View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10142_high_20 (Length: 273)
Name: NF10142_high_20
Description: NF10142
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10142_high_20 |
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Alignment Details
Target: chr3 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 50879356 - 50879100
Alignment:
| Q |
1 |
caggaaagtgcagtaaacatgaaacaagattcaatgtgatggtcatatcattgatgggaagatgaaaattattggtctctctaaaccctcgctctttaaa |
100 |
Q |
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| T |
50879356 |
caggaaagtgcagtaaacatgaaacaagattcaatgtgatggtcatatcattgatgggaagatgaaaattattggtctctctaaaccctcgctctttaaa |
50879257 |
T |
|
| Q |
101 |
tattgtgaatacacttaggttaatttgatcatagatggtacctgaaagttgaaaaagacttaaaacctcaataatatcctaaagccatctcataagatat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
50879256 |
tattgtgaatacacttaggttaatttgatcatagatggtacctgaaagttgaaaaagacttaaaacctcaataatatcctaaagccatctcataagatat |
50879157 |
T |
|
| Q |
201 |
tactatttattgatgttgattatccttttcccattgttgatgcacttgagttgtctc |
257 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
50879156 |
tactatttattgatgttgattatccttttcccattgttgatgcacttgagttgtctc |
50879100 |
T |
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