 32766749
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||| ||| |||||||||||||||||| ||| |||||||| ||||||||||||||||||||||| |||||||||||||    
T  32766832 gacaaaaacaaaacaatattcattcattcaaatcgatagagtacatcagatacaaacatcgctaaaaacgcaaagggtgaatct 32766749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 335 - 407
Target Start/End: Original strand, 48257434 - 48257506
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||||||||||||||| ||| |||||||| |||||||||||||| ||||||||||||||||||||||    
T  48257434 aacgatattcattcattcaaatcgatagagtacatcagatacaaacatcgttaaaaacgtaaagggtgaatct 48257506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 324 - 407
Target Start/End: Original strand, 4142555 - 4142638
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||| |||||||||||||||||||||| ||| |||||||| | |||||||||| |||||||| |||||||||||||||    
T  4142555 gacaaaaacaaaacgatattcattcattcaaatcgatagagtacatcaaatacaaacattgctaaaaatgtaaagggtgaatct 4142638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 327 - 407
Target Start/End: Complemental strand, 43510511 - 43510431
Alignment:
Q  327 aaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    ||||||| |||||||||||||||||||||| |||  ||||||| | ||||||| |||||||||||||||||||||||||||    
T  43510511 aaaaacaaaacgatattcattcattcaaatcgataaagtacatcaaatacaaatatcgctaaaaacgtaaagggtgaatct 43510431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 324 - 407
Target Start/End: Original strand, 17949114 - 17949198
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgct-aaaaacgtaaagggtgaatct 407  Q
    |||| ||||| |||||||||||||||||||||| ||| ||||| || |||||||||||||||| ||||| |||||||||||||||    
T  17949114 gacagaaacaaaacgatattcattcattcaaatcgatagagtatatcagatacaaacatcgctaaaaaatgtaaagggtgaatct 17949198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 324 - 407
Target Start/End: Original strand, 17952966 - 17953050
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgct-aaaaacgtaaagggtgaatct 407  Q
    |||| ||||| |||||||||||||||||||||| ||| ||||| || |||||||||||||||| ||||| |||||||||||||||    
T  17952966 gacagaaacaaaacgatattcattcattcaaatcgatagagtatatcagatacaaacatcgctaaaaaatgtaaagggtgaatct 17953050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 335 - 407
Target Start/End: Original strand, 24098871 - 24098943
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||||||||||||||| ||| |||||||| |||||||||||| ||||||||||||||| ||| ||||    
T  24098871 aacgatattcattcattcaaatcgatagagtacatcagatacaaacattgctaaaaacgtaaagagtggatct 24098943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 324 - 407
Target Start/End: Complemental strand, 53444437 - 53444353
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatac-aaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||| ||  |||||||||||||||||| ||| || |||||||||||| ||||||||||||||||||||| |||||||||    
T  53444437 gacaaaaacaaaataatattcattcattcaaatagatagattacattagatacaaaacatcgctaaaaacgtaaaaggtgaatct 53444353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 324 - 399
Target Start/End: Original strand, 10258692 - 10258767
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagg 399  Q
    |||||||||| |  || |||||||||||||||||||| |||||||| |||||||||||| ||||||||||||||||    
T  10258692 gacaaaaacaaagtgagattcattcattcaaattgatagagtacatcagatacaaacattgctaaaaacgtaaagg 10258767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 325 - 407
Target Start/End: Complemental strand, 52979061 - 52978979
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    ||||||||| |||||||||| |||||||||||||||| ||||||| ||||| |||||| | |||||||  |||||||||||||    
T  52979061 acaaaaacaaaacgatattctttcattcaaattgatctagtacatcagatataaacattgttaaaaacaaaaagggtgaatct 52978979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 325 - 407
Target Start/End: Complemental strand, 35348626 - 35348542
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatc--gagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||| |||| |||||||||||||||  ||||| |||   |||||||| |||||||||||||||||||||||||||||||||||||    
T  35348626 acaataacaaaacgatattcattcaaccaaatcgataaagagtacatcagatacaaacatcgctaaaaacgtaaagggtgaatct 35348542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 325 - 404
Target Start/End: Complemental strand, 21662754 - 21662675
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaa 404  Q
    |||||| || ||||||||| ||||||||||| |||| |||||||| | |||||||||||||||||||| |||| ||||||    
T  21662754 acaaaatcaaaacgatatttattcattcaaagtgatagagtacatcaaatacaaacatcgctaaaaacataaatggtgaa 21662675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 325 - 404
Target Start/End: Complemental strand, 21671518 - 21671439
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaa 404  Q
    |||||| || ||||||||| ||||||||||| |||| |||||||| | |||||||||||||||||||| |||| ||||||    
T  21671518 acaaaatcaaaacgatatttattcattcaaagtgatagagtacatcaaatacaaacatcgctaaaaacataaatggtgaa 21671439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 341 - 407
Target Start/End: Original strand, 29960757 - 29960823
Alignment:
Q  341 attcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||||||||| ||| ||||| |||||||||||| |||||||||||| |||| |||||||||    
T  29960757 attcattcattcaaatcgatggagtatattagatacaaatatcgctaaaaacataaaaggtgaatct 29960823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 335 - 407
Target Start/End: Complemental strand, 10496643 - 10496570
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacg-taaagggtgaatct 407  Q
    |||||||||||||||||||||||||| ||||| || | ||||||| ||||||||||||| |||||| |||||||    
T  10496643 aacgatattcattcattcaaattgatagagtatatcaaatacaaatatcgctaaaaacgttaaaggatgaatct 10496570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 325 - 407
Target Start/End: Complemental strand, 22611507 - 22611418
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacat-------cgctaaaaacgtaaagggtgaatct 407  Q
    ||||||||| ||||||||| ||||||| |||| ||| |||||||| ||||||||||||       |||||||||||||||||||||||||    
T  22611507 acaaaaacaaaacgatatttattcatttaaatcgatagagtacatcagatacaaacatcattaaacgctaaaaacgtaaagggtgaatct 22611418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 324 - 407
Target Start/End: Original strand, 36204171 - 36204253
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||| |||||||||| ||||||||||||||  || ||||| ||| |  ||||||||||||||| ||||||||||||||    
T  36204171 gacaaaaacaaaacgatattctttcattcaaattgacagaatacatcaga-atcaacatcgctaaaaacataaagggtgaatct 36204253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 324 - 378
Target Start/End: Original strand, 6155000 - 6155054
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaa 378  Q
    |||||||||| || ||||||||||||||||||||||| || ||||||||||||||    
T  6155000 gacaaaaacaaaatgatattcattcattcaaattgatagaatacattagatacaa 6155054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 327 - 407
Target Start/End: Complemental strand, 28857715 - 28857636
Alignment:
Q  327 aaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    ||||||| ||||||||||||||||||||||||||  | |||||  || |  |||||||||||||||||||||| |||||||    
T  28857715 aaaaacaaaacgatattcattcattcaaattgatataatacatcgga-atcaacatcgctaaaaacgtaaaggatgaatct 28857636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 324 - 383
Target Start/End: Complemental strand, 44596977 - 44596918
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatc 383  Q
    |||||||||| ||| ||||||||| |||||||||||| |||||||| | |||||||||||    
T  44596977 gacaaaaacaaaacaatattcattaattcaaattgatagagtacatcaaatacaaacatc 44596918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 324 - 407
Target Start/End: Complemental strand, 53811336 - 53811262
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||| ||||||||||||||||| |||| ||| ||||||||         |||||||||||||||||||||||||||||    
T  53811336 gacaaaaacaaaacgatattcattcatttaaatcgatagagtacat---------acatcgctaaaaacgtaaagggtgaatct 53811262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 335 - 407
Target Start/End: Complemental strand, 43095940 - 43095863
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagt-----acattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||||||||||||||||||| ||||     |||| ||||| ||||||| ||||||||||||| | |||||||    
T  43095940 aacgatattcattcattcaaattgatagagtatatcacatcagatataaacatccctaaaaacgtaaatgatgaatct 43095863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 360
Target Start/End: Complemental strand, 9048992 - 9048956
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgat 360  Q
    |||||||||| ||||||||||||||||||||||||||    
T  9048992 gacaaaaacaaaacgatattcattcattcaaattgat 9048956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 355 - 407
Target Start/End: Original strand, 26090732 - 26090784
Alignment:
Q  355 attgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||| ||||| || ||||||||||| ||||||||||||||||| |||||||    
T  26090732 attgatagagtatatcagatacaaacaacgctaaaaacgtaaaggatgaatct 26090784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 326 - 378
Target Start/End: Complemental strand, 43853770 - 43853718
Alignment:
Q  326 caaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaa 378  Q
    |||||| | |||||||||||||||||||||||||| || ||||| ||||||||    
T  43853770 caaaaataaaacgatattcattcattcaaattgatagaatacatcagatacaa 43853718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 335 - 370
Target Start/End: Complemental strand, 7060774 - 7060739
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacatt 370  Q
    |||||||||||||||||||||||||| |||||||||    
T  7060774 aacgatattcattcattcaaattgatagagtacatt 7060739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 335 - 370
Target Start/End: Original strand, 8517120 - 8517155
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacatt 370  Q
    |||||||||||||||||||||||||| |||||||||    
T  8517120 aacgatattcattcattcaaattgatagagtacatt 8517155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 335 - 370
Target Start/End: Original strand, 29266565 - 29266600
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacatt 370  Q
    |||||||||||||||||||||||||| |||||||||    
T  29266565 aacgatattcattcattcaaattgatagagtacatt 29266600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 325 - 360
Target Start/End: Original strand, 56156440 - 56156475
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgat 360  Q
    ||||||||| ||||||||||||||||||||||||||    
T  56156440 acaaaaacaaaacgatattcattcattcaaattgat 56156475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Complemental strand, 6882404 - 6882370
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  6882404 aacgatattcattcattcaaattgatagagtacat 6882370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Complemental strand, 7084402 - 7084368
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  7084402 aacgatattcattcattcaaattgatagagtacat 7084368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Complemental strand, 13966003 - 13965969
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  13966003 aacgatattcattcattcaaattgatagagtacat 13965969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Complemental strand, 14346870 - 14346836
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  14346870 aacgatattcattcattcaaattgatagagtacat 14346836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Complemental strand, 24826099 - 24826065
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  24826099 aacgatattcattcattcaaattgatagagtacat 24826065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Complemental strand, 31522406 - 31522372
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  31522406 aacgatattcattcattcaaattgatagagtacat 31522372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Complemental strand, 38435037 - 38435003
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  38435037 aacgatattcattcattcaaattgatagagtacat 38435003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Complemental strand, 42198013 - 42197979
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  42198013 aacgatattcattcattcaaattgatagagtacat 42197979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Original strand, 45350731 - 45350765
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  45350731 aacgatattcattcattcaaattgatagagtacat 45350765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Original strand, 45360210 - 45360244
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  45360210 aacgatattcattcattcaaattgatagagtacat 45360244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 378
Target Start/End: Complemental strand, 37465801 - 37465748
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaa 378  Q
    ||||| ||| ||||||||||||||||| |||||||| || ||||| ||||||||    
T  37465801 acaaagacaaaacgatattcattcatttaaattgatagaatacatcagatacaa 37465748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 368
Target Start/End: Original strand, 43244042 - 43244075
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtaca 368  Q
    |||||||||||||||||||||||||| |||||||    
T  43244042 aacgatattcattcattcaaattgatagagtaca 43244075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 371
Target Start/End: Original strand, 7273607 - 7273643
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacatta 371  Q
    |||||||||||||||||||||||||| ||||| ||||    
T  7273607 aacgatattcattcattcaaattgatagagtatatta 7273643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 24611462 - 24611494
Alignment:
Q  338 gatattcattcattcaaattgatcgagtacatt 370  Q
    ||||||||||||||||||||||| |||||||||    
T  24611462 gatattcattcattcaaattgatagagtacatt 24611494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 356
Target Start/End: Original strand, 52097690 - 52097722
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaat 356  Q
    |||||||||| ||||||||||||||||||||||    
T  52097690 gacaaaaacaaaacgatattcattcattcaaat 52097722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 5e-29; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 324 - 405
Target Start/End: Original strand, 32327011 - 32327092
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaat 405  Q
    |||||||||| |||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||    
T  32327011 gacaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacatcgctaaaaacgtaaagggtgaat 32327092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 324 - 405
Target Start/End: Original strand, 33052959 - 33053040
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaat 405  Q
    |||||||||| |||||||||||||||||||||||||| |||||||| | |||||||||| ||||||||||||||||||||||    
T  33052959 gacaaaaacaaaacgatattcattcattcaaattgatagagtacatcaaatacaaacattgctaaaaacgtaaagggtgaat 33053040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 325 - 405
Target Start/End: Complemental strand, 12170766 - 12170686
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaat 405  Q
    ||||||||| |||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||| |||||||||||||    
T  12170766 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacatcgctaaaaatgtaaagggtgaat 12170686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 324 - 407
Target Start/End: Complemental strand, 606503 - 606420
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||| || ||||||||||||||||||| ||| |||||||| |||||||||||||| ||||||||||||||||||||||    
T  606503 gacaaaaacaaaatgatattcattcattcaaatcgatagagtacatcagatacaaacatcgttaaaaacgtaaagggtgaatct 606420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 324 - 407
Target Start/End: Original strand, 3913365 - 3913448
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||| | |||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||| ||||    
T  3913365 gacaaaaataaaacgatattcattcattcaaatcgatagagtacatcagatacaaacatcgctaaaaacgtaaagggtgcatct 3913448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 324 - 407
Target Start/End: Original strand, 9341442 - 9341525
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||| ||||||| |||||||||||||| ||| |||||||| |||||||||||| ||||||||||||||||||||||||    
T  9341442 gacaaaaacaaaacgatactcattcattcaaatcgatagagtacatcagatacaaacattgctaaaaacgtaaagggtgaatct 9341525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 327 - 407
Target Start/End: Complemental strand, 34018856 - 34018776
Alignment:
Q  327 aaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    ||||||| ||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||| ||| |||||    
T  34018856 aaaaacaaaacgatattcattcatttaaattgatagagtatattagatacaaacatcgctaaaaacgtaaatggtaaatct 34018776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 327 - 405
Target Start/End: Original strand, 21426480 - 21426558
Alignment:
Q  327 aaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaat 405  Q
    |||||||  ||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||| |||||||    
T  21426480 aaaaacaacacgatattcattcattcaaatcgatagagtacatcagatacaaacatcgctaaaaacgtaaacggtgaat 21426558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 327 - 407
Target Start/End: Original strand, 29255240 - 29255320
Alignment:
Q  327 aaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    ||||||| | ||||||||||||| |||||||||| |||||||| | |||||||||||||||||||||||| ||||||||||    
T  29255240 aaaaacaaagcgatattcattcagtcaaattgatggagtacatcaaatacaaacatcgctaaaaacgtaatgggtgaatct 29255320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 335 - 407
Target Start/End: Complemental strand, 30894886 - 30894814
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||||||||||||||| ||| || ||||| ||||||||||||||||||||||||||||| |||||||    
T  30894886 aacgatattcattcattcaaatcgatggaatacatcagatacaaacatcgctaaaaacgtaaaggatgaatct 30894814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 324 - 407
Target Start/End: Original strand, 67792 - 67875
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||| | |||| ||||||||||||||||| ||| ||||| || |||||||||||| ||||||||||||||||||||||||    
T  67792 gacaaaaataaaacggtattcattcattcaaatcgatagagtatatcagatacaaacattgctaaaaacgtaaagggtgaatct 67875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 324 - 407
Target Start/End: Original strand, 14174862 - 14174945
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||| |||||||||||||||||||||| |||  | ||||| |||||||||||| |||||||||||||| |||||||||    
T  14174862 gacaaaaacaaaacgatattcattcattcaaatcgatatattacatcagatacaaacattgctaaaaacgtaaaaggtgaatct 14174945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 324 - 407
Target Start/End: Original strand, 14179398 - 14179481
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||| |||||||||||||||||||||| |||  | ||||| |||||||||||| |||||||||||||| |||||||||    
T  14179398 gacaaaaacaaaacgatattcattcattcaaatcgatatattacatcagatacaaacattgctaaaaacgtaaaaggtgaatct 14179481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 324 - 407
Target Start/End: Original strand, 29319668 - 29319751
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||| || |||||||||||||||||||| ||  |||| || ||||||||||||||||||||||||||| |||||||||    
T  29319668 gacaaaaacaaaatgatattcattcattcaaattaataaagtatatcagatacaaacatcgctaaaaacgtaaaaggtgaatct 29319751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 324 - 405
Target Start/End: Original strand, 7514994 - 7515074
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaat 405  Q
    |||||||||| |||||||||||||||||||||| ||| |||| ||| ||||| ||| |||||||||||||||||||||||||    
T  7514994 gacaaaaacaaaacgatattcattcattcaaatcgatagagtgcatcagatataaa-atcgctaaaaacgtaaagggtgaat 7515074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 339 - 407
Target Start/End: Complemental strand, 23128902 - 23128834
Alignment:
Q  339 atattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||||||||||| ||  |||||||| ||||||||||||||||||||| |||||||||||||||    
T  23128902 atattcattcattcaaatagacagagtacatcagatacaaacatcgctaaaaatgtaaagggtgaatct 23128834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 325 - 404
Target Start/End: Complemental strand, 31297117 - 31297039
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaa 404  Q
    ||||||||| |||||||||||||||||||||||||| || ||||| ||| |  |||||||||||||||||||||||||||    
T  31297117 acaaaaacaaaacgatattcattcattcaaattgatagaatacatcaga-atcaacatcgctaaaaacgtaaagggtgaa 31297039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 324 - 407
Target Start/End: Complemental strand, 32060175 - 32060092
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||| | ||||||||||||||||||||||||||  | ||||| |||||||||| |||||||||| ||||||||| |||||    
T  32060175 gacaaaaataaaacgatattcattcattcaaattgatatattacatcagatacaaacttcgctaaaaatgtaaagggtaaatct 32060092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 335 - 405
Target Start/End: Original strand, 30608317 - 30608387
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaat 405  Q
    ||||| |||||||||||||||||||| ||||| || |||||||||||||| |||||||||||||| |||||    
T  30608317 aacgacattcattcattcaaattgatagagtaaatcagatacaaacatcgttaaaaacgtaaaggatgaat 30608387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 324 - 407
Target Start/End: Complemental strand, 30493831 - 30493748
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||| | |||| ||||||||||||||||| ||| || || || |||  | ||||||||||||||||||||||||||||||    
T  30493831 gacaaaaataaaacgttattcattcattcaaatagatagaatatatcagaatctaacatcgctaaaaacgtaaagggtgaatct 30493748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 325 - 407
Target Start/End: Original strand, 34185486 - 34185567
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    ||||||| | || ||||||||||||||||||||||| ||||| || |||| | |||||||||||||| ||||| |||||||||    
T  34185486 acaaaaataaaatgatattcattcattcaaattgatagagtatatcagattc-aacatcgctaaaaaagtaaaaggtgaatct 34185567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 325 - 405
Target Start/End: Complemental strand, 28981474 - 28981395
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaat 405  Q
    ||||||| | |||||||||||| | ||||||||||| || ||||| |||  ||| ||||||||||||||||||||||||||    
T  28981474 acaaaaataaaacgatattcatacgttcaaattgatagaatacatcagaatcaa-catcgctaaaaacgtaaagggtgaat 28981395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 405
Target Start/End: Complemental strand, 127963 - 127885
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaat 405  Q
    ||||||| | |||||||||  ||||||||||||||| |||||||| ||||  ||||||  ||||||||||||| |||||||    
T  127963 acaaaaataaaacgatatttgttcattcaaattgatagagtacatcagatgtaaacat--ctaaaaacgtaaaaggtgaat 127885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Complemental strand, 4660888 - 4660854
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  4660888 aacgatattcattcattcaaattgatagagtacat 4660854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Complemental strand, 5146386 - 5146352
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  5146386 aacgatattcattcattcaaattgatagagtacat 5146352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 369
Target Start/End: Original strand, 11321338 - 11321380
Alignment:
Q  327 aaaaacagaacgatattcattcattcaaattgatcgagtacat 369  Q
    ||||||| ||||||||| |||||||||||||||| ||||||||    
T  11321338 aaaaacaaaacgatatttattcattcaaattgatagagtacat 11321380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Original strand, 12653979 - 12654013
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  12653979 aacgatattcattcattcaaattgatagagtacat 12654013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Original strand, 15589786 - 15589820
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  15589786 aacgatattcattcattcaaattgatagagtacat 15589820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Original strand, 19402513 - 19402547
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  19402513 aacgatattcattcattcaaattgatagagtacat 19402547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Complemental strand, 23654709 - 23654675
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  23654709 aacgatattcattcattcaaattgatagagtacat 23654675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Complemental strand, 30813517 - 30813483
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  30813517 aacgatattcattcattcaaattgatagagtacat 30813483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 337 - 370
Target Start/End: Complemental strand, 4394228 - 4394195
Alignment:
Q  337 cgatattcattcattcaaattgatcgagtacatt 370  Q
    |||||||||||||||||||||||| |||||||||    
T  4394228 cgatattcattcattcaaattgatagagtacatt 4394195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 378 - 407
Target Start/End: Complemental strand, 6957386 - 6957357
Alignment:
Q  378 aacatcgctaaaaacgtaaagggtgaatct 407  Q
    ||||||||||||||||||||||||||||||    
T  6957386 aacatcgctaaaaacgtaaagggtgaatct 6957357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 366
Target Start/End: Complemental strand, 19164862 - 19164821
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagta 366  Q
    ||||||||| ||||||||||||||||||||||| || |||||    
T  19164862 acaaaaacaaaacgatattcattcattcaaattcatagagta 19164821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Complemental strand, 5545116 - 5545084
Alignment:
Q  338 gatattcattcattcaaattgatcgagtacatt 370  Q
    ||||||||||||||||||||||| |||||||||    
T  5545116 gatattcattcattcaaattgatagagtacatt 5545084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 337 - 369
Target Start/End: Complemental strand, 6127975 - 6127943
Alignment:
Q  337 cgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||| ||||||||    
T  6127975 cgatattcattcattcaaattgatagagtacat 6127943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 2e-28; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 327 - 407
Target Start/End: Original strand, 45568239 - 45568319
Alignment:
Q  327 aaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    ||||||| |||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  45568239 aaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacatcgctaaaaacgtaaagggtgaatct 45568319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 324 - 407
Target Start/End: Original strand, 6954487 - 6954570
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||| |||||||||||||||||||||| ||| |||||| | |||||||||||||||||||||||||||||||||||||    
T  6954487 gacaaaaacaaaacgatattcattcattcaaatcgatagagtacttcagatacaaacatcgctaaaaacgtaaagggtgaatct 6954570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 324 - 407
Target Start/End: Original strand, 52922908 - 52922991
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||| |||||||||||||||||||||| ||| |||||||| | |||||||||||||||||||||||||||||||||||    
T  52922908 gacaaaaacaaaacgatattcattcattcaaatcgatagagtacatcaaatacaaacatcgctaaaaacgtaaagggtgaatct 52922991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 325 - 407
Target Start/End: Original strand, 46304313 - 46304394
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    ||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||||    
T  46304313 acaaaaacaaaacgatattcattcattcaaattgatagagtacatcagatacaaacat-gctaaaaacgtaaagggtgaatct 46304394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 324 - 405
Target Start/End: Complemental strand, 43017185 - 43017104
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaat 405  Q
    |||||||||| |||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||| |||||    
T  43017185 gacaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacatcgctaaaaacgtaaaggatgaat 43017104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 324 - 407
Target Start/End: Complemental strand, 21313333 - 21313250
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||| |||||||||||||||||||||||||| ||||| || ||||||||||| ||||||||| |||||||||||||||    
T  21313333 gacaaaaacaaaacgatattcattcattcaaattgattgagtatatcagatacaaacaccgctaaaaatgtaaagggtgaatct 21313250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 325 - 407
Target Start/End: Original strand, 36461229 - 36461311
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||| || ||| ||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  36461229 acaaaatcaaaacaatattaattcattcaaattgatagagtacattagatacaaacatcgctaaaaatgtaaagggtgaatct 36461311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 324 - 405
Target Start/End: Original strand, 9797325 - 9797406
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaat 405  Q
    |||||||||| |||||||||||||||||||||| |||  ||||||| |||||||||||||||||| ||||||||||||||||    
T  9797325 gacaaaaacaaaacgatattcattcattcaaatcgatatagtacatcagatacaaacatcgctaagaacgtaaagggtgaat 9797406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 335 - 404
Target Start/End: Complemental strand, 54149277 - 54149208
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaa 404  Q
    |||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||    
T  54149277 aacgatattcattcattcaaatcgatagagtacatcagatacaaacatcgctaaaaacgtaaagggtgaa 54149208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 324 - 407
Target Start/End: Complemental strand, 10108533 - 10108450
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||| | |||||||||||||||||||||| ||| |||||||| | |||||||||| ||||||||||||||||||||||||    
T  10108533 gacaaaaataaaacgatattcattcattcaaatcgatagagtacatcaaatacaaacatagctaaaaacgtaaagggtgaatct 10108450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 324 - 407
Target Start/End: Original strand, 21533600 - 21533683
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||| || ||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||| ||| |||||    
T  21533600 gacaaaaacaaaatgatattcattcattcaaatcgatagagtacatcagatacaaacatcgctaaaaacgtaaaaggtaaatct 21533683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 324 - 407
Target Start/End: Original strand, 36910557 - 36910640
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||| | |||||||||||||||||||||| ||| |||||||| ||||| ||||||||| |||||||||||||||||||||    
T  36910557 gacaaaaataaaacgatattcattcattcaaatcgatagagtacatcagatataaacatcgcaaaaaacgtaaagggtgaatct 36910640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 324 - 407
Target Start/End: Complemental strand, 47896448 - 47896365
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||| ||||||||||||| |||||||||||| |||||||||| ||||||||||| |||||||| ||||||| ||||||    
T  47896448 gacaaaaacaaaacgatattcattgattcaaattgatagagtacattaaatacaaacatccctaaaaacttaaagggagaatct 47896365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 325 - 407
Target Start/End: Complemental strand, 9998763 - 9998681
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    ||||||| | |||||||||||||||||||||| ||| |||||||| | |||||||||| ||||||||||||||||||||||||    
T  9998763 acaaaaataaaacgatattcattcattcaaatcgatagagtacatcaaatacaaacatagctaaaaacgtaaagggtgaatct 9998681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 326 - 407
Target Start/End: Original strand, 48650527 - 48650608
Alignment:
Q  326 caaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||| || ||||||||||||||||||| ||| |||||||| ||||||||| ||||||||||| |||||||||||||||    
T  48650527 caaaaacaaaatgatattcattcattcaaatcgatagagtacatcagatacaaatatcgctaaaaatgtaaagggtgaatct 48650608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 325 - 405
Target Start/End: Complemental strand, 40487621 - 40487541
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaat 405  Q
    ||||||||| |||||||||||||||||||||| ||| ||||| || |||||||||||||||||||||| ||||| ||||||    
T  40487621 acaaaaacaaaacgatattcattcattcaaatcgatagagtatatcagatacaaacatcgctaaaaacataaagagtgaat 40487541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 324 - 407
Target Start/End: Complemental strand, 10229773 - 10229690
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||| | |||||||||||||||||||||| ||| ||||| || | |||||||||| ||||||||||||||||||||||||    
T  10229773 gacaaaaataaaacgatattcattcattcaaatcgatagagtatatcaaatacaaacatagctaaaaacgtaaagggtgaatct 10229690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 324 - 407
Target Start/End: Complemental strand, 33580177 - 33580094
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    ||||||||||  ||||||||||||||||||||| ||| || ||||| | ||||||||||| |||||||||||||||||||||||    
T  33580177 gacaaaaacaagacgatattcattcattcaaatcgatagattacatcaaatacaaacatcactaaaaacgtaaagggtgaatct 33580094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 324 - 407
Target Start/End: Complemental strand, 38546096 - 38546013
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||| ||||||||| |||||||||||| ||| || ||| | ||||||||||||| |||||||||||||||||||||||    
T  38546096 gacaaaaacaaaacgatatttattcattcaaatcgatagattacctcagatacaaacatcactaaaaacgtaaagggtgaatct 38546013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 43488386 - 43488464
Alignment:
Q  328 aaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||| | |||||||    
T  43488386 aaaacaaaacgatattcattcattcaaatcgatagagtacattagatacaaacatcgct-aaaacgtaaatgatgaatct 43488464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 340 - 407
Target Start/End: Original strand, 44959780 - 44959847
Alignment:
Q  340 tattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    ||||||||||||||||| ||| || ||||| |||||||||||||||||||||||||||||||||||||    
T  44959780 tattcattcattcaaatcgatagaatacatcagatacaaacatcgctaaaaacgtaaagggtgaatct 44959847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 324 - 407
Target Start/End: Original strand, 47041839 - 47041922
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||| || ||||||||||||||||||| ||| || ||||| |||||||||||| |||||||||||||| |||||||||    
T  47041839 gacaaaaacaaaatgatattcattcattcaaatagatagattacatcagatacaaacattgctaaaaacgtaaaaggtgaatct 47041922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 327 - 401
Target Start/End: Complemental strand, 37041062 - 37040988
Alignment:
Q  327 aaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggt 401  Q
    ||||||| ||||||||||||||||||| |||||| |||||||| ||||||||| ||||||| |||||||||||||    
T  37041062 aaaaacaaaacgatattcattcattcagattgatagagtacatcagatacaaaaatcgctagaaacgtaaagggt 37040988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 325 - 407
Target Start/End: Complemental strand, 40556998 - 40556916
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    ||||||||| |||||||||||||||||||||| ||   ||||||| | |||||||||||||||||||| ||||||||||||||    
T  40556998 acaaaaacaaaacgatattcattcattcaaatcgacatagtacatcaaatacaaacatcgctaaaaacataaagggtgaatct 40556916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 335 - 407
Target Start/End: Original strand, 7448716 - 7448788
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||||||||||||||||||| |||||||  ||||| |||||||| |||||||||||| |||||||||    
T  7448716 aacgatattcattcattcaaattgatagagtacaacagatataaacatcgataaaaacgtaaatggtgaatct 7448788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 335 - 407
Target Start/End: Original strand, 7456858 - 7456930
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||||||||||||||||||| |||||||  ||||| |||||||| |||||||||||| |||||||||    
T  7456858 aacgatattcattcattcaaattgatagagtacaacagatataaacatcgataaaaacgtaaatggtgaatct 7456930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 339 - 407
Target Start/End: Original strand, 31271638 - 31271706
Alignment:
Q  339 atattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    ||||||||||||| |||||||| ||| |||| ||||||||| |||||||||||||||||||||||||||    
T  31271638 atattcattcatttaaattgatagagaacatcagatacaaatatcgctaaaaacgtaaagggtgaatct 31271706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 324 - 407
Target Start/End: Complemental strand, 21431912 - 21431827
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaa--acatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||| | ||||| |||||||||||||||| ||| |||||||| ||||||||  ||||||||||||||||||| |||||||||    
T  21431912 gacaaaaataaaacgacattcattcattcaaatcgatagagtacatcagatacaaacacatcgctaaaaacgtaaatggtgaatct 21431827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 324 - 405
Target Start/End: Complemental strand, 10233367 - 10233286
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaat 405  Q
    |||||||| | |||||||||||||||||||||| ||| |||||||| | |||||||||| | ||||||| ||||||||||||    
T  10233367 gacaaaaataaaacgatattcattcattcaaatcgatagagtacatcaaatacaaacatagataaaaacataaagggtgaat 10233286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 324 - 407
Target Start/End: Complemental strand, 4711779 - 4711696
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||| | |||||||||||||||  ||||| ||| |||||||| ||||||||||||| |||||||| |||||| |||||||    
T  4711779 gacaaaaataaaacgatattcattcaaccaaatcgatagagtacatcagatacaaacatcactaaaaacataaaggatgaatct 4711696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 325 - 407
Target Start/End: Complemental strand, 14859791 - 14859704
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaa-----acatcgctaaaaacgtaaagggtgaatct 407  Q
    ||||||||||||| |||||||||||||||||||||| || ||||| ||||||||     ||||||||||||| ||| |||||||||||    
T  14859791 acaaaaacagaacaatattcattcattcaaattgatagaatacatcagatacaataatgacatcgctaaaaatgtatagggtgaatct 14859704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 324 - 398
Target Start/End: Original strand, 20464756 - 20464835
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtac-----attagatacaaacatcgctaaaaacgtaaag 398  Q
    |||||||||| || ||||||||||||||||||||||| ||||||     || ||||||||||||||||||||||||||||    
T  20464756 gacaaaaacaaaatgatattcattcattcaaattgatagagtacatcagatcagatacaaacatcgctaaaaacgtaaag 20464835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 325 - 380
Target Start/End: Original strand, 23799740 - 23799794
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaac 380  Q
    ||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||    
T  23799740 acaaaaacaaaacgatattcattcattcaaattgatagagtaca-tagatacaaac 23799794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 324 - 405
Target Start/End: Original strand, 12050439 - 12050520
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaat 405  Q
    |||||||||| ||||||||||||||||| ||||  || | |||||||  ||| ||||||| ||||||| |||||||||||||    
T  12050439 gacaaaaacaaaacgatattcattcatttaaatcaatagggtacattgaatataaacatctctaaaaatgtaaagggtgaat 12050520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 324 - 407
Target Start/End: Original strand, 20608689 - 20608777
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacatt-----agatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||| ||||||||||||||| |||||||||  |||||||||     |||||||||  |||||| ||||||||||| |||||||    
T  20608689 gacaaaaacaaaacgatattcattcaatcaaattgagagagtacattacatcagatacaaaattcgctagaaacgtaaaggatgaatct 20608777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 324 - 407
Target Start/End: Original strand, 628715 - 628797
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||| || ||||||||||||||||||||||| || ||||| | | |  || ||||||||||||||||||| |||||||    
T  628715 gacaaaaacaaaatgatattcattcattcaaattgatagaatacatca-aaatcaagatcgctaaaaacgtaaaggatgaatct 628797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 341 - 407
Target Start/End: Complemental strand, 18011300 - 18011234
Alignment:
Q  341 attcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    ||||||||||||| ||||||| | | |||| |||||||| ||||||||||||||||| | |||||||    
T  18011300 attcattcattcagattgatccaatgcattggatacaaagatcgctaaaaacgtaaaagatgaatct 18011234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 325 - 407
Target Start/End: Complemental strand, 35175699 - 35175618
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    ||||||| | |||||||||||||||||||||||||| || ||||| | | |  |||||||||||||||||||| | |||||||    
T  35175699 acaaaaataaaacgatattcattcattcaaattgatagaatacatcata-atcaacatcgctaaaaacgtaaaagatgaatct 35175618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 325 - 407
Target Start/End: Original strand, 50194128 - 50194209
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||| || || |||||||||||||||||||||||  | ||||| |||  ||| |||||||||||||||||||| |||||||    
T  50194128 acaaaagcaaaatgatattcattcattcaaattgatataatacatcagaatcaa-catcgctaaaaacgtaaaggatgaatct 50194209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 366
Target Start/End: Original strand, 953337 - 953378
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagta 366  Q
    ||||||||| ||||||||||||||||||| ||||||||||||    
T  953337 acaaaaacaaaacgatattcattcattcagattgatcgagta 953378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 397
Target Start/End: Original strand, 35864753 - 35864830
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacatta-----gatacaaacatcgctaaaaacgtaaa 397  Q
    ||||||| | |||||||||| ||||||||||||||| |||||||| |     |||||||||||| |||||||||||||    
T  35864753 acaaaaataaaacgatattcgttcattcaaattgatagagtacatcacatcagatacaaacatctctaaaaacgtaaa 35864830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 325 - 369
Target Start/End: Original strand, 24396291 - 24396335
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacat 369  Q
    ||||||||| ||||||||||||| |||||||||||| ||||||||    
T  24396291 acaaaaacaaaacgatattcattaattcaaattgatagagtacat 24396335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 335 - 370
Target Start/End: Complemental strand, 55455322 - 55455287
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacatt 370  Q
    |||||||||||||||||||||||||| |||||||||    
T  55455322 aacgatattcattcattcaaattgatagagtacatt 55455287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Original strand, 1074563 - 1074597
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  1074563 aacgatattcattcattcaaattgatagagtacat 1074597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Complemental strand, 2192538 - 2192504
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  2192538 aacgatattcattcattcaaattgatagagtacat 2192504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Complemental strand, 11819544 - 11819510
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  11819544 aacgatattcattcattcaaattgatagagtacat 11819510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 399
Target Start/End: Original strand, 12149575 - 12149649
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagg 399  Q
    ||||||| | |||||||||| ||||||||||| |||  | |||||  ||||||| ||| ||||||||||||||||    
T  12149575 acaaaaataaaacgatattccttcattcaaatcgataaaatacatctgatacaagcatagctaaaaacgtaaagg 12149649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Original strand, 13701671 - 13701705
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  13701671 aacgatattcattcattcaaattgatagagtacat 13701705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Complemental strand, 14585922 - 14585888
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  14585922 aacgatattcattcattcaaattgatagagtacat 14585888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Complemental strand, 19645650 - 19645616
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  19645650 aacgatattcattcattcaaattgatagagtacat 19645616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Original strand, 24483365 - 24483399
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  24483365 aacgatattcattcattcaaattgatagagtacat 24483399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Complemental strand, 48401552 - 48401518
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  48401552 aacgatattcattcattcaaattgatagagtacat 48401518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Original strand, 49627773 - 49627807
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  49627773 aacgatattcattcattcaaattgatagagtacat 49627807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Original strand, 50981135 - 50981169
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  50981135 aacgatattcattcattcaaattgatagagtacat 50981169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Original strand, 51084269 - 51084303
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  51084269 aacgatattcattcattcaaattgatagagtacat 51084303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Original strand, 54706401 - 54706435
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  54706401 aacgatattcattcattcaaattgatagagtacat 54706435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Original strand, 55090368 - 55090402
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  55090368 aacgatattcattcattcaaattgatagagtacat 55090402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 33076734 - 33076690
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||| || ||||||||||||||||||||||| ||||||||    
T  33076734 gacaaaaaca-aatgatattcattcattcaaattgatagagtacat 33076690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 20200736 - 20200768
Alignment:
Q  338 gatattcattcattcaaattgatcgagtacatt 370  Q
    ||||||||||||||||||||||| |||||||||    
T  20200736 gatattcattcattcaaattgatagagtacatt 20200768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 20202918 - 20202950
Alignment:
Q  338 gatattcattcattcaaattgatcgagtacatt 370  Q
    ||||||||||||||||||||||| |||||||||    
T  20202918 gatattcattcattcaaattgatagagtacatt 20202950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 369
Target Start/End: Complemental strand, 41818522 - 41818478
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||| || |||||||||||||||||||||||||| || |||||    
T  41818522 acaaaagcaaaacgatattcattcattcaaattgatagaatacat 41818478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 357
Target Start/End: Complemental strand, 47733401 - 47733369
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaatt 357  Q
    ||||||||| |||||||||||||||||||||||    
T  47733401 acaaaaacaaaacgatattcattcattcaaatt 47733369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 7e-28; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 324 - 407
Target Start/End: Original strand, 49504386 - 49504469
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||| |||||||||||||||||||||| ||| |||||||| |||||||||||||| ||||||||||||||||||||||    
T  49504386 gacaaaaacaaaacgatattcattcattcaaatcgatagagtacataagatacaaacatcgttaaaaacgtaaagggtgaatct 49504469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 325 - 407
Target Start/End: Original strand, 11462274 - 11462356
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    ||||||||| |||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||| |||||||||    
T  11462274 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacatcgctaaaaacgtaaatggtgaatct 11462356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 324 - 397
Target Start/End: Complemental strand, 26535637 - 26535564
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaa 397  Q
    |||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||||    
T  26535637 gacaaaaacaaaacgatattcattcattcaaattgatagagtacatcagatacaaacatagctaaaaacgtaaa 26535564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 335 - 407
Target Start/End: Original strand, 51373660 - 51373732
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||| |||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||    
T  51373660 aacgatgttcattcattcaaattgataaagtacattagatacaaacatcgataaaaacgtaaagggtgaatct 51373732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 324 - 407
Target Start/End: Original strand, 7337454 - 7337537
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||| | |||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||  ||||||||||||||    
T  7337454 gacaaaaatataacgatattcattcattcaaatcgatagagtacatcagatacaaacatcgctaaaaatataaagggtgaatct 7337537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 324 - 407
Target Start/End: Original strand, 8211098 - 8211181
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||| ||| ||||||||||| |||| | ||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  8211098 gacaaaaacaaaacaatattcattcaatcaattcgatagagtacattagatacaaacatcgctaaaaacgtaaagcgtgaatct 8211181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 324 - 407
Target Start/End: Original strand, 29738456 - 29738538
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||| ||||||||||| |||||||||| ||| |||||||| ||||||||||||| |||||||||||||||||||||||    
T  29738456 gacaaaaaca-aacgatattcaatcattcaaatcgatagagtacatcagatacaaacatcactaaaaacgtaaagggtgaatct 29738538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 325 - 407
Target Start/End: Complemental strand, 4413414 - 4413332
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    ||||||||| ||||||||| |||| ||||||| ||| |||||||| ||||||||||||||||||||||||||||| |||||||    
T  4413414 acaaaaacaaaacgatatttattcgttcaaatcgatagagtacatcagatacaaacatcgctaaaaacgtaaaggatgaatct 4413332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 325 - 407
Target Start/End: Complemental strand, 21687678 - 21687596
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    ||||||||| |||||||||||||||||||||| ||| || ||||| ||||||||||||||||| ||||||||| |||||||||    
T  21687678 acaaaaacaaaacgatattcattcattcaaatcgatagattacatcagatacaaacatcgctagaaacgtaaaaggtgaatct 21687596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 324 - 405
Target Start/End: Complemental strand, 44915940 - 44915859
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaat 405  Q
    |||||||| | || ||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||| |||||    
T  44915940 gacaaaaataaaatgatattcattcattcaaattgatagagtacatcagatacaaacatcactaaaaacgtaaaggatgaat 44915859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 335 - 407
Target Start/End: Original strand, 35484193 - 35484265
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||| |||||||| ||||||    
T  35484193 aacgatattcattcattcaaatcgatagagtacatcagatacaaacatcgctaaaaatgtaaagggcgaatct 35484265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 325 - 404
Target Start/End: Original strand, 10776253 - 10776332
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaa 404  Q
    ||||||||| || ||||||| ||||||||||||||| ||||| || |||| |||||||||||||||||||||||||||||    
T  10776253 acaaaaacaaaatgatattcgttcattcaaattgatagagtatatcagatgcaaacatcgctaaaaacgtaaagggtgaa 10776332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 324 - 407
Target Start/End: Original strand, 34878069 - 34878152
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||| |||||||||||||||||||||| ||| || ||||| ||||  ||||||||||||||||||||| |||||||||    
T  34878069 gacaaaaacaaaacgatattcattcattcaaatcgatagattacatcagatggaaacatcgctaaaaacgtaaaaggtgaatct 34878152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 324 - 406
Target Start/End: Complemental strand, 32395298 - 32395216
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatc 406  Q
    |||||||||| |||||||||||| ||||||||| ||| |||||||| | ||||||||| || |||||||||||||||||||||    
T  32395298 gacaaaaacaaaacgatattcatccattcaaatcgatagagtacatcaaatacaaacaccgttaaaaacgtaaagggtgaatc 32395216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 324 - 404
Target Start/End: Complemental strand, 50377624 - 50377544
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaa 404  Q
    |||||||||| ||||||||||||||||||||||||||    ||||| ||||| ||||||||||||||||||||||| ||||    
T  50377624 gacaaaaacaaaacgatattcattcattcaaattgataagatacatcagatataaacatcgctaaaaacgtaaaggatgaa 50377544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 327 - 406
Target Start/End: Complemental strand, 940536 - 940457
Alignment:
Q  327 aaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatc 406  Q
    ||||||| ||||||||||||||||| ||||  || |||||||| |||||||||||||||||||||| |||||| ||||||    
T  940536 aaaaacaaaacgatattcattcatttaaatcaatagagtacataagatacaaacatcgctaaaaacttaaaggatgaatc 940457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 324 - 407
Target Start/End: Complemental strand, 39888483 - 39888400
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||| |||||||||||||||| |||||||||  | ||||| ||||||||||||| || ||||||||||| ||||||||    
T  39888483 gacaaaaacaaaacgatattcattcatacaaattgatataatacatcagatacaaacatcactcaaaacgtaaagagtgaatct 39888400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 324 - 405
Target Start/End: Complemental strand, 45415859 - 45415778
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaat 405  Q
    |||||||||| ||||||||  ||||||||||| |||| |||||||| | ||||| | |||||||||||||||||||||||||    
T  45415859 gacaaaaacaaaacgatatcaattcattcaaaatgatagagtacatcatatacacatatcgctaaaaacgtaaagggtgaat 45415778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 324 - 399
Target Start/End: Complemental strand, 47133203 - 47133129
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagg 399  Q
    |||||||||| |||||||||||||||||||||||||| || ||||| ||| |  ||||||||||||||||||||||    
T  47133203 gacaaaaacaaaacgatattcattcattcaaattgatagaatacatcaga-atcaacatcgctaaaaacgtaaagg 47133129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 325 - 407
Target Start/End: Original strand, 19596252 - 19596334
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    ||||||||| || ||||||| |||||||||||  || || ||||||||||| ||| ||||||||||||||||| |||||||||    
T  19596252 acaaaaacaaaatgatattcgttcattcaaatcaatagattacattagatagaaatatcgctaaaaacgtaaaaggtgaatct 19596334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 335 - 407
Target Start/End: Original strand, 21947420 - 21947492
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||||||||||||||| ||| |||||||| | ||||||| |||| |||||| ||||||||| |||||    
T  21947420 aacgatattcattcattcaaatcgatagagtacatcatatacaaatatcgttaaaaatgtaaagggtaaatct 21947492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 335 - 403
Target Start/End: Original strand, 23289194 - 23289262
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtga 403  Q
    |||||||||||||||||||||| ||| || ||||| | ||||||||||||||||| |||||||| ||||    
T  23289194 aacgatattcattcattcaaatcgatagattacatcatatacaaacatcgctaaatacgtaaagagtga 23289262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 325 - 389
Target Start/End: Original strand, 36894200 - 36894264
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaa 389  Q
    ||||||||| |||||||||||||||||||||| ||| |||||||| | ||||||| |||||||||    
T  36894200 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatcaaatacaaatatcgctaaa 36894264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 340 - 407
Target Start/End: Complemental strand, 1742572 - 1742505
Alignment:
Q  340 tattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    ||||||||||||||||| | |  | ||||| ||||| |||||||||||||||||||||||||||||||    
T  1742572 tattcattcattcaaatcgctatattacatcagatataaacatcgctaaaaacgtaaagggtgaatct 1742505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 324 - 407
Target Start/End: Original strand, 15431458 - 15431540
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    ||||||| || || ||||||||||||||||| || |  |||||||| |||||||||||| |||||||||||||||| |||||||    
T  15431458 gacaaaatcaaaatgatattcattcattcaa-ttaacagagtacatcagatacaaacattgctaaaaacgtaaaggatgaatct 15431540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 16989668 - 16989589
Alignment:
Q  328 aaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||| |||||| ||||||||||||||| ||| || ||||| | ||||||||||| ||||||||||||| ||| |||||    
T  16989668 aaaacaaaacgattttcattcattcaaatcgatagattacatcatatacaaacatcactaaaaacgtaaatggtaaatct 16989589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 324 - 395
Target Start/End: Original strand, 32678935 - 32679005
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgta 395  Q
    |||||||||| |||||||||||||||||||||||||| || || |||||| |  ||||||||||||||||||    
T  32678935 gacaaaaacaaaacgatattcattcattcaaattgatggaatatattaga-atcaacatcgctaaaaacgta 32679005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 324 - 397
Target Start/End: Complemental strand, 27456790 - 27456712
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagat-----acaaacatcgctaaaaacgtaaa 397  Q
    |||||||||| |||||||||||||||||||||||||| |||||||| | ||     |||||||||| ||||||||||||    
T  27456790 gacaaaaacaaaacgatattcattcattcaaattgatagagtacatcacattcgacacaaacatcgttaaaaacgtaaa 27456712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 338 - 407
Target Start/End: Original strand, 13144618 - 13144686
Alignment:
Q  338 gatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    ||||| |||| |||||||||||| |||||||| | |||||||||||| |||||| |||||||||||||||    
T  13144618 gatatgcatttattcaaattgatagagtacatca-atacaaacatcgttaaaaatgtaaagggtgaatct 13144686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 325 - 404
Target Start/End: Complemental strand, 3228572 - 3228490
Alignment:
Q  325 acaaaaacagaacgatattcattcatt---caaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaa 404  Q
    ||||||||| |||||||||||||||||   |||||||||  ||||||| | ||| |||| ||||||||||||||||| |||||    
T  3228572 acaaaaacaaaacgatattcattcattattcaaattgataaagtacatcaaatataaacgtcgctaaaaacgtaaagagtgaa 3228490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 325 - 405
Target Start/End: Complemental strand, 14872939 - 14872859
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaat 405  Q
    ||||||||| || |||||||||||||| |||| ||| |||||||| | |||||||||||||  || | |||||||||||||    
T  14872939 acaaaaacaaaatgatattcattcatttaaatcgatagagtacatcacatacaaacatcgcagaagaagtaaagggtgaat 14872859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 339 - 407
Target Start/End: Original strand, 27579934 - 27580002
Alignment:
Q  339 atattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    ||||||||| |||||||||||| |||||||| | ||||||||| ||||||||   ||||||||||||||    
T  27579934 atattcatttattcaaattgatagagtacatcatatacaaacaacgctaaaatgataaagggtgaatct 27580002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 324 - 407
Target Start/End: Complemental strand, 12635470 - 12635388
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||| ||||||||||||||||| |||||||| || | ||| ||| |  ||||||||||||||| |||| |||||||||    
T  12635470 gacaaaaacaaaacgatattcattcatttaaattgatagaatgcatcaga-atcaacatcgctaaaaacataaaaggtgaatct 12635388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 327 - 407
Target Start/End: Complemental strand, 24583247 - 24583168
Alignment:
Q  327 aaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    ||||||| || ||||||||||||||||||| ||| || ||||| |||  |||  ||||||||||||||||||| |||||||    
T  24583247 aaaaacaaaatgatattcattcattcaaatcgatagaatacatcagaatcaag-atcgctaaaaacgtaaaggatgaatct 24583168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 325 - 369
Target Start/End: Original strand, 33486687 - 33486731
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacat 369  Q
    ||||||| | |||||||||||||||||||||||||| ||||||||    
T  33486687 acaaaaaaaaaacgatattcattcattcaaattgatagagtacat 33486731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 335 - 370
Target Start/End: Complemental strand, 12872066 - 12872031
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacatt 370  Q
    |||||||||||||||||||||||||| |||||||||    
T  12872066 aacgatattcattcattcaaattgatagagtacatt 12872031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 335 - 378
Target Start/End: Original strand, 40163232 - 40163275
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacattagatacaa 378  Q
    |||||||||||||||||||||||||| || ||||| ||||||||    
T  40163232 aacgatattcattcattcaaattgatagaatacatgagatacaa 40163275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Original strand, 4882038 - 4882072
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  4882038 aacgatattcattcattcaaattgatagagtacat 4882072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 358
Target Start/End: Original strand, 5685687 - 5685721
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattg 358  Q
    |||||||||| ||||||||||||||||||||||||    
T  5685687 gacaaaaacaaaacgatattcattcattcaaattg 5685721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Complemental strand, 13152887 - 13152853
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  13152887 aacgatattcattcattcaaattgatagagtacat 13152853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 118
Target Start/End: Complemental strand, 15830102 - 15830048
Alignment:
Q  65 tatgctggc-tgcccgctccaagttgagagttgggccatgggatttgggtgaagg 118  Q
    ||||||||| ||||||||||||||||||||||| |||| ||||  ||||||||||    
T  15830102 tatgctggcctgcccgctccaagttgagagttgtgccacgggacatgggtgaagg 15830048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 118
Target Start/End: Complemental strand, 15831830 - 15831776
Alignment:
Q  65 tatgctggc-tgcccgctccaagttgagagttgggccatgggatttgggtgaagg 118  Q
    ||||||||| ||||||||||||||||||||||| |||| ||||  ||||||||||    
T  15831830 tatgctggcctgcccgctccaagttgagagttgtgccacgggacatgggtgaagg 15831776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 118
Target Start/End: Complemental strand, 15833557 - 15833503
Alignment:
Q  65 tatgctggc-tgcccgctccaagttgagagttgggccatgggatttgggtgaagg 118  Q
    ||||||||| ||||||||||||||||||||||| |||| ||||  ||||||||||    
T  15833557 tatgctggcctgcccgctccaagttgagagttgtgccacgggacatgggtgaagg 15833503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Original strand, 25032764 - 25032798
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  25032764 aacgatattcattcattcaaattgatagagtacat 25032798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Complemental strand, 29205728 - 29205694
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  29205728 aacgatattcattcattcaaattgatagagtacat 29205694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Complemental strand, 44517608 - 44517574
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  44517608 aacgatattcattcattcaaattgatagagtacat 44517574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 407
Target Start/End: Complemental strand, 31984449 - 31984379
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    ||||||||||||||||| |||| ||  |||||||| | ||||| |||| | |||||||||||||||| |||||    
T  31984449 aacgatattcattcatttaaatcga--gagtacatcaaatacacacattgttaaaaacgtaaagggtaaatct 31984379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 41081478 - 41081523
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||| || ||||||||||||||||||| ||| ||||||||    
T  41081478 gacaaaaacaaaatgatattcattcattcaaatcgatagagtacat 41081523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 356
Target Start/End: Complemental strand, 5984117 - 5984085
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaat 356  Q
    |||||||||| ||||||||||||||||||||||    
T  5984117 gacaaaaacaaaacgatattcattcattcaaat 5984085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 407
Target Start/End: Complemental strand, 24583443 - 24583364
Alignment:
Q  327 aaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    ||||||| || ||||||||||||||||||| ||| || ||||| ||| |  || ||||||||||| ||||||| |||||||    
T  24583443 aaaaacaaaatgatattcattcattcaaatcgatagaatacatcaga-atcaagatcgctaaaaatgtaaaggatgaatct 24583364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 407
Target Start/End: Original strand, 35461846 - 35461928
Alignment:
Q  327 aaaaacagaacgatattcattca--ttcaaattgatcgagtacattagatacaaa-catcgctaaaaacgtaaagggtgaatct 407  Q
    ||||||| |||||||||||| ||  |||||||||||  ||||||| | ||||||| |||| ||||||| |||||||||||||||    
T  35461846 aaaaacaaaacgatattcat-caggttcaaattgataaagtacatcaaatacaaaacatcactaaaaatgtaaagggtgaatct 35461928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 73 - 101
Target Start/End: Complemental strand, 46627299 - 46627271
Alignment:
Q  73 ctgcccgctccaagttgagagttgggcca 101  Q
    |||||||||||||||||||||||||||||    
T  46627299 ctgcccgctccaagttgagagttgggcca 46627271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 324 - 407
Target Start/End: Original strand, 71661 - 71744
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||| || |||| ||| |||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||    
T  71661 gacaaaaacaaaaagatactcagtcattcaaattgatagagtacatcagatacaaacatcgctagaaacgtaaagggtgaatct 71744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 325 - 407
Target Start/End: Original strand, 9834 - 9916
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    ||||| ||| ||| |||||||||||||||||| ||| |||||||  |||||||||||||||||||||||||||||||||||||    
T  9834 acaaagacaaaacaatattcattcattcaaatcgatagagtacaccagatacaaacatcgctaaaaacgtaaagggtgaatct 9916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 325 - 407
Target Start/End: Complemental strand, 38357 - 38270
Alignment:
Q  325 acaaaaacagaacgatattcattcattc-----aaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    ||||||||| ||||||||||||||||||     ||||| || ||||| || ||||||||| ||||| ||||||||||| | |||||||    
T  38357 acaaaaacaaaacgatattcattcattcattcaaaattaatagagtatataagatacaaatatcgcaaaaaacgtaaatgatgaatct 38270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 325 - 406
Target Start/End: Original strand, 31066 - 31147
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatc 406  Q
    ||||||| | ||||||||||||||||||||||||||  ||||||| |||||||||||||||| |||||||||||| ||||||    
T  31066 acaaaaataaaacgatattcattcattcaaattgatatagtacatcagatacaaacatcgcttaaaacgtaaaggatgaatc 31147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 324 - 407
Target Start/End: Complemental strand, 15790 - 15707
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||||| ||||||||| |||| ||||||| ||| |||||||| || ||||||||||||||||||| ||||| ||||||||    
T  15790 gacaaaaacaaaacgatatttattccttcaaatcgattgagtacatcagttacaaacatcgctaaaaacataaagagtgaatct 15707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0884 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 325 - 407
Target Start/End: Original strand, 1765 - 1847
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||| |||| || ||||||||||||||||||| ||| || | ||| || ||||||||||||||||||||||||||||||||||    
T  1765 acaataacaaaatgatattcattcattcaaatcgatagaatgcatcaggtacaaacatcgctaaaaacgtaaagggtgaatct 1847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 353 - 407
Target Start/End: Complemental strand, 1613 - 1559
Alignment:
Q  353 aaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  1613 aaattgatagagtacatcagatacaaacatcgctaaaaacgtaaagggtgaatct 1559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 356
Target Start/End: Complemental strand, 1670 - 1638
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaat 356  Q
    |||||||||| ||||||||||||||||||||||    
T  1670 gacaaaaacaaaacgatattcattcattcaaat 1638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 325 - 407
Target Start/End: Original strand, 65834 - 65916
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    ||||||||| ||| ||||||||||||| |||||||   ||||||| | |||||||||||| |||||| |||||||||||||||    
T  65834 acaaaaacaaaacaatattcattcattgaaattgaaaaagtacatcatatacaaacatcggtaaaaatgtaaagggtgaatct 65916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 325 - 399
Target Start/End: Original strand, 71092 - 71166
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagg 399  Q
    ||||||| | || ||||||||||||||||| ||||| ||||  |||| |||||||||||||||||||||||||||    
T  71092 acaaaaataaaatgatattcattcattcaatttgatagagtcaattaaatacaaacatcgctaaaaacgtaaagg 71166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 327 - 407
Target Start/End: Complemental strand, 25576 - 25496
Alignment:
Q  327 aaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    ||||||| ||||||||| ||||||||||||| ||  ||| ||| |||||||||||||||||||||| ||| |||| |||||    
T  25576 aaaaacaaaacgatatttattcattcaaattaatatagtgcatcagatacaaacatcgctaaaaacttaaggggtaaatct 25496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 348 - 407
Target Start/End: Original strand, 32562 - 32621
Alignment:
Q  348 cattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    ||||||||  ||| |||||||| |||||||||||| ||||||||||||||||||||||||    
T  32562 cattcaaaacgatagagtacatcagatacaaacatggctaaaaacgtaaagggtgaatct 32621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 325 - 399
Target Start/End: Original strand, 57881 - 57954
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagg 399  Q
    ||||||||| ||||||||||||||||| |||||||| || ||||| ||| |  ||||||||||||||||||||||    
T  57881 acaaaaacaaaacgatattcattcatttaaattgatagaatacatcaga-attaacatcgctaaaaacgtaaagg 57954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 324 - 378
Target Start/End: Complemental strand, 8025 - 7971
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaa 378  Q
    |||||||| | |||||||||||||||||||||||||| |||||||| | ||||||    
T  8025 gacaaaaaaaaaacgatattcattcattcaaattgatagagtacatcaaatacaa 7971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 325 - 407
Target Start/End: Original strand, 92289 - 92370
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaatct 407  Q
    ||||||| | || |||| ||||||||||||||||||  | ||||||||| |  ||||||||||||||| ||||||||||||||    
T  92289 acaaaaataaaatgatactcattcattcaaattgatataatacattaga-attaacatcgctaaaaacataaagggtgaatct 92370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 53192 - 53237
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||| ||||||||||||||||||||||||||  |||||||    
T  53192 gacaaaaacaaaacgatattcattcattcaaattgatatagtacat 53237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 341 - 405
Target Start/End: Original strand, 14679 - 14743
Alignment:
Q  341 attcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagggtgaat 405  Q
    ||||||||||||||||||||  ||||||| | ||||||||||| |||||||  |||||| |||||    
T  14679 attcattcattcaaattgataaagtacatcatatacaaacatcactaaaaatataaaggatgaat 14743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 324 - 367
Target Start/End: Original strand, 36464 - 36507
Alignment:
Q  324 gacaaaaacagaacgatattcattcattcaaattgatcgagtac 367  Q
    |||||||||| |||||||||| ||||||||||||||| ||||||    
T  36464 gacaaaaacaaaacgatattctttcattcaaattgatagagtac 36507  T

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Target: scaffold0754 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0754
Description:

Target: scaffold0754; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 118
Target Start/End: Original strand, 3821 - 3875
Alignment:
Q  65 tatgctggc-tgcccgctccaagttgagagttgggccatgggatttgggtgaagg 118  Q
    ||||||||| ||||||||||||||||||||||| |||| ||||  ||||||||||    
T  3821 tatgctggcctgcccgctccaagttgagagttgtgccacgggacatgggtgaagg 3875  T

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Target: scaffold0634 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 399
Target Start/End: Complemental strand, 8810 - 8736
Alignment:
Q  325 acaaaaacagaacgatattcattcattcaaattgatcgagtacattagatacaaacatcgctaaaaacgtaaagg 399  Q
    ||||||| | |||||||||| ||||||||||| |||  | |||||  ||||||| ||| ||||||||||||||||    
T  8810 acaaaaataaaacgatattccttcattcaaatcgataaaatacatctgatacaagcatagctaaaaacgtaaagg 8736  T

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Target: scaffold0563 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0563
Description:

Target: scaffold0563; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 118
Target Start/End: Original strand, 671 - 725
Alignment:
Q  65 tatgctggc-tgcccgctccaagttgagagttgggccatgggatttgggtgaagg 118  Q
    ||||||||| ||||||||||||||||||||||| |||| ||||  ||||||||||    
T  671 tatgctggcctgcccgctccaagttgagagttgtgccacgggacatgggtgaagg 725  T

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Target: scaffold0563; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 118
Target Start/End: Original strand, 10353 - 10407
Alignment:
Q  65 tatgctggc-tgcccgctccaagttgagagttgggccatgggatttgggtgaagg 118  Q
    ||||||||| ||||||||||||||||||||||| |||| ||||  ||||||||||    
T  10353 tatgctggcctgcccgctccaagttgagagttgtgccacgggacatgggtgaagg 10407  T

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Target: scaffold0543 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 118
Target Start/End: Complemental strand, 130 - 76
Alignment:
Q  65 tatgctggc-tgcccgctccaagttgagagttgggccatgggatttgggtgaagg 118  Q
    ||||||||| ||||||||||||||||||||||| |||| ||||  ||||||||||    
T  130 tatgctggcctgcccgctccaagttgagagttgtgccacgggacatgggtgaagg 76  T

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Target: scaffold0536 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Complemental strand, 3355 - 3321
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  3355 aacgatattcattcattcaaattgatagagtacat 3321  T

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Target: scaffold0492 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 118
Target Start/End: Original strand, 713 - 767
Alignment:
Q  65 tatgctggc-tgcccgctccaagttgagagttgggccatgggatttgggtgaagg 118  Q
    ||||||||| ||||||||||||||||||||||| |||| ||||  ||||||||||    
T  713 tatgctggcctgcccgctccaagttgagagttgtgccacgggacatgggtgaagg 767  T

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Target: scaffold0294 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Original strand, 3728 - 3762
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  3728 aacgatattcattcattcaaattgatagagtacat 3762  T

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Target: scaffold0155 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Complemental strand, 35535 - 35501
Alignment:
Q  335 aacgatattcattcattcaaattgatcgagtacat 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  35535 aacgatattcattcattcaaattgatagagtacat 35501  T

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Target: scaffold0024 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Complemental strand, 36960 - 36928
Alignment:
Q  338 gatattcattcattcaaattgatcgagtacatt 370  Q
    ||||||||||||||||||||||| |||||||||    
T  36960 gatattcattcattcaaattgatagagtacatt 36928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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