View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10142_low_68 (Length: 227)

Name: NF10142_low_68
Description: NF10142
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10142_low_68
NF10142_low_68
[»] scaffold0009 (2 HSPs)
scaffold0009 (1-100)||(49505-49604)
scaffold0009 (44-100)||(49579-49635)
[»] chr1 (55 HSPs)
chr1 (1-104)||(39401997-39402100)
chr1 (102-207)||(31159241-31159346)
chr1 (1-100)||(9981647-9981746)
chr1 (1-100)||(27159389-27159488)
chr1 (1-100)||(31842826-31842925)
chr1 (1-100)||(44668124-44668223)
chr1 (1-100)||(47216730-47216829)
chr1 (1-100)||(11795933-11796032)
chr1 (1-100)||(12483659-12483758)
chr1 (1-100)||(14984837-14984936)
chr1 (1-100)||(23278032-23278131)
chr1 (1-100)||(26471096-26471195)
chr1 (1-100)||(34042696-34042795)
chr1 (4-100)||(44955240-44955336)
chr1 (1-100)||(1050888-1050987)
chr1 (1-100)||(47777512-47777611)
chr1 (1-100)||(47588368-47588467)
chr1 (1-100)||(17556752-17556852)
chr1 (1-88)||(25694331-25694418)
chr1 (1-94)||(47969700-47969794)
chr1 (1-100)||(11897054-11897153)
chr1 (1-100)||(16448139-16448238)
chr1 (1-100)||(12213505-12213604)
chr1 (1-102)||(37552139-37552240)
chr1 (5-85)||(11989796-11989876)
chr1 (54-100)||(11897138-11897184)
chr1 (46-92)||(37552217-37552263)
chr1 (44-100)||(12483628-12483684)
chr1 (54-94)||(44955212-44955252)
chr1 (54-100)||(11796017-11796063)
chr1 (54-100)||(14984921-14984967)
chr1 (54-100)||(17556837-17556883)
chr1 (54-100)||(25694403-25694449)
chr1 (54-100)||(27159358-27159404)
chr1 (54-100)||(31842795-31842841)
chr1 (54-100)||(39401966-39402012)
chr1 (54-100)||(44668093-44668139)
chr1 (54-100)||(47777481-47777527)
chr1 (54-95)||(9981731-9981772)
chr1 (4-51)||(1598415-1598461)
chr1 (54-100)||(1050972-1051018)
chr1 (4-66)||(3739838-3739900)
chr1 (6-88)||(12043616-12043697)
chr1 (44-102)||(19391948-19392006)
chr1 (54-100)||(26471065-26471111)
chr1 (6-64)||(29855084-29855142)
chr1 (54-100)||(34042780-34042826)
chr1 (54-100)||(47216699-47216745)
chr1 (42-91)||(5392218-5392267)
chr1 (8-77)||(11774536-11774605)
chr1 (67-100)||(47678371-47678404)
chr1 (6-66)||(571542-571601)
chr1 (46-90)||(12062635-12062679)
chr1 (5-81)||(33668748-33668824)
chr1 (64-100)||(39720779-39720815)
[»] chr6 (38 HSPs)
chr6 (1-103)||(6330112-6330214)
chr6 (1-100)||(2830335-2830434)
chr6 (1-100)||(8383000-8383099)
chr6 (1-100)||(11572176-11572275)
chr6 (1-100)||(26602323-26602422)
chr6 (1-100)||(8099530-8099629)
chr6 (1-100)||(13853624-13853723)
chr6 (1-100)||(33052825-33052924)
chr6 (1-100)||(9644696-9644795)
chr6 (1-100)||(9650713-9650812)
chr6 (1-100)||(35031032-35031131)
chr6 (1-100)||(6143554-6143653)
chr6 (5-100)||(6068566-6068661)
chr6 (1-100)||(8417824-8417923)
chr6 (8-100)||(13043758-13043850)
chr6 (1-84)||(28747165-28747248)
chr6 (4-92)||(6068974-6069062)
chr6 (5-100)||(22896471-22896557)
chr6 (1-70)||(17992018-17992087)
chr6 (4-95)||(14936491-14936582)
chr6 (4-88)||(3788048-3788133)
chr6 (5-85)||(7597012-7597092)
chr6 (54-104)||(8382965-8383015)
chr6 (54-103)||(2830419-2830468)
chr6 (44-100)||(3788111-3788167)
chr6 (54-100)||(6330199-6330245)
chr6 (43-81)||(6549902-6549940)
chr6 (54-100)||(8099614-8099660)
chr6 (54-100)||(9644780-9644826)
chr6 (54-100)||(9650797-9650843)
chr6 (54-100)||(11572145-11572191)
chr6 (54-100)||(13853593-13853639)
chr6 (54-100)||(26602407-26602453)
chr6 (56-100)||(35031001-35031045)
chr6 (54-100)||(6068650-6068696)
chr6 (54-100)||(8417793-8417839)
chr6 (56-89)||(12473651-12473684)
chr6 (56-100)||(17992074-17992118)
[»] scaffold0204 (2 HSPs)
scaffold0204 (1-100)||(23785-23884)
scaffold0204 (54-100)||(23869-23915)
[»] chr8 (50 HSPs)
chr8 (1-100)||(54643-54742)
chr8 (1-100)||(2890193-2890292)
chr8 (1-100)||(3304309-3304408)
chr8 (1-100)||(6552655-6552754)
chr8 (1-100)||(7785809-7785908)
chr8 (4-100)||(12343174-12343270)
chr8 (1-101)||(31654612-31654712)
chr8 (4-100)||(43199388-43199484)
chr8 (1-100)||(7805730-7805829)
chr8 (1-100)||(12763685-12763784)
chr8 (1-100)||(15888383-15888482)
chr8 (1-100)||(32114506-32114605)
chr8 (1-100)||(39571234-39571333)
chr8 (1-100)||(44498218-44498317)
chr8 (1-100)||(25601031-25601130)
chr8 (1-100)||(32211394-32211493)
chr8 (1-100)||(33289292-33289391)
chr8 (1-100)||(7012171-7012270)
chr8 (1-100)||(13578857-13578956)
chr8 (38-100)||(4245649-4245711)
chr8 (5-100)||(8587170-8587265)
chr8 (1-97)||(28463614-28463710)
chr8 (1-88)||(24692010-24692096)
chr8 (5-95)||(17006916-17007006)
chr8 (5-95)||(17570241-17570331)
chr8 (46-100)||(25601000-25601054)
chr8 (46-100)||(27422266-27422320)
chr8 (1-100)||(27422193-27422289)
chr8 (54-100)||(54612-54658)
chr8 (54-100)||(2890162-2890208)
chr8 (54-104)||(3304274-3304324)
chr8 (54-100)||(6552739-6552785)
chr8 (54-100)||(7785778-7785824)
chr8 (43-93)||(13246801-13246851)
chr8 (54-100)||(33289261-33289307)
chr8 (54-100)||(39571203-39571249)
chr8 (54-100)||(43199354-43199400)
chr8 (15-88)||(24203018-24203091)
chr8 (54-94)||(12343146-12343186)
chr8 (5-85)||(28999083-28999163)
chr8 (56-100)||(32211363-32211407)
chr8 (4-100)||(33057594-33057690)
chr8 (54-100)||(7012255-7012301)
chr8 (54-100)||(7805699-7805745)
chr8 (54-100)||(12763654-12763700)
chr8 (54-100)||(31654697-31654743)
chr8 (54-100)||(44498187-44498233)
chr8 (67-100)||(6899419-6899452)
chr8 (75-104)||(36366148-36366177)
chr8 (56-100)||(32114475-32114519)
[»] chr7 (38 HSPs)
chr7 (1-100)||(1565760-1565859)
chr7 (1-100)||(1738478-1738577)
chr7 (1-100)||(7240749-7240848)
chr7 (1-100)||(31319430-31319529)
chr7 (1-100)||(38063944-38064043)
chr7 (1-100)||(46840860-46840959)
chr7 (1-102)||(23314170-23314271)
chr7 (1-100)||(7482225-7482324)
chr7 (1-100)||(9268756-9268855)
chr7 (1-100)||(36583395-36583494)
chr7 (1-100)||(94349-94448)
chr7 (1-100)||(22285699-22285798)
chr7 (1-100)||(36016227-36016326)
chr7 (1-100)||(38441460-38441559)
chr7 (1-100)||(28536782-28536881)
chr7 (1-100)||(4790248-4790347)
chr7 (1-84)||(33418392-33418475)
chr7 (5-94)||(40840154-40840243)
chr7 (4-100)||(9575409-9575505)
chr7 (1-103)||(7269436-7269538)
chr7 (54-102)||(22285783-22285831)
chr7 (54-100)||(1738447-1738493)
chr7 (54-100)||(7240833-7240879)
chr7 (54-100)||(7482309-7482355)
chr7 (54-100)||(9268840-9268886)
chr7 (54-100)||(23314139-23314185)
chr7 (54-100)||(38441544-38441590)
chr7 (54-100)||(46840944-46840990)
chr7 (54-103)||(31319396-31319445)
chr7 (54-94)||(33418460-33418500)
chr7 (54-93)||(40840126-40840165)
chr7 (46-93)||(46877666-46877713)
chr7 (54-100)||(94318-94364)
chr7 (54-100)||(4790332-4790378)
chr7 (54-100)||(36583479-36583525)
chr7 (54-100)||(38063913-38063959)
chr7 (56-100)||(9575495-9575539)
chr7 (54-90)||(36016206-36016242)
[»] chr5 (45 HSPs)
chr5 (1-100)||(9395350-9395449)
chr5 (1-100)||(37148986-37149085)
chr5 (1-100)||(582989-583088)
chr5 (1-100)||(11795168-11795267)
chr5 (1-100)||(23359942-23360041)
chr5 (1-100)||(36563569-36563668)
chr5 (1-100)||(41989438-41989537)
chr5 (1-100)||(13033051-13033150)
chr5 (1-100)||(13103024-13103123)
chr5 (1-100)||(17025624-17025723)
chr5 (7-100)||(20848074-20848167)
chr5 (6-100)||(26350386-26350480)
chr5 (1-100)||(37641953-37642053)
chr5 (6-100)||(4443960-4444054)
chr5 (1-76)||(21575970-21576045)
chr5 (1-79)||(6126845-6126923)
chr5 (29-100)||(38361750-38361821)
chr5 (12-93)||(13539909-13539986)
chr5 (5-100)||(2629579-2629674)
chr5 (8-86)||(3549585-3549663)
chr5 (54-100)||(23360026-23360072)
chr5 (6-100)||(39290775-39290868)
chr5 (1-76)||(2366369-2366444)
chr5 (54-101)||(6126908-6126955)
chr5 (56-103)||(11574166-11574213)
chr5 (5-51)||(35904448-35904492)
chr5 (54-100)||(9395434-9395480)
chr5 (54-100)||(13103108-13103154)
chr5 (54-100)||(17025708-17025754)
chr5 (54-100)||(36563538-36563584)
chr5 (54-100)||(41989407-41989453)
chr5 (46-95)||(966224-966273)
chr5 (4-65)||(39030587-39030648)
chr5 (1-85)||(40138821-40138906)
chr5 (54-100)||(11795252-11795298)
chr5 (54-100)||(13033135-13033181)
chr5 (54-100)||(21576030-21576076)
chr5 (11-93)||(27080981-27081063)
chr5 (54-100)||(37148955-37149001)
chr5 (54-100)||(37642038-37642084)
chr5 (45-94)||(3549553-3549602)
chr5 (54-95)||(4444044-4444085)
chr5 (4-85)||(18167334-18167415)
chr5 (42-86)||(2366352-2366396)
chr5 (56-92)||(36595782-36595818)
[»] chr4 (58 HSPs)
chr4 (1-100)||(3372121-3372220)
chr4 (1-100)||(47833611-47833710)
chr4 (1-100)||(48336263-48336362)
chr4 (1-100)||(3904714-3904813)
chr4 (1-100)||(3992976-3993075)
chr4 (1-100)||(6121924-6122023)
chr4 (1-100)||(20538717-20538816)
chr4 (1-100)||(24704370-24704469)
chr4 (1-100)||(53337370-53337469)
chr4 (4-100)||(42797732-42797828)
chr4 (1-101)||(46797724-46797824)
chr4 (1-100)||(5986876-5986975)
chr4 (1-100)||(7579310-7579409)
chr4 (1-100)||(52756675-52756774)
chr4 (4-100)||(47838651-47838747)
chr4 (9-100)||(33551201-33551292)
chr4 (1-100)||(33621796-33621895)
chr4 (1-100)||(43900549-43900648)
chr4 (1-100)||(51894613-51894712)
chr4 (9-100)||(26231577-26231668)
chr4 (4-100)||(41469800-41469896)
chr4 (1-100)||(40913220-40913319)
chr4 (1-88)||(3422073-3422159)
chr4 (1-88)||(41615707-41615794)
chr4 (1-100)||(25855083-25855182)
chr4 (46-106)||(4780371-4780431)
chr4 (6-89)||(29845656-29845739)
chr4 (1-85)||(50430449-50430533)
chr4 (22-94)||(17236839-17236912)
chr4 (1-94)||(17344219-17344312)
chr4 (54-100)||(42797816-42797862)
chr4 (4-85)||(31013036-31013117)
chr4 (2-102)||(44900078-44900178)
chr4 (54-100)||(3422144-3422190)
chr4 (44-94)||(5986950-5987000)
chr4 (54-100)||(6121893-6121939)
chr4 (1-86)||(9876653-9876738)
chr4 (46-100)||(24704446-24704500)
chr4 (54-100)||(41469766-41469812)
chr4 (54-100)||(46797809-46797855)
chr4 (54-100)||(47833695-47833741)
chr4 (54-100)||(47838617-47838663)
chr4 (54-100)||(51894582-51894628)
chr4 (54-103)||(3372205-3372254)
chr4 (54-103)||(7579394-7579443)
chr4 (54-95)||(40913194-40913235)
chr4 (56-100)||(3904683-3904727)
chr4 (56-100)||(20538686-20538730)
chr4 (10-89)||(6924724-6924802)
chr4 (54-100)||(3993060-3993106)
chr4 (54-100)||(33621880-33621926)
chr4 (1-103)||(41594651-41594753)
chr4 (54-100)||(43900633-43900679)
chr4 (54-100)||(48336347-48336393)
chr4 (54-100)||(53337454-53337500)
chr4 (44-93)||(41615683-41615732)
chr4 (46-86)||(32822285-32822325)
chr4 (1-85)||(43095252-43095336)
[»] chr3 (60 HSPs)
chr3 (1-100)||(10297979-10298078)
chr3 (1-100)||(19557083-19557182)
chr3 (1-100)||(22721931-22722030)
chr3 (1-100)||(44785427-44785526)
chr3 (1-100)||(49823412-49823511)
chr3 (1-102)||(37508919-37509020)
chr3 (4-100)||(4238594-4238690)
chr3 (1-100)||(8817417-8817516)
chr3 (1-100)||(17653712-17653811)
chr3 (1-100)||(34080061-34080160)
chr3 (1-100)||(48340397-48340496)
chr3 (4-100)||(21295360-21295456)
chr3 (4-100)||(38964392-38964488)
chr3 (1-100)||(2787863-2787962)
chr3 (5-100)||(8437425-8437520)
chr3 (1-100)||(9111525-9111624)
chr3 (1-100)||(40691027-40691126)
chr3 (1-100)||(42507386-42507485)
chr3 (1-100)||(51406673-51406772)
chr3 (4-100)||(46208030-46208126)
chr3 (1-100)||(36095711-36095810)
chr3 (1-100)||(42170377-42170476)
chr3 (6-100)||(35513473-35513567)
chr3 (1-93)||(33942963-33943055)
chr3 (1-95)||(6013367-6013461)
chr3 (4-100)||(9213516-9213612)
chr3 (15-88)||(43323072-43323145)
chr3 (1-92)||(5323214-5323306)
chr3 (54-100)||(4238678-4238724)
chr3 (17-83)||(8951943-8952009)
chr3 (54-100)||(17653796-17653842)
chr3 (54-100)||(21295326-21295372)
chr3 (54-100)||(37509005-37509051)
chr3 (54-100)||(46208114-46208160)
chr3 (4-93)||(8092595-8092684)
chr3 (54-103)||(19557049-19557098)
chr3 (1-85)||(29285791-29285873)
chr3 (45-94)||(33128212-33128261)
chr3 (54-103)||(34080027-34080076)
chr3 (54-100)||(6013336-6013382)
chr3 (42-100)||(9213588-9213646)
chr3 (54-100)||(10298063-10298109)
chr3 (54-100)||(38964476-38964522)
chr3 (54-100)||(40690996-40691042)
chr3 (54-100)||(48340481-48340527)
chr3 (54-100)||(49823381-49823427)
chr3 (54-95)||(9111499-9111540)
chr3 (54-95)||(42507360-42507401)
chr3 (54-102)||(44785394-44785442)
chr3 (56-100)||(51406759-51406803)
chr3 (1-100)||(2131703-2131802)
chr3 (54-101)||(2787831-2787878)
chr3 (54-93)||(8817393-8817432)
chr3 (54-93)||(22722015-22722054)
chr3 (47-90)||(26001141-26001184)
chr3 (54-100)||(8437509-8437555)
chr3 (54-100)||(9027142-9027188)
chr3 (4-66)||(30443762-30443824)
chr3 (4-100)||(26019514-26019609)
chr3 (54-90)||(42170356-42170392)
[»] chr2 (53 HSPs)
chr2 (1-100)||(3055558-3055657)
chr2 (1-100)||(13197741-13197840)
chr2 (1-100)||(15896842-15896941)
chr2 (1-100)||(37990044-37990143)
chr2 (1-100)||(41478670-41478769)
chr2 (1-100)||(44397547-44397646)
chr2 (1-100)||(44398686-44398785)
chr2 (1-101)||(37666641-37666741)
chr2 (9-100)||(4683971-4684062)
chr2 (1-100)||(6648550-6648649)
chr2 (1-100)||(16044348-16044447)
chr2 (1-100)||(16243814-16243913)
chr2 (1-100)||(38917553-38917652)
chr2 (1-100)||(9047786-9047885)
chr2 (1-100)||(12337968-12338067)
chr2 (1-100)||(13344484-13344583)
chr2 (1-100)||(15372226-15372325)
chr2 (1-98)||(30099213-30099310)
chr2 (1-89)||(41492927-41493015)
chr2 (1-100)||(12170430-12170529)
chr2 (8-72)||(44804616-44804680)
chr2 (8-81)||(16734802-16734875)
chr2 (10-69)||(41453090-41453149)
chr2 (20-94)||(31150659-31150733)
chr2 (54-104)||(13197706-13197756)
chr2 (54-100)||(41492896-41492942)
chr2 (4-89)||(13724136-13724221)
chr2 (5-90)||(36688892-36688977)
chr2 (1-100)||(30852648-30852747)
chr2 (54-100)||(3055642-3055688)
chr2 (54-100)||(6648519-6648565)
chr2 (54-100)||(9047755-9047801)
chr2 (54-100)||(12337937-12337983)
chr2 (42-100)||(13724102-13724160)
chr2 (54-100)||(15372310-15372356)
chr2 (54-100)||(15896926-15896972)
chr2 (54-100)||(37990013-37990059)
chr2 (54-100)||(38917522-38917568)
chr2 (54-100)||(41478639-41478685)
chr2 (54-100)||(44398770-44398816)
chr2 (29-85)||(4553069-4553125)
chr2 (54-93)||(16243790-16243829)
chr2 (42-89)||(23227344-23227391)
chr2 (4-91)||(45294333-45294419)
chr2 (54-100)||(13344568-13344614)
chr2 (54-100)||(16044317-16044363)
chr2 (54-100)||(30099182-30099228)
chr2 (54-100)||(37666610-37666656)
chr2 (54-92)||(44397631-44397669)
chr2 (54-104)||(44804574-44804624)
chr2 (5-90)||(23986788-23986873)
chr2 (11-95)||(16561042-16561126)
chr2 (54-86)||(36089457-36089489)
[»] scaffold0464 (2 HSPs)
scaffold0464 (1-102)||(6162-6263)
scaffold0464 (54-100)||(6131-6177)
[»] scaffold1707 (1 HSPs)
scaffold1707 (1-100)||(1335-1434)
[»] scaffold0482 (2 HSPs)
scaffold0482 (1-100)||(12860-12959)
scaffold0482 (54-100)||(12944-12990)
[»] scaffold0650 (1 HSPs)
scaffold0650 (5-100)||(20-114)
[»] scaffold0415 (1 HSPs)
scaffold0415 (6-89)||(13761-13845)
[»] scaffold0011 (2 HSPs)
scaffold0011 (4-100)||(231337-231433)
scaffold0011 (54-100)||(231303-231349)
[»] scaffold0171 (1 HSPs)
scaffold0171 (4-95)||(12387-12478)


Alignment Details
Target: scaffold0009 (Bit Score: 100; Significance: 1e-49; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 49604 - 49505
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49604 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 49505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 44 - 100
Target Start/End: Original strand, 49579 - 49635
Alignment:
Q  44 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  49579 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 49635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 100; Significance: 1e-49; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 39401997 - 39402100
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39401997 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 39402096  T
Q  101 gtat 104  Q
    ||||    
T  39402097 gtat 39402100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 102 - 207
Target Start/End: Original strand, 31159241 - 31159346
Alignment:
Q  102 tatcatatgtcgtcccaattgccaaagcaatctttagtgtcatcattgattaattacggtgggcagaggttccataaaaatctgattctgaaatcacctg 201  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31159241 tatcataggtcgtcccaattcccaaagcaatctttagtgtcatcattgattaattacggtgggcagaggttccataaaaatctgattctgaaatcacctg 31159340  T
Q  202 cctaag 207  Q
    ||||||    
T  31159341 cctaag 31159346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 9981746 - 9981647
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9981746 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 9981647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 27159389 - 27159488
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27159389 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 27159488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 31842826 - 31842925
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31842826 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 31842925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 44668124 - 44668223
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44668124 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 44668223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 47216730 - 47216829
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47216730 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 47216829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 11796032 - 11795933
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11796032 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatgcattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 11795933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 12483659 - 12483758
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12483659 ttgggtcaacaaaagttgatgtatttagttcaaaattcagtctaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 12483758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 14984936 - 14984837
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  14984936 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagatagta 14984837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 23278032 - 23278131
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  23278032 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 23278131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 26471096 - 26471195
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26471096 ttggatcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 26471195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 34042795 - 34042696
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  34042795 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 34042696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 44955240 - 44955336
Alignment:
Q  4 ggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  44955240 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttttcttataaataggaccggaggtagta 44955336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 1050987 - 1050888
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1050987 ttgggtcaactaaagttgatgtatctagttaaaaattcagtccaaatgcattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 1050888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 47777512 - 47777611
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  47777512 ttgggtcaacaaaagttgatgtatctagttcaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgggggtagta 47777611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 47588368 - 47588467
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  47588368 ttgggtcaacaaaagttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccagaggtagta 47588467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 17556852 - 17556752
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaataca-ttcacttttgttgacctaaatttctcttataaataggaccggaggtagt 99  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||| |||||||||||||||||||| |||| |||    
T  17556852 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacatttaacttttgttgacctaactttctcttataaataggaccagagggagt 17556753  T
Q  100 a 100  Q
    |    
T  17556752 a 17556752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 25694418 - 25694331
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatagga 88  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||| |||||||||||||||||||||||    
T  25694418 ttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttattgatctaaatttctcttataaatagga 25694331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 47969794 - 47969700
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc-ttataaataggaccggag 94  Q
    |||| ||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  47969794 ttggatcaacaaaagttgatgtatctagttaaaaattcagtctaaatacatttacttttgttgacctaaatttctctttataaataggaccggag 47969700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 11897153 - 11897054
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||||||||||||||   |||||||||||||| || ||||||  |||||||||||||||| ||||||||||||||||||||||||| ||||    
T  11897153 ttgggtcaacaaaagttgatgtatccggttaaaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataggaccggagggagta 11897054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 16448139 - 16448238
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||||||| |||||| | ||| ||||||||||||| ||||||  ||||||||||||| || ||||||||||||||||||||||||| ||||    
T  16448139 ttgggtcaacaaaagtttatgtatctggttcaaaattcagtccagatacatcaacttttgttgacccaactttctcttataaataggaccggagggagta 16448238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 12213505 - 12213604
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||| ||||| |||||||||||||||||| || ||||||||| | ||||||||||||||  |||||||||||||| ||| ||||| ||||    
T  12213505 ttgggtcaacaaaaattgatttatttagttaaaaattcaatctaaatacattaatttttgttgacctaacattctcttataaataagactggagggagta 12213604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 37552240 - 37552139
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||| |  |||||| | ||||||||||||||||| ||||||  ||| ||||||||  || ||| ||||||||||||||||||||| ||||    
T  37552240 ttgggtcaacaaaaatgaatgtatctggttaaaaattcagtccagatacatgaactgttgttgactcaactttatcttataaataggaccggagggagta 37552141  T
Q  101 gt 102  Q
    ||    
T  37552140 gt 37552139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 11989876 - 11989796
Alignment:
Q  5 gtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 85  Q
    ||||| |||| ||||||||||| ||||||||||||||||||||| |||   ||||||||||| || |||||||||||||||    
T  11989876 gtcaataaaaattgatgtatttggttaaaaattcagtccaaatatattagtttttgttgacccaactttctcttataaata 11989796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 11897138 - 11897184
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||    
T  11897138 acttttgttgacccaaatttctcttataaataggaccggagggagta 11897184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 37552217 - 37552263
Alignment:
Q  46 atacattcacttttgttgacctaaatttctcttataaataggaccgg 92  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||    
T  37552217 atacattcatttttgttgacccaaatttctcttataaataggaccgg 37552263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 44 - 100
Target Start/End: Complemental strand, 12483684 - 12483628
Alignment:
Q  44 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  12483684 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 12483628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 44955252 - 44955212
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggag 94  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  44955252 acttttgttgacctaaaattctcttataaataggaccggag 44955212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 11796017 - 11796063
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  11796017 acttttgttgacccaaaattctcttataaataggaccggagggagta 11796063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 14984921 - 14984967
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  14984921 acttttgttgacccaaaattctcttataaataggaccggagggagta 14984967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 17556837 - 17556883
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| || ||||||||||||||||||||||||| ||||    
T  17556837 acttttgttgacccaagtttctcttataaataggaccggagggagta 17556883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 25694403 - 25694449
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  25694403 acttttgttgacccaaaattctcttataaataggaccggagggagta 25694449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 27159404 - 27159358
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  27159404 acttttgttgacccaaaattctcttataaataggaccggagggagta 27159358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 31842841 - 31842795
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  31842841 acttttgttgacccaaaattctcttataaataggaccggagggagta 31842795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 39402012 - 39401966
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  39402012 acttttgttgacccaaaattctcttataaataggaccggagggagta 39401966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 44668139 - 44668093
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  44668139 acttttgttgacccaaaattctcttataaataggaccggagggagta 44668093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 47777527 - 47777481
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  47777527 acttttgttgacccaaaattctcttataaataggaccggagggagta 47777481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 95
Target Start/End: Original strand, 9981731 - 9981772
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggagg 95  Q
    ||||||||||||| ||| ||||||||||||||||||||||||    
T  9981731 acttttgttgacccaaaattctcttataaataggaccggagg 9981772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 1598415 - 1598461
Alignment:
Q  4 ggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacat 51  Q
    ||||||||||| ||||||||| | ||||||||||||||||||||||||    
T  1598415 ggtcaacaaaaattgatgtatat-gttaaaaattcagtccaaatacat 1598461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 1050972 - 1051018
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||| ||||||| ||| |||||||||||||||||||||||| ||||    
T  1050972 actttagttgacccaaaattctcttataaataggaccggagggagta 1051018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 3739900 - 3739838
Alignment:
Q  4 ggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacc 66  Q
    |||||||||||||| |||||||| ||||||||||    ||||||||||| ||||| |||||||    
T  3739900 ggtcaacaaaagttaatgtatttggttaaaaatttgtaccaaatacattaactttcgttgacc 3739838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 88
Target Start/End: Complemental strand, 12043697 - 12043616
Alignment:
Q  6 tcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatagga 88  Q
    ||||||||| || |||||| | |||||||||| | || ||||||||  |||||||||||| ||||| ||| ||||||||||||    
T  12043697 tcaacaaaaattaatgtatcttgttaaaaattgaatc-aaatacatcaacttttgttgacttaaatatcttttataaatagga 12043616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 102
Target Start/End: Original strand, 19391948 - 19392006
Alignment:
Q  44 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtagt 102  Q
    ||||||||| ||||||||| ||  || ||||||||||| ||||||| ||||||||||||    
T  19391948 aaatacattaacttttgttcactcaactttctcttatatataggactggaggtagtagt 19392006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 26471111 - 26471065
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||| | ||| |||||||||||||||||||||||| ||||    
T  26471111 acttttgttgatccaaaattctcttataaataggaccggagggagta 26471065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 29855084 - 29855142
Alignment:
Q  6 tcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttga 64  Q
    ||||||||||||||||||||| ||||||||||    | ||||||||| |||||||||||    
T  29855084 tcaacaaaagttgatgtatttggttaaaaatttgtacgaaatacattaacttttgttga 29855142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 34042780 - 34042826
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| ||||||||||||||| |||||||| ||||    
T  34042780 acttttgttgacccaaaattctcttataaatagaaccggagggagta 34042826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 47216745 - 47216699
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| ||||||||||||||| |||||||| ||||    
T  47216745 acttttgttgacccaaaattctcttataaatagtaccggagggagta 47216699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 91
Target Start/End: Original strand, 5392218 - 5392267
Alignment:
Q  42 ccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 91  Q
    ||||||||||  |||||| ||||||||||||||||||||| || ||||||    
T  5392218 ccaaatacatcaacttttattgacctaaatttctcttatatattggaccg 5392267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 77
Target Start/End: Complemental strand, 11774605 - 11774536
Alignment:
Q  8 aacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctct 77  Q
    |||||||||||| |||| ||||| ||||||||||  || |||||  | |||||||||||||| |||||||    
T  11774605 aacaaaagttgacgtatctagttcaaaattcagtttaattacatcaatttttgttgacctaactttctct 11774536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 100
Target Start/End: Original strand, 47678371 - 47678404
Alignment:
Q  67 taaatttctcttataaataggaccggaggtagta 100  Q
    ||||||| ||||||||||||||||||||||||||    
T  47678371 taaatttttcttataaataggaccggaggtagta 47678404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 66
Target Start/End: Complemental strand, 571601 - 571542
Alignment:
Q  6 tcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacc 66  Q
    |||||||||||| |||||  ||||| ||||||||||| ||||||| | |||||||||||||    
T  571601 tcaacaaaagttaatgtacctagttcaaaattcagtctaaataca-taacttttgttgacc 571542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 90
Target Start/End: Original strand, 12062635 - 12062679
Alignment:
Q  46 atacattcacttttgttgacctaaatttctcttataaataggacc 90  Q
    ||||||| | |||||||||  ||||||||||||||||||||||||    
T  12062635 atacattaatttttgttgatttaaatttctcttataaataggacc 12062679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 81
Target Start/End: Complemental strand, 33668824 - 33668748
Alignment:
Q  5 gtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 81  Q
    ||||||||||  | ||| |||| ||||||||||||||| | ||||||| | |||||||| || || |||||||||||    
T  33668824 gtcaacaaaaagtaatgcatttggttaaaaattcagtctagatacattgagttttgttgtcccaattttctcttata 33668748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 100
Target Start/End: Original strand, 39720779 - 39720815
Alignment:
Q  64 acctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||| | ||||||||||||||||||||||||||||    
T  39720779 acctaattgtctcttataaataggaccggaggtagta 39720815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 99; Significance: 5e-49; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 6330214 - 6330112
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6330214 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 6330115  T
Q  101 gta 103  Q
    |||    
T  6330114 gta 6330112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 2830434 - 2830335
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2830434 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 2830335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 8383000 - 8383099
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8383000 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 8383099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 11572176 - 11572275
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11572176 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 11572275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 26602422 - 26602323
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26602422 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 26602323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 8099629 - 8099530
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8099629 ttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 8099530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 13853624 - 13853723
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  13853624 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgaaggtagta 13853723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 33052825 - 33052924
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33052825 ttgggtcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 33052924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 9644795 - 9644696
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  9644795 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgacctaaatttctcttataaataggaccggaggtagta 9644696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 9650812 - 9650713
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  9650812 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgacctaaatttctcttataaataggaccggaggtagta 9650713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 35031032 - 35031131
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  35031032 ttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttttcttataaataggaccggaggtagta 35031131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 6143653 - 6143554
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  6143653 ttgggacaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaataggatcggaggtagta 6143554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 6068661 - 6068566
Alignment:
Q  5 gtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  6068661 gtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttattgacctaaatttttcttataaataggaccggaggtagta 6068566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 8417824 - 8417923
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||    
T  8417824 ttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaataagaccagagggagta 8417923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 13043850 - 13043758
Alignment:
Q  8 aacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||||||| |||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  13043850 aacaaaagttgatgtatctagttaaaaattcaattcaaatacattcatttttgttgacctaaatttctcttataaatagaaccggaggtagta 13043758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 28747165 - 28747248
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 84  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  28747165 ttgggtcaacaaaagttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaat 28747248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 4 - 92
Target Start/End: Original strand, 6068974 - 6069062
Alignment:
Q  4 ggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgg 92  Q
    |||||||||||| ||| ||||  ||||||||||| || ||||||||||| |||||||||||||||||| ||| ||||||||||||||||    
T  6068974 ggtcaacaaaagatgaagtatcgagttaaaaatttagaccaaatacattaacttttgttgacctaaatatcttttataaataggaccgg 6069062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 22896557 - 22896471
Alignment:
Q  5 gtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||| ||||||||||||||||||||||||         |||||||||||| |||||||||||||||||||||||| ||||    
T  22896557 gtcaacaaaagttgatgtatctagttaaaaattcagtccaaatac---------tgttgacctaaacttctcttataaataggaccggagggagta 22896471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 17992087 - 17992018
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaa 70  Q
    |||||||||||||| | ||||||| |||||||||||||| ||||||||||||||||||| ||||||||||    
T  17992087 ttgggtcaacaaaaatcgatgtatctagttaaaaattcaatccaaatacattcacttttattgacctaaa 17992018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 4 - 95
Target Start/End: Original strand, 14936491 - 14936582
Alignment:
Q  4 ggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 95  Q
    |||||||||||| |||||||| ||||||| ||||   |||||||||||  ||| ||||||||| |||| |||||||||||||||||| ||||    
T  14936491 ggtcaacaaaaggtgatgtatctagttaagaatttgttccaaatacatcaactattgttgacccaaatatctcttataaataggaccagagg 14936582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 3788133 - 3788048
Alignment:
Q  4 ggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttg-ttgacctaaatttctcttataaatagga 88  Q
    ||||||||||||||||||||||||||||| ||||||||||| || ||   | ||||| |||||| || ||||||||||||||||||    
T  3788133 ggtcaacaaaagttgatgtatttagttaacaattcagtccacatccaacaaattttgattgacccaactttctcttataaatagga 3788048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 7597012 - 7597092
Alignment:
Q  5 gtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 85  Q
    ||||| ||||||||||||||||||||||||||||||| |  ||||||  ||||||||| ||  || |||||||||||||||    
T  7597012 gtcaataaaagttgatgtatttagttaaaaattcagttcggatacatcaacttttgttaacacaactttctcttataaata 7597092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 54 - 104
Target Start/End: Complemental strand, 8383015 - 8382965
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagtagtat 104  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||||||    
T  8383015 acttttgttgacccaaaattctcttataaataggaccggagggagtagtat 8382965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 103
Target Start/End: Original strand, 2830419 - 2830468
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagtagta 103  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  2830419 acttttgttgacccaaaattctcttataaataggaccggagggagtagta 2830468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 44 - 100
Target Start/End: Original strand, 3788111 - 3788167
Alignment:
Q  44 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||  |||||||||||||||||||| ||||||||||| ||||||||| ||||    
T  3788111 aaatacatcaacttttgttgacctaaatttatcttataaataagaccggagggagta 3788167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 6330199 - 6330245
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  6330199 acttttgttgacccaaaattctcttataaataggaccggagggagta 6330245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 6549940 - 6549902
Alignment:
Q  43 caaatacattcacttttgttgacctaaatttctcttata 81  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  6549940 caaatacattaacttttgttgacctaaatttctcttata 6549902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 8099614 - 8099660
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  8099614 acttttgttgacccaaaattctcttataaataggaccggagggagta 8099660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 9644780 - 9644826
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  9644780 acttttgttgacccaaaattctcttataaataggaccggagggagta 9644826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 9650797 - 9650843
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  9650797 acttttgttgacccaaaattctcttataaataggaccggagggagta 9650843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 11572191 - 11572145
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  11572191 acttttgttgacccaaaattctcttataaataggaccggagggagta 11572145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 13853639 - 13853593
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  13853639 acttttgttgacccaaaattctcttataaataggaccggagggagta 13853593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 26602407 - 26602453
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  26602407 acttttgttgacccaaaattctcttataaataggaccggagggagta 26602453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 100
Target Start/End: Complemental strand, 35031045 - 35031001
Alignment:
Q  56 ttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  35031045 ttttgttgacccaaaattctcttataaataggaccggaggaagta 35031001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 6068650 - 6068696
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||  ||| |||||||||||||||||||||||| ||||    
T  6068650 acttttgttgactcaaaattctcttataaataggaccggagggagta 6068696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 8417839 - 8417793
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| |||||||||||||||||||| ||| ||||    
T  8417839 acttttgttgacccaaaattctcttataaataggaccgaagggagta 8417793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 89
Target Start/End: Complemental strand, 12473684 - 12473651
Alignment:
Q  56 ttttgttgacctaaatttctcttataaataggac 89  Q
    |||| |||||||||||||||||||||||||||||    
T  12473684 ttttattgacctaaatttctcttataaataggac 12473651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 100
Target Start/End: Original strand, 17992074 - 17992118
Alignment:
Q  56 ttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||| ||| |||||||||||||||||||| ||| ||||    
T  17992074 ttttgttgacccaaaattctcttataaataggaccgaagggagta 17992118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 96; Significance: 3e-47; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 23884 - 23785
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23884 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 23785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 23869 - 23915
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| || ||||||||||||||||||||| ||||    
T  23869 acttttgttgacccaaaattttcttataaataggaccggagggagta 23915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 96; Significance: 3e-47; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 54643 - 54742
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54643 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 54742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 2890193 - 2890292
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2890193 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 2890292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 3304309 - 3304408
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3304309 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 3304408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 6552754 - 6552655
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6552754 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 6552655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 7785809 - 7785908
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7785809 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 7785908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 12343174 - 12343270
Alignment:
Q  4 ggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12343174 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 12343270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 31654712 - 31654612
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  31654712 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 31654613  T
Q  101 g 101  Q
    |    
T  31654612 g 31654612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 43199388 - 43199484
Alignment:
Q  4 ggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43199388 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 43199484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 7805730 - 7805829
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7805730 ttgggtcagcaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 7805829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 12763685 - 12763784
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  12763685 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 12763784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 15888383 - 15888482
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15888383 ttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 15888482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 32114506 - 32114605
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32114506 ttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 32114605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 39571234 - 39571333
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  39571234 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaataggaccggaggtagta 39571333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 44498218 - 44498317
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44498218 ttgggtcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 44498317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 25601031 - 25601130
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  25601031 ttgggtcaacaaaagttaatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggatcggaggtagta 25601130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 32211394 - 32211493
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  32211394 ttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 32211493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 33289292 - 33289391
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  33289292 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttatgttgatctaaatttctcttataaataggaccggaggtagta 33289391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 7012270 - 7012171
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  7012270 ttggatcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgatctaaatttctcttataaataggaccggaggtagta 7012171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 13578956 - 13578857
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||    
T  13578956 ttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttattgacctaaatttctcttataaatagaactggaggtagta 13578857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 38 - 100
Target Start/End: Original strand, 4245649 - 4245711
Alignment:
Q  38 cagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4245649 cagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 4245711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 8587265 - 8587170
Alignment:
Q  5 gtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||| |||||||||||||| |||||||||||| |||| ||||||||  ||||||||||||| || ||||||||||||||||||||||||| ||||    
T  8587265 gtcaataaaagttgatgtatctagttaaaaatttagtcaaaatacatcaacttttgttgaccaaactttctcttataaataggaccggagggagta 8587170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 28463710 - 28463614
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggta 97  Q
    |||||||| | ||||||||| ||| | ||| ||||||||||||||||||||  ||||||||||||| || |||||||||||||||||||||||||||    
T  28463710 ttgggtcaccgaaagttgatatatctggttcaaaattcagtccaaatacatcaacttttgttgacccaactttctcttataaataggaccggaggta 28463614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 24692010 - 24692096
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatagga 88  Q
    |||||||||||||||||||| ||| | ||||||| |||||| || ||||||  |||||||||||||||| ||| ||||||||||||||    
T  24692010 ttgggtcaacaaaagttgatatatctggttaaaa-ttcagttcagatacatcaacttttgttgacctaactttttcttataaatagga 24692096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 17007006 - 17006916
Alignment:
Q  5 gtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 95  Q
    ||||| |||||||||||||| |  |||| ||||||||||| || |||  ||||||||||||| || |||||||||||||||||| ||||||    
T  17007006 gtcaataaaagttgatgtatctgattaacaattcagtccagatccatcaacttttgttgacccaactttctcttataaataggatcggagg 17006916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 17570241 - 17570331
Alignment:
Q  5 gtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 95  Q
    ||||| |||||||||||||| |  |||| ||||||||||| || |||  ||||||||||||| || |||||||||||||||||| ||||||    
T  17570241 gtcaataaaagttgatgtatctgattaacaattcagtccagatccatcaacttttgttgacccaactttctcttataaataggatcggagg 17570331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 100
Target Start/End: Complemental strand, 25601054 - 25601000
Alignment:
Q  46 atacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||| ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  25601054 atacattaacttttgttgacccaaaattctcttataaataggaccggagggagta 25601000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 100
Target Start/End: Original strand, 27422266 - 27422320
Alignment:
Q  46 atacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||| ||| ||||    
T  27422266 atacattcatttttgttgacccaaatttctcttataaataggaccgaagggagta 27422320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 27422289 - 27422193
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||| |  |||||| | ||||||||||||||||||||||||  |   ||||||||  || ||| ||||||||||||||||||||| ||||    
T  27422289 ttgggtcaacaaaaatgaatgtatctggttaaaaattcagtccaaatacatgaa---ttgttgactcaactttatcttataaataggaccggaggaagta 27422193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 54658 - 54612
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  54658 acttttgttgacccaaaattctcttataaataggaccggagggagta 54612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 2890208 - 2890162
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  2890208 acttttgttgacccaaaattctcttataaataggaccggagggagta 2890162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 104
Target Start/End: Complemental strand, 3304324 - 3304274
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagtagtat 104  Q
    ||||||||||||| ||| || ||||||||||||||||||||| ||||||||    
T  3304324 acttttgttgacccaaaattttcttataaataggaccggagggagtagtat 3304274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 6552739 - 6552785
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  6552739 acttttgttgacccaaaattctcttataaataggaccggagggagta 6552785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 7785824 - 7785778
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  7785824 acttttgttgacccaaaattctcttataaataggaccggagggagta 7785778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 43 - 93
Target Start/End: Complemental strand, 13246851 - 13246801
Alignment:
Q  43 caaatacattcacttttgttgacctaaatttctcttataaataggaccgga 93  Q
    |||||||||||| ||||||||| | ||||||||||||||||||||| ||||    
T  13246851 caaatacattcatttttgttgatccaaatttctcttataaataggatcgga 13246801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 33289307 - 33289261
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  33289307 acttttgttgacccaaaattctcttataaataggaccggagggagta 33289261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 39571249 - 39571203
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  39571249 acttttgttgacccaaaattctcttataaataggaccggagggagta 39571203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 43199400 - 43199354
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  43199400 acttttgttgaccaaaaattctcttataaataggaccggagggagta 43199354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 24203018 - 24203091
Alignment:
Q  15 gttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatagga 88  Q
    |||||||||||| ||| |||||| |   |||||| || ||||||| ||||| ||||||||||||||||||||||    
T  24203018 gttgatgtatttggttcaaaatttaaatcaaatatatccacttttattgacataaatttctcttataaatagga 24203091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 12343186 - 12343146
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggag 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||    
T  12343186 acttttgttgaccaaaaattctcttataaataggaccggag 12343146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 28999083 - 28999163
Alignment:
Q  5 gtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 85  Q
    ||||| ||||||| | |||| ||||||||||||||||| | ||||||  | ||||||||||| || ||||| |||||||||    
T  28999083 gtcaataaaagtttacgtatgtagttaaaaattcagtctagatacatcaatttttgttgaccaaactttcttttataaata 28999163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 100
Target Start/End: Complemental strand, 32211407 - 32211363
Alignment:
Q  56 ttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  32211407 ttttgttgacccaaaattctcttataaataggaccggagggagta 32211363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 33057690 - 33057594
Alignment:
Q  4 ggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||| ||||||||| | ||||||| |||| |||  |||||   | ||||||||| | || ||| ||||||||||||||||||||| ||||    
T  33057690 ggtcaacaaaaattgatgtatctggttaaaatttcactccggatacaacaatttttgttgatccaactttgtcttataaataggaccggagggagta 33057594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 7012255 - 7012301
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||| | ||| |||||||||||||||||||||||| ||||    
T  7012255 acttttgttgatccaaaattctcttataaataggaccggaggaagta 7012301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 7805745 - 7805699
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||| ||||| ||| |||||||||||||||||||||||| ||||    
T  7805745 acttttgctgacccaaaattctcttataaataggaccggagggagta 7805699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 12763700 - 12763654
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| || ||||||||||||||||||||| ||||    
T  12763700 acttttgttgacccaaaattatcttataaataggaccggagggagta 12763654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 31654697 - 31654743
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  31654697 acttttgttgacccaaaattcttttataaataggaccggaggaagta 31654743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 44498233 - 44498187
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||| |||||| ||| |||||||||||||||||||||||| ||||    
T  44498233 acttttattgacccaaaattctcttataaataggaccggagggagta 44498187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 100
Target Start/End: Complemental strand, 6899452 - 6899419
Alignment:
Q  67 taaatttctcttataaataggaccggaggtagta 100  Q
    ||||||| ||||||||||||||||||||||||||    
T  6899452 taaatttttcttataaataggaccggaggtagta 6899419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 104
Target Start/End: Original strand, 36366148 - 36366177
Alignment:
Q  75 tcttataaataggaccggaggtagtagtat 104  Q
    ||||||||||||||||||||||||||||||    
T  36366148 tcttataaataggaccggaggtagtagtat 36366177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 100
Target Start/End: Complemental strand, 32114519 - 32114475
Alignment:
Q  56 ttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||| ||| || ||||||||||||||||||||| ||||    
T  32114519 ttttgttgacccaaaattttcttataaataggaccggagggagta 32114475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 96; Significance: 3e-47; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 1565760 - 1565859
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1565760 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 1565859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 1738478 - 1738577
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1738478 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 1738577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 7240848 - 7240749
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7240848 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 7240749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 31319430 - 31319529
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31319430 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 31319529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 38063944 - 38064043
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38063944 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 38064043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 46840959 - 46840860
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46840959 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 46840860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 23314170 - 23314271
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23314170 ttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 23314269  T
Q  101 gt 102  Q
    ||    
T  23314270 gt 23314271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 7482324 - 7482225
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7482324 ttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 7482225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 9268855 - 9268756
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  9268855 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccagaggtagta 9268756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 36583494 - 36583395
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36583494 ttgggtcaacaaaagttgatgtatctagttaaaaattaagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 36583395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 94349 - 94448
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  94349 ttgggtcaacaaaagttgatgtatctagttaaaaattctgtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagatagta 94448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 22285798 - 22285699
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22285798 ttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 22285699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 36016227 - 36016326
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  36016227 ttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 36016326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 38441559 - 38441460
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  38441559 ttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacataaatttctcttataaataggaccggaggtagta 38441460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 28536782 - 28536881
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||| |||| |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28536782 ttggatcaataaaagttgatgtatctagttaaaaattcattccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 28536881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 4790347 - 4790248
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||| |||||||||||||| |||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  4790347 ttgggtcaataaaagttgatgtatctagttaaaaatttagtccaaatacattcatttttgttgacctaaatttttcttataaataggaccggaggtagta 4790248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 33418475 - 33418392
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 84  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  33418475 ttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaaaaat 33418392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 40840154 - 40840243
Alignment:
Q  5 gtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 94  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||| || ||| |||||||| |||||||||||||||    
T  40840154 gtcaacaaaagttgatgtacttagttaaaaattcagtccaaatacattgatttttgttaacttaactttctcttctaaataggaccggag 40840243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 9575505 - 9575409
Alignment:
Q  4 ggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||| ||||||||| ||||||||||||||||| |||||| || ||||||||||||| || ||||||||| |||||||||| |||| ||||    
T  9575505 ggtcaacaaaacttgatgtatctagttaaaaattcagtctaaatacgttaacttttgttgacccaactttctcttacaaataggaccagagggagta 9575409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 7269436 - 7269538
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||| |||||||||||||| || | ||||||||||||||  | ||||||  | ||||||||||| || ||| ||||||||||| ||||||||| ||||    
T  7269436 ttgggttaacaaaagttgatgcatctggttaaaaattcagtttagatacatcaatttttgttgacccaactttttcttataaataagaccggagggagta 7269535  T
Q  101 gta 103  Q
    |||    
T  7269536 gta 7269538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 54 - 102
Target Start/End: Original strand, 22285783 - 22285831
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagtagt 102  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  22285783 acttttgttgacccaaaattctcttataaataggaccggagggagtagt 22285831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 1738493 - 1738447
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  1738493 acttttgttgacccaaaattctcttataaataggaccggagggagta 1738447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 7240833 - 7240879
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  7240833 acttttgttgacccaaaattctcttataaataggaccggagggagta 7240879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 7482309 - 7482355
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  7482309 acttttgttgacccaaaattctcttataaataggaccggagggagta 7482355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 9268840 - 9268886
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  9268840 acttttgttgacccaaaattctcttataaataggaccggagggagta 9268886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 23314185 - 23314139
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  23314185 acttttgttgacccaaaattctcttataaataggaccggagggagta 23314139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 38441544 - 38441590
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  38441544 acttttgttgacccaaaattctcttataaataggaccggaggaagta 38441590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 46840944 - 46840990
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  46840944 acttttgttgacccaaaattctcttataaataggaccggagggagta 46840990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 103
Target Start/End: Complemental strand, 31319445 - 31319396
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagtagta 103  Q
    ||||||||||||| ||| ||||||||||||||| |||||||| |||||||    
T  31319445 acttttgttgacccaaaattctcttataaatagaaccggagggagtagta 31319396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 94
Target Start/End: Original strand, 33418460 - 33418500
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggag 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||    
T  33418460 acttttgttgacccaaaattctcttataaataggaccggag 33418500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 93
Target Start/End: Complemental strand, 40840165 - 40840126
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccgga 93  Q
    ||||||||||||  ||||||||||||||||||||||||||    
T  40840165 acttttgttgacaaaaatttctcttataaataggaccgga 40840126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 93
Target Start/End: Original strand, 46877666 - 46877713
Alignment:
Q  46 atacattcacttttgttgacctaaatttctcttataaataggaccgga 93  Q
    ||||||| ||||||||||||| || ||||||||||| |||||||||||    
T  46877666 atacattaacttttgttgacccaactttctcttatatataggaccgga 46877713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 94364 - 94318
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| ||||||||||||||||| |||||| ||||    
T  94364 acttttgttgacccaaaattctcttataaataggatcggagggagta 94318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 4790332 - 4790378
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||| |||||| ||| |||||||||||||||||||||||| ||||    
T  4790332 acttttattgacccaaaattctcttataaataggaccggaggaagta 4790378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 36583479 - 36583525
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| ||||||||||||||||| |||||| ||||    
T  36583479 acttttgttgacccaaaattctcttataaataggatcggagggagta 36583525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 38063959 - 38063913
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| ||||||||||||||||||| |||| ||||    
T  38063959 acttttgttgacccaaaattctcttataaataggaccagagggagta 38063913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 100
Target Start/End: Original strand, 9575495 - 9575539
Alignment:
Q  56 ttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||| || ||||||||||||||||||||| ||| ||||    
T  9575495 ttttgttgaccaaactttctcttataaataggaccgaagggagta 9575539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 90
Target Start/End: Complemental strand, 36016242 - 36016206
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggacc 90  Q
    ||||||||||||| ||| |||||||||||||||||||    
T  36016242 acttttgttgacccaaaattctcttataaataggacc 36016206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 96; Significance: 3e-47; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 9395449 - 9395350
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9395449 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 9395350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 37148986 - 37149085
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37148986 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 37149085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 583088 - 582989
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  583088 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttatgttgacctaaatttctcttataaataggaccggaggtagta 582989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 11795267 - 11795168
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  11795267 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggatcggaggtagta 11795168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 23360041 - 23359942
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  23360041 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccagaggtagta 23359942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 36563569 - 36563668
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  36563569 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggatcggaggtagta 36563668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 41989438 - 41989537
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  41989438 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttacaaataggaccggaggtagta 41989537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 13033150 - 13033051
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  13033150 ttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggaagta 13033051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 13103123 - 13103024
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  13103123 ttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggaagta 13103024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 17025723 - 17025624
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  17025723 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtttaaatacattcacttttgtggacctaaatttctcttataaataggaccggaggtagta 17025624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 7 - 100
Target Start/End: Complemental strand, 20848167 - 20848074
Alignment:
Q  7 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  20848167 caacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttattgacctaaatttctcttataaataggaccggaggtagta 20848074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 6 - 100
Target Start/End: Original strand, 26350386 - 26350480
Alignment:
Q  6 tcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  26350386 tcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggatcggagggagta 26350480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 37642053 - 37641953
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcac-ttttgttgacctaaatttctcttataaataggaccggaggtagt 99  Q
    ||||||||| |||||||||||||| ||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  37642053 ttgggtcaataaaagttgatgtatctagttaaaaattcagtccacatacattcactttttattgacctaaatttctcttataaataggaccggaggtagt 37641954  T
Q  100 a 100  Q
    |    
T  37641953 a 37641953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 6 - 100
Target Start/End: Complemental strand, 4444054 - 4443960
Alignment:
Q  6 tcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  4444054 tcaacaaaagttgatgtatctatttaaaaattcagtctaaatacattcacttttgttgacctaaatttctcttataaataggaccgaaggaagta 4443960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 21576045 - 21575970
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 76  Q
    |||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21576045 ttggatcaacaaaagttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 21575970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 6126923 - 6126845
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctctta 79  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||||| ||||||||||||||    
T  6126923 ttgggtcaacaaaagttgatgtatctagttaaaaatttagtccaaatacattcatttttgttgatctaaatttctctta 6126845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 38361750 - 38361821
Alignment:
Q  29 ttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||| ||||    
T  38361750 ttaaaaattcagtccaaatacattcacttttattgacctaaatttatcttataaataggatcggaggaagta 38361821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 12 - 93
Target Start/End: Original strand, 13539909 - 13539986
Alignment:
Q  12 aaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgga 93  Q
    ||||||||||||| ||||||||||||||||| ||||  |||    |||||||||||||||||||||||||||||||||||||    
T  13539909 aaagttgatgtatctagttaaaaattcagtctaaatttatt----tttgttgacctaaatttctcttataaataggaccgga 13539986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 2629579 - 2629674
Alignment:
Q  5 gtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||| |||| ||||||||| |||||||||| | ||  || ||||||| |||||||||||||||||| | ||||||||| | ||||||||| ||||    
T  2629579 gtcaataaaatttgatgtatatagttaaaaaattagatcagatacattaacttttgttgacctaaatatttcttataaacaagaccggaggaagta 2629674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 3549585 - 3549663
Alignment:
Q  8 aacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatag 86  Q
    ||||||||||||||||||  |||||||||| || ||| ||||||| | ||||||||||  |||| ||||||||||||||    
T  3549585 aacaaaagttgatgtattcggttaaaaatttagaccagatacattaatttttgttgactaaaatatctcttataaatag 3549663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 23360026 - 23360072
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  23360026 acttttgttgacccaaaattctcttataaataggaccggaggtagta 23360072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 100
Target Start/End: Complemental strand, 39290868 - 39290775
Alignment:
Q  6 tcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||| |||||| || ||||||||| | |||||||||||  | |||||||||||| |  ||||||||| |||||||||||||| ||||    
T  39290868 tcaacaaaagttaatgtatctaattaaaaatttaatccaaatacatcaatttttgttgacctgatattctcttat-aataggaccggagggagta 39290775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 2366369 - 2366444
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 76  Q
    |||||||||||| |||| |||||||| ||||||| ||||||||||||||||  |||||| || ||| || ||||||    
T  2366369 ttgggtcaacaagagttcatgtatttggttaaaatttcagtccaaatacatcaacttttattaaccaaactttctc 2366444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 101
Target Start/End: Original strand, 6126908 - 6126955
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagtag 101  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  6126908 acttttgttgacccaaaattctcttataaataggaccggagggagtag 6126955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 103
Target Start/End: Original strand, 11574166 - 11574213
Alignment:
Q  56 ttttgttgacctaaatttctcttataaataggaccggaggtagtagta 103  Q
    |||||||||||||||| ||||||||||||||||||||||  |||||||    
T  11574166 ttttgttgacctaaatgtctcttataaataggaccggagagagtagta 11574213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 35904492 - 35904448
Alignment:
Q  5 gtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacat 51  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||    
T  35904492 gtcaacaaaagt--atgtatttagttaaaaattcagtccaaatacat 35904448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 9395434 - 9395480
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  9395434 acttttgttgacccaaaattctcttataaataggaccggagggagta 9395480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 13103108 - 13103154
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  13103108 acttttgttgacccaaaattctcttataaataggaccggagggagta 13103154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 17025708 - 17025754
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  17025708 acttttgttgacccaaaattctcttataaataggaccggagggagta 17025754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 36563584 - 36563538
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  36563584 acttttgttgacccaaaattctcttataaataggaccggagggagta 36563538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 41989453 - 41989407
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  41989453 acttttgttgacccaaaattctcttataaataggaccggagggagta 41989407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 95
Target Start/End: Original strand, 966224 - 966273
Alignment:
Q  46 atacattcacttttgttgacctaaatttctcttataaataggaccggagg 95  Q
    ||||||||| ||||||||| | |||||||||||||||||||||| |||||    
T  966224 atacattcatttttgttgatccaaatttctcttataaataggactggagg 966273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 39030587 - 39030648
Alignment:
Q  4 ggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgac 65  Q
    |||||||||||||| |||||||| ||||||||||    ||||||||||| ||||||||||||    
T  39030587 ggtcaacaaaagttaatgtatttggttaaaaatttgtaccaaatacattaacttttgttgac 39030648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 40138821 - 40138906
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgac-ctaaatttctcttataaata 85  Q
    |||||| || ||||||||||||||||  ||||||||||||| |||||| ||| | |||||||||| | |  |||||||||||||||    
T  40138821 ttgggttaataaaagttgatgtatttgattaaaaattcagttcaaatatatttatttttgttgactcaacttttctcttataaata 40138906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 11795252 - 11795298
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| |||||||||||||||||| ||||| ||||    
T  11795252 acttttgttgacccaaaattctcttataaataggactggagggagta 11795298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 13033135 - 13033181
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| ||||||||||||||||| |||||| ||||    
T  13033135 acttttgttgacccaaaattctcttataaataggatcggagggagta 13033181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 21576030 - 21576076
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||| | ||| |||||||||||||||||||||||| ||||    
T  21576030 acttttgttgatccaaaattctcttataaataggaccggagggagta 21576076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 27080981 - 27081063
Alignment:
Q  11 aaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgga 93  Q
    ||||| |||| |||||  ||||||||| ||   ||||||||  |||||||||||||||||| |||||| ||||||||| ||||    
T  27080981 aaaagatgatttatttgattaaaaatttagattaaatacatcaacttttgttgacctaaatgtctcttgtaaataggatcgga 27081063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 37149001 - 37148955
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  37149001 acttttgttgacccaaaattctattataaataggaccggagggagta 37148955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 37642038 - 37642084
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||| |||||| ||| |||||||||||||||||||||||| ||||    
T  37642038 acttttattgacccaaaattctcttataaataggaccggagggagta 37642084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 94
Target Start/End: Complemental strand, 3549602 - 3549553
Alignment:
Q  45 aatacattcacttttgttgacctaaatttctcttataaataggaccggag 94  Q
    |||||||  ||||||||| |  ||||||||||||||||||||||||||||    
T  3549602 aatacatcaacttttgttaatataaatttctcttataaataggaccggag 3549553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 95
Target Start/End: Original strand, 4444044 - 4444085
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggagg 95  Q
    ||||||||||| ||||| |||||||||||||| |||||||||    
T  4444044 acttttgttgatctaaaattctcttataaataagaccggagg 4444085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 18167415 - 18167334
Alignment:
Q  4 ggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 85  Q
    ||||||||||| |||| ||||||  ||||||||| | |||| ||||||  | ||||||||| |||| |||||||||| ||||    
T  18167415 ggtcaacaaaaattgacgtatttgattaaaaattaaatccatatacatcaatttttgttgatctaactttctcttattaata 18167334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 86
Target Start/End: Complemental strand, 2366396 - 2366352
Alignment:
Q  42 ccaaatacattcacttttgttgacctaaatttctcttataaatag 86  Q
    ||||||||||  ||| ||||||||| |||||||||||||||||||    
T  2366396 ccaaatacatgaactcttgttgacccaaatttctcttataaatag 2366352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 92
Target Start/End: Complemental strand, 36595818 - 36595782
Alignment:
Q  56 ttttgttgacctaaatttctcttataaataggaccgg 92  Q
    |||||||||||||| ||||||||||||||| ||||||    
T  36595818 ttttgttgacctaactttctcttataaataagaccgg 36595782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 96; Significance: 3e-47; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 3372220 - 3372121
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3372220 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 3372121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 47833710 - 47833611
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47833710 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 47833611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 48336362 - 48336263
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48336362 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 48336263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 3904714 - 3904813
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  3904714 ttgggtcaacaaaaattgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttcttttataaataggaccggaggtagta 3904813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 3993075 - 3992976
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  3993075 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccgaaatttctcttataaataggaccggaggtagta 3992976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 6121924 - 6122023
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  6121924 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaataggaccggaggtagta 6122023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 20538717 - 20538816
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20538717 ttgggtcaacaaaatttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 20538816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 24704469 - 24704370
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24704469 ttgggtcaacaaaagttaatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 24704370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 53337469 - 53337370
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53337469 ttgggtcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 53337370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 42797828 - 42797732
Alignment:
Q  4 ggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  42797828 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttatatataggaccggaggtagta 42797732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 46797824 - 46797724
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  46797824 ttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatagaaccggaggtagta 46797725  T
Q  101 g 101  Q
    |    
T  46797724 g 46797724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 5986975 - 5986876
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||    
T  5986975 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctatatttctcttataaatagaatcggaggtagta 5986876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 7579409 - 7579310
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  7579409 ttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttaacctaaatttctcttataaataggaccggaggtagta 7579310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 52756774 - 52756675
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  52756774 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttatgttgacctaaatttctcttataaataggaccggagatagta 52756675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 47838651 - 47838747
Alignment:
Q  4 ggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  47838651 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccgaaatttctcttataaataggatcggaggtagta 47838747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 9 - 100
Target Start/End: Complemental strand, 33551292 - 33551201
Alignment:
Q  9 acaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33551292 acaaaagttgatgtatctagttaaaaattcagtcaaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 33551201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 33621895 - 33621796
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||    
T  33621895 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatagaaccgaaagtagta 33621796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 43900648 - 43900549
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  43900648 ttgggttaacaaaagttgatgtatctagttaaaaattcagtccaaatacatttacttttgttgacctaaatttctcttataaataggaccggagggagta 43900549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 51894613 - 51894712
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  51894613 ttgggtcaacaaaagttgatgtatctggttaaaaattcagtccaaaaacattcacttttgttgacctaaatttttcttataaataggaccggaggtagta 51894712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 9 - 100
Target Start/End: Complemental strand, 26231668 - 26231577
Alignment:
Q  9 acaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  26231668 acaaaagttgatatatctagttaaaaattcagtccaaatacattcgcttttgttgacctaaatttctcttataaataggaccggaggtagta 26231577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 41469800 - 41469896
Alignment:
Q  4 ggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||    
T  41469800 ggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttcttttataaataggaccgaaggaagta 41469896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 40913220 - 40913319
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||| ||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  40913220 ttggatcaacaaaagttgatatatccagttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaataggaccggagggagta 40913319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 3422159 - 3422073
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatagga 88  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  3422159 ttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattca-ttttgttgacctaaatttctcttataaatagga 3422073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 41615707 - 41615794
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatagga 88  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  41615707 ttggatcaacaaaagttgatgtatttagttaaaaattaagtccaaatacattaacttttgttgacctaattttctcttataaatagga 41615794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 25855182 - 25855083
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||| |||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||  || ||||||| |||||||||||| |||| ||||    
T  25855182 ttgggtctacaaaagtcgatgtatttggttaaaaattcagtccaaatacattaacttttgttgactcaactttctctcataaataggacctgagggagta 25855083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 46 - 106
Target Start/End: Original strand, 4780371 - 4780431
Alignment:
Q  46 atacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtagtatca 106  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  4780371 atacattaacttttgttgaccaaaatttctcttataaataggaccggagggagtagtatca 4780431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 29845739 - 29845656
Alignment:
Q  6 tcaacaaaagtt-gatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggac 89  Q
    |||||||||||| |||||||| ||||||||||||||| |||||| ||| | ||||||||||||||||||||||||||| ||||||    
T  29845739 tcaacaaaagtttgatgtatt-agttaaaaattcagttcaaatatattaatttttgttgacctaaatttctcttataagtaggac 29845656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 50430449 - 50430533
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 85  Q
    |||||||||||||| ||||||||| | |||||||||||| |||||||||||  ||||||||||||| || || ||||||||||||    
T  50430449 ttgggtcaacaaaaattgatgtatctggttaaaaattcaatccaaatacatcaacttttgttgacccaacttgctcttataaata 50430533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 22 - 94
Target Start/End: Original strand, 17236839 - 17236912
Alignment:
Q  22 tatttagttaaaaattcagtccaaa-tacattcacttttgttgacctaaatttctcttataaataggaccggag 94  Q
    ||||| ||||||||||||||| ||| |||||  ||||||||||||| |||||| ||||||||||||||||||||    
T  17236839 tatttggttaaaaattcagtctaaaatacatcaacttttgttgacccaaatttttcttataaataggaccggag 17236912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 17344312 - 17344219
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 94  Q
    |||| |||||||||||||||||||    ||||||||||||| || ||||||  |||||||||||  ||| |||||||||||||||| |||||||    
T  17344312 ttggatcaacaaaagttgatgtatccgattaaaaattcagttcagatacatcaacttttgttgatttaactttctcttataaatagaaccggag 17344219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 42797816 - 42797862
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||    
T  42797816 acttttgttgacctaaaattctcttataaataggaccggagggagta 42797862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 31013117 - 31013036
Alignment:
Q  4 ggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 85  Q
    |||||||||||| |||||||| ||||||| |||| |  ||||||||||  ||||||||||| |||||| ||| |||||||||    
T  31013117 ggtcaacaaaagatgatgtatctagttaagaatttaaaccaaatacatctacttttgttgatctaaatgtcttttataaata 31013036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 102
Target Start/End: Complemental strand, 44900178 - 44900078
Alignment:
Q  2 tgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtag 101  Q
    |||||||||||||||||| |||| | |||||| | |  | ||| ||| ||  |||||||||||||  ||| ||||||||||||||||||||||| |||||    
T  44900178 tgggtcaacaaaagttgacgtatctggttaaacaattggaccagatatatcaacttttgttgaccagaatatctcttataaataggaccggagggagtag 44900079  T
Q  102 t 102  Q
    |    
T  44900078 t 44900078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 3422144 - 3422190
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  3422144 acttttgttgacccaaaattctcttataaataggaccggagggagta 3422190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 44 - 94
Target Start/End: Original strand, 5986950 - 5987000
Alignment:
Q  44 aaatacattcacttttgttgacctaaatttctcttataaataggaccggag 94  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||    
T  5986950 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggag 5987000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 6121939 - 6121893
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  6121939 acttttgttgacccaaaattctcttataaataggaccggagggagta 6121893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 9876738 - 9876653
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaa-ttcagtccaaatacattcacttttgttgacctaaatttctcttataaatag 86  Q
    |||||||||||||| || |||||||| |||||||| || |||| | ||||||| | ||||||| || ||||||||||||||||||||    
T  9876738 ttgggtcaacaaaaatttatgtatttggttaaaaaattgagtc-agatacattaaattttgttaacgtaaatttctcttataaatag 9876653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 100
Target Start/End: Original strand, 24704446 - 24704500
Alignment:
Q  46 atacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||| ||||||||||||| ||| ||||||||||||||||| |||||| ||||    
T  24704446 atacattaacttttgttgacccaaaattctcttataaataggatcggagggagta 24704500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 41469812 - 41469766
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  41469812 acttttgttgaccaaaaattctcttataaataggaccggagggagta 41469766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 46797809 - 46797855
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  46797809 acttttgttgacccaaaattctcttataaataggaccggagggagta 46797855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 47833695 - 47833741
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  47833695 acttttgttgacccaaaattctcttataaataggaccggagggagta 47833741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 47838663 - 47838617
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  47838663 acttttgttgaccaaaaattctcttataaataggaccggagggagta 47838617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 51894628 - 51894582
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  51894628 acttttgttgacccaaaattctcttataaataggaccggagggagta 51894582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 103
Target Start/End: Original strand, 3372205 - 3372254
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagtagta 103  Q
    ||||||||||||| ||| || ||||||||||||||||||||| |||||||    
T  3372205 acttttgttgacccaaaattatcttataaataggaccggagggagtagta 3372254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 103
Target Start/End: Original strand, 7579394 - 7579443
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagtagta 103  Q
    ||||||||||||| ||| ||||||||||||||| |||||||| |||||||    
T  7579394 acttttgttgacccaaaattctcttataaatagaaccggaggaagtagta 7579443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 95
Target Start/End: Complemental strand, 40913235 - 40913194
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggagg 95  Q
    ||||||||||| | ||||||||||||||||||||||||||||    
T  40913235 acttttgttgatccaaatttctcttataaataggaccggagg 40913194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 100
Target Start/End: Complemental strand, 3904727 - 3904683
Alignment:
Q  56 ttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  3904727 ttttgttgacccaaaattctcttataaataggaccggagggagta 3904683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 100
Target Start/End: Complemental strand, 20538730 - 20538686
Alignment:
Q  56 ttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  20538730 ttttgttgacccaaaattctcttataaataggaccggagggagta 20538686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 6924724 - 6924802
Alignment:
Q  10 caaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggac 89  Q
    |||||||||||| || |  || |||||| || ||||||||||| |||||||||||||||| ||| ||||||| |||||||    
T  6924724 caaaagttgatgcatctgattcaaaatttagaccaaatacattaacttttgttgacctaacttt-tcttatatataggac 6924802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 3993060 - 3993106
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| ||||    
T  3993060 acttttgttgacccaaaattctcttataaataagaccggagggagta 3993106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 33621880 - 33621926
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| || ||||||||||||||||||||| ||||    
T  33621880 acttttgttgacccaaaattatcttataaataggaccggagggagta 33621926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 41594753 - 41594651
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||  |||||||||||| | ||| ||||||  | ||| ||||||  ||||||||||||| || |||||||||||  | |||||||||  ||||    
T  41594753 ttgggtcaacttaagttgatgtatctggttcaaaatttggaccatatacatcaacttttgttgacccaactttctcttatatgtgggaccggagagagta 41594654  T
Q  101 gta 103  Q
    |||    
T  41594653 gta 41594651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 43900633 - 43900679
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||| ||| ||| |||||||||||||||||||||||| ||||    
T  43900633 acttttgttaacccaaaattctcttataaataggaccggaggaagta 43900679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 48336347 - 48336393
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| || ||||||||||||||||||||| ||||    
T  48336347 acttttgttgacccaaaattttcttataaataggaccggagggagta 48336393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 53337454 - 53337500
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||| |||||| ||| |||||||||||||||||||||||| ||||    
T  53337454 acttttattgacccaaaattctcttataaataggaccggagggagta 53337500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 41615732 - 41615683
Alignment:
Q  44 aaatacattcacttttgttgacctaaatttctcttataaataggaccgga 93  Q
    ||||||||  ||||||||||| | || |||||||||||||||||||||||    
T  41615732 aaatacatcaacttttgttgatccaattttctcttataaataggaccgga 41615683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 86
Target Start/End: Original strand, 32822285 - 32822325
Alignment:
Q  46 atacattcacttttgttgacctaaatttctcttataaatag 86  Q
    |||||| || |||||||||||||||||| ||||||||||||    
T  32822285 atacatccatttttgttgacctaaatttttcttataaatag 32822325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 43095252 - 43095336
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 85  Q
    ||||| |||||||| || |||||| | ||| ||||||  | ||| ||||||| | |||||||||| ||||| |||||||||||||    
T  43095252 ttgggccaacaaaaattaatgtatatggttcaaaatttggaccagatacattaatttttgttgacttaaatatctcttataaata 43095336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 96; Significance: 3e-47; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 10298078 - 10297979
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10298078 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 10297979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 19557083 - 19557182
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19557083 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 19557182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 22722030 - 22721931
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22722030 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 22721931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 44785427 - 44785526
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44785427 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 44785526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 49823412 - 49823511
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49823412 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 49823511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 37509020 - 37508919
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  37509020 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 37508921  T
Q  101 gt 102  Q
    ||    
T  37508920 gt 37508919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 4238690 - 4238594
Alignment:
Q  4 ggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4238690 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 4238594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 8817417 - 8817516
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  8817417 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgaaggtagta 8817516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 17653811 - 17653712
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  17653811 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 17653712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 34080061 - 34080160
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34080061 ttgggtcaacaaaagttgatgtatcttgttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 34080160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 48340496 - 48340397
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  48340496 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttgtaaataggaccggaggtagta 48340397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 21295360 - 21295456
Alignment:
Q  4 ggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21295360 ggtcaacaaaagttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 21295456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 38964488 - 38964392
Alignment:
Q  4 ggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  38964488 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaataggaccggaggtagta 38964392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 2787863 - 2787962
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  2787863 ttgggtcagcaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagatagta 2787962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 8437520 - 8437425
Alignment:
Q  5 gtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  8437520 gtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttattgacctaaatttctcttataaataggaccggaggtagta 8437425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 9111525 - 9111624
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  9111525 ttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctcttataaataggaccgaaggtagta 9111624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 40691027 - 40691126
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  40691027 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttaacctaaatttctcttataaataggaccggagttagta 40691126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 42507386 - 42507485
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  42507386 ttgggtcaacaaaagttgatgtatctagttcaaaattcagtccaaatacattcacttttgttgacctaaatttctattataaataggaccggaggtagta 42507485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 51406772 - 51406673
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  51406772 ttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 51406673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 46208126 - 46208030
Alignment:
Q  4 ggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  46208126 ggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 46208030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 36095711 - 36095810
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  36095711 ttggatcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttatcttataaataggaccggagggagta 36095810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 42170377 - 42170476
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  42170377 ttgggtcaacaaaagttgatgtatctggttaaaaattcactccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 42170476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 6 - 100
Target Start/End: Complemental strand, 35513567 - 35513473
Alignment:
Q  6 tcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  35513567 tcaataaaaggtgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgaagggagta 35513473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 33942963 - 33943055
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgga 93  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||||| ||||    
T  33942963 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattaacttttgttgacctaactttcttttataaataggatcgga 33943055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 6013367 - 6013461
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 95  Q
    ||||||||||||||||  || ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  6013367 ttgggtcaacaaaagtaaatttatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaattggactggagg 6013461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 9213612 - 9213516
Alignment:
Q  4 ggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||| ||||||||||| |||| ||| | |||||| ||||||  ||||||||||||  |||| ||| ||||||||||||||||||| ||||    
T  9213612 ggtcaacaaaaattgatgtatttggttataaaattagtccagatacatcaacttttgttgactaaaatgtcttttataaataggaccggagggagta 9213516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 43323145 - 43323072
Alignment:
Q  15 gttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatagga 88  Q
    |||||||||||| |||||||||| | |||||||||||  ||||||||||||| || ||| ||||||||||||||    
T  43323145 gttgatgtatttggttaaaaatttaatccaaatacatcaacttttgttgacccaattttttcttataaatagga 43323072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 5323306 - 5323214
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagtt-aaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgg 92  Q
    |||||||||||||||||||||||||| ||| ||||||||| | ||||||||||   ||||||||||  || ||||| || |||||||||||||    
T  5323306 ttgggtcaacaaaagttgatgtatttggttaaaaaattcaattcaaatacattattttttgttgactcaattttcttttgtaaataggaccgg 5323214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 4238678 - 4238724
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  4238678 acttttgttgaccaaaaattctcttataaataggaccggaggtagta 4238724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 8951943 - 8952009
Alignment:
Q  17 tgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaa 83  Q
    |||||||||| ||||||||||||||||||||||||| |||||||| ||   || |||||||||||||    
T  8951943 tgatgtattttgttaaaaattcagtccaaatacattaacttttgtcgattcaactttctcttataaa 8952009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 17653796 - 17653842
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  17653796 acttttgttgacccaaaattctcttataaataggaccggaggtagta 17653842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 21295372 - 21295326
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||    
T  21295372 acttttgttgacctaaaattctcttataaataggaccggagggagta 21295326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 37509005 - 37509051
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  37509005 acttttgttgacccaaaattctcttataaataggaccggaggtagta 37509051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 46208114 - 46208160
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||    
T  46208114 acttttgttgacctaaaattctcttataaataggaccggagggagta 46208160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 93
Target Start/End: Complemental strand, 8092684 - 8092595
Alignment:
Q  4 ggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgga 93  Q
    |||||||| |||||||||||| | |||||||||| |||| | ||||||  ||||| |||||   || |||||||||||||||||||||||    
T  8092684 ggtcaacagaagttgatgtatctggttaaaaatttagtcgagatacatcaactttagttgattcaattttctcttataaataggaccgga 8092595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 103
Target Start/End: Complemental strand, 19557098 - 19557049
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagtagta 103  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  19557098 acttttgttgacccaaaattctcttataaataggaccggagggagtagta 19557049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 29285791 - 29285873
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 85  Q
    |||| |||||||||||| |||||| ||||| |||||| ||  || |||  ||||||||||||||||||||||| |||||||||||    
T  29285791 ttggatcaacaaaagtttatgtatgtagttcaaaatttagatcagata--ttcacttttgttgacctaaatttatcttataaata 29285873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 94
Target Start/End: Complemental strand, 33128261 - 33128212
Alignment:
Q  45 aatacattcacttttgttgacctaaatttctcttataaataggaccggag 94  Q
    |||||||| ||||||||||||||||||||||||||||| |||||| ||||    
T  33128261 aatacattaacttttgttgacctaaatttctcttataattaggactggag 33128212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 103
Target Start/End: Complemental strand, 34080076 - 34080027
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagtagta 103  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  34080076 acttttgttgacccaaaattctcttataaataggaccggagggagtagta 34080027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 6013382 - 6013336
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  6013382 acttttgttgacccaaaattctcttataaataggaccggagggagta 6013336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 9213588 - 9213646
Alignment:
Q  42 ccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||  | |||||||||||||||||||||| ||||||||||| ||||| ||||    
T  9213588 ccaaatacatcaatttttgttgacctaaatttctctaataaataggacgggagggagta 9213646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 10298063 - 10298109
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  10298063 acttttgttgacccaaaattctcttataaataggaccggagggagta 10298109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 38964476 - 38964522
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  38964476 acttttgttgaccaaaaattctcttataaataggaccggagggagta 38964522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 40691042 - 40690996
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  40691042 acttttgttgacccaaaattctcttataaataggaccggagggagta 40690996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 48340481 - 48340527
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  48340481 acttttgttgacccaaaattctcttataaataggaccggagggagta 48340527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 49823427 - 49823381
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  49823427 acttttgttgacccaaaattctcttataaataggaccggagggagta 49823381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 95
Target Start/End: Complemental strand, 9111540 - 9111499
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggagg 95  Q
    ||||||||||||| ||| ||||||||||||||||||||||||    
T  9111540 acttttgttgacccaaaattctcttataaataggaccggagg 9111499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 95
Target Start/End: Complemental strand, 42507401 - 42507360
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggagg 95  Q
    ||||||||||||| ||| ||||||||||||||||||||||||    
T  42507401 acttttgttgacccaaaattctcttataaataggaccggagg 42507360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 102
Target Start/End: Complemental strand, 44785442 - 44785394
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagtagt 102  Q
    ||||||||||||| ||| ||||||||||||||| |||||||| ||||||    
T  44785442 acttttgttgacccaaaattctcttataaatagaaccggaggaagtagt 44785394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 100
Target Start/End: Original strand, 51406759 - 51406803
Alignment:
Q  56 ttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  51406759 ttttgttgacccaaaattctcttataaataggaccggagggagta 51406803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 2131703 - 2131802
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||  ||||  | ||  |||||| || ||| ||||||  ||||||||||||| |||| ||||| |||| |||||||||||| ||||    
T  2131703 ttgggtcaacaaaagttactgtacctggtgcaaaatttagaccagatacatcaacttttgttgacccaaatgtctctcataagtaggaccggagggagta 2131802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 101
Target Start/End: Complemental strand, 2787878 - 2787831
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagtag 101  Q
    ||||||| ||||| ||| |||||||||||||||||||||||| |||||    
T  2787878 acttttgctgacccaaaattctcttataaataggaccggagggagtag 2787831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 93
Target Start/End: Complemental strand, 8817432 - 8817393
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccgga 93  Q
    ||||||||||||| ||| ||||||||||||||||||||||    
T  8817432 acttttgttgacccaaaattctcttataaataggaccgga 8817393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 93
Target Start/End: Original strand, 22722015 - 22722054
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccgga 93  Q
    ||||||||||||| ||| ||||||||||||||||||||||    
T  22722015 acttttgttgacccaaaattctcttataaataggaccgga 22722054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 90
Target Start/End: Original strand, 26001141 - 26001184
Alignment:
Q  47 tacattcacttttgttgacctaaatttctcttataaataggacc 90  Q
    |||||| |||||||||||| ||||||||||||||||||| ||||    
T  26001141 tacattaacttttgttgacttaaatttctcttataaatatgacc 26001184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 8437509 - 8437555
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||  ||| |||||||||||||||||||||||| ||||    
T  8437509 acttttgttgactcaaaattctcttataaataggaccggagggagta 8437555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 9027188 - 9027142
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| || ||| ||||||||||||||||||||| ||||    
T  9027188 acttttgttgacccaactttatcttataaataggaccggagggagta 9027142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 30443824 - 30443762
Alignment:
Q  4 ggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacc 66  Q
    ||||||| ||||||||||||||| ||| | |||  || ||||||||||| |||||||||||||    
T  30443824 ggtcaactaaagttgatgtatttggttcataatatagaccaaatacattaacttttgttgacc 30443762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 26019514 - 26019609
Alignment:
Q  4 ggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||| |||||| |||||| | ||| |||||| |||| | ||||||| ||||| ||| ||| || |||||||||||||||| || ||||| ||||    
T  26019514 ggtcaaccaaagtttatgtatctggttcaaaatttagtcaagatacattaacttt-gttaacccaactttctcttataaatagaactggaggaagta 26019609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 90
Target Start/End: Complemental strand, 42170392 - 42170356
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggacc 90  Q
    ||||||||||||| ||| |||||||||||||||||||    
T  42170392 acttttgttgacccaaaattctcttataaataggacc 42170356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 96; Significance: 3e-47; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 3055657 - 3055558
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3055657 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 3055558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 13197741 - 13197840
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13197741 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 13197840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 15896941 - 15896842
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15896941 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 15896842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 37990044 - 37990143
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37990044 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 37990143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 41478670 - 41478769
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41478670 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 41478769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 44397646 - 44397547
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44397646 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 44397547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 44398785 - 44398686
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44398785 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 44398686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 37666641 - 37666741
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37666641 ttgggtcaactaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 37666740  T
Q  101 g 101  Q
    |    
T  37666741 g 37666741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 9 - 100
Target Start/End: Original strand, 4683971 - 4684062
Alignment:
Q  9 acaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4683971 acaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 4684062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 6648550 - 6648649
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  6648550 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgacctaaatttctcttataaataggaccggaggtagta 6648649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 16044348 - 16044447
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16044348 ttgggtcaactaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 16044447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 16243814 - 16243913
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  16243814 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttttcttataaataggaccggagatagta 16243913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 38917553 - 38917652
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  38917553 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttattgacctaaatttatcttataaataggaccggaggtagta 38917652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 9047786 - 9047885
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||||    
T  9047786 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactttttttgacctaaatttctcttataaatatgaccggagatagta 9047885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 12337968 - 12338067
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| |||||||||||||    
T  12337968 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttttcttataaatagaaccggaggtagta 12338067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 13344583 - 13344484
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  13344583 ttggatcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaatagaaccggaggtagta 13344484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 15372325 - 15372226
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  15372325 ttgggtcaacaaaagttgatgtatctcgttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggactggagggagta 15372226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 30099213 - 30099310
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtag 98  Q
    |||||||||||||||||||||||| || ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  30099213 ttgggtcaacaaaagttgatgtatctaattaaaaattcaatccaaatacattcatttttgttgacctaaatttctcttataaataggatcggaggtag 30099310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 41492927 - 41493015
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggac 89  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  41492927 ttgggtcaacaaaagttgatgtatctagttaaaaattctgtccaaatacattcacttttgttgacctaaatttcttttataaataggac 41493015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 12170430 - 12170529
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||| ||||||||| |||||| ||||    
T  12170430 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattaacttttattgacctaattttctcttgtaaataggatcggagggagta 12170529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 44804616 - 44804680
Alignment:
Q  8 aacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatt 72  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||    
T  44804616 aacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgacctaaatt 44804680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 16734875 - 16734802
Alignment:
Q  8 aacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 81  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||  ||||||||||||| || |||||||||||    
T  16734875 aacaaaagttgatgtatttggttaaaaattcagtccagatacatcaacttttgttgaccaaactttctcttata 16734802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 10 - 69
Target Start/End: Complemental strand, 41453149 - 41453090
Alignment:
Q  10 caaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaa 69  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||    
T  41453149 caaaagttgatgtattttgttaaaaattcagtccaaatacattaacttttattgacctaa 41453090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 31150733 - 31150659
Alignment:
Q  20 tgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 94  Q
    ||||| |||||||||||| |||||||||||||  ||||||||||||  || |||||||||||||||||| |||||    
T  31150733 tgtatctagttaaaaatttagtccaaatacataaacttttgttgacgcaactttctcttataaataggatcggag 31150659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 54 - 104
Target Start/End: Complemental strand, 13197756 - 13197706
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagtagtat 104  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||||||    
T  13197756 acttttgttgacccaaaattctcttataaataggaccggagggagtagtat 13197706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 41492942 - 41492896
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||    
T  41492942 acttttgttgacccaaatttctcttataaataggaccggagggagta 41492896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 13724136 - 13724221
Alignment:
Q  4 ggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggac 89  Q
    ||||||||||||||||||||||| |||||||| |  | ||| ||||||  |||||||||||||  ||| || ||||||||||||||    
T  13724136 ggtcaacaaaagttgatgtatttggttaaaaaattggaccagatacatcaacttttgttgaccagaatatcgcttataaataggac 13724221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 90
Target Start/End: Complemental strand, 36688977 - 36688892
Alignment:
Q  5 gtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggacc 90  Q
    |||||||||| ||||||||| | ||| ||||||||| | | ||||||  || |||||||||| || ||||||||||||||||||||    
T  36688977 gtcaacaaaaattgatgtatcttgtttaaaattcagacaagatacatcaacgtttgttgaccaaactttctcttataaataggacc 36688892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 30852648 - 30852747
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||| ||||||||||| |||||| |  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||| ||||    
T  30852648 ttgggacaacaaaagtttatgtatctgattcaatattcagtctagatacataaacttttattaatctaactttctcttataaataggaccggagggagta 30852747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 3055642 - 3055688
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  3055642 acttttgttgacccaaaattctcttataaataggaccggagggagta 3055688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 6648565 - 6648519
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  6648565 acttttgttgacccaaaattctcttataaataggaccggagggagta 6648519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 9047801 - 9047755
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  9047801 acttttgttgacccaaaattctcttataaataggaccggagggagta 9047755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 12337983 - 12337937
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  12337983 acttttgttgacccaaaattctcttataaataggaccggagggagta 12337937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 13724160 - 13724102
Alignment:
Q  42 ccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||  ||||||||||||||| || |||||| |||||||||||||||| ||||    
T  13724160 ccaaatacatcaacttttgttgacctagatgtctcttgtaaataggaccggagggagta 13724102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 15372310 - 15372356
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  15372310 acttttgttgacccaaaattctcttataaataggaccggagggagta 15372356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 15896926 - 15896972
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  15896926 acttttgttgacccaaaattctcttataaataggaccggagggagta 15896972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 37990059 - 37990013
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  37990059 acttttgttgacccaaaattctcttataaataggaccggagggagta 37990013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 38917568 - 38917522
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  38917568 acttttgttgacccaaaattctcttataaataggaccggagggagta 38917522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 41478685 - 41478639
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  41478685 acttttgttgacccaaaattctcttataaataggaccggagggagta 41478639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 44398770 - 44398816
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  44398770 acttttgttgacccaaaattctcttataaataggaccggagggagta 44398816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 4553069 - 4553125
Alignment:
Q  29 ttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 85  Q
    ||||||||||| |||||||||||  | ||||||||||| || |||||||||||||||    
T  4553069 ttaaaaattcaatccaaatacatctatttttgttgaccaaactttctcttataaata 4553125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 93
Target Start/End: Complemental strand, 16243829 - 16243790
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccgga 93  Q
    ||||||||||||| ||| ||||||||||||||||||||||    
T  16243829 acttttgttgacccaaaattctcttataaataggaccgga 16243790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 89
Target Start/End: Original strand, 23227344 - 23227391
Alignment:
Q  42 ccaaatacattcacttttgttgacctaaatttctcttataaataggac 89  Q
    ||||||||||  ||||||||||||| |||| |||||||||||||||||    
T  23227344 ccaaatacatcaacttttgttgaccaaaatgtctcttataaataggac 23227391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 45294419 - 45294333
Alignment:
Q  4 ggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 91  Q
    |||||||||||||| | |||||| |||||||| | ||||| |||||||| |||||||||||   |||| |||| | ||||||||||||    
T  45294419 ggtcaacaaaagttaaagtatttggttaaaaaattagtcc-aatacattaacttttgttgaatgaaatgtctcctgtaaataggaccg 45294333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 13344568 - 13344614
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||| | ||| |||||||||||||||||||||||| ||||    
T  13344568 acttttgttgatccaaaattctcttataaataggaccggagggagta 13344614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 16044363 - 16044317
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||| ||||||| ||| |||||||||||||||||||||||| ||||    
T  16044363 actttagttgacccaaaattctcttataaataggaccggagggagta 16044317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 30099228 - 30099182
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| |||||| ||||||||||||||||| ||||    
T  30099228 acttttgttgacccaaaattctctaataaataggaccggagggagta 30099182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 37666656 - 37666610
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||| ||||||| ||| |||||||||||||||||||||||| ||||    
T  37666656 actttagttgacccaaaattctcttataaataggaccggagggagta 37666610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 92
Target Start/End: Original strand, 44397631 - 44397669
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccgg 92  Q
    ||||||||||||| ||| |||||||||||||||||||||    
T  44397631 acttttgttgacccaaaattctcttataaataggaccgg 44397669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 104
Target Start/End: Complemental strand, 44804624 - 44804574
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagtagtat 104  Q
    ||||||||| || |||| |||||||||||||||||||||||| | ||||||    
T  44804624 acttttgttaacttaaaattctcttataaataggaccggagggaatagtat 44804574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 90
Target Start/End: Complemental strand, 23986873 - 23986788
Alignment:
Q  5 gtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggacc 90  Q
    |||||||||| || |||||||||||| ||||||  |  || | ||||| |||||| ||||  ||||||||||||||||||| ||||    
T  23986873 gtcaacaaaactttatgtatttagttcaaaatttggatcagaaacattaacttttattgatttaaatttctcttataaatatgacc 23986788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 16561042 - 16561126
Alignment:
Q  11 aaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 95  Q
    |||||||||||||||| ||| |||||| || ||||||| ||  |  |||||||| | || ||||||||||||||| || ||||||    
T  16561042 aaaagttgatgtattttgtttaaaatttagaccaaataaatcaatctttgttgatcaaactttctcttataaatatgatcggagg 16561126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 36089489 - 36089457
Alignment:
Q  54 acttttgttgacctaaatttctcttataaatag 86  Q
    |||||||||||||||||| ||||||||||||||    
T  36089489 acttttgttgacctaaatatctcttataaatag 36089457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 94; Significance: 5e-46; HSPs: 2)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 6162 - 6263
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6162 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccacatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 6261  T
Q  101 gt 102  Q
    ||    
T  6262 gt 6263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 6177 - 6131
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||| ||| || ||||||||||||||||||||| ||||    
T  6177 acttttgttgacccaaaattttcttataaataggaccggagggagta 6131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1707 (Bit Score: 92; Significance: 8e-45; HSPs: 1)
Name: scaffold1707
Description:

Target: scaffold1707; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 1434 - 1335
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  1434 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggatgtagta 1335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482 (Bit Score: 92; Significance: 8e-45; HSPs: 2)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 12959 - 12860
Alignment:
Q  1 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12959 ttgggtcagcaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 12860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 12944 - 12990
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||| ||||| ||| |||||||||||||||||||||||| ||||    
T  12944 acttttgctgacccaaaattctcttataaataggaccggagggagta 12990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 20 - 114
Alignment:
Q  5 gtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||  ||||||||||||| |  |||||| ||||||||| |||||||| ||||    
T  20 gtcaacaaaagttgatgtatttggttaaaaatttagtccaaatacatcaacttttgttgaccaatctttctc-tataaatagaaccggagggagta 114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 13761 - 13845
Alignment:
Q  6 tcaacaaaagtt--gatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggac 89  Q
    ||||||||||||  |||||||| ||||||||||||||| |||||| ||| | ||||||||||||||||||||||||||| ||||||    
T  13761 tcaacaaaagttttgatgtatt-agttaaaaattcagttcaaatatattaatttttgttgacctaaatttctcttataagtaggac 13845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 231337 - 231433
Alignment:
Q  4 ggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||||||| ||  ||||| ||||||||||||| ||||||  ||||||||||| | || |||||||||||| ||||| |||||| ||||    
T  231337 ggtcaacaaaagttgatatacctagttcaaaattcagtccagatacataaacttttgttgatccaactttctcttataattaggatcggagggagta 231433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 231349 - 231303
Alignment:
Q  54 acttttgttgacctaaatttctcttataaataggaccggaggtagta 100  Q
    ||||||||||||||||  ||||| |||||||||||||||||| ||||    
T  231349 acttttgttgacctaatattctcctataaataggaccggagggagta 231303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 95
Target Start/End: Original strand, 12387 - 12478
Alignment:
Q  4 ggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 95  Q
    |||||||||||  |||||||| | ||||| |||| || ||||| |||   |||||| |||||| |||| |||||||||||||||||||||||    
T  12387 ggtcaacaaaatgtgatgtatctggttaagaatttagaccaaacacaccaactttttttgaccaaaatatctcttataaataggaccggagg 12478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University