View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10143_high_2 (Length: 239)
Name: NF10143_high_2
Description: NF10143
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10143_high_2 |
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Alignment Details
Target: chr7 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 48593582 - 48593792
Alignment:
| Q |
1 |
gtcatagaaacaaagagaacagagatttatggaatattcgttgtgacttctttccacaattccaagacaaagggtgcctactcactagattccatcataa |
100 |
Q |
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| T |
48593582 |
gtcatagaaacaaagagaacagagatttatggaatattcgttgtgacttctttccacaattccaagacaaagggtgcctactcactagattccatcataa |
48593681 |
T |
|
| Q |
101 |
acaaaacaagataaactaaaggcataaacagtaaatataaggaaattccttactttattaatgtaataacaaggtataagaacaagaaattatagctttc |
200 |
Q |
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||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
48593682 |
acaaaacaagataaactaaaggcataaaccgtaaatataaggaaattccttactttattaatgtaataacaaggtataagaacaagaaattataggtttc |
48593781 |
T |
|
| Q |
201 |
ttgaaagaata |
211 |
Q |
| |
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||||||||||| |
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| T |
48593782 |
ttgaaagaata |
48593792 |
T |
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