View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10145A_low_129 (Length: 354)
Name: NF10145A_low_129
Description: NF10145A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10145A_low_129 |
 | |
|
| [»] chr6 (2 HSPs) |
| |
|
Alignment Details
Target: chr6 (Bit Score: 336; Significance: 0; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 336; E-Value: 0
Query Start/End: Original strand, 19 - 354
Target Start/End: Complemental strand, 7529032 - 7528697
Alignment:
| Q |
19 |
cacaatcagcctgggaggttccagtaatcatgttcttgatgaaatcacgatgtccgggagcatcaatgactgtgcagtagtacttggtggtctcaaattt |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7529032 |
cacaatcagcctgggaggttccagtaatcatgttcttgatgaaatcacgatgtccgggagcatcaatgactgtgcagtagtacttggtggtctcaaattt |
7528933 |
T |
|
| Q |
119 |
ccacaaggcaatatcgatggtaattcctctttcacgctcagccttaagtttgtcaagaacccatgcatacttgaatgaacgcttgttcatctcagcagct |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7528932 |
ccacaaggcaatatcgatggtaattcctctttcacgctcagccttaagtttgtcaagaacccatgcatacttgaatgaacgcttgttcatctcagcagct |
7528833 |
T |
|
| Q |
219 |
tccttctcaaatctctcgatcacacgcttgtcaatacctcctagcttgtagatcaagtgaccagttgttgttgattttccagagtcgacatgtccaatga |
318 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7528832 |
tccttctcaaatctctcgatcacacgcttgtcaatacctcctagcttgtagatcaagtgaccagttgttgttgattttccagagtcgacatgtccaatga |
7528733 |
T |
|
| Q |
319 |
cgacaatgttgatatgaatcttttcttttcccatga |
354 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
7528732 |
cgacaatgttgatatgaatcttttcttttcccatga |
7528697 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 4 - 353
Target Start/End: Complemental strand, 7519676 - 7519327
Alignment:
| Q |
4 |
caatgagatggacatcacaatcagcctgggaggttccagtaatcatgttcttgatgaaatcacgatgtccgggagcatcaatgactgtgcagtagtactt |
103 |
Q |
| |
|
|||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7519676 |
caatgataaggacagcacaatcagcctgggaggttccagtaatcatgttcttgatgaaatcacgatgtccgggagcatcaatgactgtgcagtagtactt |
7519577 |
T |
|
| Q |
104 |
ggtggtctcaaatttccacaaggcaatatcgatggtaattcctctttcacgctcagccttaagtttgtcaagaacccatgcatacttgaatgaacgcttg |
203 |
Q |
| |
|
||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| || | |||| |
|
|
| T |
7519576 |
ggtggtctcaaatttccacaaagcaatatcaatggtaattcctctttcacgctcagccttaagcttgtcaagaacccatgcgtacttgaaagacctcttg |
7519477 |
T |
|
| Q |
204 |
ttcatctcagcagcttccttctcaaatctctcgatcacacgcttgtcaatacctcctagcttgtagatcaagtgaccagttgttgttgattttccagagt |
303 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7519476 |
ttcatctcagcagcttccttctcgaatctctcgatcacacgcttgtcaatacctcctagcttgtagatcaagtgaccagttgttgttgattttccagagt |
7519377 |
T |
|
| Q |
304 |
cgacatgtccaatgacgacaatgttgatatgaatcttttcttttcccatg |
353 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
7519376 |
cgacatgtccaatgacaacaatgttgatatgaatcttttcttttcccatg |
7519327 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 182; Significance: 2e-98; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 19 - 352
Target Start/End: Original strand, 4231810 - 4232143
Alignment:
| Q |
19 |
cacaatcagcctgggaggttccagtaatcatgttcttgatgaaatcacgatgtccgggagcatcaatgactgtgcagtagtacttggtggtctcaaattt |
118 |
Q |
| |
|
|||||||||| ||||| || ||||||||||||||||| |||||||| | ||||| || ||||||||||| |||||||||||||| ||||||||||| || |
|
|
| T |
4231810 |
cacaatcagcttgggatgtaccagtaatcatgttcttaatgaaatccctgtgtccaggggcatcaatgacagtgcagtagtacttagtggtctcaaactt |
4231909 |
T |
|
| Q |
119 |
ccacaaggcaatatcgatggtaattcctctttcacgctcagccttaagtttgtcaagaacccatgcatacttgaatgaacgcttgttcatctcagcagct |
218 |
Q |
| |
|
||||| ||||| || || || || |||||||||||||||||||| || |||||||||||||| |||||||| ||||||||||||||||||||||||||| |
|
|
| T |
4231910 |
ccacagagcaatgtcaattgtgatacctctttcacgctcagccttgagcttgtcaagaacccaagcatacttaaatgaacgcttgttcatctcagcagct |
4232009 |
T |
|
| Q |
219 |
tccttctcaaatctctcgatcacacgcttgtcaatacctcctagcttgtagatcaagtgaccagttgttgttgattttccagagtcgacatgtccaatga |
318 |
Q |
| |
|
|| |||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || |||||||||||||| ||||||| |
|
|
| T |
4232010 |
tctttctcaaacctctcaatcacacgcttgtcaatacctccaagcttgtagatcaagtgaccagtggtagttgacttcccagagtcgacatggccaatga |
4232109 |
T |
|
| Q |
319 |
cgacaatgttgatatgaatcttttcttttcccat |
352 |
Q |
| |
|
| |||||||| || |||| |||||| || ||||| |
|
|
| T |
4232110 |
caacaatgttaatgtgaaccttttccttacccat |
4232143 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 246 - 341
Target Start/End: Complemental strand, 19964707 - 19964612
Alignment:
| Q |
246 |
ttgtcaatacctcctagcttgtagatcaagtgaccagttgttgttgattttccagagtcgacatgtccaatgacgacaatgttgatatgaatcttt |
341 |
Q |
| |
|
||||||||| ||| ||||||| ||||||||||||||| || ||||| || |||||||| ||||| ||||| || |||||||| | |||||||||| |
|
|
| T |
19964707 |
ttgtcaatatatccaagcttgtggatcaagtgaccagtagtggttgacttcccagagtcaacatgaccaataaccacaatgttaacatgaatcttt |
19964612 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 182; Significance: 2e-98; HSPs: 13)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 19 - 352
Target Start/End: Original strand, 43045790 - 43046123
Alignment:
| Q |
19 |
cacaatcagcctgggaggttccagtaatcatgttcttgatgaaatcacgatgtccgggagcatcaatgactgtgcagtagtacttggtggtctcaaattt |
118 |
Q |
| |
|
|||||||||| ||||| ||||| || ||||||||||| |||||||| | |||||||| ||||| ||||| ||||||||||||||||| |||||||| || |
|
|
| T |
43045790 |
cacaatcagcttgggatgttccggtgatcatgttcttaatgaaatccctgtgtccgggggcatcgatgacagtgcagtagtacttggttgtctcaaactt |
43045889 |
T |
|
| Q |
119 |
ccacaaggcaatatcgatggtaattcctctttcacgctcagccttaagtttgtcaagaacccatgcatacttgaatgaacgcttgttcatctcagcagct |
218 |
Q |
| |
|
||| | ||||| || ||||| || ||||||||||| |||||||| || |||||||| ||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
43045890 |
ccagagagcaatgtcaatggtgatacctctttcacgttcagccttgagcttgtcaaggacccaggcatacttgaatgaacgcttgttcatctcagcagct |
43045989 |
T |
|
| Q |
219 |
tccttctcaaatctctcgatcacacgcttgtcaatacctcctagcttgtagatcaagtgaccagttgttgttgattttccagagtcgacatgtccaatga |
318 |
Q |
| |
|
|| |||||||| ||||| || |||||||||||||||||||| ||||||||||||||||||||||| || |||||||| |||||||||||||| ||||||| |
|
|
| T |
43045990 |
tctttctcaaacctctcaatgacacgcttgtcaatacctccaagcttgtagatcaagtgaccagtggtggttgatttcccagagtcgacatggccaatga |
43046089 |
T |
|
| Q |
319 |
cgacaatgttgatatgaatcttttcttttcccat |
352 |
Q |
| |
|
| ||||||||||| |||| ||||||||| ||||| |
|
|
| T |
43046090 |
ccacaatgttgatgtgaaccttttctttacccat |
43046123 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 19 - 352
Target Start/End: Original strand, 43084218 - 43084551
Alignment:
| Q |
19 |
cacaatcagcctgggaggttccagtaatcatgttcttgatgaaatcacgatgtccgggagcatcaatgactgtgcagtagtacttggtggtctcaaattt |
118 |
Q |
| |
|
|||||||||| ||||| ||||| || ||||||||||| |||||||| | |||||||| ||||| ||||| ||||||||||||||||| |||||||| || |
|
|
| T |
43084218 |
cacaatcagcttgggatgttccggtgatcatgttcttaatgaaatccctgtgtccgggggcatcgatgacagtgcagtagtacttggttgtctcaaactt |
43084317 |
T |
|
| Q |
119 |
ccacaaggcaatatcgatggtaattcctctttcacgctcagccttaagtttgtcaagaacccatgcatacttgaatgaacgcttgttcatctcagcagct |
218 |
Q |
| |
|
||| | ||||| || ||||| || ||||||||||| |||||||| || |||||||| ||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
43084318 |
ccagagagcaatgtcaatggtgatacctctttcacgttcagccttgagcttgtcaaggacccaggcatacttgaatgaacgcttgttcatctcagcagct |
43084417 |
T |
|
| Q |
219 |
tccttctcaaatctctcgatcacacgcttgtcaatacctcctagcttgtagatcaagtgaccagttgttgttgattttccagagtcgacatgtccaatga |
318 |
Q |
| |
|
|| |||||||| ||||| || |||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||| ||||| ||||||| |
|
|
| T |
43084418 |
tctttctcaaacctctctatgacacgcttgtcaatacctccaagcttgtagatcaagtgaccagttgtggttgatttcccagagtcaacatggccaatga |
43084517 |
T |
|
| Q |
319 |
cgacaatgttgatatgaatcttttcttttcccat |
352 |
Q |
| |
|
| ||||||||||| |||| |||||| || ||||| |
|
|
| T |
43084518 |
ccacaatgttgatgtgaaccttttccttacccat |
43084551 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 166; E-Value: 9e-89
Query Start/End: Original strand, 19 - 352
Target Start/End: Original strand, 3301073 - 3301406
Alignment:
| Q |
19 |
cacaatcagcctgggaggttccagtaatcatgttcttgatgaaatcacgatgtccgggagcatcaatgactgtgcagtagtacttggtggtctcaaattt |
118 |
Q |
| |
|
|||||||||| ||||| |||||||||||||||||||| |||||||| | |||||||| ||||||||||| |||||||||||||| || |||||||| || |
|
|
| T |
3301073 |
cacaatcagcttgggatgttccagtaatcatgttcttaatgaaatccctgtgtccgggggcatcaatgacagtgcagtagtacttagtagtctcaaactt |
3301172 |
T |
|
| Q |
119 |
ccacaaggcaatatcgatggtaattcctctttcacgctcagccttaagtttgtcaagaacccatgcatacttgaatgaacgcttgttcatctcagcagct |
218 |
Q |
| |
|
||||| ||||| || || || || |||||||||| |||||||| || ||||| || ||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
3301173 |
ccacagagcaatgtcaattgtgatacctctttcacattcagccttgagcttgtcgagcacccaagcatacttgaatgaacgcttgttcatctcagcagct |
3301272 |
T |
|
| Q |
219 |
tccttctcaaatctctcgatcacacgcttgtcaatacctcctagcttgtagatcaagtgaccagttgttgttgattttccagagtcgacatgtccaatga |
318 |
Q |
| |
|
|| |||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||| || || ||||| || || ||||||||||| ||||||| |
|
|
| T |
3301273 |
tctttctcaaacctctcaatcacacgcttgtcaatacctccaagcttgtagatcaagtgaccggtggtggttgacttcccggagtcgacatgaccaatga |
3301372 |
T |
|
| Q |
319 |
cgacaatgttgatatgaatcttttcttttcccat |
352 |
Q |
| |
|
| |||||||| || |||| |||||| || ||||| |
|
|
| T |
3301373 |
caacaatgttaatgtgaaccttttccttacccat |
3301406 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 166; E-Value: 9e-89
Query Start/End: Original strand, 19 - 352
Target Start/End: Complemental strand, 43066617 - 43066284
Alignment:
| Q |
19 |
cacaatcagcctgggaggttccagtaatcatgttcttgatgaaatcacgatgtccgggagcatcaatgactgtgcagtagtacttggtggtctcaaattt |
118 |
Q |
| |
|
|||||||||| ||||| ||||| || ||||||||||| |||||||| | |||||||| ||||| ||||| ||||||||||||||||| |||||||| || |
|
|
| T |
43066617 |
cacaatcagcttgggatgttccggtgatcatgttcttaatgaaatccctgtgtccgggggcatcgatgacagtgcagtagtacttggttgtctcaaactt |
43066518 |
T |
|
| Q |
119 |
ccacaaggcaatatcgatggtaattcctctttcacgctcagccttaagtttgtcaagaacccatgcatacttgaatgaacgcttgttcatctcagcagct |
218 |
Q |
| |
|
||| | ||||| || ||||| || ||||||||||| |||||||| || |||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
43066517 |
ccagagagcaatgtcaatggtgatacctctttcacgttcagccttgagcttgtcaagaacccaggcatacttgaatgaacgcttgttcatctcagcagct |
43066418 |
T |
|
| Q |
219 |
tccttctcaaatctctcgatcacacgcttgtcaatacctcctagcttgtagatcaagtgaccagttgttgttgattttccagagtcgacatgtccaatga |
318 |
Q |
| |
|
|| |||||||| ||||| || |||||||||||||||||||| || |||||||| ||||||||||| || ||||| || |||||||||||||| ||||||| |
|
|
| T |
43066417 |
tctttctcaaacctctcaatgacacgcttgtcaatacctccaagtttgtagattaagtgaccagtggtggttgacttgccagagtcgacatggccaatga |
43066318 |
T |
|
| Q |
319 |
cgacaatgttgatatgaatcttttcttttcccat |
352 |
Q |
| |
|
| || |||||||| |||| |||||| || ||||| |
|
|
| T |
43066317 |
caacgatgttgatgtgaaccttttccttacccat |
43066284 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 19 - 258
Target Start/End: Original strand, 43045337 - 43045576
Alignment:
| Q |
19 |
cacaatcagcctgggaggttccagtaatcatgttcttgatgaaatcacgatgtccgggagcatcaatgactgtgcagtagtacttggtggtctcaaattt |
118 |
Q |
| |
|
|||||||||| ||||| ||||| || ||||||||||| |||||||| | |||||||| ||||| ||||| ||||||||||||||||| |||||||| || |
|
|
| T |
43045337 |
cacaatcagcttgggatgttccggtgatcatgttcttaatgaaatccctgtgtccgggggcatcgatgacagtgcagtagtacttggttgtctcaaactt |
43045436 |
T |
|
| Q |
119 |
ccacaaggcaatatcgatggtaattcctctttcacgctcagccttaagtttgtcaagaacccatgcatacttgaatgaacgcttgttcatctcagcagct |
218 |
Q |
| |
|
||| | ||||| || ||||| || ||||||||||| |||||||| || |||||||| ||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
43045437 |
ccagagagcaatgtcaatggtgatacctctttcacgttcagccttgagcttgtcaaggacccaggcatacttgaatgaacgcttgttcatctcagcagct |
43045536 |
T |
|
| Q |
219 |
tccttctcaaatctctcgatcacacgcttgtcaatacctc |
258 |
Q |
| |
|
|| |||||||| ||||| || ||||||||||||||||||| |
|
|
| T |
43045537 |
tctttctcaaacctctcaatgacacgcttgtcaatacctc |
43045576 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 19 - 342
Target Start/End: Complemental strand, 45983654 - 45983331
Alignment:
| Q |
19 |
cacaatcagcctgggaggttccagtaatcatgttcttgatgaaatcacgatgtccgggagcatcaatgactgtgcagtagtacttggtggtctcaaattt |
118 |
Q |
| |
|
|||| ||||| ||||| ||||| || ||||||||||| |||||||| | |||||||| ||||||||||| ||||||| ||||||| | |||||||| || |
|
|
| T |
45983654 |
cacagtcagcttgggacgttccggtgatcatgttcttaatgaaatccctgtgtccgggggcatcaatgacagtgcagttgtacttgtttgtctcaaactt |
45983555 |
T |
|
| Q |
119 |
ccacaaggcaatatcgatggtaattcctctttcacgctcagccttaagtttgtcaagaacccatgcatacttgaatgaacgcttgttcatctcagcagct |
218 |
Q |
| |
|
| ||| || ||| || || |||| ||||||||||| |||||||| || |||||||| ||||| |||||||||||||||||||||||||||| ||||||| |
|
|
| T |
45983554 |
cgacagggtaatgtcaattgtaacacctctttcacgttcagccttgagcttgtcaagcacccaagcatacttgaatgaacgcttgttcatcttagcagct |
45983455 |
T |
|
| Q |
219 |
tccttctcaaatctctcgatcacacgcttgtcaatacctcctagcttgtagatcaagtgaccagttgttgttgattttccagagtcgacatgtccaatga |
318 |
Q |
| |
|
|| ||||||| ||||| || |||| ||||| ||||| ||| || |||| |||||| |||||||| || ||||| || || ||||| ||||| ||||| | |
|
|
| T |
45983454 |
tctttctcaagactctcaatgacactcttgtgaatacatccaagtttgtggatcaaatgaccagtagtggttgacttcccggagtccacatgaccaataa |
45983355 |
T |
|
| Q |
319 |
cgacaatgttgatatgaatctttt |
342 |
Q |
| |
|
| |||||||| ||| ||| ||||| |
|
|
| T |
45983354 |
ccacaatgttaatacgaacctttt |
45983331 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 19 - 343
Target Start/End: Complemental strand, 45993434 - 45993110
Alignment:
| Q |
19 |
cacaatcagcctgggaggttccagtaatcatgttcttgatgaaatcacgatgtccgggagcatcaatgactgtgcagtagtacttggtggtctcaaattt |
118 |
Q |
| |
|
|||||||||| ||||| || || || ||||||||||| |||||||| | ||||||| ||||||||||| |||||| ||||||| | |||||||| || |
|
|
| T |
45993434 |
cacaatcagcttgggacgtcccggtgatcatgttcttaatgaaatccctgtgtccggaggcatcaatgacagtgcagctgtacttgtttgtctcaaactt |
45993335 |
T |
|
| Q |
119 |
ccacaaggcaatatcgatggtaattcctctttcacgctcagccttaagtttgtcaagaacccatgcatacttgaatgaacgcttgttcatctcagcagct |
218 |
Q |
| |
|
| |||| | | | || || || || |||||||||||||||| ||| || |||||||| ||||| ||||||||||||||||||||| |||||||||||||| |
|
|
| T |
45993334 |
cgacaaagaactgtcaattgtgatacctctttcacgctcagtcttgagcttgtcaagcacccaagcatacttgaatgaacgcttgatcatctcagcagct |
45993235 |
T |
|
| Q |
219 |
tccttctcaaatctctcgatcacacgcttgtcaatacctcctagcttgtagatcaagtgaccagttgttgttgattttccagagtcgacatgtccaatga |
318 |
Q |
| |
|
|| ||||||| |||||||| |||| ||||| ||||| ||| || |||| ||| || |||||||| || ||||| || || ||||||||||| ||||| | |
|
|
| T |
45993234 |
tctttctcaagactctcgatgacactcttgtgaatacatccaagtttgtggatgaaatgaccagtagtggttgacttcccggagtcgacatgaccaataa |
45993135 |
T |
|
| Q |
319 |
cgacaatgttgatatgaatcttttc |
343 |
Q |
| |
|
| |||||| | ||| ||| |||||| |
|
|
| T |
45993134 |
ccacaatgctaataggaaccttttc |
45993110 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 38 - 316
Target Start/End: Complemental strand, 7890967 - 7890689
Alignment:
| Q |
38 |
tccagtaatcatgttcttgatgaaatcacgatgtccgggagcatcaatgactgtgcagtagtacttggtggtctcaaatttccacaaggcaatatcgatg |
137 |
Q |
| |
|
|||||| ||||||||||| |||||||| | ||||| || |||||||||| |||||| | | ||||| |||||||| ||||||| | ||| || || |
|
|
| T |
7890967 |
tccagtgatcatgttcttaatgaaatccctgtgtccaggggcatcaatgagagtgcagcggaagttggttgtctcaaacttccacagagaaatgtcaatt |
7890868 |
T |
|
| Q |
138 |
gtaattcctctttcacgctcagccttaagtttgtcaagaacccatgcatacttgaatgaacgcttgttcatctcagcagcttccttctcaaatctctcga |
237 |
Q |
| |
|
|| || |||||||||||||| ||||| || |||||||| ||||| ||||||||||||||| || ||||||||||||||||||| ||||||||||| |||| |
|
|
| T |
7890867 |
gtgatacctctttcacgctcggccttgagcttgtcaagcacccaagcatacttgaatgaatgcctgttcatctcagcagcttctttctcaaatctatcga |
7890768 |
T |
|
| Q |
238 |
tcacacgcttgtcaatacctcctagcttgtagatcaagtgaccagttgttgttgattttccagagtcgacatgtccaat |
316 |
Q |
| |
|
| ||| ||| ||||||||||| |||||||||||||| ||||||| || ||||| || || ||||||||||| ||||| |
|
|
| T |
7890767 |
tgacatccttttcaatacctccaagcttgtagatcaaatgaccagccgtcgttgacttcccggagtcgacatgaccaat |
7890689 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 19 - 336
Target Start/End: Complemental strand, 38137802 - 38137485
Alignment:
| Q |
19 |
cacaatcagcctgggaggttccagtaatcatgttcttgatgaaatcacgatgtccgggagcatcaatgactgtgcagtagtacttggtggtctcaaattt |
118 |
Q |
| |
|
|||| ||||| ||||| || || |||||||||||||| |||||||| | |||||||| |||||||||| ||||||||||||||||| |||||||| || |
|
|
| T |
38137802 |
cacagtcagcttgggacgtcccggtaatcatgttcttaatgaaatccctgtgtccgggggcatcaatgagagtgcagtagtacttggtagtctcaaactt |
38137703 |
T |
|
| Q |
119 |
ccacaaggcaatatcgatggtaattcctctttcacgctcagccttaagtttgtcaagaacccatgcatacttgaatgaacgcttgttcatctcagcagct |
218 |
Q |
| |
|
||| | ||| || || || || |||||||||||||| ||||| || ||||| || ||||| ||||||||||| || ||||||| ||||||| |||| |
|
|
| T |
38137702 |
tgacagagaaatgtcaatagtgatacctctttcacgctcggccttgagcttgtcgagcacccaagcatacttgaacgatggcttgtttatctcagtagct |
38137603 |
T |
|
| Q |
219 |
tccttctcaaatctctcgatcacacgcttgtcaatacctcctagcttgtagatcaagtgaccagttgttgttgattttccagagtcgacatgtccaatga |
318 |
Q |
| |
|
|| ||||||| |||||| || ||| ||| ||||||||||| || ||||||||||| ||||||| || ||||| || |||||||| ||||| ||||| | |
|
|
| T |
38137602 |
tctttctcaagtctctcaatgacatccttttcaatacctccaagtttgtagatcaaatgaccagcagtagttgacttcccagagtcaacatgaccaataa |
38137503 |
T |
|
| Q |
319 |
cgacaatgttgatatgaa |
336 |
Q |
| |
|
| |||| ||| ||||||| |
|
|
| T |
38137502 |
ccacaacgttaatatgaa |
38137485 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 47 - 343
Target Start/End: Complemental strand, 40034612 - 40034318
Alignment:
| Q |
47 |
catgttcttgatgaaatcacgatgtccgggagcatcaatgactgtgcagtagtacttggtggtctcaaatttccacaaggcaatatcgatggtaattcct |
146 |
Q |
| |
|
|||||||||||||||||| |||||||| || ||||||| ||||||| ||| ||||| |||||||| || ||| || |||||| || |||| ||| |
|
|
| T |
40034612 |
catgttcttgatgaaatctg--tgtccgggggcgtcaatgagagtgcagtggtatttggttgtctcaaacttggacatggaaatatcaattgtaacacct |
40034515 |
T |
|
| Q |
147 |
ctttcacgctcagccttaagtttgtcaagaacccatgcatacttgaatgaacgcttgttcatctcagcagcttccttctcaaatctctcgatcacacgct |
246 |
Q |
| |
|
||||||||||||||||| || |||||||| ||||| |||||||||||||| ||||||||||||||||||||||| ||||||||| |||| || ||| || |
|
|
| T |
40034514 |
ctttcacgctcagccttgagcttgtcaagtacccaagcatacttgaatgagcgcttgttcatctcagcagcttctttctcaaatttctcaatgacatcct |
40034415 |
T |
|
| Q |
247 |
tgtcaatacctcctagcttgtagatcaagtgaccagttgttgttgattttccagagtcgacatgtccaatgacgacaatgttgatatgaatcttttc |
343 |
Q |
| |
|
| | |||||| || |||||||||||||| |||||| || ||||| || ||||||||||||| ||||| | || ||||| ||||||| |||||| |
|
|
| T |
40034414 |
ttttaataccgccaagcttgtagatcaaatgaccaccagtggttgacttcccagagtcgacattaccaataaatacgatgttaatatgaaccttttc |
40034318 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 45 - 282
Target Start/End: Complemental strand, 7888695 - 7888458
Alignment:
| Q |
45 |
atcatgttcttgatgaaatcacgatgtccgggagcatcaatgactgtgcagtagtacttggtggtctcaaatttccacaaggcaatatcgatggtaattc |
144 |
Q |
| |
|
|||||||||||||||||||| | |||||||| |||||||||| |||||| |||| |||| |||| ||| ||||| | | ||| || || || || | |
|
|
| T |
7888695 |
atcatgttcttgatgaaatccctgtgtccgggggcatcaatgagagtgcagcagtagctggttgtctgaaacttccaaagagaaatgtcaattgtgatac |
7888596 |
T |
|
| Q |
145 |
ctctttcacgctcagccttaagtttgtcaagaacccatgcatacttgaatgaacgcttgttcatctcagcagcttccttctcaaatctctcgatcacacg |
244 |
Q |
| |
|
||||||||||||||||||| ||||||||||| ||||| |||||||||||| |||| |||| |||||||||||||| ||||||| | ||||||| ||| |
|
|
| T |
7888595 |
ctctttcacgctcagccttgagtttgtcaagcacccaagcatacttgaataaacgtctgtttatctcagcagcttctttctcaagtttctcgatgacatc |
7888496 |
T |
|
| Q |
245 |
cttgtcaatacctcctagcttgtagatcaagtgaccag |
282 |
Q |
| |
|
||| ||||||||||| |||||||||||||| ||||||| |
|
|
| T |
7888495 |
cttttcaatacctccaagcttgtagatcaaatgaccag |
7888458 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 45 - 345
Target Start/End: Original strand, 51291985 - 51292284
Alignment:
| Q |
45 |
atcatgttcttgatgaaatcacgatgtccgggagcatcaatgactgtgcagtagtacttggtggtctcaaatttccacaaggcaatatcgatggtaattc |
144 |
Q |
| |
|
||||||||||| ||||||| | ||||||||| |||||||||| ||||| ||||||||| | || ||||| || | | | ||| || || || || | |
|
|
| T |
51291985 |
atcatgttcttaatgaaattcccatgtccgggggcatcaatgagagtgcaatagtacttgattgt-tcaaacttggatagagaaatgtcaattgtgatac |
51292083 |
T |
|
| Q |
145 |
ctctttcacgctcagccttaagtttgtcaagaacccatgcatacttgaatgaacgcttgttcatctcagcagcttccttctcaaatctctcgatcacacg |
244 |
Q |
| |
|
||||||||||||||||||| | |||||||| ||||| |||||| ||||||||||| |||||||||||| |||||| ||||||| |||||| || || |
|
|
| T |
51292084 |
ctctttcacgctcagccttgaacttgtcaagcacccaagcatacgtgaatgaacgcatgttcatctcagtagcttctttctcaagtctctcaatgtcatt |
51292183 |
T |
|
| Q |
245 |
cttgtcaatacctcctagcttgtagatcaagtgaccagttgttgttgattttccagagtcgacatgtccaatgacgacaatgttgatatgaatcttttct |
344 |
Q |
| |
|
||||||||||||||| |||||||||||||| ||||||| || |||| |||||| |||||||||| ||||| | |||||||| ||| ||| ||||||| |
|
|
| T |
51292184 |
cttgtcaatacctccaagcttgtagatcaaatgaccagcagtatttgactttccatagtcgacatgaccaataaacacaatgttaatacgaaccttttct |
51292283 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 273
Target Start/End: Complemental strand, 43076730 - 43076477
Alignment:
| Q |
19 |
cacaatcagcctgggaggttccagtaatcatgttcttgatgaaatcacgatgtccgggagcatcaatgactgtgcagtagtacttggtggtctcaaattt |
118 |
Q |
| |
|
|||||||||| ||||| || ||||| ||||||||||| ||||||| ||||| || |||||||||| |||| ||| ||| || |||||||| || |
|
|
| T |
43076730 |
cacaatcagcttgggacgtcccagtgatcatgttcttaatgaaattcttgtgtcccgggacatcaatgacaacgcagcagttctttgttgtctcaaactt |
43076631 |
T |
|
| Q |
119 |
ccacaaggcaatatcgatggtaattcctctttcacgctcagccttaagtttgtcaagaacccatgcatacttgaatgaacgcttgttcatctcagcagct |
218 |
Q |
| |
|
||| | | ||| || |||||| | ||||||||||| |||||| | || |||||||| | ||| |||||||||| |||| ||| ||| ||||||||| |
|
|
| T |
43076630 |
ccagagagaaatctcaatggta-tacctctttcacgttcagccctgagcttgtcaaggatccaggcatacttgactgaagtcttacccatttcagcagct |
43076532 |
T |
|
| Q |
219 |
tccttctcaaatctctcgatcacacgcttgtcaatacctcctagcttgtagatca |
273 |
Q |
| |
|
|| ||||||| |||| || |||| |||||||| |||||| || |||||||||| |
|
|
| T |
43076531 |
tctatctcaaacttctcaatgacactcttgtcaacacctccaagtttgtagatca |
43076477 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 106; Significance: 5e-53; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 19 - 316
Target Start/End: Original strand, 4620033 - 4620330
Alignment:
| Q |
19 |
cacaatcagcctgggaggttccagtaatcatgttcttgatgaaatcacgatgtccgggagcatcaatgactgtgcagtagtacttggtggtctcaaattt |
118 |
Q |
| |
|
|||| ||||| ||||| ||||| || ||||||||||| |||||||| | |||||||| |||||||||| ||||||||||||||||| |||||||| || |
|
|
| T |
4620033 |
cacagtcagcttgggatgttccggtgatcatgttcttaatgaaatctctgtgtccgggggcatcaatgagagtgcagtagtacttggttgtctcaaactt |
4620132 |
T |
|
| Q |
119 |
ccacaaggcaatatcgatggtaattcctctttcacgctcagccttaagtttgtcaagaacccatgcatacttgaatgaacgcttgttcatctcagcagct |
218 |
Q |
| |
|
||| | ||| ||||| || || |||||||||||||||||||| || |||||||| ||||| ||||| |||||||||| | |||| |||||||| ||| |
|
|
| T |
4620133 |
ggacagagaaatgtcgattgtgatacctctttcacgctcagccttgagcttgtcaagcacccaagcatatttgaatgaacacatgtttatctcagcggct |
4620232 |
T |
|
| Q |
219 |
tccttctcaaatctctcgatcacacgcttgtcaatacctcctagcttgtagatcaagtgaccagttgttgttgattttccagagtcgacatgtccaat |
316 |
Q |
| |
|
|| |||||||||| ||| || ||| ||| | ||||||||| |||||||||||||| ||||||| || ||||| || |||||||||||||| ||||| |
|
|
| T |
4620233 |
tctttctcaaatcgctcaatgacatcctttttaatacctccaagcttgtagatcaaatgaccagcagtggttgacttcccagagtcgacatgaccaat |
4620330 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 45 - 310
Target Start/End: Original strand, 1846761 - 1847026
Alignment:
| Q |
45 |
atcatgttcttgatgaaatcacgatgtccgggagcatcaatgactgtgcagtagtacttggtggtctcaaatttccacaaggcaatatcgatggtaattc |
144 |
Q |
| |
|
||||||||||| |||||||| | |||||||| |||||||||| |||||| | | ||||| |||||||| ||||| | | ||| || || || || | |
|
|
| T |
1846761 |
atcatgttcttaatgaaatccctgtgtccgggggcatcaatgagagtgcagaggaagttggttgtctcaaacttccatagagaaatgtcaattgtgatac |
1846860 |
T |
|
| Q |
145 |
ctctttcacgctcagccttaagtttgtcaagaacccatgcatacttgaatgaacgcttgttcatctcagcagcttccttctcaaatctctcgatcacacg |
244 |
Q |
| |
|
||||||||||||| ||||| || |||||||| ||||| |||||||||||||||||| |||| |||||||||||||| ||||||||||||||||| ||| |
|
|
| T |
1846861 |
ctctttcacgctcggccttgagcttgtcaagcacccaagcatacttgaatgaacgcctgtttatctcagcagcttctttctcaaatctctcgatgacatc |
1846960 |
T |
|
| Q |
245 |
cttgtcaatacctcctagcttgtagatcaagtgaccagttgttgttgattttccagagtcgacatg |
310 |
Q |
| |
|
||| ||||||||||| |||||||||||||| ||||||| || ||||| || || ||||||||||| |
|
|
| T |
1846961 |
cttttcaatacctccaagcttgtagatcaaatgaccagccgtcgttgacttcccggagtcgacatg |
1847026 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 69 - 346
Target Start/End: Complemental strand, 4787402 - 4787125
Alignment:
| Q |
69 |
tgtccgggagcatcaatgactgtgcagtagtacttggtggtctcaaatttccacaaggcaatatcgatggtaattcctctttcacgctcagccttaagtt |
168 |
Q |
| |
|
|||||||||||||||||||| ||||||| ||||||| | |||||||| || ||| | ||| || || || ||||||||||||||| |||| |||| |
|
|
| T |
4787402 |
tgtccgggagcatcaatgacagtgcagttgtacttgtttgtctcaaacttggacatagaaatgtcaattgtggcacctctttcacgctcacccttgagtt |
4787303 |
T |
|
| Q |
169 |
tgtcaagaacccatgcatacttgaatgaacgcttgttcatctcagcagcttccttctcaaatctctcgatcacacgcttgtcaatacctcctagcttgta |
268 |
Q |
| |
|
||||||| ||||| ||||||||||||||| || ||| |||| |||||| ||||||| |||||| || ||| ||| |||| ||||| |||||||| |
|
|
| T |
4787302 |
tgtcaagcacccaagcatacttgaatgaaggccagttagcctcataagcttctttctcaagtctctcaatgacatcctttccaatgcctccaagcttgta |
4787203 |
T |
|
| Q |
269 |
gatcaagtgaccagttgttgttgattttccagagtcgacatgtccaatgacgacaatgttgatatgaatcttttcttt |
346 |
Q |
| |
|
|| ||| ||| |||| || ||||| || || |||| | | || ||||| || |||||||| ||| ||| ||||||||| |
|
|
| T |
4787202 |
gagcaaatgagcagtggtggttgacttcccggagttggcttgaccaataaccacaatgttaatacgaaccttttcttt |
4787125 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 46 - 328
Target Start/End: Original strand, 4297843 - 4298125
Alignment:
| Q |
46 |
tcatgttcttgatgaaatcacgatgtccgggagcatcaatgactgtgcagtagtacttggtggtctcaaatttccacaaggcaatatcgatggtaattcc |
145 |
Q |
| |
|
|||||||||| ||| | || | ||||||||| ||||||||||| |||||| ||||||| | |||||||| || ||| | ||| || || || || |
|
|
| T |
4297843 |
tcatgttcttaatgcattccctatgtccgggggcatcaatgacaatgcagttgtacttgtttgtctcaaacttggacagagaaatgtcaattgtggcacc |
4297942 |
T |
|
| Q |
146 |
tctttcacgctcagccttaagtttgtcaagaacccatgcatacttgaatgaacgcttgttcatctcagcagcttccttctcaaatctctcgatcacacgc |
245 |
Q |
| |
|
||||||| | ||||| || ||||||||||| ||||| ||||||||||| ||| || |||| | |||| || || | ||||||| |||||| || ||| | |
|
|
| T |
4297943 |
tctttcatggtcagctttgagtttgtcaagtacccaagcatacttgaacgaaggcatgttaacctcaacatctactttctcaagtctctcaatgacatcc |
4298042 |
T |
|
| Q |
246 |
ttgtcaatacctcctagcttgtagatcaagtgaccagttgttgttgattttccagagtcgacatgtccaatgacgacaatgtt |
328 |
Q |
| |
|
|| ||||| ||||| || ||||||| ||| ||| |||| || ||||| || || |||| | |||| ||||| || |||||||| |
|
|
| T |
4298043 |
ttttcaatgcctccgagtttgtagagcaaatgagcagtagtggttgacttcccggagttggcatggccaataaccacaatgtt |
4298125 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 100; Significance: 2e-49; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 19 - 341
Target Start/End: Original strand, 34691170 - 34691490
Alignment:
| Q |
19 |
cacaatcagcctgggaggttccagtaatcatgttcttgatgaaatcacgatgtccgggagcatcaatgactgtgcagtagtacttggtggtctcaaattt |
118 |
Q |
| |
|
|||| ||||| |||||||| || || ||||||||||| |||||||| | ||||||||||||||||||| ||| || |||||||||| |||||||| || |
|
|
| T |
34691170 |
cacagtcagcttgggaggtcccggtgatcatgttcttaatgaaatccctgtgtccgggagcatcaatgagagtgaagcagtacttggttgtctcaaactt |
34691269 |
T |
|
| Q |
119 |
ccacaaggcaatatcgatggtaattcctctttcacgctcagccttaagtttgtcaagaacccatgcatacttgaatgaacgcttgttcatctcagcagct |
218 |
Q |
| |
|
|| | | ||| || || || || ||||||||||||||||| || || |||||||| ||||| |||||||||||||||||||| ||||||||||||||| |
|
|
| T |
34691270 |
gcata--gaaatgtcaattgtgatacctctttcacgctcagcgttgagcttgtcaagcacccaagcatacttgaatgaacgcttcttcatctcagcagct |
34691367 |
T |
|
| Q |
219 |
tccttctcaaatctctcgatcacacgcttgtcaatacctcctagcttgtagatcaagtgaccagttgttgttgattttccagagtcgacatgtccaatga |
318 |
Q |
| |
|
|| ||| ||| | ||| || ||| ||| ||||||||||| |||||||| ||||| ||||||| || ||||| || ||||||| |||||| ||||| | |
|
|
| T |
34691368 |
tctttcccaagtgcctcaatggcactcttttcaatacctccaagcttgtaaatcaaatgaccagccgtagttgacttcccagagttgacatgaccaataa |
34691467 |
T |
|
| Q |
319 |
cgacaatgttgatatgaatcttt |
341 |
Q |
| |
|
|||||||||||||||| |||| |
|
|
| T |
34691468 |
acacaatgttgatatgaaccttt |
34691490 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 19 - 341
Target Start/End: Original strand, 34713582 - 34713902
Alignment:
| Q |
19 |
cacaatcagcctgggaggttccagtaatcatgttcttgatgaaatcacgatgtccgggagcatcaatgactgtgcagtagtacttggtggtctcaaattt |
118 |
Q |
| |
|
|||| ||||| |||||||| || || ||||||||||| |||||||| | ||||||||||||||||||| ||| || |||||||||| |||||||| || |
|
|
| T |
34713582 |
cacagtcagcttgggaggtcccggtgatcatgttcttaatgaaatccctgtgtccgggagcatcaatgagagtgaagcagtacttggttgtctcaaactt |
34713681 |
T |
|
| Q |
119 |
ccacaaggcaatatcgatggtaattcctctttcacgctcagccttaagtttgtcaagaacccatgcatacttgaatgaacgcttgttcatctcagcagct |
218 |
Q |
| |
|
|| | | ||| || || || || ||||||||||||||||| || || |||||||| ||||| |||||||||||||||||||| ||||||||||||||| |
|
|
| T |
34713682 |
gcata--gaaatgtcaattgtgatacctctttcacgctcagcgttgagcttgtcaagcacccaagcatacttgaatgaacgcttcttcatctcagcagct |
34713779 |
T |
|
| Q |
219 |
tccttctcaaatctctcgatcacacgcttgtcaatacctcctagcttgtagatcaagtgaccagttgttgttgattttccagagtcgacatgtccaatga |
318 |
Q |
| |
|
|| ||| ||| | ||| || ||| ||| ||||||||||| |||||||| ||||| ||||||| || ||||| || ||||||| |||||| ||||| | |
|
|
| T |
34713780 |
tctttcccaagtgcctcaatggcactcttttcaatacctccaagcttgtaaatcaaatgaccagccgtagttgacttcccagagttgacatgaccaataa |
34713879 |
T |
|
| Q |
319 |
cgacaatgttgatatgaatcttt |
341 |
Q |
| |
|
|||||||||||||||| |||| |
|
|
| T |
34713880 |
acacaatgttgatatgaaccttt |
34713902 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 69 - 333
Target Start/End: Original strand, 16232567 - 16232831
Alignment:
| Q |
69 |
tgtccgggagcatcaatgactgtgcagtagtacttggtggtctcaaatttccacaaggcaatatcgatggtaattcctctttcacgctcagccttaagtt |
168 |
Q |
| |
|
|||||||| |||||||||| ||||| |||||||||| |||||||| || |||| || ||| || || || || |||||||||||||||||||| || | |
|
|
| T |
16232567 |
tgtccgggggcatcaatgagggtgcaacagtacttggttgtctcaaacttgcacatggaaatgtcaattgtgatacctctttcacgctcagccttgagct |
16232666 |
T |
|
| Q |
169 |
tgtcaagaacccatgcatacttgaatgaacgcttgttcatctcagcagcttccttctcaaatctctcgatcacacgcttgtcaatacctcctagcttgta |
268 |
Q |
| |
|
||||||| ||||| |||||||||||||||||| | ||||||||||||||||| ||| ||| | ||| || ||| ||| | ||||||||| |||||||| |
|
|
| T |
16232667 |
tgtcaagcacccaagcatacttgaatgaacgcatcttcatctcagcagcttctttcccaagtgcctcaatggcactcttttgaatacctccaagcttgta |
16232766 |
T |
|
| Q |
269 |
gatcaagtgaccagttgttgttgattttccagagtcgacatgtccaatgacgacaatgttgatat |
333 |
Q |
| |
|
| ||| ||||| | || ||||| || ||||| | |||||| ||||| | |||||||||||||| |
|
|
| T |
16232767 |
aagcaaatgaccggcagtagttgacttcccagaattgacatgaccaataaagacaatgttgatat |
16232831 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 144 - 341
Target Start/End: Original strand, 33861304 - 33861504
Alignment:
| Q |
144 |
cctctttcacgctcagccttaagtttgtcaagaacccat---gcatacttgaatgaacgcttgttcatctcagcagcttccttctcaaatctctcgatca |
240 |
Q |
| |
|
||||||||||||||||||| || |||||||||||||| |||||||||||||||| ||||| |||| ||||||||| | ||||| || || || | |
|
|
| T |
33861304 |
cctctttcacgctcagcctcgagcttgtcaagaacccaattagcatacttgaatgaacacttgtcgatctgagcagcttcttcctcaagactgtcaatga |
33861403 |
T |
|
| Q |
241 |
cacgcttgtcaatacctcctagcttgtagatcaagtgaccagttgttgttgattttccagagtcgacatgtccaatgacgacaatgttgatatgaatctt |
340 |
Q |
| |
|
|| |||||||||||| ||| ||||||| || ||| ||||| ||||| ||||| || |||||||| ||||| ||||| || |||||||| ||||||| ||| |
|
|
| T |
33861404 |
catgcttgtcaatacatccaagcttgtggagcaaatgaccggttgtggttgacttcccagagtcaacatgaccaataaccacaatgttaatatgaaactt |
33861503 |
T |
|
| Q |
341 |
t |
341 |
Q |
| |
|
| |
|
|
| T |
33861504 |
t |
33861504 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 74; Significance: 7e-34; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 19 - 228
Target Start/End: Original strand, 16349482 - 16349691
Alignment:
| Q |
19 |
cacaatcagcctgggaggttccagtaatcatgttcttgatgaaatcacgatgtccgggagcatcaatgactgtgcagtagtacttggtggtctcaaattt |
118 |
Q |
| |
|
|||||||||| ||||| || ||||||||||||||||| |||||||| | |||||||| |||||||||| |||||| ||||||||| |||||||| || |
|
|
| T |
16349482 |
cacaatcagcttgggatgtcccagtaatcatgttcttaatgaaatccctgtgtccgggggcatcaatgatagtgcagcggtacttggttgtctcaaaatt |
16349581 |
T |
|
| Q |
119 |
ccacaaggcaatatcgatggtaattcctctttcacgctcagccttaagtttgtcaagaacccatgcatacttgaatgaacgcttgttcatctcagcagct |
218 |
Q |
| |
|
| ||| | | | || || || || |||||||| ||||||||||| ||||||||||||||||| ||||||||||| ||| |||||| | |||||||||| |
|
|
| T |
16349582 |
caacatagaattgtcaattgtgatacctctttcgcgctcagccttgagtttgtcaagaacccacgcatacttgaaagaatccttgtttaactcagcagct |
16349681 |
T |
|
| Q |
219 |
tccttctcaa |
228 |
Q |
| |
|
| ||||||| |
|
|
| T |
16349682 |
ttattctcaa |
16349691 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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