View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10142_high_39 (Length: 237)
Name: NF10142_high_39
Description: NF10142
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10142_high_39 |
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Alignment Details
Target: chr7 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 5 - 219
Target Start/End: Original strand, 43396467 - 43396681
Alignment:
| Q |
5 |
ttgttgacatcacacgggaaggagcaagatcttccaattccatctcaccaataaaattattaaaaagatacatctccaataattgaccacttgaagtttc |
104 |
Q |
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| T |
43396467 |
ttgttgacatcacacgggaaggagcgagatcttccaattccatctcaccaataaaattattaaaaagatacatctccaataattgaccacttgaagtttc |
43396566 |
T |
|
| Q |
105 |
ttcattaattccccttctttcatctctccggcacaccacattaaaatctccaagaatacaccactccccttcacctctattagcacgctcctccactaac |
204 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
43396567 |
ttcattaattccccttctttcatctctccggcacaccacattaaaatctccaagaatacaccacgccccttcacctctattagcacgctcctccactaac |
43396666 |
T |
|
| Q |
205 |
gcctcccacatcctc |
219 |
Q |
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| T |
43396667 |
gcctcccacatcctc |
43396681 |
T |
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