View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10140_low_8 (Length: 257)

Name: NF10140_low_8
Description: NF10140
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10140_low_8
NF10140_low_8
[»] chr4 (44 HSPs)
chr4 (49-246)||(52848160-52848357)
chr4 (162-246)||(30261226-30261310)
chr4 (158-246)||(52957896-52957984)
chr4 (193-246)||(37624554-37624607)
chr4 (193-246)||(40345453-40345506)
chr4 (160-246)||(1819528-1819613)
chr4 (193-243)||(34413656-34413706)
chr4 (193-246)||(2493100-2493153)
chr4 (193-246)||(4505335-4505388)
chr4 (193-246)||(19451317-19451370)
chr4 (193-246)||(19930712-19930765)
chr4 (193-246)||(20448037-20448090)
chr4 (193-246)||(22220465-22220518)
chr4 (193-246)||(25231173-25231226)
chr4 (193-246)||(51733600-51733653)
chr4 (158-246)||(19878612-19878699)
chr4 (200-243)||(34316227-34316270)
chr4 (159-246)||(52253809-52253896)
chr4 (193-243)||(29519634-29519684)
chr4 (193-243)||(40837128-40837178)
chr4 (193-246)||(24157183-24157236)
chr4 (193-246)||(24940877-24940930)
chr4 (193-246)||(45043694-45043747)
chr4 (193-246)||(52915648-52915701)
chr4 (193-237)||(27943661-27943705)
chr4 (198-246)||(39982106-39982154)
chr4 (197-246)||(2728504-2728553)
chr4 (193-246)||(10573260-10573313)
chr4 (197-246)||(27886049-27886098)
chr4 (193-246)||(41496203-41496256)
chr4 (193-246)||(41920415-41920468)
chr4 (193-246)||(54042289-54042342)
chr4 (198-246)||(50621293-50621341)
chr4 (200-243)||(52162111-52162154)
chr4 (200-246)||(6991367-6991413)
chr4 (196-246)||(7906102-7906152)
chr4 (200-246)||(21864489-21864535)
chr4 (200-246)||(21920350-21920396)
chr4 (193-243)||(49089462-49089512)
chr4 (193-246)||(31917954-31918007)
chr4 (193-246)||(44571971-44572024)
chr4 (193-246)||(47817736-47817789)
chr4 (193-237)||(28734596-28734640)
chr4 (193-237)||(33033076-33033120)
[»] chr2 (44 HSPs)
chr2 (193-246)||(34546433-34546486)
chr2 (193-246)||(16807619-16807672)
chr2 (193-246)||(16846900-16846953)
chr2 (159-246)||(4132988-4133075)
chr2 (193-243)||(4051809-4051859)
chr2 (193-243)||(12566085-12566135)
chr2 (160-246)||(29396782-29396868)
chr2 (193-243)||(35799201-35799251)
chr2 (160-246)||(43427389-43427475)
chr2 (193-246)||(13561992-13562045)
chr2 (193-246)||(18579165-18579218)
chr2 (193-246)||(43971502-43971555)
chr2 (159-246)||(12342057-12342144)
chr2 (159-246)||(45082002-45082089)
chr2 (193-246)||(16792481-16792534)
chr2 (193-246)||(17703017-17703070)
chr2 (193-246)||(45301763-45301816)
chr2 (194-246)||(5717512-5717564)
chr2 (159-243)||(12394026-12394110)
chr2 (159-243)||(36177940-36178024)
chr2 (195-242)||(30855105-30855152)
chr2 (200-246)||(16463134-16463180)
chr2 (193-246)||(441333-441386)
chr2 (193-246)||(4288813-4288866)
chr2 (193-246)||(6220506-6220559)
chr2 (193-246)||(7028914-7028967)
chr2 (193-246)||(13788497-13788550)
chr2 (193-246)||(14833837-14833890)
chr2 (193-246)||(22620436-22620489)
chr2 (193-242)||(35046516-35046565)
chr2 (193-246)||(36685842-36685895)
chr2 (194-246)||(27964472-27964524)
chr2 (200-243)||(42004896-42004939)
chr2 (196-246)||(9391660-9391710)
chr2 (193-246)||(4658335-4658388)
chr2 (193-246)||(7042288-7042341)
chr2 (193-246)||(17695927-17695980)
chr2 (201-246)||(18719534-18719579)
chr2 (193-246)||(25383586-25383639)
chr2 (193-246)||(29808810-29808863)
chr2 (193-242)||(32254591-32254639)
chr2 (193-237)||(777768-777812)
chr2 (193-241)||(9366226-9366274)
chr2 (193-237)||(38926604-38926648)
[»] chr8 (33 HSPs)
chr8 (159-246)||(39463223-39463310)
chr8 (159-246)||(15160548-15160635)
chr8 (159-246)||(39698768-39698854)
chr8 (193-246)||(7839456-7839509)
chr8 (158-246)||(39765961-39766049)
chr8 (193-248)||(43724379-43724434)
chr8 (200-246)||(514879-514925)
chr8 (159-246)||(9880603-9880689)
chr8 (193-246)||(4760660-4760713)
chr8 (193-246)||(4989476-4989529)
chr8 (193-246)||(6374412-6374465)
chr8 (193-246)||(9304735-9304788)
chr8 (193-246)||(40228572-40228625)
chr8 (193-246)||(45358996-45359049)
chr8 (200-246)||(36921362-36921408)
chr8 (193-243)||(43448714-43448764)
chr8 (196-246)||(43974893-43974943)
chr8 (193-246)||(15227565-15227618)
chr8 (193-246)||(17920954-17921007)
chr8 (193-246)||(19438234-19438287)
chr8 (193-246)||(29025848-29025901)
chr8 (193-246)||(37559635-37559688)
chr8 (193-246)||(40362433-40362486)
chr8 (198-246)||(5295508-5295556)
chr8 (210-246)||(31899350-31899386)
chr8 (193-243)||(9812171-9812221)
chr8 (193-243)||(14234323-14234373)
chr8 (196-246)||(35356308-35356358)
chr8 (200-246)||(43084729-43084775)
chr8 (193-243)||(44713532-44713582)
chr8 (193-246)||(31693723-31693776)
chr8 (193-246)||(34796780-34796833)
chr8 (193-245)||(2803340-2803392)
[»] chr6 (21 HSPs)
chr6 (159-246)||(29399910-29399997)
chr6 (193-246)||(4850597-4850650)
chr6 (193-237)||(10540619-10540663)
chr6 (193-246)||(10520741-10520794)
chr6 (193-246)||(24163816-24163869)
chr6 (158-246)||(233997-234085)
chr6 (159-246)||(32193666-32193753)
chr6 (193-246)||(3988845-3988896)
chr6 (193-243)||(12063615-12063665)
chr6 (194-243)||(13503953-13504002)
chr6 (193-246)||(32429282-32429335)
chr6 (197-242)||(12322990-12323035)
chr6 (193-246)||(18737192-18737245)
chr6 (197-246)||(19674982-19675031)
chr6 (196-246)||(8030643-8030693)
chr6 (193-243)||(17552350-17552400)
chr6 (200-246)||(24556030-24556076)
chr6 (193-242)||(23259431-23259480)
chr6 (197-246)||(29713508-29713557)
chr6 (193-246)||(31233727-31233780)
chr6 (194-246)||(1502841-1502893)
[»] chr1 (46 HSPs)
chr1 (159-246)||(32807038-32807125)
chr1 (193-246)||(34032180-34032233)
chr1 (159-246)||(38531397-38531483)
chr1 (193-246)||(29567894-29567947)
chr1 (193-246)||(44258607-44258660)
chr1 (193-246)||(50249308-50249361)
chr1 (159-246)||(15822998-15823085)
chr1 (200-243)||(24884420-24884463)
chr1 (159-246)||(26755184-26755271)
chr1 (193-246)||(5463573-5463626)
chr1 (201-246)||(14593420-14593465)
chr1 (193-246)||(34047335-34047388)
chr1 (197-246)||(40717396-40717445)
chr1 (193-246)||(44108597-44108650)
chr1 (198-246)||(50094232-50094280)
chr1 (193-249)||(52125233-52125289)
chr1 (159-246)||(31491870-31491957)
chr1 (193-244)||(48025356-48025407)
chr1 (193-243)||(15573605-15573655)
chr1 (193-246)||(25560972-25561026)
chr1 (193-243)||(39477810-39477860)
chr1 (193-246)||(9915441-9915494)
chr1 (193-246)||(12591182-12591235)
chr1 (193-246)||(16757294-16757347)
chr1 (193-246)||(26352181-26352234)
chr1 (194-246)||(49426515-49426565)
chr1 (193-246)||(49468811-49468864)
chr1 (193-246)||(52024334-52024387)
chr1 (194-246)||(26595169-26595221)
chr1 (195-243)||(46271420-46271468)
chr1 (194-246)||(49402971-49403023)
chr1 (193-243)||(1740744-1740794)
chr1 (196-246)||(10842781-10842831)
chr1 (200-246)||(25487093-25487139)
chr1 (193-243)||(27208987-27209037)
chr1 (193-243)||(46045971-46046021)
chr1 (193-246)||(7191307-7191360)
chr1 (193-246)||(18794642-18794694)
chr1 (193-246)||(24483386-24483439)
chr1 (193-246)||(31798587-31798640)
chr1 (193-246)||(35848033-35848086)
chr1 (193-242)||(38947653-38947702)
chr1 (193-246)||(44557144-44557197)
chr1 (193-237)||(30292938-30292982)
chr1 (206-246)||(34110538-34110578)
chr1 (206-246)||(46286918-46286958)
[»] chr7 (46 HSPs)
chr7 (193-246)||(715963-716016)
chr7 (193-246)||(12977786-12977839)
chr7 (193-244)||(18292333-18292384)
chr7 (159-246)||(37815688-37815775)
chr7 (193-246)||(22297994-22298047)
chr7 (193-246)||(45948730-45948783)
chr7 (158-246)||(34274757-34274845)
chr7 (159-246)||(1741956-1742042)
chr7 (159-246)||(45499927-45500014)
chr7 (193-243)||(24780409-24780459)
chr7 (193-246)||(8603973-8604026)
chr7 (193-246)||(31418613-31418666)
chr7 (193-246)||(37490782-37490835)
chr7 (193-246)||(42285906-42285959)
chr7 (193-246)||(44567141-44567194)
chr7 (159-243)||(4268575-4268659)
chr7 (195-243)||(40927163-40927211)
chr7 (193-237)||(42753706-42753750)
chr7 (193-245)||(48843550-48843602)
chr7 (159-246)||(2297002-2297089)
chr7 (159-242)||(8334376-8334459)
chr7 (197-244)||(18270579-18270626)
chr7 (197-244)||(21752213-21752260)
chr7 (200-246)||(10476141-10476187)
chr7 (200-246)||(25440877-25440923)
chr7 (193-243)||(35777817-35777867)
chr7 (159-237)||(40339423-40339501)
chr7 (193-246)||(13405227-13405280)
chr7 (193-246)||(23935420-23935473)
chr7 (209-246)||(24133230-24133267)
chr7 (193-246)||(24680126-24680179)
chr7 (197-246)||(37502321-37502370)
chr7 (200-245)||(39557327-39557372)
chr7 (193-246)||(41137726-41137779)
chr7 (193-246)||(42880034-42880087)
chr7 (194-246)||(10599212-10599264)
chr7 (198-246)||(48684726-48684774)
chr7 (198-237)||(29636336-29636375)
chr7 (193-243)||(27935765-27935815)
chr7 (200-246)||(27947601-27947647)
chr7 (193-242)||(6747225-6747274)
chr7 (193-246)||(19105101-19105154)
chr7 (201-246)||(29531035-29531080)
chr7 (193-237)||(1031153-1031197)
chr7 (193-237)||(32501858-32501902)
chr7 (201-237)||(44453141-44453177)
[»] chr3 (42 HSPs)
chr3 (193-246)||(47895443-47895496)
chr3 (193-246)||(50646209-50646262)
chr3 (159-246)||(38016340-38016426)
chr3 (159-246)||(32492280-32492364)
chr3 (193-246)||(4758989-4759042)
chr3 (158-246)||(30431084-30431171)
chr3 (198-246)||(36729909-36729957)
chr3 (159-246)||(42571628-42571715)
chr3 (193-246)||(2458005-2458058)
chr3 (193-246)||(3152905-3152958)
chr3 (193-246)||(11019925-11019978)
chr3 (193-246)||(11393543-11393596)
chr3 (193-246)||(19115385-19115438)
chr3 (193-246)||(30426423-30426476)
chr3 (193-246)||(31853661-31853714)
chr3 (193-246)||(35557857-35557910)
chr3 (193-246)||(36844841-36844894)
chr3 (193-246)||(42886749-42886802)
chr3 (193-246)||(44676219-44676272)
chr3 (193-246)||(48901718-48901771)
chr3 (193-246)||(48903284-48903337)
chr3 (159-246)||(31583533-31583620)
chr3 (194-237)||(38140949-38140992)
chr3 (159-246)||(39356849-39356936)
chr3 (159-246)||(51397974-51398061)
chr3 (196-246)||(40487829-40487879)
chr3 (193-246)||(23525415-23525468)
chr3 (193-246)||(30315307-30315360)
chr3 (193-246)||(45213821-45213874)
chr3 (193-246)||(50038270-50038323)
chr3 (194-246)||(36460805-36460857)
chr3 (193-243)||(19373584-19373634)
chr3 (193-246)||(23208390-23208441)
chr3 (193-243)||(33194133-33194183)
chr3 (195-237)||(38363785-38363827)
chr3 (193-246)||(4392194-4392247)
chr3 (193-246)||(22857088-22857141)
chr3 (193-246)||(41850388-41850441)
chr3 (193-246)||(47823550-47823603)
chr3 (201-246)||(52654310-52654355)
chr3 (193-246)||(53200779-53200832)
chr3 (194-246)||(7230995-7231047)
[»] scaffold0110 (1 HSPs)
scaffold0110 (159-246)||(24842-24929)
[»] chr5 (30 HSPs)
chr5 (159-246)||(2729888-2729975)
chr5 (159-246)||(14620596-14620683)
chr5 (159-246)||(21319412-21319499)
chr5 (193-246)||(7317026-7317079)
chr5 (193-246)||(10345034-10345087)
chr5 (193-246)||(24280991-24281044)
chr5 (193-246)||(24381168-24381221)
chr5 (193-246)||(42104165-42104218)
chr5 (200-246)||(3306111-3306157)
chr5 (164-246)||(39566152-39566234)
chr5 (193-246)||(3025033-3025086)
chr5 (193-246)||(13761555-13761608)
chr5 (193-246)||(26660753-26660806)
chr5 (193-246)||(26932346-26932399)
chr5 (194-242)||(38362243-38362291)
chr5 (159-246)||(4911252-4911338)
chr5 (159-246)||(21195343-21195430)
chr5 (200-246)||(27797786-27797832)
chr5 (193-246)||(6518974-6519027)
chr5 (194-243)||(15167115-15167164)
chr5 (200-246)||(4630870-4630916)
chr5 (160-246)||(9066525-9066611)
chr5 (193-246)||(39504720-39504774)
chr5 (196-246)||(39729960-39730010)
chr5 (193-246)||(25362902-25362955)
chr5 (193-246)||(27600397-27600450)
chr5 (197-246)||(35766002-35766051)
chr5 (193-246)||(36073732-36073785)
chr5 (200-243)||(34534365-34534406)
chr5 (215-243)||(34972747-34972775)
[»] scaffold2107 (1 HSPs)
scaffold2107 (200-246)||(615-661)
[»] scaffold0332 (1 HSPs)
scaffold0332 (193-246)||(3912-3965)
[»] scaffold0565 (2 HSPs)
scaffold0565 (159-246)||(9743-9830)
scaffold0565 (193-243)||(10060-10110)
[»] scaffold0182 (1 HSPs)
scaffold0182 (159-246)||(18356-18443)
[»] scaffold0048 (1 HSPs)
scaffold0048 (159-246)||(62597-62684)
[»] scaffold0502 (1 HSPs)
scaffold0502 (200-246)||(673-719)
[»] scaffold0300 (1 HSPs)
scaffold0300 (196-246)||(4566-4616)
[»] scaffold0294 (1 HSPs)
scaffold0294 (196-246)||(3606-3656)
[»] scaffold0983 (1 HSPs)
scaffold0983 (193-246)||(788-841)
[»] scaffold0078 (1 HSPs)
scaffold0078 (193-246)||(1515-1568)
[»] scaffold0015 (1 HSPs)
scaffold0015 (208-246)||(21183-21221)
[»] scaffold0026 (1 HSPs)
scaffold0026 (214-246)||(4160-4192)


Alignment Details
Target: chr4 (Bit Score: 134; Significance: 8e-70; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 49 - 246
Target Start/End: Complemental strand, 52848357 - 52848160
Alignment:
Q  49 aaaatgtatccttctatgttcctcattttgatattttcaagactcgttcattttattgttcttcatgttggatctcaatcttagcaatgataaactttac 148  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||  ||||||||||    
T  52848357 aaaatgtatccttctatgttcctcattttgatattttcaagactcgttcattttattgttcttcatgttggatctgaatcttagtaatagtaaactttac 52848258  T
Q  149 tccctctgatgtttcaaaatgagtgtcgttttagtcnnnnnnnnttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||| ||||| |||||||||||||||||||          |||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  52848257 tccctctgttgttttaaaatgagtgtcgttttagcaaaaaaaaattgttttaaaatgaatgtcactttcaatttccaatgcaataataattttttctt 52848160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 162 - 246
Target Start/End: Original strand, 30261226 - 30261310
Alignment:
Q  162 tcaaaatgagtgtcgttttagtcnnnnnnnnttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||||||||||||||        |||||||||||| ||||||||||||| ||||||||||||||||||| |||||||    
T  30261226 tcaaaatgagtgtcgttttagtcaaaaaaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataatgttttctt 30261310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 158 - 246
Target Start/End: Complemental strand, 52957984 - 52957896
Alignment:
Q  158 tgtttcaaaatgagtgtcgttttagtcnnnnnnnnttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    ||||||||||||||||||||||||| |        |||||||||||| ||||||||||||| |||||||||||||||||| ||||||||    
T  52957984 tgtttcaaaatgagtgtcgttttagccaaaaagaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 52957896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 37624554 - 37624607
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  37624554 ttgtttcaaaataaatgtcactttcagtttccaatgcaataataactttttctt 37624607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 40345506 - 40345453
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  40345506 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataattttttctt 40345453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 246
Target Start/End: Original strand, 1819528 - 1819613
Alignment:
Q  160 tttcaaaatgagtgtcgttttagtcnnnnnnnnttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    ||||||||||||||||||||||| |        |||||||||||| ||||||||||||| |||||||||||||||||| ||||||||    
T  1819528 tttcaaaatgagtgtcgttttag-caaaaaaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataaatttttctt 1819613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 193 - 243
Target Start/End: Complemental strand, 34413706 - 34413656
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataatttttt 243  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  34413706 ttgtttcaaaataaatgtcactttcaatttcaaatgcaataataacttttt 34413656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 2493100 - 2493153
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| || |||||||||| |||||||||||||||||||||||||||    
T  2493100 ttgtttcaaaatgaaagtcactttcattttccaatgcaataataattttttctt 2493153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 4505335 - 4505388
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| ||||||||||||| |||||||||||||||||| ||||||||    
T  4505335 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 4505388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 19451370 - 19451317
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| ||||||||||||| |||||||||||||||||| ||||||||    
T  19451370 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 19451317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 19930712 - 19930765
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| ||||||||||||||||||| |||||||||||| ||||||||    
T  19930712 ttgtttcaaaatgaatgtcactttcaatttccgatgcaataataactttttctt 19930765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 20448037 - 20448090
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| ||||||||||||| ||| |||||||||||||||||||||||    
T  20448037 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataattttttctt 20448090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 22220518 - 22220465
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||||||||||| ||||||||| |||||||||||||| ||||||||    
T  22220518 ttgtttcaaaataaatgtcattttcaattttcaatgcaataataactttttctt 22220465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 25231173 - 25231226
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||| ||||| |||||||||||||||||||||||||||||||| ||||||||    
T  25231173 ttgttttaaaatgaatgtcactttcaatttccaatgcaataataactttttctt 25231226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 51733653 - 51733600
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| ||||||||||||| |||| ||||||||||||||||||||||    
T  51733653 ttgtttcaaaatgaatgtcactttcagtttctaatgcaataataattttttctt 51733600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 158 - 246
Target Start/End: Original strand, 19878612 - 19878699
Alignment:
Q  158 tgtttcaaaatgagtgtcgttttagtcnnnnnnnnttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    ||||||||||||||||||||||||| |        |||||| ||||| ||||||||||||| |||||||||||||||||| ||||||||    
T  19878612 tgtttcaaaatgagtgtcgttttag-caaaaaaaattgtttgaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 19878699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 200 - 243
Target Start/End: Original strand, 34316227 - 34316270
Alignment:
Q  200 aaaataaatgtcactttcaatttccaatgcaataataatttttt 243  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  34316227 aaaataaatgtcactttcagtttccaatgcaataataatttttt 34316270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 246
Target Start/End: Original strand, 52253809 - 52253896
Alignment:
Q  159 gtttcaaaatgagtgtcgttttagtcnnnnnnnnttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| ||||||||||| |        |||||||||||| ||||||||||||| |||||||||||||||||| || |||||    
T  52253809 gtttcaaaatgaatgtcgttttagccaaaaaaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataacttcttctt 52253896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 193 - 243
Target Start/End: Complemental strand, 29519684 - 29519634
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataatttttt 243  Q
    |||||||||||||||||||||||| | |||||||||||||||||| |||||    
T  29519684 ttgtttcaaaataaatgtcacttttagtttccaatgcaataataacttttt 29519634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 193 - 243
Target Start/End: Original strand, 40837128 - 40837178
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataatttttt 243  Q
    |||||||||||| ||||||||||||| |||||||||||||||||| |||||    
T  40837128 ttgtttcaaaatgaatgtcactttcattttccaatgcaataataacttttt 40837178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 24157183 - 24157236
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||||||||||| ||| | |||| ||||||||||||||||||||||    
T  24157183 ttgtttcaaaataaatgtcaattttagtttctaatgcaataataattttttctt 24157236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 24940877 - 24940930
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| ||||||| |||| ||||||||||||||||||| ||||||||    
T  24940877 ttgtttcaaaatgaatgtcattttcgatttccaatgcaataataactttttctt 24940930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 45043747 - 45043694
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||| ||||| ||||||||||||| ||| |||||||||||||||||||||||    
T  45043747 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataattttttctt 45043694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 52915701 - 52915648
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| |||||| |||||| |||||||||||||||||| ||||||||    
T  52915701 ttgtttcaaaatgaatgtcgctttcagtttccaatgcaataataactttttctt 52915648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 193 - 237
Target Start/End: Complemental strand, 27943705 - 27943661
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataa 237  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||    
T  27943705 ttgtttcaaaatgaatgtcactttcaattttcaatgcaataataa 27943661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 198 - 246
Target Start/End: Original strand, 39982106 - 39982154
Alignment:
Q  198 tcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    ||||||| ||||||||||||| |||||||||||||||||| ||||||||    
T  39982106 tcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 39982154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 197 - 246
Target Start/End: Complemental strand, 2728553 - 2728504
Alignment:
Q  197 ttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||| ||||||| ||||| |||||||||||||||||| ||||||||    
T  2728553 ttcaaaatgaatgtcattttcagtttccaatgcaataataactttttctt 2728504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 10573313 - 10573260
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| ||||||| ||| | |||||||||||||||||| ||||||||    
T  10573313 ttgtttcaaaatgaatgtcatttttagtttccaatgcaataataactttttctt 10573260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 197 - 246
Target Start/End: Complemental strand, 27886098 - 27886049
Alignment:
Q  197 ttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||||||| ||| |||||| |||||||||||||| |||||||    
T  27886098 ttcaaaataaatgtcatttttaatttcaaatgcaataataatattttctt 27886049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 41496203 - 41496256
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||||||| ||||||||| ||| |||| ||||||||| ||||||||    
T  41496203 ttgtttcaaaataaatctcactttcagttttcaatacaataataactttttctt 41496256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 41920468 - 41920415
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||| ||||||||||||| ||||| ||||||| |||||||||| ||||||||    
T  41920468 ttgttttaaaataaatgtcattttcagtttccaaagcaataataactttttctt 41920415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 54042342 - 54042289
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||| ||||| ||||||||||||  ||||||||| |||||||||||||||||    
T  54042342 ttgttttaaaatgaatgtcactttcggtttccaatgtaataataattttttctt 54042289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 198 - 246
Target Start/End: Complemental strand, 50621341 - 50621293
Alignment:
Q  198 tcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    ||||||||||||||||||| | ||| |||||||||||||| ||||||||    
T  50621341 tcaaaataaatgtcactttaagttttcaatgcaataataactttttctt 50621293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 243
Target Start/End: Original strand, 52162111 - 52162154
Alignment:
Q  200 aaaataaatgtcactttcaatttccaatgcaataataatttttt 243  Q
    ||||| ||||||||||||||||| ||| ||||||||||||||||    
T  52162111 aaaatgaatgtcactttcaattttcaacgcaataataatttttt 52162154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 246
Target Start/End: Complemental strand, 6991413 - 6991367
Alignment:
Q  200 aaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    ||||| ||||||||||||| ||| |||| ||||||||||||||||||    
T  6991413 aaaatgaatgtcactttcagttttcaatacaataataattttttctt 6991367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 246
Target Start/End: Complemental strand, 7906152 - 7906102
Alignment:
Q  196 tttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    ||||||||| ||||||||||||| |||||  ||||||||||| ||||||||    
T  7906152 tttcaaaatgaatgtcactttcagtttccggtgcaataataactttttctt 7906102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 246
Target Start/End: Complemental strand, 21864535 - 21864489
Alignment:
Q  200 aaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    ||||| ||||| ||||||| |||||||||||||||||| ||||||||    
T  21864535 aaaatgaatgttactttcagtttccaatgcaataataactttttctt 21864489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 246
Target Start/End: Complemental strand, 21920396 - 21920350
Alignment:
Q  200 aaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    ||||| ||||| ||||||| |||||||||||||||||| ||||||||    
T  21920396 aaaatgaatgttactttcagtttccaatgcaataataactttttctt 21920350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 243
Target Start/End: Original strand, 49089462 - 49089512
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataatttttt 243  Q
    |||||||||||| ||||||||||| | ||| |||||||||||||| |||||    
T  49089462 ttgtttcaaaatgaatgtcacttttagttttcaatgcaataataacttttt 49089512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 31917954 - 31918007
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||| ||||| ||| |||||||||  |||||||||||||||| |||||||||    
T  31917954 ttgttttaaaatgaatttcactttcagcttccaatgcaataatagttttttctt 31918007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 44572024 - 44571971
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||| ||||| |||||| |||||| ||||||||||||||| || ||||||||    
T  44572024 ttgttttaaaatgaatgtcgctttcagtttccaatgcaataaaaactttttctt 44571971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 47817736 - 47817789
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| ||| | ||||||| ||| |||||||||||||| ||||||||    
T  47817736 ttgtttcaaaatgaatttaactttcagtttgcaatgcaataataactttttctt 47817789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 237
Target Start/End: Original strand, 28734596 - 28734640
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataa 237  Q
    |||||||| ||| ||||||||||||| |||||| |||||||||||    
T  28734596 ttgtttcataatgaatgtcactttcagtttccattgcaataataa 28734640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 237
Target Start/End: Original strand, 33033076 - 33033120
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataa 237  Q
    |||||| ||||| ||||||||||| | ||||||||||||||||||    
T  33033076 ttgttttaaaatgaatgtcacttttagtttccaatgcaataataa 33033120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 1e-19; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 34546486 - 34546433
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  34546486 ttgtttcaaaatgaatgtcactttcaatttccaatgcaataataattttttctt 34546433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 16807672 - 16807619
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  16807672 ttgtttcaaaataaatgtcactttaagtttccaatgcaataataattttttctt 16807619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 16846953 - 16846900
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  16846953 ttgtttcaaaataaatgtcactttaagtttccaatgcaataataattttttctt 16846900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 159 - 246
Target Start/End: Original strand, 4132988 - 4133075
Alignment:
Q  159 gtttcaaaatgagtgtcgttttagtcnnnnnnnnttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||||||||||||||| |        |||||||||||| ||||||||||||  |||||||||||||||||| ||||||||    
T  4132988 gtttcaaaatgagtgtcgttttagccaaaaaaaattgtttcaaaatgaatgtcactttcggtttccaatgcaataataactttttctt 4133075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 193 - 243
Target Start/End: Complemental strand, 4051859 - 4051809
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataatttttt 243  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  4051859 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataatttttt 4051809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 193 - 243
Target Start/End: Complemental strand, 12566135 - 12566085
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataatttttt 243  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  12566135 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataatttttt 12566085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 246
Target Start/End: Complemental strand, 29396868 - 29396782
Alignment:
Q  160 tttcaaaatgagtgtcgttttagtcnnnnnnnnttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    ||||||||||||||||| |||||||        |||||||||||| ||||||||||||  |||||||||||||||||| ||||||||    
T  29396868 tttcaaaatgagtgtcgctttagtcaaaaaaaattgtttcaaaatgaatgtcactttcggtttccaatgcaataataactttttctt 29396782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 193 - 243
Target Start/End: Original strand, 35799201 - 35799251
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataatttttt 243  Q
    |||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  35799201 ttgtttcaaaataaatgtcactttcagtttccaatgcaataataacttttt 35799251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 246
Target Start/End: Complemental strand, 43427475 - 43427389
Alignment:
Q  160 tttcaaaatgagtgtcgttttagtcnnnnnnnnttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    ||||||||||||||||| ||||| |        |||||||||||| ||||||||||||| |||||||||||||||||| ||||||||    
T  43427475 tttcaaaatgagtgtcgctttagacaaaaaaatttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 43427389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 13561992 - 13562045
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||||||||||||||||| |||| ||||||||||||| ||||||||    
T  13561992 ttgtttcaaaataaatgtcactttcagtttctaatgcaataataactttttctt 13562045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 18579165 - 18579218
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| ||||||||||||| ||| |||||||||||||||||||||||    
T  18579165 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataattttttctt 18579218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 43971502 - 43971555
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| ||||||||||||| |||||||||||||||||| ||||||||    
T  43971502 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 43971555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 246
Target Start/End: Original strand, 12342057 - 12342144
Alignment:
Q  159 gtttcaaaatgagtgtcgttttagtcnnnnnnnnttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||||||||||||||  |        |||||||||||| ||||||||||||  |||||||||||||||||| ||||||||    
T  12342057 gtttcaaaatgagtgtcgttttaaccaaaaaaaattgtttcaaaatgaatgtcactttcggtttccaatgcaataataactttttctt 12342144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 246
Target Start/End: Complemental strand, 45082089 - 45082002
Alignment:
Q  159 gtttcaaaatgagtgtcgttttagtcnnnnnnnnttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||| ||||||||||||||| |        || ||||| ||| ||||||||||||| |||||||||||||||||||||||||||    
T  45082089 gtttcaaattgagtgtcgttttagccaaaaaaaattatttcacaatgaatgtcactttcagtttccaatgcaataataattttttctt 45082002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 16792481 - 16792534
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| ||||||||||| | |||||||||||||||||| ||||||||    
T  16792481 ttgtttcaaaatgaatgtcactttgagtttccaatgcaataataactttttctt 16792534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 17703017 - 17703070
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||| ||||| ||||||||||||||||| |||||||||||||| ||||||||    
T  17703017 ttgttttaaaatgaatgtcactttcaattttcaatgcaataataactttttctt 17703070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 45301763 - 45301816
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||| ||||| ||||||||||||| |||||||||||||||||| ||||||||    
T  45301763 ttgttttaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 45301816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 194 - 246
Target Start/End: Original strand, 5717512 - 5717564
Alignment:
Q  194 tgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    ||||| ||||| ||||||||||||| |||||||||||||||||| ||||||||    
T  5717512 tgttttaaaatgaatgtcactttcagtttccaatgcaataataaatttttctt 5717564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 243
Target Start/End: Complemental strand, 12394110 - 12394026
Alignment:
Q  159 gtttcaaaatgagtgtcgttttagtcnnnnnnnnttgtttcaaaataaatgtcactttcaatttccaatgcaataataatttttt 243  Q
    |||||||||||||||||||||||| |        |||||||||||| ||||| ||||||| |||| ||||||||||||| |||||    
T  12394110 gtttcaaaatgagtgtcgttttaggcaaaaaaaattgtttcaaaatgaatgttactttcagtttctaatgcaataataacttttt 12394026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 243
Target Start/End: Original strand, 36177940 - 36178024
Alignment:
Q  159 gtttcaaaatgagtgtcgttttagtcnnnnnnnnttgtttcaaaataaatgtcactttcaatttccaatgcaataataatttttt 243  Q
    ||||||||||||||||||||||||          |||||||||||| ||||||||||||  |||||||||||||||||| |||||    
T  36177940 gtttcaaaatgagtgtcgttttagcaaaaaaaaattgtttcaaaatgaatgtcactttccgtttccaatgcaataataacttttt 36178024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 195 - 242
Target Start/End: Original strand, 30855105 - 30855152
Alignment:
Q  195 gtttcaaaataaatgtcactttcaatttccaatgcaataataattttt 242  Q
    |||||||||| ||||||||| ||| |||||||||||||||||||||||    
T  30855105 gtttcaaaatgaatgtcactctcagtttccaatgcaataataattttt 30855152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 200 - 246
Target Start/End: Complemental strand, 16463180 - 16463134
Alignment:
Q  200 aaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    ||||||||||||||||||| ||| |||||||||||||| ||||||||    
T  16463180 aaaataaatgtcactttcagttttcaatgcaataataactttttctt 16463134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 441386 - 441333
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| ||||||||||||  ||| |||||||||||||| ||||||||    
T  441386 ttgtttcaaaatgaatgtcactttctgttttcaatgcaataataactttttctt 441333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 4288866 - 4288813
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| ||| |||||| || |||| ||||||||||||||||||||||    
T  4288866 ttgtttcaaaatgaatatcacttacagtttctaatgcaataataattttttctt 4288813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 6220559 - 6220506
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||| ||||| ||||||||||| | |||||||||||||||||| ||||||||    
T  6220559 ttgttttaaaatgaatgtcacttttagtttccaatgcaataataactttttctt 6220506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 7028967 - 7028914
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| ||||||| ||||| |||||||||||||||| | ||||||||    
T  7028967 ttgtttcaaaatgaatgtcattttcactttccaatgcaataatgactttttctt 7028914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 13788497 - 13788550
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    ||||| |||||||||||||| |||||||||| ||||||||| ||||| ||||||    
T  13788497 ttgttccaaaataaatgtcattttcaatttctaatgcaatattaattatttctt 13788550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 14833890 - 14833837
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||| ||||| ||||||||||||||||| |||||||| ||||| ||||||||    
T  14833890 ttgttttaaaatgaatgtcactttcaattttcaatgcaacaataactttttctt 14833837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 22620489 - 22620436
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| | |||| |||||| |||||||||||||||||| ||||||||    
T  22620489 ttgtttcaaaatgagtgtcgctttcagtttccaatgcaataataactttttctt 22620436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 242
Target Start/End: Original strand, 35046516 - 35046565
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttt 242  Q
    |||||| || || |||||||||||||||||||||||||||||||| ||||    
T  35046516 ttgttttaagatgaatgtcactttcaatttccaatgcaataataactttt 35046565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 36685895 - 36685842
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||| ||||| ||||| |||||||||||| ||| ||||||||||||||||||    
T  36685895 ttgttttaaaatgaatgttactttcaatttcaaatacaataataattttttctt 36685842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 246
Target Start/End: Complemental strand, 27964524 - 27964472
Alignment:
Q  194 tgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||| |||| ||||||||||| | |||||||||||||||||| ||||||||    
T  27964524 tgtttcgaaatgaatgtcacttttagtttccaatgcaataataactttttctt 27964472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 243
Target Start/End: Original strand, 42004896 - 42004939
Alignment:
Q  200 aaaataaatgtcactttcaatttccaatgcaataataatttttt 243  Q
    ||||| ||||||| ||| ||||||||||||||||||||||||||    
T  42004896 aaaatgaatgtcatttttaatttccaatgcaataataatttttt 42004939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 246
Target Start/End: Complemental strand, 9391710 - 9391660
Alignment:
Q  196 tttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    ||||||||| ||||||| ||||| |||  ||||||||||||||||||||||    
T  9391710 tttcaaaatgaatgtcattttcagtttttaatgcaataataattttttctt 9391660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 4658388 - 4658335
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| ||||||  ||||| ||| ||||| |||||||||||||||||    
T  4658388 ttgtttcaaaatgaatgtctttttcatttttcaatgtaataataattttttctt 4658335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 7042341 - 7042288
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| ||||||| ||||| || ||||||||||||| | ||||||||    
T  7042341 ttgtttcaaaatgaatgtcattttcacttcccaatgcaataatgactttttctt 7042288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 17695980 - 17695927
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| | ||||||||||| |||||||||  ||||||| ||||||||    
T  17695980 ttgtttcaaaatgagtgtcactttcagtttccaatgtgataataactttttctt 17695927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 246
Target Start/End: Complemental strand, 18719579 - 18719534
Alignment:
Q  201 aaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||| ||||||||||||| ||| |||||||||||||| ||||||||    
T  18719579 aaatgaatgtcactttcagttttcaatgcaataataactttttctt 18719534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 25383639 - 25383586
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||| ||||| ||||| | ||||| |||||||||||||||||| ||||||||    
T  25383639 ttgttttaaaatgaatgttattttcagtttccaatgcaataataactttttctt 25383586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 29808810 - 29808863
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||| ||||| ||||||||||||| ||| ||||||||| |||| ||||||||    
T  29808810 ttgttttaaaatgaatgtcactttcagttttcaatgcaatcataactttttctt 29808863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 242
Target Start/End: Original strand, 32254591 - 32254639
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttt 242  Q
    |||||||||||| || |||||||||| ||||||||| |||||||||||||    
T  32254591 ttgtttcaaaatgaa-gtcactttcagtttccaatgaaataataattttt 32254639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 237
Target Start/End: Original strand, 777768 - 777812
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataa 237  Q
    |||||| ||||| ||||||| |||||||||| |||||||||||||    
T  777768 ttgttttaaaatgaatgtcattttcaatttctaatgcaataataa 777812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 241
Target Start/End: Complemental strand, 9366274 - 9366226
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataatttt 241  Q
    |||||| ||||||||||||||||| | ||| ||||| ||||||||||||    
T  9366274 ttgttttaaaataaatgtcactttaagttttcaatgaaataataatttt 9366226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 237
Target Start/End: Original strand, 38926604 - 38926648
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataa 237  Q
    |||||| ||||| ||||||||||||| ||| ||||||||||||||    
T  38926604 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataa 38926648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 2e-18; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 159 - 246
Target Start/End: Original strand, 39463223 - 39463310
Alignment:
Q  159 gtttcaaaatgagtgtcgttttagtcnnnnnnnnttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||||||||||||||| |        |||||||||||| ||||||||||||| |||||||||||||||||| ||||||||    
T  39463223 gtttcaaaatgagtgtcgttttagccaaaaaaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 39463310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 159 - 246
Target Start/End: Complemental strand, 15160635 - 15160548
Alignment:
Q  159 gtttcaaaatgagtgtcgttttagtcnnnnnnnnttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||||||||| ||||| |        |||||||||||| ||||||||||||| |||||||||||||||||| ||||||||    
T  15160635 gtttcaaaatgagtgtcgctttagccaaaaaaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 15160548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 159 - 246
Target Start/End: Complemental strand, 39698854 - 39698768
Alignment:
Q  159 gtttcaaaatgagtgtcgttttagtcnnnnnnnnttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||||||||||||||| |        |||||||||||| ||||||||||||| |||||||||||||||||| ||||||||    
T  39698854 gtttcaaaatgagtgtcgttttag-ccaaaaaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 39698768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 7839456 - 7839509
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| ||||||||||||||||||||||||||||||||  |||||||    
T  7839456 ttgtttcaaaatgaatgtcactttcaatttccaatgcaataataaccttttctt 7839509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 158 - 246
Target Start/End: Complemental strand, 39766049 - 39765961
Alignment:
Q  158 tgtttcaaaatgagtgtcgttttagtcnnnnnnnnttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    ||||||||||||||||||| ||||| |        |||||||||||| ||||||||||||| ||| |||||||||||||| ||||||||    
T  39766049 tgtttcaaaatgagtgtcgctttagccaaaaaaaattgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 39765961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 43724379 - 43724434
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttcttct 248  Q
    |||||||||||| ||| ||||||||| |||||||||||||||||||||||| ||||    
T  43724379 ttgtttcaaaatgaatttcactttcagtttccaatgcaataataatttttttttct 43724434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 200 - 246
Target Start/End: Original strand, 514879 - 514925
Alignment:
Q  200 aaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||    
T  514879 aaaatgaatgtcactttcaattttcaatgcaataataattttttctt 514925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 246
Target Start/End: Complemental strand, 9880689 - 9880603
Alignment:
Q  159 gtttcaaaatgagtgtcgttttagtcnnnnnnnnttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||| |||||||||||||||||||||        |||||||||||| |||||||||  || |||||||||||||||||||||||||||    
T  9880689 gttttaaaatgagtgtcgttttagtcaaaaaaa-ttgtttcaaaatgaatgtcactcacagtttccaatgcaataataattttttctt 9880603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 4760713 - 4760660
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||| ||||| ||||||||||||| |||||||||||| ||||||||||||||    
T  4760713 ttgttttaaaatgaatgtcactttcattttccaatgcaacaataattttttctt 4760660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 4989476 - 4989529
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| ||| ||||||||| |||||||||||||||||| ||||||||    
T  4989476 ttgtttcaaaatgaatatcactttcagtttccaatgcaataataactttttctt 4989529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 6374412 - 6374465
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| ||||||||||||| ||| |||||||||||||| ||||||||    
T  6374412 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 6374465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 9304788 - 9304735
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| ||||| ||||| | |||||||||||||||||||||||||||    
T  9304788 ttgtttcaaaatgaatgtgacttttagtttccaatgcaataataattttttctt 9304735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 40228572 - 40228625
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| ||||||||||||| ||| |||||||||||||| ||||||||    
T  40228572 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 40228625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 45359049 - 45358996
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| | ||||| ||||||||| |||||||||||||||||||||||    
T  45359049 ttgtttcaaaatgactgtcattttcaattttcaatgcaataataattttttctt 45358996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 200 - 246
Target Start/End: Original strand, 36921362 - 36921408
Alignment:
Q  200 aaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    ||||| || |||||||||||||| |||||||||||||||||||||||    
T  36921362 aaaatgaacgtcactttcaattttcaatgcaataataattttttctt 36921408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 193 - 243
Target Start/End: Original strand, 43448714 - 43448764
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataatttttt 243  Q
    |||||||||||| ||| ||||||||| |||||||||||||||||| |||||    
T  43448714 ttgtttcaaaatgaatatcactttcagtttccaatgcaataataacttttt 43448764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 196 - 246
Target Start/End: Complemental strand, 43974943 - 43974893
Alignment:
Q  196 tttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    ||||||||| ||||||||||| | |||||||||||||||||| ||||||||    
T  43974943 tttcaaaatgaatgtcacttttagtttccaatgcaataataactttttctt 43974893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 15227565 - 15227618
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| |||||||||||||| || |||||||||||||| | ||||||    
T  15227565 ttgtttcaaaatgaatgtcactttcaaatttcaatgcaataataaatgtttctt 15227618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 17920954 - 17921007
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||| ||||| ||||||||||||| ||| |||||||||||||| ||||||||    
T  17920954 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 17921007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 19438234 - 19438287
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    ||||||| |||||||||||||| ||| ||||||||| |||||||| ||||||||    
T  19438234 ttgtttcgaaataaatgtcactctcagtttccaatgtaataataactttttctt 19438287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 29025901 - 29025848
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||  ||||||||||| | |||||||||||||||||| ||||||||    
T  29025901 ttgtttcaaaacgaatgtcactttaagtttccaatgcaataataactttttctt 29025848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 37559688 - 37559635
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||| ||||| ||||||||||||| |||||||| ||||||||| ||||||||    
T  37559688 ttgttttaaaatcaatgtcactttcagtttccaatacaataataactttttctt 37559635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 40362433 - 40362486
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||| ||||| ||||||||||||| ||| |||||||||||||| ||||||||    
T  40362433 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 40362486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 198 - 246
Target Start/End: Complemental strand, 5295556 - 5295508
Alignment:
Q  198 tcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    ||||||| ||||||||||| | |||| ||||||||||||||||||||||    
T  5295556 tcaaaatgaatgtcactttaagtttctaatgcaataataattttttctt 5295508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 210 - 246
Target Start/End: Complemental strand, 31899386 - 31899350
Alignment:
Q  210 tcactttcaatttccaatgcaataataattttttctt 246  Q
    ||||||||| |||||||||||||||||||||||||||    
T  31899386 tcactttcagtttccaatgcaataataattttttctt 31899350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 243
Target Start/End: Original strand, 9812171 - 9812221
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataatttttt 243  Q
    |||||| ||||| ||||||||||||| |||| ||||||||||||| |||||    
T  9812171 ttgttttaaaatgaatgtcactttcagtttctaatgcaataataacttttt 9812221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 243
Target Start/End: Complemental strand, 14234373 - 14234323
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataatttttt 243  Q
    |||||| ||||| ||||||||||| |||||| |||||||||||||| ||||    
T  14234373 ttgttttaaaatgaatgtcacttttaatttctaatgcaataataatatttt 14234323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 246
Target Start/End: Original strand, 35356308 - 35356358
Alignment:
Q  196 tttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    ||||||||| ||| ||| ||||| |||||||||||||||||| ||||||||    
T  35356308 tttcaaaatgaatatcattttcagtttccaatgcaataataactttttctt 35356358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 246
Target Start/End: Complemental strand, 43084775 - 43084729
Alignment:
Q  200 aaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    ||||| ||||||||||||| ||| |||||||||||||| ||||||||    
T  43084775 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 43084729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 243
Target Start/End: Original strand, 44713532 - 44713582
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataatttttt 243  Q
    |||||| ||||| ||| ||||||||| |||||||||||||||||| |||||    
T  44713532 ttgttttaaaatgaatatcactttcattttccaatgcaataataacttttt 44713582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 31693776 - 31693723
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||| ||||| ||| ||||||||| ||| |||||||||||||| ||||||||    
T  31693776 ttgttttaaaatgaatatcactttcagttttcaatgcaataataactttttctt 31693723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 34796833 - 34796780
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| |||||  |||| | |||| ||||||||||||||||||||||    
T  34796833 ttgtttcaaaatgaatgttccttttagtttctaatgcaataataattttttctt 34796780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 245
Target Start/End: Complemental strand, 2803392 - 2803340
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttct 245  Q
    ||||||||||||||||||||||||  |||| |||| ||||  |||||||||||    
T  2803392 ttgtttcaaaataaatgtcactttacattttcaatacaattttaattttttct 2803340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 2e-18; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 159 - 246
Target Start/End: Original strand, 29399910 - 29399997
Alignment:
Q  159 gtttcaaaatgagtgtcgttttagtcnnnnnnnnttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    ||||||||||||||||||||||||          |||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  29399910 gtttcaaaatgagtgtcgttttagcaacaaaaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataattttttctt 29399997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 4850650 - 4850597
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  4850650 ttgtttcaaaatgaatgtcactttcaatttccaatgcaataataactttttctt 4850597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 193 - 237
Target Start/End: Complemental strand, 10540663 - 10540619
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataa 237  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  10540663 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataa 10540619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 10520794 - 10520741
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||| ||||||||||||||||||||||| |||| ||||||||||||||||||    
T  10520794 ttgttttaaaataaatgtcactttcaattttcaatacaataataattttttctt 10520741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 24163869 - 24163816
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||| ||||| ||||||||||||| |||||||||||||||||||||||||||    
T  24163869 ttgttttaaaatgaatgtcactttcagtttccaatgcaataataattttttctt 24163816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 158 - 246
Target Start/End: Original strand, 233997 - 234085
Alignment:
Q  158 tgtttcaaaatgagtgtcgttttagtcnnnnnnnnttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||||||||||||||||          |||||||||||| ||||||||||| | |||||||||||||||||| ||||||||    
T  233997 tgtttcaaaatgagtgtcgttttagctaaaaaaaattgtttcaaaatgaatgtcacttttagtttccaatgcaataataactttttctt 234085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 246
Target Start/End: Original strand, 32193666 - 32193753
Alignment:
Q  159 gtttcaaaatgagtgtcgttttagtcnnnnnnnnttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||| ||||||||||||||||||| |        |||||| ||||||||||||||||| | |||| ||||||||||||||||||||||    
T  32193666 gttttaaaatgagtgtcgttttagccaaaataatttgttttaaaataaatgtcacttttagtttctaatgcaataataattttttctt 32193753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 3988896 - 3988845
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    ||||||||||||||||  |||||||| |||||||||||||||||||||||||||    
T  3988896 ttgtttcaaaataaat--cactttcagtttccaatgcaataataattttttctt 3988845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 193 - 243
Target Start/End: Complemental strand, 12063665 - 12063615
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataatttttt 243  Q
    ||||||| |||| ||||||||||||| ||||||||||||||||||||||||    
T  12063665 ttgtttccaaatgaatgtcactttcagtttccaatgcaataataatttttt 12063615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 194 - 243
Target Start/End: Complemental strand, 13504002 - 13503953
Alignment:
Q  194 tgtttcaaaataaatgtcactttcaatttccaatgcaataataatttttt 243  Q
    ||||||||||| ||||||||||||| |||||||||||||||||| |||||    
T  13504002 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataacttttt 13503953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 32429282 - 32429335
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||  ||||||||||| |||||||||||||||||||| ||||||||    
T  32429282 ttgtttcaaaacgaatgtcacttttaatttccaatgcaataataactttttctt 32429335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 197 - 242
Target Start/End: Complemental strand, 12323035 - 12322990
Alignment:
Q  197 ttcaaaataaatgtcactttcaatttccaatgcaataataattttt 242  Q
    |||||||| ||||||||||||| ||||||||||||||||| |||||    
T  12323035 ttcaaaatgaatgtcactttcagtttccaatgcaataatatttttt 12322990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 18737245 - 18737192
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||| ||||| ||||||||||||| |||||||||||||||||| | ||||||    
T  18737245 ttgttttaaaatgaatgtcactttcagtttccaatgcaataataactctttctt 18737192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 197 - 246
Target Start/End: Original strand, 19674982 - 19675031
Alignment:
Q  197 ttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||| ||||||| ||||| |||||||||||||||||| ||||||||    
T  19674982 ttcaaaatgaatgtcattttcagtttccaatgcaataataactttttctt 19675031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 246
Target Start/End: Original strand, 8030643 - 8030693
Alignment:
Q  196 tttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    ||||||||| ||||| ||||||| ||| ||||| |||||||||||||||||    
T  8030643 tttcaaaatgaatgttactttcagttttcaatgtaataataattttttctt 8030693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 243
Target Start/End: Complemental strand, 17552400 - 17552350
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataatttttt 243  Q
    ||||||| |||| ||||||| ||||| ||||||||||||||||| ||||||    
T  17552400 ttgtttcgaaatgaatgtcattttcagtttccaatgcaataatattttttt 17552350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 246
Target Start/End: Complemental strand, 24556076 - 24556030
Alignment:
Q  200 aaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    ||||||||||||| ||||| ||| ||||| |||||||||||||||||    
T  24556076 aaaataaatgtcattttcagttttcaatgtaataataattttttctt 24556030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 242
Target Start/End: Complemental strand, 23259480 - 23259431
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttt 242  Q
    |||||||||||| ||||||| ||||| |||||||||||| ||||| ||||    
T  23259480 ttgtttcaaaatgaatgtcattttcagtttccaatgcaaaaataactttt 23259431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 197 - 246
Target Start/End: Complemental strand, 29713557 - 29713508
Alignment:
Q  197 ttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||| ||||||| ||||  |||||||||||||||||| ||||||||    
T  29713557 ttcaaaatgaatgtcattttccgtttccaatgcaataataactttttctt 29713508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 31233780 - 31233727
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||| ||||| ||||||||||||| ||| || |||||||||||| |||||||    
T  31233780 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttctt 31233727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 246
Target Start/End: Complemental strand, 1502893 - 1502841
Alignment:
Q  194 tgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    ||||| ||||| ||||||| ||||| |||||||||||||| ||||| ||||||    
T  1502893 tgttttaaaattaatgtcattttcagtttccaatgcaatagtaattatttctt 1502841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 2e-18; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 159 - 246
Target Start/End: Complemental strand, 32807125 - 32807038
Alignment:
Q  159 gtttcaaaatgagtgtcgttttagtcnnnnnnnnttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||||||||||||||| |        |||||||||||| ||||||||||||| |||||||||||||||||| ||||||||    
T  32807125 gtttcaaaatgagtgtcgttttagcctaaaaaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 32807038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 34032233 - 34032180
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  34032233 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataattttttctt 34032180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 246
Target Start/End: Complemental strand, 38531483 - 38531397
Alignment:
Q  159 gtttcaaaatgagtgtcgttttagtcnnnnnnnnttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    ||||||||||||| ||||||||||||        |||||||||||| ||||||| ||||| |||||||||||||||||||||||||||    
T  38531483 gtttcaaaatgagcgtcgttttagtcaaaaaaa-ttgtttcaaaatgaatgtcattttcagtttccaatgcaataataattttttctt 38531397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 29567894 - 29567947
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| ||||||||||||| |||||||||||||||||| ||||||||    
T  29567894 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 29567947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 44258660 - 44258607
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||| ||||| ||||||||||||| |||||||||||||||||||||||||||    
T  44258660 ttgttttaaaatgaatgtcactttcagtttccaatgcaataataattttttctt 44258607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 50249308 - 50249361
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| ||||||||||||| |||||||||||||||||| ||||||||    
T  50249308 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 50249361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 246
Target Start/End: Original strand, 15822998 - 15823085
Alignment:
Q  159 gtttcaaaatgagtgtcgttttagtcnnnnnnnnttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||| |||||||| ||||||||||||        |||||| ||||| ||||||||||||| |||||||||||||||||| ||||||||    
T  15822998 gttttaaaatgagagtcgttttagtcaaaagaatttgttttaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 15823085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 200 - 243
Target Start/End: Original strand, 24884420 - 24884463
Alignment:
Q  200 aaaataaatgtcactttcaatttccaatgcaataataatttttt 243  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  24884420 aaaataaatgtcactttcaatttccaatgcaataataacttttt 24884463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 246
Target Start/End: Original strand, 26755184 - 26755271
Alignment:
Q  159 gtttcaaaatgagtgtcgttttagtcnnnnnnnnttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||||||||||||||| |        |||||||||||| ||||||||||||| |||||||| || |||||| ||||||||    
T  26755184 gtttcaaaatgagtgtcgttttagccaaaaaaaattgtttcaaaatgaatgtcactttcagtttccaatacattaataactttttctt 26755271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 5463573 - 5463626
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| ||||||||||||| ||||||||||||| |||| ||||||||    
T  5463573 ttgtttcaaaatgaatgtcactttcagtttccaatgcaattataactttttctt 5463626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 201 - 246
Target Start/End: Complemental strand, 14593465 - 14593420
Alignment:
Q  201 aaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||    
T  14593465 aaatgaatgtcactttcagtttccaatgcaataataattttttctt 14593420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 34047388 - 34047335
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| ||||||||||| | |||||||||||||||||| ||||||||    
T  34047388 ttgtttcaaaatgaatgtcactttgagtttccaatgcaataataactttttctt 34047335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 197 - 246
Target Start/End: Complemental strand, 40717445 - 40717396
Alignment:
Q  197 ttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||| ||||||||||||| ||| |||||||||||||||||||||||    
T  40717445 ttcaaaatgaatgtcactttcagttttcaatgcaataataattttttctt 40717396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 44108597 - 44108650
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||| ||||||||||||||||||| |||||||| ||||||||| ||||||||    
T  44108597 ttgttttaaaataaatgtcactttcagtttccaatacaataataactttttctt 44108650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 198 - 246
Target Start/End: Original strand, 50094232 - 50094280
Alignment:
Q  198 tcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    ||||||| ||||||||||||| |||||||||||||||||| ||||||||    
T  50094232 tcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 50094280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 193 - 249
Target Start/End: Complemental strand, 52125289 - 52125233
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttcttctc 249  Q
    ||||||| |||| ||||||| ||||| |||||||||||||||||||||||| |||||    
T  52125289 ttgtttcgaaatgaatgtcaatttcagtttccaatgcaataataattttttattctc 52125233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 246
Target Start/End: Complemental strand, 31491957 - 31491870
Alignment:
Q  159 gtttcaaaatgagtgtcgttttagtcnnnnnnnnttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||| ||||||||||||| |        |||||||||||| ||||||||||||||||| |||||  ||||||| ||||||||    
T  31491957 gtttcaaaatcagtgtcgttttagccaaaaaaaattgtttcaaaatgaatgtcactttcaattttcaatgtcataataactttttctt 31491870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 193 - 244
Target Start/End: Complemental strand, 48025407 - 48025356
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttc 244  Q
    |||||||||||| ||||||||||||  |||||||||||||||||| ||||||    
T  48025407 ttgtttcaaaatgaatgtcactttcggtttccaatgcaataataactttttc 48025356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 193 - 243
Target Start/End: Original strand, 15573605 - 15573655
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataatttttt 243  Q
    |||||||||||| ||||||||||||| ||| |||||||||||||| |||||    
T  15573605 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataacttttt 15573655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 25561026 - 25560972
Alignment:
Q  193 ttgtttcaaaataaatgtcacttt-caatttccaatgcaataataattttttctt 246  Q
    |||||||||||||||| | ||||| || |||||||||||||||||||||||||||    
T  25561026 ttgtttcaaaataaatattacttttcagtttccaatgcaataataattttttctt 25560972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 193 - 243
Target Start/End: Complemental strand, 39477860 - 39477810
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataatttttt 243  Q
    |||||| |||||  |||||||||| ||||||||||||||||||||||||||    
T  39477860 ttgttttaaaatggatgtcacttttaatttccaatgcaataataatttttt 39477810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 9915441 - 9915494
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||| ||||| ||||||| ||||| |||||||||||||||||| ||||||||    
T  9915441 ttgttttaaaatgaatgtcattttcagtttccaatgcaataataaatttttctt 9915494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 12591235 - 12591182
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||| ||||| ||||||||||| | |||||||||||||||||| ||||||||    
T  12591235 ttgttttaaaatgaatgtcacttttagtttccaatgcaataataactttttctt 12591182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 16757347 - 16757294
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    ||||||||||||  |||||||||||| |||||||||||||||||| || |||||    
T  16757347 ttgtttcaaaatgtatgtcactttcagtttccaatgcaataataacttattctt 16757294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 26352234 - 26352181
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| ||||||||||| | ||| |||||||||||||| ||||||||    
T  26352234 ttgtttcaaaatgaatgtcacttttagttttcaatgcaataataactttttctt 26352181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 246
Target Start/End: Complemental strand, 49426565 - 49426515
Alignment:
Q  194 tgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||||||||||||  || ||| |||||||||||||||||||||||    
T  49426565 tgtttcaaaataaatgtcact--cagttttcaatgcaataataattttttctt 49426515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 49468864 - 49468811
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| ||||| ||||||| ||||||||||||||||||  |||||||    
T  49468864 ttgtttcaaaatgaatgtaactttcagtttccaatgcaataataacattttctt 49468811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 52024387 - 52024334
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||||||||| | ||||| ||| |||||||||||||| ||||||||    
T  52024387 ttgtttcaaaataaatgttattttcagttttcaatgcaataataaatttttctt 52024334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 246
Target Start/End: Complemental strand, 26595221 - 26595169
Alignment:
Q  194 tgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    ||||| ||||| ||||||||||||| ||| |||||||||||||| ||||||||    
T  26595221 tgttttaaaatgaatgtcactttcagtttacaatgcaataataaatttttctt 26595169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 46271468 - 46271420
Alignment:
Q  195 gtttcaaaataaatgtcactttcaatttccaatgcaataataatttttt 243  Q
    |||||||||| ||||||| ||||| ||||||||| ||||||||||||||    
T  46271468 gtttcaaaatgaatgtcattttcagtttccaatggaataataatttttt 46271420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 246
Target Start/End: Complemental strand, 49403023 - 49402971
Alignment:
Q  194 tgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    ||||||||||||||| ||  ||||| |||||||||||||||||| ||||||||    
T  49403023 tgtttcaaaataaatatcgttttcagtttccaatgcaataataactttttctt 49402971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 243
Target Start/End: Complemental strand, 1740794 - 1740744
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataatttttt 243  Q
    |||||| ||||| ||||||||||||| ||||||||| |||||||| |||||    
T  1740794 ttgttttaaaatgaatgtcactttcagtttccaatgaaataataacttttt 1740744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 246
Target Start/End: Original strand, 10842781 - 10842831
Alignment:
Q  196 tttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    ||||||||| ||||||||||||| ||| ||||||||||||||  |||||||    
T  10842781 tttcaaaatgaatgtcactttcagttttcaatgcaataataacattttctt 10842831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 246
Target Start/End: Original strand, 25487093 - 25487139
Alignment:
Q  200 aaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    ||||| ||||||||||||| ||| |||||||||||||| ||||||||    
T  25487093 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 25487139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 243
Target Start/End: Original strand, 27208987 - 27209037
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataatttttt 243  Q
    ||||||| |||| ||||||||||||  |||||||||||||||||| |||||    
T  27208987 ttgtttcgaaatgaatgtcactttcggtttccaatgcaataataacttttt 27209037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 243
Target Start/End: Original strand, 46045971 - 46046021
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataatttttt 243  Q
    |||||||||||| ||||||||||||| ||| | |||||||||||| |||||    
T  46045971 ttgtttcaaaatgaatgtcactttcagttttcgatgcaataataacttttt 46046021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 7191360 - 7191307
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||| |||||||||||||||||| |||| | ||| |||||||| ||||||||    
T  7191360 ttgttttaaaataaatgtcactttcgattttctatgtaataataactttttctt 7191307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 18794694 - 18794642
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||| ||||||||||||| ||||| |||| ||||||||||||| ||||||||    
T  18794694 ttgttttaaaataaatgtca-tttcagtttcgaatgcaataataactttttctt 18794642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 24483386 - 24483439
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| ||||||| ||||| |||||||| ||||||||| | ||||||    
T  24483386 ttgtttcaaaatgaatgtcagtttcagtttccaatacaataataactgtttctt 24483439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 31798587 - 31798640
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| || |||||||||| ||||| || ||||||||| ||||||||    
T  31798587 ttgtttcaaaatgaacgtcactttcagtttccgatacaataataactttttctt 31798640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 35848086 - 35848033
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||| ||| | ||||||||||||| ||| |||||||||||||| ||||||||    
T  35848086 ttgtttgaaagtgaatgtcactttcagtttacaatgcaataataactttttctt 35848033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 242
Target Start/End: Original strand, 38947653 - 38947702
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttt 242  Q
    |||||| ||||| ||||||||||||| | ||||||||||||||| |||||    
T  38947653 ttgttttaaaatgaatgtcactttcagtatccaatgcaataatatttttt 38947702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 44557197 - 44557144
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||| ||||| ||||||||||||| | ||||||||||||||||  |||||||    
T  44557197 ttgttttaaaatgaatgtcactttcagtctccaatgcaataataacattttctt 44557144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 237
Target Start/End: Original strand, 30292938 - 30292982
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataa 237  Q
    |||||| ||||| |||| |||||||| ||||||||||||||||||    
T  30292938 ttgttttaaaatgaatgccactttcagtttccaatgcaataataa 30292982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 246
Target Start/End: Original strand, 34110538 - 34110578
Alignment:
Q  206 aatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    ||||| ||||||| |||||||||||||||||| ||||||||    
T  34110538 aatgttactttcagtttccaatgcaataataactttttctt 34110578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 246
Target Start/End: Complemental strand, 46286958 - 46286918
Alignment:
Q  206 aatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    ||||||||||||| ||| |||||||||||||| ||||||||    
T  46286958 aatgtcactttcatttttcaatgcaataataactttttctt 46286918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 2e-17; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 716016 - 715963
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  716016 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataattttttctt 715963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 12977839 - 12977786
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  12977839 ttgtttcaaaatgaatgtcactttcaatttccaatgcaataataactttttctt 12977786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 193 - 244
Target Start/End: Original strand, 18292333 - 18292384
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttc 244  Q
    |||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  18292333 ttgtttcaaaatgaatgtcactttcaatttccaatgcaataataactttttc 18292384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 159 - 246
Target Start/End: Original strand, 37815688 - 37815775
Alignment:
Q  159 gtttcaaaatgagtgtcgttttagtcnnnnnnnnttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||| |||||||||||||||||| ||        |||||||||||| |||||| ||||||||||||||| ||||||||||||||||||    
T  37815688 gttttaaaatgagtgtcgttttaatcaaaaaaaattgtttcaaaatgaatgtcgctttcaatttccaatacaataataattttttctt 37815775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 22297994 - 22298047
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| ||||||||||||| |||||||||||||||||| ||||||||    
T  22297994 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 22298047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 45948783 - 45948730
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| ||||||||||||| |||||||||||||||||| ||||||||    
T  45948783 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 45948730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 158 - 246
Target Start/End: Original strand, 34274757 - 34274845
Alignment:
Q  158 tgtttcaaaatgagtgtcgttttagtcnnnnnnnnttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    ||||||||||||||||||| ||||| |        |||||||||||| ||||||||||||| ||||||||||||||||||  |||||||    
T  34274757 tgtttcaaaatgagtgtcgctttagccaaacaaatttgtttcaaaatgaatgtcactttcagtttccaatgcaataataaccttttctt 34274845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 246
Target Start/End: Original strand, 1741956 - 1742042
Alignment:
Q  159 gtttcaaaatgagtgtcgttttagtcnnnnnnnnttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||||||||||||||| |        |||||||||||| ||||||||||||| ||||||||||||||||||  |||||||    
T  1741956 gtttcaaaatgagtgtcgttttag-cccaaaaagttgtttcaaaatgaatgtcactttcagtttccaatgcaataataaccttttctt 1742042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 246
Target Start/End: Complemental strand, 45500014 - 45499927
Alignment:
Q  159 gtttcaaaatgagtgtcgttttagtcnnnnnnnnttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||||||||||||||| |        |||||||||||| ||| ||||||||| |||||||||| |||||||| |||||||    
T  45500014 gtttcaaaatgagtgtcgttttagccaaaagtagttgtttcaaaatgaatttcactttcagtttccaatgccataataatattttctt 45499927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 193 - 243
Target Start/End: Complemental strand, 24780459 - 24780409
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataatttttt 243  Q
    |||||||||||| ||||||||||||| |||| |||||||||||||||||||    
T  24780459 ttgtttcaaaatgaatgtcactttcagtttctaatgcaataataatttttt 24780409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 8603973 - 8604026
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||| ||||| || ||||||||||||||||||||||||||||| ||||||||    
T  8603973 ttgttttaaaatgaacgtcactttcaatttccaatgcaataataactttttctt 8604026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 31418666 - 31418613
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    ||||||||||||||||  |||||||| |||||||||||||||||| ||||||||    
T  31418666 ttgtttcaaaataaattccactttcagtttccaatgcaataataactttttctt 31418613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 37490782 - 37490835
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||| ||||||| ||||||||||||| ||| |||||||||||||||||||||||    
T  37490782 ttgtatcaaaatgaatgtcactttcagttttcaatgcaataataattttttctt 37490835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 42285906 - 42285959
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||| ||||| ||||||| ||||| |||||||||||||||||||||||||||    
T  42285906 ttgttttaaaatgaatgtcattttcagtttccaatgcaataataattttttctt 42285959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 44567194 - 44567141
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||| ||||| ||||||||||||||||| |||||||||||||| ||||||||    
T  44567194 ttgttttaaaatgaatgtcactttcaattttcaatgcaataataaatttttctt 44567141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 243
Target Start/End: Original strand, 4268575 - 4268659
Alignment:
Q  159 gtttcaaaatgagtgtcgttttagtcnnnnnnnnttgtttcaaaataaatgtcactttcaatttccaatgcaataataatttttt 243  Q
    |||| ||||||||||||||||||| |        |||||||||||| |||||| |||||||||||||||| ||||||| ||||||    
T  4268575 gttttaaaatgagtgtcgttttagacaaaagaaattgtttcaaaatgaatgtcgctttcaatttccaatgtaataatattttttt 4268659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 40927163 - 40927211
Alignment:
Q  195 gtttcaaaataaatgtcactttcaatttccaatgcaataataatttttt 243  Q
    |||||||||| ||||||||||||| |||||||||||||||||| |||||    
T  40927163 gtttcaaaatgaatgtcactttcagtttccaatgcaataataacttttt 40927211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 193 - 237
Target Start/End: Original strand, 42753706 - 42753750
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataa 237  Q
    |||||||||||| |||||||||||||||||||||| |||||||||    
T  42753706 ttgtttcaaaatgaatgtcactttcaatttccaatacaataataa 42753750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 48843550 - 48843602
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttct 245  Q
    |||||| ||||| ||||||||||||| ||| ||||||||||||||||||||||    
T  48843550 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataattttttct 48843602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 246
Target Start/End: Original strand, 2297002 - 2297089
Alignment:
Q  159 gtttcaaaatgagtgtcgttttagtcnnnnnnnnttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||||||||| ||||| |        |||||||||||| ||||||||||||| ||| |||||||||||||  ||||||||    
T  2297002 gtttcaaaatgagtgtcgctttagccaaaaaaaattgtttcaaaatgaatgtcactttcagttttcaatgcaataatatctttttctt 2297089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 242
Target Start/End: Complemental strand, 8334459 - 8334376
Alignment:
Q  159 gtttcaaaatgagtgtcgttttagtcnnnnnnnnttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttt 242  Q
    ||||||||||||||||||||| || |        |||||||||||| ||||||||||||| |||||||| ||||||||| ||||    
T  8334459 gtttcaaaatgagtgtcgtttaagccaaacaaaattgtttcaaaatcaatgtcactttcattttccaatccaataataaatttt 8334376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 197 - 244
Target Start/End: Original strand, 18270579 - 18270626
Alignment:
Q  197 ttcaaaataaatgtcactttcaatttccaatgcaataataattttttc 244  Q
    |||||||| ||||||||||||| |||||||||||||||||| ||||||    
T  18270579 ttcaaaatgaatgtcactttcagtttccaatgcaataataactttttc 18270626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 197 - 244
Target Start/End: Complemental strand, 21752260 - 21752213
Alignment:
Q  197 ttcaaaataaatgtcactttcaatttccaatgcaataataattttttc 244  Q
    |||||||||||||||| ||||| |||||||||||||||||| ||||||    
T  21752260 ttcaaaataaatgtcattttcagtttccaatgcaataataactttttc 21752213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 200 - 246
Target Start/End: Original strand, 10476141 - 10476187
Alignment:
Q  200 aaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    ||||| ||||||||||||| |||||||||||||||||| ||||||||    
T  10476141 aaaatgaatgtcactttcactttccaatgcaataataactttttctt 10476187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 200 - 246
Target Start/End: Original strand, 25440877 - 25440923
Alignment:
Q  200 aaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||| |||||||||||| |||||||||||||||||| ||||||||    
T  25440877 aaaatatatgtcactttcagtttccaatgcaataataactttttctt 25440923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 193 - 243
Target Start/End: Original strand, 35777817 - 35777867
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataatttttt 243  Q
    |||||||||||||||||||||||||  |||| ||||||||||||| |||||    
T  35777817 ttgtttcaaaataaatgtcactttcggtttctaatgcaataataacttttt 35777867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 159 - 237
Target Start/End: Original strand, 40339423 - 40339501
Alignment:
Q  159 gtttcaaaatgagtgtcgttttagtcnnnnnnnnttgtttcaaaataaatgtcactttcaatttccaatgcaataataa 237  Q
    |||| ||||||||||||||||||| |        |||||||||||| | ||||||||||||||| ||||||||||||||    
T  40339423 gttttaaaatgagtgtcgttttagccaaaaagaattgtttcaaaatgactgtcactttcaattttcaatgcaataataa 40339501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 13405280 - 13405227
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||| ||||| ||||||||||||| ||||||||| |||||||| ||||||||    
T  13405280 ttgttttaaaatgaatgtcactttcagtttccaatgtaataataactttttctt 13405227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 23935420 - 23935473
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||| ||||||||||||  ||||| |||||||||||||||||| ||||||||    
T  23935420 ttgttttaaaataaatgtcgttttcagtttccaatgcaataataactttttctt 23935473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 24133267 - 24133230
Alignment:
Q  209 gtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||| |||||||||||||||||||||||||||    
T  24133267 gtcactttcagtttccaatgcaataataattttttctt 24133230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 24680126 - 24680179
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||| ||||| ||||||| ||||| |||||||||||||||||| ||||||||    
T  24680126 ttgttttaaaatgaatgtcattttcagtttccaatgcaataataactttttctt 24680179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 197 - 246
Target Start/End: Original strand, 37502321 - 37502370
Alignment:
Q  197 ttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||| || |||||||||| |||||||||||||||||| ||||||||    
T  37502321 ttcaaaatgaacgtcactttcagtttccaatgcaataataactttttctt 37502370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 245
Target Start/End: Original strand, 39557327 - 39557372
Alignment:
Q  200 aaaataaatgtcactttcaatttccaatgcaataataattttttct 245  Q
    ||||||||||||||||||| ||| ||||| ||||||||||||||||    
T  39557327 aaaataaatgtcactttcagttttcaatgtaataataattttttct 39557372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 41137726 - 41137779
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||| ||| |||| |||||| | |||||||||||||||||||||||||||    
T  41137726 ttgtttcacaatgaatgccacttttagtttccaatgcaataataattttttctt 41137779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 42880087 - 42880034
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| ||||||||||||| ||| ||||| |||||||| ||||||||    
T  42880087 ttgtttcaaaatgaatgtcactttcagttttcaatgtaataataactttttctt 42880034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 246
Target Start/End: Original strand, 10599212 - 10599264
Alignment:
Q  194 tgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    ||||||||||| ||| ||||||||| ||| |||||||||||||| ||||||||    
T  10599212 tgtttcaaaatgaatatcactttcagttttcaatgcaataataactttttctt 10599264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 198 - 246
Target Start/End: Original strand, 48684726 - 48684774
Alignment:
Q  198 tcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    ||||||| ||||||||||||  |||||||||||||||||| ||||||||    
T  48684726 tcaaaatgaatgtcactttcggtttccaatgcaataataactttttctt 48684774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 198 - 237
Target Start/End: Complemental strand, 29636375 - 29636336
Alignment:
Q  198 tcaaaataaatgtcactttcaatttccaatgcaataataa 237  Q
    ||||||||||||||||||||| |||| |||||||||||||    
T  29636375 tcaaaataaatgtcactttcagtttctaatgcaataataa 29636336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 243
Target Start/End: Original strand, 27935765 - 27935815
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataatttttt 243  Q
    |||||| ||||| ||||||||||||| ||| |||||||||||||| |||||    
T  27935765 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataacttttt 27935815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 246
Target Start/End: Complemental strand, 27947647 - 27947601
Alignment:
Q  200 aaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    ||||| ||||||||||||| ||| |||||||||||||| ||||||||    
T  27947647 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 27947601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 242
Target Start/End: Original strand, 6747225 - 6747274
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttt 242  Q
    |||||| ||||  ||||||||||||| |||||||||||||||||| ||||    
T  6747225 ttgtttaaaaacgaatgtcactttcagtttccaatgcaataataactttt 6747274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 19105154 - 19105101
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||| ||||| ||||||||||||| |||  ||||||||||||| ||||||||    
T  19105154 ttgttttaaaatgaatgtcactttcagtttttaatgcaataataactttttctt 19105101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 246
Target Start/End: Complemental strand, 29531080 - 29531035
Alignment:
Q  201 aaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||| ||||||| ||||| ||| |||||||||||||||||||||||    
T  29531080 aaatgaatgtcattttcagttttcaatgcaataataattttttctt 29531035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 237
Target Start/End: Original strand, 1031153 - 1031197
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataa 237  Q
    |||||||||||| |||||||| |||| |||||| |||||||||||    
T  1031153 ttgtttcaaaatgaatgtcaccttcagtttccattgcaataataa 1031197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 237
Target Start/End: Complemental strand, 32501902 - 32501858
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataa 237  Q
    |||||| ||||||||| ||||||||| ||| ||||||||||||||    
T  32501902 ttgttttaaaataaatatcactttcagttttcaatgcaataataa 32501858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 237
Target Start/End: Original strand, 44453141 - 44453177
Alignment:
Q  201 aaataaatgtcactttcaatttccaatgcaataataa 237  Q
    |||| ||||||||||||| ||||||||||||||||||    
T  44453141 aaatgaatgtcactttcagtttccaatgcaataataa 44453177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 2e-17; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 47895496 - 47895443
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  47895496 ttgtttcaaaatgaatgtcactttcaatttccaatgcaataataactttttctt 47895443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 50646262 - 50646209
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  50646262 ttgtttcaaaataaatgtcactttcagtttccaatgcaataataactttttctt 50646209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 159 - 246
Target Start/End: Original strand, 38016340 - 38016426
Alignment:
Q  159 gtttcaaaatgagtgtcgttttagtcnnnnnnnnttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||||||||||||||| |        |||||||||||| ||||||||||||| |||||||||||||||||| ||||||||    
T  38016340 gtttcaaaatgagtgtcgttttag-ccaaagaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 38016426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 246
Target Start/End: Complemental strand, 32492364 - 32492280
Alignment:
Q  159 gtttcaaaatgagtgtcgttttagtcnnnnnnnnttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||||||||||||||| |        |||||||||||| ||||||||||||||||| |||||||||||||| ||||||||    
T  32492364 gtttcaaaatgagtgtcgttttaggcaaaaa---ttgtttcaaaatgaatgtcactttcaattttcaatgcaataataactttttctt 32492280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 4758989 - 4759042
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||| ||||||||||||||||||| |||||||||||||||||| ||||||||    
T  4758989 ttgttttaaaataaatgtcactttcactttccaatgcaataataactttttctt 4759042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 158 - 246
Target Start/End: Original strand, 30431084 - 30431171
Alignment:
Q  158 tgtttcaaaatgagtgtcgttttagtcnnnnnnnnttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    ||||||||||||||||||||||||| |        || ||||||||| ||||||||||||| ||| |||||||||||||||||||||||    
T  30431084 tgtttcaaaatgagtgtcgttttag-ccaaaaaaattatttcaaaatgaatgtcactttcagttttcaatgcaataataattttttctt 30431171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 198 - 246
Target Start/End: Complemental strand, 36729957 - 36729909
Alignment:
Q  198 tcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  36729957 tcaaaatgaatgtcactttcaatttccaatgcaataataactttttctt 36729909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 246
Target Start/End: Complemental strand, 42571715 - 42571628
Alignment:
Q  159 gtttcaaaatgagtgtcgttttagtcnnnnnnnnttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||||||||| ||||| |        |||||||||||| |||||||||| || |||||||||||||||||| ||||||||    
T  42571715 gtttcaaaatgagtgtcgctttagccaaaaaaaattgtttcaaaatgaatgtcacttgcagtttccaatgcaataataactttttctt 42571628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 2458005 - 2458058
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| ||||||||||||| |||||||| ||||||||| ||||||||    
T  2458005 ttgtttcaaaatgaatgtcactttcagtttccaatacaataataactttttctt 2458058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 3152958 - 3152905
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| ||||||||||||| ||| |||||||||||||| ||||||||    
T  3152958 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 3152905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 11019978 - 11019925
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||| ||||| ||||||||||||| ||| |||||||||||||||||||||||    
T  11019978 ttgttttaaaattaatgtcactttcatttttcaatgcaataataattttttctt 11019925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 11393543 - 11393596
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||| ||||| ||||||| |||||||||||||||||||||||| ||||||||    
T  11393543 ttgttttaaaatgaatgtcattttcaatttccaatgcaataataactttttctt 11393596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 19115385 - 19115438
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| ||||||||||| | |||||||||||||||||| ||||||||    
T  19115385 ttgtttcaaaatgaatgtcactttgagtttccaatgcaataataactttttctt 19115438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 30426476 - 30426423
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| ||||||| ||||| |||||||||||||||||| ||||||||    
T  30426476 ttgtttcaaaatgaatgtcattttcagtttccaatgcaataataactttttctt 30426423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 31853714 - 31853661
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||||||||||||||| | |||||| | ||||||||||||||||||    
T  31853714 ttgtttcaaaataaatgtcacttttagtttccagtacaataataattttttctt 31853661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 35557910 - 35557857
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||| |||||| || ||||||||| |||||||||||||||||||||||||||    
T  35557910 ttgttttaaaatatatatcactttcagtttccaatgcaataataattttttctt 35557857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 36844894 - 36844841
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||  ||||||||||||| ||| |||||||||||||||||||||||    
T  36844894 ttgtttcaaaaccaatgtcactttcagttttcaatgcaataataattttttctt 36844841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 42886749 - 42886802
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| ||||| ||||| |||||||||||||||||||| ||||||||    
T  42886749 ttgtttcaaaatgaatgttactttaaatttccaatgcaataataactttttctt 42886802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 44676219 - 44676272
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| ||||||||||||| ||||||||||||| |||| ||||||||    
T  44676219 ttgtttcaaaatgaatgtcactttcagtttccaatgcaatgataactttttctt 44676272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 48901718 - 48901771
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| ||||||| ||||| |||||||||||||||||| ||||||||    
T  48901718 ttgtttcaaaatgaatgtcattttcagtttccaatgcaataataactttttctt 48901771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 48903284 - 48903337
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| ||||||| ||||| |||||||||||||||||| ||||||||    
T  48903284 ttgtttcaaaatgaatgtcattttcagtttccaatgcaataataactttttctt 48903337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 246
Target Start/End: Complemental strand, 31583620 - 31583533
Alignment:
Q  159 gtttcaaaatgagtgtcgttttagtcnnnnnnnnttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||| ||||||||||||||||||||         |||||| ||||| ||||||||||||| |||||| |||||||||||| |||||||    
T  31583620 gttttaaaatgagtgtcgttttagtaaaaaaaaattgttttaaaattaatgtcactttcagtttccagtgcaataataatcttttctt 31583533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 38140949 - 38140992
Alignment:
Q  194 tgtttcaaaataaatgtcactttcaatttccaatgcaataataa 237  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||    
T  38140949 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataa 38140992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 246
Target Start/End: Original strand, 39356849 - 39356936
Alignment:
Q  159 gtttcaaaatgagtgtcgttttagtcnnnnnnnnttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||||| ||||||||||         |||||| ||||||||||||||||||| ||| ||||||||||||||  |||||||    
T  39356849 gtttcaaaatgagtatcgttttagttaaaaaaaattgttttaaaataaatgtcactttcagttttcaatgcaataataacattttctt 39356936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 246
Target Start/End: Original strand, 51397974 - 51398061
Alignment:
Q  159 gtttcaaaatgagtgtcgttttagtcnnnnnnnnttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||| ||||||||||||||||||| |        |||||||||||||||||||||||| | ||| ||||| |||||||| ||||||||    
T  51397974 gttttaaaatgagtgtcgttttagccaaaaaaaattgtttcaaaataaatgtcacttttagttttcaatgtaataataactttttctt 51398061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 196 - 246
Target Start/End: Original strand, 40487829 - 40487879
Alignment:
Q  196 tttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    ||||||||| |||||||||||  ||||||||||||||||||| ||||||||    
T  40487829 tttcaaaatgaatgtcacttttgatttccaatgcaataataactttttctt 40487879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 23525468 - 23525415
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||| ||||||||||| |||||  ||||||||||||||||||| ||||||||    
T  23525468 ttgttttaaaataaatgttacttttgatttccaatgcaataataagtttttctt 23525415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 30315307 - 30315360
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| ||||||||||||  |||||||||||| ||||| ||||||||    
T  30315307 ttgtttcaaaatgaatgtcactttccgtttccaatgcaagaataactttttctt 30315360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 45213874 - 45213821
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||| ||||| ||||||||||||| |||| ||||||||||||| ||||||||    
T  45213874 ttgttttaaaatgaatgtcactttcagtttctaatgcaataataactttttctt 45213821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 50038323 - 50038270
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||| ||||| ||||||||||||| ||| |||||||||||||| ||||||||    
T  50038323 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 50038270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 246
Target Start/End: Original strand, 36460805 - 36460857
Alignment:
Q  194 tgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    ||||||||||| ||| ||||||||| ||| |||||||||||||| ||||||||    
T  36460805 tgtttcaaaatgaatatcactttcagttttcaatgcaataataactttttctt 36460857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 243
Target Start/End: Original strand, 19373584 - 19373634
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataatttttt 243  Q
    |||||||||||| | ||||||||||||||| ||||| |||||||| |||||    
T  19373584 ttgtttcaaaatgactgtcactttcaattttcaatgaaataataacttttt 19373634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 23208441 - 23208390
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| ||||||||||||| |||||||  ||||||||| ||||||||    
T  23208441 ttgtttcaaaatgaatgtcactttcagtttccaa--caataataactttttctt 23208390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 243
Target Start/End: Complemental strand, 33194183 - 33194133
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataatttttt 243  Q
    |||||| ||||| ||||||||||||| ||||||||||||| |||| |||||    
T  33194183 ttgttttaaaatgaatgtcactttcagtttccaatgcaatgataacttttt 33194133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 237
Target Start/End: Original strand, 38363785 - 38363827
Alignment:
Q  195 gtttcaaaataaatgtcactttcaatttccaatgcaataataa 237  Q
    |||||||||| ||||||||||||| ||| ||||||||||||||    
T  38363785 gtttcaaaatgaatgtcactttcagtttacaatgcaataataa 38363827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 4392194 - 4392247
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| ||||||| ||||| ||||||||  |||||||| ||||||||    
T  4392194 ttgtttcaaaatgaatgtcagtttcagtttccaatttaataataactttttctt 4392247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 22857088 - 22857141
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||| ||||| |||||||||||| |||| ||||| |||||||| ||||||||    
T  22857088 ttgttttaaaatgaatgtcactttcgattttcaatgtaataataactttttctt 22857141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 41850388 - 41850441
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||| ||||| |||| |||||| | |||||||||||||||||| ||||||||    
T  41850388 ttgttttaaaatgaatgacacttttagtttccaatgcaataataactttttctt 41850441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 47823603 - 47823550
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||| ||||||||||||| ||| | |||  ||||||||||||||||||||||    
T  47823603 ttgttttaaaataaatgtcatttttagtttttaatgcaataataattttttctt 47823550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 246
Target Start/End: Original strand, 52654310 - 52654355
Alignment:
Q  201 aaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||||||||| ||| |||| ||||||||| ||||||||    
T  52654310 aaataaatgtcactttcagttttcaatacaataataactttttctt 52654355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 53200832 - 53200779
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||| ||||| ||||||||||| | ||| |||||||||||||| ||||||||    
T  53200832 ttgttttaaaatgaatgtcacttttagttttcaatgcaataataactttttctt 53200779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 246
Target Start/End: Complemental strand, 7231047 - 7230995
Alignment:
Q  194 tgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    ||||||||||| ||||||||||| | || | ||||||||||||| ||||||||    
T  7231047 tgtttcaaaatgaatgtcacttttagttacgaatgcaataataactttttctt 7230995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 159 - 246
Target Start/End: Complemental strand, 24929 - 24842
Alignment:
Q  159 gtttcaaaatgagtgtcgttttagtcnnnnnnnnttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||||||||||||||  |        |||||||||||| ||||||||||||| |||||||||||||||||| ||||||||    
T  24929 gtttcaaaatgagtgtcgttttatccaaaaaaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 24842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 4e-16; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 159 - 246
Target Start/End: Complemental strand, 2729975 - 2729888
Alignment:
Q  159 gtttcaaaatgagtgtcgttttagtcnnnnnnnnttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||||||||||||||  |        |||||||||||| ||||||||||||| |||||||||||||||||| ||||||||    
T  2729975 gtttcaaaatgagtgtcgttttaaccaaaaaaacttgtttcaaaatgaatgtcactttcactttccaatgcaataataactttttctt 2729888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 159 - 246
Target Start/End: Complemental strand, 14620683 - 14620596
Alignment:
Q  159 gtttcaaaatgagtgtcgttttagtcnnnnnnnnttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||||||||||||||| |        || ||||||||| ||||||||||||| |||||||||||||||||| ||||||||    
T  14620683 gtttcaaaatgagtgtcgttttagccaaaaaaaattatttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 14620596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 159 - 246
Target Start/End: Complemental strand, 21319499 - 21319412
Alignment:
Q  159 gtttcaaaatgagtgtcgttttagtcnnnnnnnnttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||||| |||||||||||        |||||||||||| |||||||||||||  ||||||||||||||||| ||||||||    
T  21319499 gtttcaaaatgagtatcgttttagtcaaaaaaatttgtttcaaaatgaatgtcactttcagcttccaatgcaataataactttttctt 21319412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 7317026 - 7317079
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| ||||||||||||| |||||||||||||||||| ||||||||    
T  7317026 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 7317079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 10345087 - 10345034
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| ||||||||||||| |||||||||||||||||| ||||||||    
T  10345087 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 10345034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 24280991 - 24281044
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| ||||||||||| | |||||||||||||||||||||||||||    
T  24280991 ttgtttcaaaatgaatgtcacttttagtttccaatgcaataataattttttctt 24281044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 24381221 - 24381168
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| ||||||||||| | |||||||||||||||||||||||||||    
T  24381221 ttgtttcaaaatgaatgtcacttttagtttccaatgcaataataattttttctt 24381168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 42104218 - 42104165
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| ||||||||||||| |||||||||||||||||| ||||||||    
T  42104218 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 42104165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 200 - 246
Target Start/End: Complemental strand, 3306157 - 3306111
Alignment:
Q  200 aaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||    
T  3306157 aaaatgaatgtcactttcagtttccaatgcaataataattttttctt 3306111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 246
Target Start/End: Original strand, 39566152 - 39566234
Alignment:
Q  164 aaaatgagtgtcgttttagtcnnnnnnnnttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    ||||||||||||||||||| |        |||||| ||||| ||||||||||||| |||||||||||||||||| ||||||||    
T  39566152 aaaatgagtgtcgttttagcccaaaaaatttgttttaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 39566234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 3025086 - 3025033
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| ||||||||||| | |||||||||||||||||| ||||||||    
T  3025086 ttgtttcaaaatgaatgtcacttttagtttccaatgcaataataactttttctt 3025033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 13761555 - 13761608
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| ||||||||||||| ||| |||||||||||||| ||||||||    
T  13761555 ttgtttcaaaatgaatgtcactttcacttttcaatgcaataataaatttttctt 13761608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 26660753 - 26660806
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||| ||||| ||||||||||||||||| |||||||||||||| ||||||||    
T  26660753 ttgttttaaaatgaatgtcactttcaattttcaatgcaataataactttttctt 26660806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 26932346 - 26932399
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||| ||||| ||||||||||||||||| |||||||||||||| ||||||||    
T  26932346 ttgttttaaaatgaatgtcactttcaattttcaatgcaataataactttttctt 26932399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 194 - 242
Target Start/End: Complemental strand, 38362291 - 38362243
Alignment:
Q  194 tgtttcaaaataaatgtcactttcaatttccaatgcaataataattttt 242  Q
    ||||||||||| ||||||||||||||||| |||||||||||||| ||||    
T  38362291 tgtttcaaaatgaatgtcactttcaattttcaatgcaataataactttt 38362243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 246
Target Start/End: Complemental strand, 4911338 - 4911252
Alignment:
Q  159 gtttcaaaatgagtgtcgttttagtcnnnnnnnnttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    ||||||||||||||||||||| ||||        |||||||||||||||||||||||| | ||||||||| |||||||  ||||||||    
T  4911338 gtttcaaaatgagtgtcgttt-agtcaaaaaaaattgtttcaaaataaatgtcacttttagtttccaatgtaataatacctttttctt 4911252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 246
Target Start/End: Original strand, 21195343 - 21195430
Alignment:
Q  159 gtttcaaaatgagtgtcgttttagtcnnnnnnnnttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||||||||||||| |||        || ||||||||| | ||||| ||| | |||||||||||||||||||||||||||    
T  21195343 gtttcaaaatgagtgtcgttttggtcaaaaatatttatttcaaaatgattgtcaatttaagtttccaatgcaataataattttttctt 21195430  T

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Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 200 - 246
Target Start/End: Original strand, 27797786 - 27797832
Alignment:
Q  200 aaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    ||||| ||||||||||||| |||||||||||||||||| ||||||||    
T  27797786 aaaatgaatgtcactttcagtttccaatgcaataataactttttctt 27797832  T

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Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 6518974 - 6519027
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| |||||| |||||| ||| |||||||||||||| ||||||||    
T  6518974 ttgtttcaaaatgaatgtcgctttcagttttcaatgcaataataactttttctt 6519027  T

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Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 243
Target Start/End: Complemental strand, 15167164 - 15167115
Alignment:
Q  194 tgtttcaaaataaatgtcactttcaatttccaatgcaataataatttttt 243  Q
    ||||||||||| ||||||||||||| ||| |||||||||||||| |||||    
T  15167164 tgtttcaaaatgaatgtcactttcagttttcaatgcaataataacttttt 15167115  T

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Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 246
Target Start/End: Original strand, 4630870 - 4630916
Alignment:
Q  200 aaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    ||||||||||||||||||| ||| |||| ||||||||| ||||||||    
T  4630870 aaaataaatgtcactttcagttttcaatacaataataactttttctt 4630916  T

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Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 246
Target Start/End: Complemental strand, 9066611 - 9066525
Alignment:
Q  160 tttcaaaatgagtgtcgttttagtcnnnnnnnnttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    ||||||||| | |||||||||||||        |||||||||||| ||||| ||||||| ||| ||||||||||||||  |||||||    
T  9066611 tttcaaaataaatgtcgttttagtcaagaaaaattgtttcaaaatgaatgttactttcagttttcaatgcaataataaaattttctt 9066525  T

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Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 39504720 - 39504774
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaa-taataattttttctt 246  Q
    |||||| ||||| ||||||||||||| |||||||||||| |||||| ||||||||    
T  39504720 ttgttttaaaatgaatgtcactttcagtttccaatgcaattaataactttttctt 39504774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 246
Target Start/End: Original strand, 39729960 - 39730010
Alignment:
Q  196 tttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    ||||||||| ||||| | ||||| |||||||||||||||||| ||||||||    
T  39729960 tttcaaaatgaatgttattttcagtttccaatgcaataataactttttctt 39730010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 25362955 - 25362902
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| ||||| ||||||| |||| ||||||||||| | ||||||||    
T  25362955 ttgtttcaaaatgaatgttactttcagtttcgaatgcaataatgactttttctt 25362902  T

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Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 27600397 - 27600450
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||| ||||||||| |  |||||| |||||||||||||||||| ||||||||    
T  27600397 ttgttttaaaataaatattgctttcagtttccaatgcaataataactttttctt 27600450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 197 - 246
Target Start/End: Complemental strand, 35766051 - 35766002
Alignment:
Q  197 ttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||| ||||||||||||| ||| |||| ||||||||| ||||||||    
T  35766051 ttcaaaatgaatgtcactttcagttttcaatacaataataactttttctt 35766002  T

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Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 36073785 - 36073732
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    ||||||| |||| ||||||| ||| ||||| |||||||||||||| ||||||||    
T  36073785 ttgtttctaaatgaatgtcattttaaattttcaatgcaataataactttttctt 36073732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 243
Target Start/End: Original strand, 34534365 - 34534406
Alignment:
Q  200 aaaataaatgtcactttcaatttccaatgcaataataatttttt 243  Q
    ||||| |||||||||||||  |||||||||||||||||||||||    
T  34534365 aaaatgaatgtcactttca--ttccaatgcaataataatttttt 34534406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 215 - 243
Target Start/End: Complemental strand, 34972775 - 34972747
Alignment:
Q  215 ttcaatttccaatgcaataataatttttt 243  Q
    |||||||||||||||||||||||||||||    
T  34972775 ttcaatttccaatgcaataataatttttt 34972747  T

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Target: scaffold2107 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold2107
Description:

Target: scaffold2107; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 200 - 246
Target Start/End: Complemental strand, 661 - 615
Alignment:
Q  200 aaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||    
T  661 aaaatgaatgtcactttcagtttccaatgcaataataattttttctt 615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 3965 - 3912
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| ||||||||||||| ||| |||||||||||||| ||||||||    
T  3965 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 3912  T

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Target: scaffold0565 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 246
Target Start/End: Complemental strand, 9830 - 9743
Alignment:
Q  159 gtttcaaaatgagtgtcgttttagtcnnnnnnnnttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| ||||||||||| |        |||||| ||||| ||||||| ||||| |||||||||||||||||| ||||||||    
T  9830 gtttcaaaatgactgtcgttttagccaaaaaaaattgttttaaaatgaatgtcattttcagtttccaatgcaataataactttttctt 9743  T

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Target: scaffold0565; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 243
Target Start/End: Complemental strand, 10110 - 10060
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataatttttt 243  Q
    |||||| ||||| ||||||||||||||||| |||| | |||||||||||||    
T  10110 ttgttttaaaatgaatgtcactttcaattttcaatactataataatttttt 10060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 246
Target Start/End: Complemental strand, 18443 - 18356
Alignment:
Q  159 gtttcaaaatgagtgtcgttttagtcnnnnnnnnttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||| ||||||||||||||         ||| |||||||| ||||||| ||||| |||||||||||||||||| ||||||||    
T  18443 gtttcaaaataagtgtcgttttagtaaaaaaaaattggttcaaaatgaatgtcattttcagtttccaatgcaataataactttttctt 18356  T

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Target: scaffold0048 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 246
Target Start/End: Original strand, 62597 - 62684
Alignment:
Q  159 gtttcaaaatgagtgtcgttttagtcnnnnnnnnttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||||| ||||||||||         |||||||||||| ||||||||||||| ||||| ||| |||||||| ||||||||    
T  62597 gtttcaaaatgagtatcgttttagtaaaaaaaaattgtttcaaaatgaatgtcactttcagtttcctatgtaataataactttttctt 62684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 200 - 246
Target Start/End: Complemental strand, 719 - 673
Alignment:
Q  200 aaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    ||||| |||||||||| ||||||||||||||||||||| ||||||||    
T  719 aaaatgaatgtcacttacaatttccaatgcaataataactttttctt 673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0300 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 196 - 246
Target Start/End: Original strand, 4566 - 4616
Alignment:
Q  196 tttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    ||||||||| ||||||||||| |||||  ||||||||||||||||||||||    
T  4566 tttcaaaatgaatgtcacttttaatttttaatgcaataataattttttctt 4616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 196 - 246
Target Start/End: Complemental strand, 3656 - 3606
Alignment:
Q  196 tttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    ||||||||| ||||||||||||| |||||||| ||||||||| ||||||||    
T  3656 tttcaaaatgaatgtcactttcagtttccaatacaataataactttttctt 3606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0983 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0983
Description:

Target: scaffold0983; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 841 - 788
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||| ||| ||||||||||||| |||||| || |||||||||||||||||    
T  841 ttgtttcacaatgaatgtcactttcagtttccactggaataataattttttctt 788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 1568 - 1515
Alignment:
Q  193 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataattttttctt 246  Q
    |||||||||||| ||||||||||||| |||| |||||||| |||| ||||||||    
T  1568 ttgtttcaaaatgaatgtcactttcagtttctaatgcaatgataactttttctt 1515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 246
Target Start/End: Complemental strand, 21221 - 21183
Alignment:
Q  208 tgtcactttcaatttccaatgcaataataattttttctt 246  Q
    ||||||||||| |||| ||||||||||||||||||||||    
T  21221 tgtcactttcagtttcaaatgcaataataattttttctt 21183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 246
Target Start/End: Original strand, 4160 - 4192
Alignment:
Q  214 tttcaatttccaatgcaataataattttttctt 246  Q
    ||||||||| |||||||||||||||||||||||    
T  4160 tttcaattttcaatgcaataataattttttctt 4192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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