View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10142_low_63 (Length: 237)
Name: NF10142_low_63
Description: NF10142
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10142_low_63 |
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Alignment Details
Target: chr2 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 31041563 - 31041785
Alignment:
| Q |
1 |
tatatgaatatagaacatggataagacccttttccatgaaaacaaatgggatataaccctctatttctagtaacaatgtaaccttagacttcgtaaaaga |
100 |
Q |
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| T |
31041563 |
tatatgaatatagaacatggataagacctttttccatgaaaacaaatgggatataaccctctatttctagtaacaatgtaaccttagacttcgtaaaaga |
31041662 |
T |
|
| Q |
101 |
aatgtaacagaagacaattttcatcatgggtctaagattatggtctacacccttattcatttagactaaacttaggtgtccaaagcctatcacaaatgag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31041663 |
aatgtaacagaagacaattttcatcatgggtctaagattatggtctacacccttattcatttagactaaacttaggtgtccaaagcctatcacaaatgag |
31041762 |
T |
|
| Q |
201 |
cgttacttttttgacctcccata |
223 |
Q |
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||||||||||||||||||||||| |
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| T |
31041763 |
cgttacttttttgacctcccata |
31041785 |
T |
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