View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10142_high_24 (Length: 261)
Name: NF10142_high_24
Description: NF10142
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10142_high_24 |
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Alignment Details
Target: chr1 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 17 - 256
Target Start/End: Original strand, 45707180 - 45707412
Alignment:
| Q |
17 |
agaaatgatattaaggtgatgtgtgctttactttttccctcactgtgcaattaaattttattctcgaatacatggatatgtgaattacctgaagactgaa |
116 |
Q |
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| T |
45707180 |
agaaatgatattaaggtgatgtgtgctttactttttccctcactatgcaattaaattttattctcgaatacatggatatgtgaattacctga-------a |
45707272 |
T |
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| Q |
117 |
gtccttgctaagtgaggcaaatcaaatgttttgttgttagttatgatttcgctgtgagtttctaattaatgcatttgtgactatttgttacgaattgtct |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45707273 |
gtccttgctaagtgaggcaaatcaaatgttttgttgttagttatgatttcgctgtgagtttctaattaatgcatttgtgactatttgttacgaattgtct |
45707372 |
T |
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| Q |
217 |
ccagttatcagtaaaccgttgtgtactttttcatctcact |
256 |
Q |
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|||||||||||||||||||||||||||||||||| ||||| |
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| T |
45707373 |
ccagttatcagtaaaccgttgtgtactttttcatgtcact |
45707412 |
T |
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