View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10145A_low_137 (Length: 348)

Name: NF10145A_low_137
Description: NF10145A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10145A_low_137
NF10145A_low_137
[»] chr7 (49 HSPs)
chr7 (123-323)||(13256281-13256481)
chr7 (146-323)||(37380469-37380647)
chr7 (146-311)||(17467668-17467834)
chr7 (146-311)||(17585380-17585546)
chr7 (71-328)||(13866341-13866599)
chr7 (172-331)||(3048995-3049154)
chr7 (123-285)||(48274108-48274270)
chr7 (123-295)||(3289021-3289193)
chr7 (129-285)||(19486233-19486389)
chr7 (153-285)||(4280750-4280881)
chr7 (153-281)||(21734710-21734841)
chr7 (153-269)||(21734151-21734269)
chr7 (164-312)||(11054311-11054458)
chr7 (77-312)||(42056883-42057117)
chr7 (170-278)||(28720332-28720439)
chr7 (153-288)||(40554808-40554942)
chr7 (175-285)||(37784671-37784781)
chr7 (170-282)||(370704-370815)
chr7 (69-287)||(16383369-16383588)
chr7 (153-288)||(8756440-8756574)
chr7 (186-285)||(10063205-10063304)
chr7 (172-282)||(2190864-2190974)
chr7 (170-282)||(13757987-13758098)
chr7 (170-282)||(14251426-14251537)
chr7 (170-287)||(15951319-15951435)
chr7 (68-287)||(32494630-32494850)
chr7 (175-278)||(3170734-3170836)
chr7 (172-282)||(26070944-26071054)
chr7 (172-282)||(26094731-26094841)
chr7 (172-283)||(111955-112066)
chr7 (191-290)||(13698971-13699070)
chr7 (77-282)||(15525159-15525364)
chr7 (170-280)||(15927186-15927296)
chr7 (172-282)||(2028378-2028488)
chr7 (190-288)||(13898098-13898196)
chr7 (170-288)||(29004694-29004811)
chr7 (68-287)||(27102065-27102285)
chr7 (68-287)||(27109413-27109633)
chr7 (170-282)||(18980548-18980659)
chr7 (170-288)||(33001787-33001902)
chr7 (170-236)||(48744207-48744272)
chr7 (170-287)||(7822336-7822452)
chr7 (170-287)||(7829647-7829763)
chr7 (167-312)||(25123885-25124029)
chr7 (170-287)||(27176041-27176157)
chr7 (170-287)||(38784261-38784377)
chr7 (184-283)||(3894492-3894591)
chr7 (170-214)||(18364618-18364662)
chr7 (77-140)||(25124043-25124107)
[»] chr3 (63 HSPs)
chr3 (123-323)||(12536240-12536440)
chr3 (123-328)||(15517237-15517442)
chr3 (123-323)||(34851562-34851761)
chr3 (146-323)||(17547753-17547930)
chr3 (140-311)||(11849872-11850043)
chr3 (164-321)||(23395317-23395474)
chr3 (146-323)||(20188314-20188493)
chr3 (146-285)||(29172136-29172275)
chr3 (172-323)||(38167327-38167478)
chr3 (129-285)||(37641765-37641921)
chr3 (129-285)||(36167156-36167312)
chr3 (71-285)||(8604463-8604678)
chr3 (123-285)||(22147021-22147183)
chr3 (164-285)||(13511691-13511812)
chr3 (172-328)||(23491785-23491941)
chr3 (129-285)||(21619007-21619163)
chr3 (153-262)||(24340236-24340345)
chr3 (164-285)||(12158908-12159028)
chr3 (146-285)||(52338237-52338376)
chr3 (123-285)||(10550929-10551091)
chr3 (155-285)||(13968093-13968222)
chr3 (155-285)||(13973568-13973697)
chr3 (139-236)||(13667362-13667459)
chr3 (77-312)||(53770468-53770702)
chr3 (170-287)||(50351132-50351248)
chr3 (153-285)||(14818710-14818842)
chr3 (164-284)||(45530910-45531030)
chr3 (71-285)||(13326952-13327166)
chr3 (170-288)||(9511229-9511346)
chr3 (170-288)||(9519204-9519321)
chr3 (167-285)||(17100106-17100224)
chr3 (71-285)||(11061587-11061802)
chr3 (170-287)||(16820749-16820865)
chr3 (170-282)||(18910610-18910721)
chr3 (190-290)||(37038669-37038769)
chr3 (153-249)||(52212722-52212818)
chr3 (190-288)||(3394083-3394181)
chr3 (71-312)||(54423440-54423682)
chr3 (187-287)||(17956530-17956630)
chr3 (187-287)||(28557657-28557757)
chr3 (68-278)||(54038706-54038917)
chr3 (190-288)||(13025897-13025995)
chr3 (190-288)||(13029489-13029587)
chr3 (190-288)||(42324303-42324400)
chr3 (77-312)||(16260889-16261123)
chr3 (191-288)||(18366841-18366938)
chr3 (170-287)||(30206849-30206965)
chr3 (170-287)||(40039425-40039541)
chr3 (170-242)||(17758759-17758830)
chr3 (170-242)||(19060079-19060150)
chr3 (77-312)||(51961555-51961788)
chr3 (71-285)||(11882630-11882844)
chr3 (123-278)||(19430553-19430705)
chr3 (190-288)||(178810-178908)
chr3 (190-288)||(17513452-17513550)
chr3 (68-287)||(1468167-1468387)
chr3 (170-287)||(16934513-16934629)
chr3 (193-288)||(12276422-12276517)
chr3 (173-286)||(2843646-2843758)
chr3 (170-287)||(49232045-49232161)
chr3 (172-286)||(3992005-3992119)
chr3 (207-285)||(20417784-20417862)
chr3 (175-236)||(15045662-15045723)
[»] scaffold0004 (4 HSPs)
scaffold0004 (123-328)||(75374-75579)
scaffold0004 (153-323)||(60016-60186)
scaffold0004 (123-328)||(72524-72732)
scaffold0004 (239-312)||(187619-187691)
[»] chr2 (38 HSPs)
chr2 (123-328)||(22703559-22703764)
chr2 (123-328)||(24087831-24088036)
chr2 (146-323)||(6477518-6477695)
chr2 (14-267)||(33127684-33127936)
chr2 (146-317)||(45617893-45618064)
chr2 (164-284)||(19358513-19358633)
chr2 (71-312)||(9653472-9653712)
chr2 (155-285)||(27366844-27366973)
chr2 (170-278)||(34877461-34877569)
chr2 (184-287)||(20273231-20273334)
chr2 (173-312)||(19659475-19659613)
chr2 (187-287)||(16935047-16935147)
chr2 (187-287)||(17005707-17005807)
chr2 (71-282)||(36891263-36891474)
chr2 (77-312)||(21274641-21274875)
chr2 (123-236)||(24383329-24383442)
chr2 (170-283)||(42178489-42178601)
chr2 (170-282)||(12642170-12642281)
chr2 (170-279)||(12636396-12636504)
chr2 (68-287)||(12727998-12728218)
chr2 (68-287)||(34824057-34824277)
chr2 (170-282)||(3799131-3799242)
chr2 (177-285)||(23822247-23822355)
chr2 (177-285)||(23831326-23831434)
chr2 (170-288)||(43707353-43707464)
chr2 (170-279)||(8943466-8943574)
chr2 (191-288)||(28349790-28349887)
chr2 (68-287)||(28776235-28776455)
chr2 (193-288)||(21245307-21245402)
chr2 (190-288)||(24273362-24273460)
chr2 (68-287)||(11231766-11231986)
chr2 (170-287)||(24686313-24686429)
chr2 (187-287)||(22775717-22775817)
chr2 (187-287)||(22781095-22781195)
chr2 (170-287)||(22283565-22283681)
chr2 (170-287)||(22513717-22513833)
chr2 (170-287)||(22274332-22274448)
chr2 (71-139)||(19659645-19659714)
[»] scaffold0021 (2 HSPs)
scaffold0021 (123-323)||(147212-147412)
scaffold0021 (173-283)||(87752-87862)
[»] chr4 (43 HSPs)
chr4 (123-323)||(2584407-2584607)
chr4 (123-323)||(4830420-4830620)
chr4 (123-323)||(4833715-4833915)
chr4 (123-321)||(18230331-18230529)
chr4 (154-310)||(13447132-13447288)
chr4 (155-311)||(14931418-14931573)
chr4 (153-279)||(6512256-6512382)
chr4 (123-285)||(14280875-14281037)
chr4 (123-285)||(22354305-22354467)
chr4 (146-285)||(54798192-54798331)
chr4 (153-294)||(4615344-4615485)
chr4 (158-262)||(15368180-15368284)
chr4 (153-284)||(16224007-16224138)
chr4 (146-285)||(20899032-20899171)
chr4 (153-285)||(27028376-27028505)
chr4 (71-285)||(52266107-52266322)
chr4 (153-285)||(16157422-16157553)
chr4 (158-262)||(15403193-15403296)
chr4 (71-312)||(30233095-30233336)
chr4 (153-285)||(15373958-15374090)
chr4 (172-280)||(26921778-26921886)
chr4 (153-288)||(10705357-10705491)
chr4 (153-288)||(10919127-10919261)
chr4 (189-278)||(15214137-15214226)
chr4 (129-269)||(19622552-19622693)
chr4 (187-287)||(5683073-5683173)
chr4 (164-236)||(15371714-15371786)
chr4 (71-285)||(15851942-15852157)
chr4 (170-282)||(7132593-7132704)
chr4 (174-278)||(13043280-13043384)
chr4 (170-282)||(20000340-20000451)
chr4 (170-287)||(17375789-17375906)
chr4 (170-271)||(45314400-45314500)
chr4 (170-287)||(54363791-54363907)
chr4 (187-287)||(18293406-18293506)
chr4 (170-287)||(18168580-18168696)
chr4 (190-288)||(3337994-3338092)
chr4 (190-288)||(9870777-9870875)
chr4 (190-288)||(15990891-15990989)
chr4 (187-287)||(25119754-25119854)
chr4 (77-236)||(15272906-15273065)
chr4 (241-285)||(8574316-8574360)
chr4 (71-140)||(12837775-12837846)
[»] chr6 (46 HSPs)
chr6 (153-323)||(24267434-24267604)
chr6 (153-323)||(5110004-5110174)
chr6 (140-323)||(5289353-5289533)
chr6 (153-323)||(29415846-29416018)
chr6 (123-285)||(18259436-18259598)
chr6 (123-285)||(8226993-8227155)
chr6 (123-285)||(16448037-16448199)
chr6 (123-285)||(23532149-23532311)
chr6 (71-236)||(31467987-31468153)
chr6 (153-262)||(24441309-24441418)
chr6 (71-285)||(25650688-25650903)
chr6 (155-285)||(24563069-24563198)
chr6 (152-285)||(13750567-13750699)
chr6 (77-328)||(26089148-26089399)
chr6 (173-287)||(19174794-19174907)
chr6 (172-287)||(16135917-16136031)
chr6 (153-288)||(29847569-29847703)
chr6 (170-282)||(16231509-16231620)
chr6 (170-282)||(18087350-18087461)
chr6 (77-312)||(15735346-15735580)
chr6 (77-312)||(23994350-23994584)
chr6 (71-286)||(18776608-18776824)
chr6 (190-277)||(25753072-25753159)
chr6 (190-277)||(25755242-25755329)
chr6 (170-276)||(28948208-28948313)
chr6 (68-287)||(22226166-22226387)
chr6 (170-282)||(23977386-23977497)
chr6 (153-288)||(18659059-18659193)
chr6 (184-282)||(18003194-18003292)
chr6 (68-287)||(33314635-33314855)
chr6 (170-278)||(19983821-19983928)
chr6 (190-288)||(19443363-19443461)
chr6 (68-287)||(16376801-16377021)
chr6 (68-287)||(16384125-16384345)
chr6 (170-287)||(16556673-16556789)
chr6 (170-287)||(16633229-16633345)
chr6 (170-287)||(35015687-35015803)
chr6 (170-222)||(7366138-7366190)
chr6 (77-279)||(13621227-13621429)
chr6 (190-288)||(16132753-16132850)
chr6 (190-236)||(25348031-25348077)
chr6 (170-287)||(10488307-10488423)
chr6 (170-287)||(16649903-16650019)
chr6 (123-189)||(19102745-19102811)
chr6 (170-287)||(25904753-25904869)
chr6 (276-328)||(31468149-31468201)
[»] chr1 (28 HSPs)
chr1 (146-328)||(20058067-20058249)
chr1 (123-328)||(7320858-7321062)
chr1 (146-323)||(13527996-13528173)
chr1 (153-323)||(18270913-18271083)
chr1 (153-323)||(18275567-18275737)
chr1 (14-143)||(18853057-18853186)
chr1 (153-285)||(18824246-18824378)
chr1 (153-262)||(21473441-21473550)
chr1 (153-285)||(52983852-52983984)
chr1 (164-284)||(51476618-51476738)
chr1 (170-288)||(51324127-51324244)
chr1 (184-312)||(20825451-20825578)
chr1 (187-278)||(39060977-39061068)
chr1 (188-288)||(21239374-21239474)
chr1 (71-285)||(27330330-27330545)
chr1 (170-287)||(21858901-21859017)
chr1 (170-282)||(17148185-17148296)
chr1 (68-287)||(44035399-44035619)
chr1 (190-288)||(21659996-21660094)
chr1 (187-287)||(16656271-16656371)
chr1 (170-287)||(18060290-18060406)
chr1 (71-280)||(35054239-35054449)
chr1 (172-287)||(17004245-17004359)
chr1 (190-236)||(7791888-7791934)
chr1 (190-236)||(20030972-20031018)
chr1 (68-287)||(38055518-38055738)
chr1 (205-288)||(7791949-7792032)
chr1 (170-236)||(21650572-21650637)
[»] scaffold1276 (1 HSPs)
scaffold1276 (124-323)||(729-928)
[»] chr5 (34 HSPs)
chr5 (14-267)||(432105-432357)
chr5 (146-323)||(10817399-10817576)
chr5 (123-323)||(22357163-22357362)
chr5 (71-293)||(21297566-21297789)
chr5 (7-267)||(23981860-23982120)
chr5 (123-323)||(23539355-23539555)
chr5 (123-293)||(21311162-21311332)
chr5 (153-311)||(8952330-8952487)
chr5 (153-306)||(22777359-22777512)
chr5 (123-285)||(40726317-40726479)
chr5 (123-285)||(18318467-18318629)
chr5 (123-285)||(20765516-20765678)
chr5 (186-328)||(21405932-21406074)
chr5 (71-285)||(21109349-21109564)
chr5 (153-285)||(22007179-22007310)
chr5 (170-278)||(21399113-21399220)
chr5 (170-287)||(20197648-20197764)
chr5 (172-279)||(20711537-20711644)
chr5 (77-282)||(21204384-21204589)
chr5 (170-279)||(9730912-9731020)
chr5 (68-287)||(35581643-35581864)
chr5 (68-287)||(36990198-36990419)
chr5 (170-287)||(1220050-1220166)
chr5 (170-287)||(10778498-10778614)
chr5 (68-287)||(21932809-21933029)
chr5 (68-287)||(21938979-21939199)
chr5 (187-287)||(28901824-28901924)
chr5 (187-287)||(28938219-28938319)
chr5 (170-277)||(23514179-23514285)
chr5 (170-287)||(22883616-22883732)
chr5 (173-285)||(22111598-22111710)
chr5 (185-283)||(21650155-21650253)
chr5 (193-288)||(22470453-22470548)
chr5 (175-212)||(31479254-31479290)
[»] scaffold0117 (2 HSPs)
scaffold0117 (153-328)||(25717-25892)
scaffold0117 (129-285)||(40480-40636)
[»] chr8 (40 HSPs)
chr8 (153-323)||(17611580-17611750)
chr8 (164-285)||(23451097-23451218)
chr8 (123-285)||(26220177-26220339)
chr8 (164-283)||(34302177-34302296)
chr8 (123-285)||(26222546-26222708)
chr8 (168-276)||(24496237-24496345)
chr8 (164-285)||(3273513-3273634)
chr8 (153-256)||(24979771-24979874)
chr8 (77-286)||(20481056-20481266)
chr8 (152-285)||(22583948-22584081)
chr8 (172-285)||(30766220-30766333)
chr8 (170-287)||(17501798-17501914)
chr8 (152-285)||(23889431-23889563)
chr8 (134-287)||(39114725-39114878)
chr8 (170-287)||(4233514-4233630)
chr8 (193-290)||(22532466-22532563)
chr8 (193-290)||(22537151-22537248)
chr8 (170-282)||(13721456-13721567)
chr8 (172-283)||(273896-274007)
chr8 (172-283)||(641842-641953)
chr8 (172-283)||(827648-827759)
chr8 (172-282)||(16039569-16039679)
chr8 (68-287)||(271788-272009)
chr8 (68-287)||(829646-829867)
chr8 (68-287)||(13662692-13662912)
chr8 (170-282)||(16873579-16873690)
chr8 (77-279)||(24386337-24386539)
chr8 (192-288)||(39694611-39694707)
chr8 (170-272)||(24717395-24717496)
chr8 (170-288)||(39364396-39364513)
chr8 (170-279)||(3431810-3431918)
chr8 (68-287)||(22006688-22006908)
chr8 (173-278)||(23809455-23809560)
chr8 (170-287)||(15319690-15319807)
chr8 (170-287)||(15500059-15500176)
chr8 (190-288)||(32950525-32950624)
chr8 (190-288)||(44522508-44522606)
chr8 (170-287)||(643912-644028)
chr8 (146-287)||(24239270-24239412)
chr8 (198-285)||(24624430-24624517)
[»] scaffold1957 (1 HSPs)
scaffold1957 (146-328)||(99-273)
[»] scaffold0025 (1 HSPs)
scaffold0025 (68-323)||(146015-146272)
[»] scaffold0181 (1 HSPs)
scaffold0181 (146-294)||(25804-25952)
[»] scaffold0065 (1 HSPs)
scaffold0065 (7-143)||(68226-68362)
[»] scaffold0447 (4 HSPs)
scaffold0447 (71-328)||(3978-4237)
scaffold0447 (71-328)||(8592-8851)
scaffold0447 (190-288)||(7476-7574)
scaffold0447 (190-288)||(12090-12188)
[»] scaffold0383 (2 HSPs)
scaffold0383 (71-328)||(6586-6845)
scaffold0383 (190-288)||(10085-10183)
[»] scaffold0273 (1 HSPs)
scaffold0273 (153-286)||(7304-7437)
[»] scaffold0023 (2 HSPs)
scaffold0023 (14-267)||(61589-61841)
scaffold0023 (68-287)||(154434-154654)
[»] scaffold0018 (1 HSPs)
scaffold0018 (14-236)||(51538-51759)
[»] scaffold0720 (1 HSPs)
scaffold0720 (152-285)||(733-866)
[»] scaffold0149 (1 HSPs)
scaffold0149 (153-284)||(35833-35964)
[»] scaffold0234 (1 HSPs)
scaffold0234 (173-323)||(18080-18230)
[»] scaffold0303 (1 HSPs)
scaffold0303 (77-328)||(592-843)
[»] scaffold0342 (2 HSPs)
scaffold0342 (71-328)||(5352-5610)
scaffold0342 (68-287)||(876-1096)
[»] scaffold0377 (1 HSPs)
scaffold0377 (164-285)||(16405-16526)
[»] scaffold0962 (1 HSPs)
scaffold0962 (153-285)||(906-1038)
[»] scaffold0429 (1 HSPs)
scaffold0429 (123-311)||(2260-2447)
[»] scaffold0107 (2 HSPs)
scaffold0107 (159-285)||(3519-3645)
scaffold0107 (68-287)||(30917-31137)
[»] scaffold0244 (1 HSPs)
scaffold0244 (77-328)||(23096-23348)
[»] scaffold0017 (3 HSPs)
scaffold0017 (164-285)||(817-938)
scaffold0017 (183-285)||(7586-7688)
scaffold0017 (170-288)||(26364-26480)
[»] scaffold0008 (1 HSPs)
scaffold0008 (129-285)||(72283-72439)
[»] scaffold0175 (2 HSPs)
scaffold0175 (146-285)||(18474-18613)
scaffold0175 (77-282)||(14410-14610)
[»] scaffold0123 (2 HSPs)
scaffold0123 (153-312)||(1560-1717)
scaffold0123 (170-288)||(6898-7015)
[»] scaffold0706 (1 HSPs)
scaffold0706 (174-328)||(7228-7382)
[»] scaffold0174 (4 HSPs)
scaffold0174 (212-328)||(15991-16107)
scaffold0174 (123-215)||(19402-19494)
scaffold0174 (259-323)||(4944-5008)
scaffold0174 (259-321)||(11066-11128)
[»] scaffold0022 (1 HSPs)
scaffold0022 (123-285)||(117054-117216)
[»] scaffold0037 (4 HSPs)
scaffold0037 (123-312)||(118066-118254)
scaffold0037 (123-282)||(113232-113391)
scaffold0037 (172-321)||(94393-94542)
scaffold0037 (225-283)||(25433-25491)
[»] scaffold0309 (2 HSPs)
scaffold0309 (153-285)||(8765-8896)
scaffold0309 (239-285)||(6613-6659)
[»] scaffold0371 (1 HSPs)
scaffold0371 (164-285)||(3503-3624)
[»] scaffold0331 (1 HSPs)
scaffold0331 (146-285)||(4333-4469)
[»] scaffold2046 (1 HSPs)
scaffold2046 (152-285)||(817-949)
[»] scaffold0490 (1 HSPs)
scaffold0490 (153-285)||(5510-5641)
[»] scaffold0247 (1 HSPs)
scaffold0247 (153-285)||(17541-17672)
[»] scaffold0003 (1 HSPs)
scaffold0003 (224-328)||(146982-147086)
[»] scaffold0453 (1 HSPs)
scaffold0453 (153-312)||(3716-3874)
[»] scaffold0251 (2 HSPs)
scaffold0251 (77-312)||(13980-14214)
scaffold0251 (172-236)||(22048-22112)
[»] scaffold0077 (2 HSPs)
scaffold0077 (244-321)||(14741-14818)
scaffold0077 (68-236)||(16048-16217)
[»] scaffold0047 (1 HSPs)
scaffold0047 (167-312)||(76788-76932)
[»] scaffold0521 (1 HSPs)
scaffold0521 (123-287)||(8379-8543)
[»] scaffold0269 (1 HSPs)
scaffold0269 (68-287)||(16068-16288)
[»] scaffold0574 (1 HSPs)
scaffold0574 (184-312)||(10207-10334)
[»] scaffold0034 (3 HSPs)
scaffold0034 (68-278)||(79321-79532)
scaffold0034 (170-287)||(40134-40250)
scaffold0034 (170-287)||(45617-45733)
[»] scaffold0261 (1 HSPs)
scaffold0261 (172-285)||(6690-6803)
[»] scaffold0016 (1 HSPs)
scaffold0016 (170-287)||(166773-166890)
[»] scaffold0126 (1 HSPs)
scaffold0126 (152-288)||(6672-6807)
[»] scaffold0042 (1 HSPs)
scaffold0042 (193-288)||(51831-51926)
[»] scaffold0083 (3 HSPs)
scaffold0083 (187-288)||(11082-11184)
scaffold0083 (187-287)||(60-160)
scaffold0083 (187-287)||(5364-5464)
[»] scaffold0080 (2 HSPs)
scaffold0080 (187-288)||(29605-29706)
scaffold0080 (187-288)||(35070-35171)
[»] scaffold0825 (1 HSPs)
scaffold0825 (190-288)||(716-814)
[»] scaffold0597 (1 HSPs)
scaffold0597 (172-286)||(1666-1780)
[»] scaffold0125 (1 HSPs)
scaffold0125 (189-287)||(28173-28271)
[»] scaffold0113 (1 HSPs)
scaffold0113 (170-288)||(35113-35230)
[»] scaffold0184 (1 HSPs)
scaffold0184 (170-287)||(31810-31926)
[»] scaffold0078 (1 HSPs)
scaffold0078 (170-287)||(40918-41034)
[»] scaffold0039 (1 HSPs)
scaffold0039 (170-287)||(19589-19705)
[»] scaffold0452 (1 HSPs)
scaffold0452 (134-287)||(3248-3401)
[»] scaffold0106 (1 HSPs)
scaffold0106 (170-288)||(21606-21723)
[»] scaffold0686 (1 HSPs)
scaffold0686 (170-287)||(6613-6730)
[»] scaffold0256 (1 HSPs)
scaffold0256 (190-271)||(2175-2256)
[»] scaffold0076 (1 HSPs)
scaffold0076 (68-287)||(38711-38931)
[»] scaffold0103 (1 HSPs)
scaffold0103 (170-278)||(33125-33232)
[»] scaffold0465 (1 HSPs)
scaffold0465 (172-283)||(10652-10763)
[»] scaffold0456 (2 HSPs)
scaffold0456 (170-236)||(2060-2125)
scaffold0456 (170-236)||(9205-9270)
[»] scaffold0409 (2 HSPs)
scaffold0409 (170-287)||(1839-1954)
scaffold0409 (170-287)||(10094-10209)
[»] scaffold0205 (1 HSPs)
scaffold0205 (175-271)||(1543-1639)
[»] scaffold0032 (1 HSPs)
scaffold0032 (172-286)||(55034-55148)


Alignment Details
Target: chr7 (Bit Score: 149; Significance: 1e-78; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 123 - 323
Target Start/End: Complemental strand, 13256481 - 13256281
Alignment:
Q  123 ttttgaaaatgagtgtttatgcaaggttctggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagc 222  Q
    ||||| |||| |||| |||||  ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13256481 ttttgcaaataagtgattatgtgaggttctggaaatcgattttttggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagc 13256382  T
Q  223 gtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtcaggcagaaatc 322  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||||||  |||||||||    
T  13256381 gtgtaggcgaaaacaacatcgaaaacgggttaacggtttagattttacgcgcgaaaacgtgaaaattagaaaatctgatgttgtctgtcgagcagaaatc 13256282  T
Q  323 g 323  Q
    |    
T  13256281 g 13256281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 146 - 323
Target Start/End: Complemental strand, 37380647 - 37380469
Alignment:
Q  146 aggttctggaaatcgatatttgggtggttgaaa-cttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcga 244  Q
    ||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||    
T  37380647 aggttctggaaatcgagttttgggtggttgaaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgcgtaggcgaaaacgacattga 37380548  T
Q  245 aaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtcaggcagaaatcg 323  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||  ||||||||||    
T  37380547 aaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattagaaaatctgatgttgtctgtcgagcagaaatcg 37380469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 146 - 311
Target Start/End: Original strand, 17467668 - 17467834
Alignment:
Q  146 aggttctggaaatcgatatttgggtggttgaaa-cttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcga 244  Q
    ||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||    
T  17467668 aggttctggaaatcgagttttgggtggttgaaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgcgtaggcgaaaacggcatcga 17467767  T
Q  245 aaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtc 311  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||    
T  17467768 aaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattagaaaatctgatgttgtctgtc 17467834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 146 - 311
Target Start/End: Complemental strand, 17585546 - 17585380
Alignment:
Q  146 aggttctggaaatcgatatttgggtggttgaaa-cttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcga 244  Q
    ||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||    
T  17585546 aggttctggaaatcgagttttgggtggttgaaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgcgtaggcgaaaacggcatcga 17585447  T
Q  245 aaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtc 311  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||    
T  17585446 aaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattagaaaatctgatgttgtctgtc 17585380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 71 - 328
Target Start/End: Original strand, 13866341 - 13866599
Alignment:
Q  71 gagtcgtttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccattttg--aaaatgagtgtttatgcaaggttctggaaatcgatatttgg 168  Q
    ||||||||||||||||| ||||||||||| |||||| ||| ||| | |||| |||||  ||||||||||||| || |||| | ||||||  ||  || ||    
T  13866341 gagtcgtttgggagaaatcgagagtttcgggtgaaaattcaattgttaaccgttttggaaaaatgagtgtttgtgtaaggctttggaaaatgaatttggg 13866440  T
Q  169 gtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttt 268  Q
    || |||||| || ||||||||| |||  ||| |||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||| ||||    
T  13866441 gttgttgaa-ctggaatttttcggtactttaagatagagctaagtgtcaggagcgtgtaggcgaaaacgacatcgaaaacagtttaacggtttggttttt 13866539  T
Q  269 acgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtcaggcagaaatcgtacta 328  Q
    ||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||| ||||    
T  13866540 acgcgcgaaaacgtgaaaattggaaaatctgatgtggtctgtcaggcagaaatcggacta 13866599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 172 - 331
Target Start/End: Complemental strand, 3049154 - 3048995
Alignment:
Q  172 gttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacg 271  Q
    ||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||||||||||  |||||||||| |||||||||||||| ||||||     
T  3049154 gttgaaacttgaatttttctgtacattaagatagggctaagtgtcaggagcgtgtaggcgaaaacggcatcgaaaacaggttaacggtttggtttttact 3049055  T
Q  272 cgcgaaaacgtgaaaattggaaaaactgttgttgtctgtcaggcagaaatcgtactatga 331  Q
    |||||||||||||||||||||||| ||| ||||||||||||| |||||||||| ||||||    
T  3049054 cgcgaaaacgtgaaaattggaaaatctgatgttgtctgtcagacagaaatcgtgctatga 3048995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 123 - 285
Target Start/End: Complemental strand, 48274270 - 48274108
Alignment:
Q  123 ttttgaaaatgagtgtttatgcaaggttctggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagc 222  Q
    ||||| ||||||||| |||||  ||||| |||||| |||| ||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||    
T  48274270 ttttgcaaatgagtgattatgtgaggttttggaaaccgatttttgggtggttgaaactggaatttttctgtagattgtgatagagctatgtgtcaggagc 48274171  T
Q  223 gtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 285  Q
    | ||||||||||||  ||||||||||||||||| ||||||| ||||| |||||||||||||||    
T  48274170 gcgtaggcgaaaacggcatcgaaaacgggttaatggtttggtttttaggcgcgaaaacgtgaa 48274108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 123 - 295
Target Start/End: Original strand, 3289021 - 3289193
Alignment:
Q  123 ttttgaaaatgagtgtttatgcaaggttctggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagc 222  Q
    ||||| |||| |||| |||||  |||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |    
T  3289021 ttttgcaaataagtgattatgtgaggttctgaaaatcgatttttgggtggttgaaacttgaaattttctgtagattatgatagagctaagtgtcaggaac 3289120  T
Q  223 gtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaa 295  Q
    |||||||| |||||  ||||||||| ||||||||  ||||||||||| ||||||||| |||||| || |||||    
T  3289121 gtgtaggcaaaaacggcatcgaaaatgggttaacaatttggattttatgcgcgaaaatgtgaaagttagaaaa 3289193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 129 - 285
Target Start/End: Original strand, 19486233 - 19486389
Alignment:
Q  129 aaatgagtgtttatgcaaggttctggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtag 228  Q
    |||| |||| |||||  ||||| |||||| |||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  19486233 aaataagtgattatgtgaggttttggaaaccgatttttgggtggtttaaacttgaatttttctatagattatgatagagctaagtgtcaggagcgtgtag 19486332  T
Q  229 gcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 285  Q
    ||||||||  |||||||||||||||||||| |||| ||||| | |||||||||||||    
T  19486333 gcgaaaacggcatcgaaaacgggttaacggattggtttttatgagcgaaaacgtgaa 19486389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 153 - 285
Target Start/End: Complemental strand, 4280881 - 4280750
Alignment:
Q  153 ggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggt 252  Q
    |||||||||| ||||| | |||||||||| | |||||| ||||||||||||||||||| || ||| ||||||||||||||||||  ||||||||||||||    
T  4280881 ggaaatcgatttttgg-tagttgaaactttagtttttcggtagattatgatagagctatgtctcatgagcgtgtaggcgaaaacggcatcgaaaacgggt 4280783  T
Q  253 taacggtttggattttacgcgcgaaaacgtgaa 285  Q
    |||||||| || |||||||||||||||||||||    
T  4280782 taacggttgggtttttacgcgcgaaaacgtgaa 4280750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 153 - 281
Target Start/End: Original strand, 21734710 - 21734841
Alignment:
Q  153 ggaaatcgatatttgggtggttgaaacttgaatttttct----gtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaac 248  Q
    |||||||||| ||||| |||||||||||||||||||| |    |||||||||||||||||||||| |||||||||| |||||||||||  ||||||||||    
T  21734710 ggaaatcgat-tttggttggttgaaacttgaatttttttttcggtagattatgatagagctaagtctcaggagcgtttaggcgaaaacggcatcgaaaac 21734808  T
Q  249 gggttaacggtttggattttacgcgcgaaaacg 281  Q
    ||||||||||||||| ||||| ||| |||||||    
T  21734809 gggttaacggtttggtttttatgcgtgaaaacg 21734841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 153 - 269
Target Start/End: Original strand, 21734151 - 21734269
Alignment:
Q  153 ggaaatcgatatttgggtggttgaaacttgaatttttct---gtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacg 249  Q
    |||||||||| ||||| |||||||||||||||||||| |   |||||||||||||||||||||| |||||||||| |||||||||||  |||||||||||    
T  21734151 ggaaatcgat-tttggttggttgaaacttgaattttttttcggtagattatgatagagctaagtctcaggagcgtttaggcgaaaacggcatcgaaaacg 21734249  T
Q  250 ggttaacggtttggatttta 269  Q
    |||||||||||||| |||||    
T  21734250 ggttaacggtttggttttta 21734269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 164 - 312
Target Start/End: Complemental strand, 11054458 - 11054311
Alignment:
Q  164 tttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttgg 263  Q
    |||||||||||||||||||||||||||| || |||||||||| |||||||||||||| | | |||| ||||||  |||||||||| | |||||||||||     
T  11054458 tttgggtggttgaaacttgaatttttctatatattatgatagggctaagtgtcaggaacatataggtgaaaacggcatcgaaaacagattaacggtttga 11054359  T
Q  264 attttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtca 312  Q
     ||||| |||||||||||||||  || ||||| ||| ||||||||||||    
T  11054358 tttttatgcgcgaaaacgtgaaggtt-gaaaatctgatgttgtctgtca 11054311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 77 - 312
Target Start/End: Original strand, 42056883 - 42057117
Alignment:
Q  77 tttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccattttg-aaaatgagtgtttatgcaaggttctggaaatcgatatttg-ggtggtt 174  Q
    ||||| |||||||| ||||||||| ||||| ||| ||| | |||| ||||| ||||||||||||| ||  ||||| || |||  || ||||| ||| |||    
T  42056883 tttggaagaaaacgggagtttcgtttgaaaattcaattgttaaccgttttggaaaatgagtgtttgtgtgaggtt-tgtaaaatga-atttgaggttgtt 42056980  T
Q  175 gaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgc 274  Q
     ||||| | ||||||||||  |||||||||| ||||||||| |||||| |||||| |||||| ||||||||||||| |||||||||||  ||||| ||||    
T  42056981 aaaactaggatttttctgtgcattatgatagtgctaagtgttaggagcatgtaggtgaaaacgacatcgaaaacggattaacggtttgatttttatgcgc 42057080  T
Q  275 gaaaacgtgaaaattggaaaaactgttgttgtctgtca 312  Q
    |||||||| | || | ||||| ||| ||||||||||||    
T  42057081 gaaaacgt-agaagttgaaaatctgatgttgtctgtca 42057117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 170 - 278
Target Start/End: Complemental strand, 28720439 - 28720332
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    ||||||| ||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||  |||| ||| | | ||||||||||| ||||||    
T  28720439 tggttgagacttgaaattt-ctgtagattatgatagagccaagtgtcaggagcgtgtaggcgaaaacggcatcaaaatccgattaacggtttgaatttta 28720341  T
Q  270 cgcgcgaaa 278  Q
    |||||||||    
T  28720340 cgcgcgaaa 28720332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 153 - 288
Target Start/End: Original strand, 40554808 - 40554942
Alignment:
Q  153 ggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggt 252  Q
    |||||||||| || |||||||||| ||||||| |   ||||||||||||||||||| |||||||||||| ||||||||||||||| |||| ||| | | |    
T  40554808 ggaaatcgattttggggtggttgagacttgaaatag-ctgtagattatgatagagccaagtgtcaggagagtgtaggcgaaaacagcatcaaaatccgat 40554906  T
Q  253 taacggtttggattttacgcgcgaaaacgtgaaaat 288  Q
    |||||||||| |||||||| ||||||  ||||||||    
T  40554907 taacggtttgaattttacgtgcgaaatggtgaaaat 40554942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 175 - 285
Target Start/End: Original strand, 37784671 - 37784781
Alignment:
Q  175 gaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgc 274  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| | |||||| ||||||  |||||||||| | |||||||||||  ||||| | ||    
T  37784671 gaaacttgaatttttctgtagattatgatagggctaagtgtcaggaacatgtaggtgaaaacggcatcgaaaacagattaacggtttgatttttatgagc 37784770  T
Q  275 gaaaacgtgaa 285  Q
    ||||| |||||    
T  37784771 gaaaatgtgaa 37784781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 170 - 282
Target Start/End: Complemental strand, 370815 - 370704
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    |||||||||| |||| |||| ||||||||||||||| || |||||| |||||| |||||||||||||  |||||||||||| |||||||||||  |||||    
T  370815 tggttgaaacatgaaatttt-tgtagattatgatagtgccaagtgttaggagcatgtaggcgaaaacggcatcgaaaacggattaacggtttgattttta 370717  T
Q  270 cgcgcgaaaacgt 282  Q
     ||||||||||||    
T  370716 tgcgcgaaaacgt 370704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 69 - 287
Target Start/End: Complemental strand, 16383588 - 16383369
Alignment:
Q  69 ttgagtcgtttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccatttt-gaaaatgagtgtttatgcaaggttctggaaatcgatatttg 167  Q
    |||||||||||||||||||||| |  ||||||||||||  |||||  | || |||||| |  ||| |||| |||||  ||||| ||||||  ||| ||||    
T  16383588 ttgagtcgtttgggagaaaacgggtttttcgtgtgaaatgtcgatgtttaagcattttcgtcaataagtgattatgtgaggttttggaaaatgatttttg 16383489  T
Q  168 gg-tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatt 266  Q
    || |||||||||||| || |||| ||||||||||||||||| | ||||| |||| ||||||||||||||| ||||| ||| | | |||| |||||| |||    
T  16383488 ggatggttgaaactttaaatttt-tgtagattatgatagagtttagtgttaggaacgtgtaggcgaaaacgacatcaaaatccgattaatggtttgaatt 16383390  T
Q  267 ttacgcgcgaaaacgtgaaaa 287  Q
    ||| ||||||||  |||||||    
T  16383389 ttatgcgcgaaatggtgaaaa 16383369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 153 - 288
Target Start/End: Original strand, 8756440 - 8756574
Alignment:
Q  153 ggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggt 252  Q
    |||||||||| || |||||||||| ||||||| |   || ||| |||||||||||| |||||||||||| |||||||||||||| ||||| ||| | | |    
T  8756440 ggaaatcgattttggggtggttgagacttgaaataa-ctataggttatgatagagccaagtgtcaggagagtgtaggcgaaaacgacatcaaaatccgat 8756538  T
Q  253 taacggtttggattttacgcgcgaaaacgtgaaaat 288  Q
    |||||||||| |||||||||||||||  ||||||||    
T  8756539 taacggtttgaattttacgcgcgaaatggtgaaaat 8756574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 186 - 285
Target Start/End: Original strand, 10063205 - 10063304
Alignment:
Q  186 ttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 285  Q
    |||| |||||||| |||||||||||||||||||||| | ||||| ||||||  |||||||||||||||||||||| |  ||||| |||||||||||||||    
T  10063205 ttttatgtagattgtgatagagctaagtgtcaggagtgcgtaggtgaaaacggcatcgaaaacgggttaacggttcgatttttaggcgcgaaaacgtgaa 10063304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 172 - 282
Target Start/End: Original strand, 2190864 - 2190974
Alignment:
Q  172 gttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacg 271  Q
    ||||||||| | ||||||||||  |||||||||| ||||||||| |||||| |||||||||||||  |||||||||||  |||||||||||  ||||| |    
T  2190864 gttgaaactgggatttttctgtgcattatgatagtgctaagtgttaggagcatgtaggcgaaaacggcatcgaaaacgaattaacggtttgatttttatg 2190963  T
Q  272 cgcgaaaacgt 282  Q
    |||||||||||    
T  2190964 cgcgaaaacgt 2190974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 170 - 282
Target Start/End: Complemental strand, 13758098 - 13757987
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    |||||||||| |||| |||| |||| |||||||||| || |||||| |||||| |||||||||||||  |||||||||||| |||||||||||  |||||    
T  13758098 tggttgaaacatgaaatttt-tgtaaattatgatagtgccaagtgttaggagcatgtaggcgaaaacggcatcgaaaacggattaacggtttgattttta 13758000  T
Q  270 cgcgcgaaaacgt 282  Q
     ||||||||||||    
T  13757999 tgcgcgaaaacgt 13757987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 170 - 282
Target Start/End: Original strand, 14251426 - 14251537
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    |||||||||| |||| |||| |||||||||| |||| || |||||| |||||| |||||||||||||  |||||||||||| |||||||||||  |||||    
T  14251426 tggttgaaacatgaaatttt-tgtagattataatagtgccaagtgttaggagcatgtaggcgaaaacggcatcgaaaacggattaacggtttgattttta 14251524  T
Q  270 cgcgcgaaaacgt 282  Q
     ||||||||||||    
T  14251525 tgcgcgaaaacgt 14251537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 170 - 287
Target Start/End: Original strand, 15951319 - 15951435
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    |||||||||| |||| |||| ||||||||||| |||||  |||||||| |||||||||||||||||| ||||| ||| | | ||||||||||| ||||||    
T  15951319 tggttgaaacatgaaatttt-tgtagattatgttagagtcaagtgtcaagagcgtgtaggcgaaaacgacatcaaaatccgattaacggtttgaatttta 15951417  T
Q  270 cgcgcgaaaacgtgaaaa 287  Q
    || ||||||  |||||||    
T  15951418 cgtgcgaaatggtgaaaa 15951435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 287
Target Start/End: Original strand, 32494630 - 32494850
Alignment:
Q  68 gttgagtcgtttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccatttt-gaaaatgagtgtttatgcaaggttctggaaatcgatattt 166  Q
    ||||||||||||||||||||||| |  ||||||||||||  |||||  | || |  ||| |  ||| ||||||||||  ||||| ||||||  ||  |||    
T  32494630 gttgagtcgtttgggagaaaacgggtttttcgtgtgaaatgtcgatgtttaagcgctttcgccaataagtgtttatgtgaggttttggaaaatgactttt 32494729  T
Q  167 ggg-tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggat 265  Q
    ||| |||||||||| || | |||| ||||||||||| |||||  |||||||| ||||||||||||||||||  |||| ||| | | ||||||||||| ||    
T  32494730 gggatggttgaaacatggaatttt-tgtagattatgttagagtcaagtgtcatgagcgtgtaggcgaaaacggcatcaaaatccgattaacggtttgaat 32494828  T
Q  266 tttacgcgcgaaaacgtgaaaa 287  Q
    |||||||||||||  |||||||    
T  32494829 tttacgcgcgaaatggtgaaaa 32494850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 175 - 278
Target Start/End: Original strand, 3170734 - 3170836
Alignment:
Q  175 gaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgc 274  Q
    ||||| ||||||||| |||||| | |||||||||||||| | |||| ||||||||||||||||  ||||||||||  ||||| ||||| |||||||||||    
T  3170734 gaaacatgaattttt-tgtagaatgtgatagagctaagtttaaggaacgtgtaggcgaaaacagaatcgaaaacgaattaacagtttgaattttacgcgc 3170832  T
Q  275 gaaa 278  Q
    ||||    
T  3170833 gaaa 3170836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 172 - 282
Target Start/End: Original strand, 26070944 - 26071054
Alignment:
Q  172 gttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacg 271  Q
    ||||||||||||||||||||||| |||| ||||| ||||||||||| || |  ||||| |||||   |||||||||| | |||||||||||  ||||| |    
T  26070944 gttgaaacttgaatttttctgtacattaagatagggctaagtgtcatgaacacgtaggtgaaaatggcatcgaaaacagattaacggtttgatttttatg 26071043  T
Q  272 cgcgaaaacgt 282  Q
    |||||||||||    
T  26071044 cgcgaaaacgt 26071054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 172 - 282
Target Start/End: Original strand, 26094731 - 26094841
Alignment:
Q  172 gttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacg 271  Q
    ||||||||||||||||||||||| |||| ||||| ||||||||||| || |  ||||| |||||   |||||||||| | |||||||||||  ||||| |    
T  26094731 gttgaaacttgaatttttctgtacattaagatagggctaagtgtcatgaacacgtaggtgaaaatggcatcgaaaacagattaacggtttgatttttatg 26094830  T
Q  272 cgcgaaaacgt 282  Q
    |||||||||||    
T  26094831 cgcgaaaacgt 26094841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 172 - 283
Target Start/End: Original strand, 111955 - 112066
Alignment:
Q  172 gttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacg 271  Q
    ||||||||||||||||||||||| | || ||||| ||||||||||| || |  ||||| ||||||  ||| |||||||| |||||||||||  | ||| |    
T  111955 gttgaaacttgaatttttctgtacactaagatagggctaagtgtcatgaacacgtaggtgaaaacggcattgaaaacggattaacggtttgattattatg 112054  T
Q  272 cgcgaaaacgtg 283  Q
    ||||||||||||    
T  112055 cgcgaaaacgtg 112066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 191 - 290
Target Start/End: Original strand, 13698971 - 13699070
Alignment:
Q  191 tgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattg 290  Q
    ||||||||||||||| || |||||||||||| ||||||||||||||  |||| ||| |   ||||||||||| ||||||||| |||||  ||||||||||    
T  13698971 tgtagattatgatagcgccaagtgtcaggagagtgtaggcgaaaacggcatcaaaatccaattaacggtttgaattttacgcacgaaatggtgaaaattg 13699070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 77 - 282
Target Start/End: Original strand, 15525159 - 15525364
Alignment:
Q  77 tttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccattttg-aaaatgagtgtttatgcaaggttctggaaatcgatatttg-ggtggtt 174  Q
    |||||||||||||| ||||||||| ||||| |||  || | |||| ||||| ||||||||||||| ||  ||| | || |||  || ||||| ||| |||    
T  15525159 tttgggagaaaacgggagtttcgtttgaaaattcatttgttaaccgttttggaaaatgagtgtttgtgtgaggct-tgtaaaatga-atttgaggttgtt 15525256  T
Q  175 gaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgc 274  Q
    |||||| | ||||||||||  ||||||||||  |||||||| |||||  |||||||||||||  ||| | |||||| |||||||||||  ||||| ||||    
T  15525257 gaaactgggatttttctgtgcattatgatagtactaagtgttaggagaatgtaggcgaaaacggcattgcaaacggattaacggtttgatttttatgcgc 15525356  T
Q  275 gaaaacgt 282  Q
    ||||||||    
T  15525357 gaaaacgt 15525364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 170 - 280
Target Start/End: Complemental strand, 15927296 - 15927186
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaa-caacatcgaaaacgggttaacggtttggatttt 268  Q
    |||||||||| |||| |||| ||||||||||||||| || |||| | |||||| |||||||||||| |  |||||||||||| |||||||||||  ||||    
T  15927296 tggttgaaacatgaaatttt-tgtagattatgatagtgccaagtattaggagcatgtaggcgaaaaacggcatcgaaaacggattaacggtttgattttt 15927198  T
Q  269 acgcgcgaaaac 280  Q
    | ||||||||||    
T  15927197 atgcgcgaaaac 15927186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 172 - 282
Target Start/End: Complemental strand, 2028488 - 2028378
Alignment:
Q  172 gttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacg 271  Q
    |||||||||||| |||||||||| |||| ||||| |||||||||||  | |  ||||| ||||||  |||||||||| | |||||||||||  ||||| |    
T  2028488 gttgaaacttgactttttctgtacattaagatagggctaagtgtcataaacaagtaggtgaaaacggcatcgaaaacagattaacggtttgatttttatg 2028389  T
Q  272 cgcgaaaacgt 282  Q
    |||||||||||    
T  2028388 cgcgaaaacgt 2028378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 288
Target Start/End: Complemental strand, 13898196 - 13898098
Alignment:
Q  190 ctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 288  Q
    ||||||||||||||||||| |||||||||||| ||||||| ||||||  |||| |||   | ||||||||| | |||||||||||||||  ||||||||    
T  13898196 ctgtagattatgatagagccaagtgtcaggagagtgtaggagaaaacggcatcaaaattcgattaacggttggaattttacgcgcgaaatggtgaaaat 13898098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 170 - 288
Target Start/End: Complemental strand, 29004811 - 29004694
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    ||||||| ||||||| || | ||||||||| |||||||| |||||| ||||||||||||||||||||  || | ||| | | ||||||||||| |||||     
T  29004811 tggttgagacttgaaattgt-tgtagattaagatagagcaaagtgttaggagcgtgtaggcgaaaacggcaccaaaatccgattaacggtttgaattttt 29004713  T
Q  270 cgcgcgaaaacgtgaaaat 288  Q
    |||||||||  ||||||||    
T  29004712 cgcgcgaaatggtgaaaat 29004694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 68 - 287
Target Start/End: Original strand, 27102065 - 27102285
Alignment:
Q  68 gttgagtcgtttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccatttt-gaaaatgagtgtttatgcaaggttctggaaatcgatattt 166  Q
    ||||||||||||||||||||||| |  ||||||||||||  |||||  | || | |||| |  ||| |||| |||||  ||||| ||||||  ||  |||    
T  27102065 gttgagtcgtttgggagaaaacgggtttttcgtgtgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaatgactttt 27102164  T
Q  167 ggg-tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggat 265  Q
    ||| |||||||||| |||| |||| | ||||||||| |||||  ||||||||||| | |||||| ||||||  |||| ||| | | ||||||||||| ||    
T  27102165 gggatggttgaaacatgaaatttt-tatagattatgttagagtcaagtgtcaggatcatgtaggtgaaaacggcatcaaaatccgattaacggtttgcat 27102263  T
Q  266 tttacgcgcgaaaacgtgaaaa 287  Q
    |||||||||||||  |||||||    
T  27102264 tttacgcgcgaaatggtgaaaa 27102285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 68 - 287
Target Start/End: Original strand, 27109413 - 27109633
Alignment:
Q  68 gttgagtcgtttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccatttt-gaaaatgagtgtttatgcaaggttctggaaatcgatattt 166  Q
    ||||||||||||||||||||||| |  ||||||||||||  |||||  | || | |||| |  ||| |||| |||||  ||||| ||||||  ||  |||    
T  27109413 gttgagtcgtttgggagaaaacgggtttttcgtgtgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaatgactttt 27109512  T
Q  167 ggg-tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggat 265  Q
    ||| |||||||||| |||| |||| | ||||||||| |||||  ||||||||||| | |||||| ||||||  |||| ||| | | ||||||||||| ||    
T  27109513 gggatggttgaaacatgaaatttt-tatagattatgttagagtcaagtgtcaggatcatgtaggtgaaaacggcatcaaaatccgattaacggtttgcat 27109611  T
Q  266 tttacgcgcgaaaacgtgaaaa 287  Q
    |||||||||||||  |||||||    
T  27109612 tttacgcgcgaaatggtgaaaa 27109633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 170 - 282
Target Start/End: Original strand, 18980548 - 18980659
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    |||||| ||| |||| |||| ||||||||||||||| || |||||| |||||| |||||| ||||||  ||||||||| || |||||||||||  ||| |    
T  18980548 tggttggaacatgaaatttt-tgtagattatgatagtgccaagtgttaggagcatgtaggtgaaaactgcatcgaaaatggattaacggtttgattttaa 18980646  T
Q  270 cgcgcgaaaacgt 282  Q
     ||||||||||||    
T  18980647 tgcgcgaaaacgt 18980659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 170 - 288
Target Start/End: Complemental strand, 33001902 - 33001787
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    ||||||| ||||||| ||| || ||||||||||||||||   |||||||||| ||||||||||||||  |||| ||| | | ||||||| ||| ||||||    
T  33001902 tggttgagacttgaaattt-ctatagattatgatagagcc--gtgtcaggagagtgtaggcgaaaacggcatcaaaatccgattaacggcttgaatttta 33001806  T
Q  270 cgcgcgaaaacgtgaaaat 288  Q
    |||||||||  ||||||||    
T  33001805 cgcgcgaaatggtgaaaat 33001787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 170 - 236
Target Start/End: Complemental strand, 48744272 - 48744207
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaac 236  Q
    ||||||| ||||||| || | ||||||||| ||||||||||| ||||||||||||||||||||||||    
T  48744272 tggttgagacttgaaattgt-tgtagattaagatagagctaactgtcaggagcgtgtaggcgaaaac 48744207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 287
Target Start/End: Complemental strand, 7822452 - 7822336
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    |||||||||| |||| |||| | ||||||||| |||||  ||||||||||| | |||||| ||||||  |||| ||| | | ||||||||||| ||||||    
T  7822452 tggttgaaacatgaaatttt-tatagattatgttagagtcaagtgtcaggatcatgtaggtgaaaacggcatcaaaatccgattaacggtttgcatttta 7822354  T
Q  270 cgcgcgaaaacgtgaaaa 287  Q
    |||||||||  |||||||    
T  7822353 cgcgcgaaatggtgaaaa 7822336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 287
Target Start/End: Complemental strand, 7829763 - 7829647
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    |||||||||| |||| |||| | ||||||||| |||||  ||||||||||| | |||||| ||||||  |||| ||| | | ||||||||||| ||||||    
T  7829763 tggttgaaacatgaaatttt-tatagattatgttagagtcaagtgtcaggatcatgtaggtgaaaacggcatcaaaatccgattaacggtttgcatttta 7829665  T
Q  270 cgcgcgaaaacgtgaaaa 287  Q
    |||||||||  |||||||    
T  7829664 cgcgcgaaatggtgaaaa 7829647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 167 - 312
Target Start/End: Complemental strand, 25124029 - 25123885
Alignment:
Q  167 gggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatt 266  Q
    |||| |||||||||  |||||||||||  |||||||||| | |||| || |||||| |||  | ||||||  | |||||||||| |||||||||||  ||    
T  25124029 gggttgttgaaactgaaatttttctgtgcattatgatagtgttaagagttaggagcatgtgagtgaaaacggcgtcgaaaacggattaacggtttgattt 25123930  T
Q  267 ttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtca 312  Q
    ||| |||||||||||| | || | ||||| ||| ||||||||||||    
T  25123929 ttatgcgcgaaaacgt-agaagttgaaaatctgatgttgtctgtca 25123885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 287
Target Start/End: Complemental strand, 27176157 - 27176041
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    |||||||||| |||| |||| | ||||||||| |||||  ||||||||||| | |||||| ||||||  |||| ||| | | ||||||||||| ||||||    
T  27176157 tggttgaaacatgaaatttt-tatagattatgttagagtcaagtgtcaggatcatgtaggtgaaaacggcatcaaaatccgattaacggtttgcatttta 27176059  T
Q  270 cgcgcgaaaacgtgaaaa 287  Q
    |||||||||  |||||||    
T  27176058 cgcgcgaaatggtgaaaa 27176041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 287
Target Start/End: Original strand, 38784261 - 38784377
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    |||||||||| |||| |||| | ||||||||| |||||  ||||||||||| | |||||| ||||||  |||| ||| | | ||||||||||| ||||||    
T  38784261 tggttgaaacatgaaatttt-tatagattatgttagagtcaagtgtcaggatcatgtaggtgaaaacggcatcaaaatccgattaacggtttgcatttta 38784359  T
Q  270 cgcgcgaaaacgtgaaaa 287  Q
    |||||||||  |||||||    
T  38784360 cgcgcgaaatggtgaaaa 38784377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 283
Target Start/End: Complemental strand, 3894591 - 3894492
Alignment:
Q  184 atttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtg 283  Q
    ||||||||||| |||| ||||| ||||| ||||| |  |  ||||| ||||||  |||||||||||| |||||||||||  ||||| |||||||||||||    
T  3894591 atttttctgtacattaagatagggctaaatgtcatggacacgtaggtgaaaacggcatcgaaaacggattaacggtttgatttttatgcgcgaaaacgtg 3894492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 18364618 - 18364662
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtg 214  Q
    |||||||||||||||||| |||||||| ||||||| |||||||||    
T  18364618 tggttgaaacttgaatttctctgtagaatatgataaagctaagtg 18364662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 140
Target Start/End: Complemental strand, 25124107 - 25124043
Alignment:
Q  77 tttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccatttt-gaaaatgagtgttt 140  Q
    ||||| |||||||||||||||||| ||||| ||| ||| | ||||||||| ||||||||||||||    
T  25124107 tttggaagaaaacgagagtttcgtttgaaaattcaattgttaaccattttggaaaatgagtgttt 25124043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 145; Significance: 3e-76; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 123 - 323
Target Start/End: Complemental strand, 12536440 - 12536240
Alignment:
Q  123 ttttgaaaatgagtgtttatgcaaggttctggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagc 222  Q
    ||||| |||| |||| |||||  |||||||||||| | || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12536440 ttttgcaaataagtgattatgtgaggttctggaaaccaatttttggatggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagc 12536341  T
Q  223 gtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtcaggcagaaatc 322  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||| ||||||||||||||||||||||    
T  12536340 gtgtaggcgaaaacgacatcgaaaacgggttaacggtttggattttacgcgagaaaacgtgaaaatttgaaaatctgatgttgtctgtcaggcagaaatc 12536241  T
Q  323 g 323  Q
    |    
T  12536240 g 12536240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 123 - 328
Target Start/End: Complemental strand, 15517442 - 15517237
Alignment:
Q  123 ttttgaaaatgagtgtttatgcaaggttctggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagc 222  Q
    ||||| |||| |||| |||||  ||||| || |||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  15517442 ttttgcaaataagtgattatgtgaggttttgaaaattgatttttgggtagttgaaacttgaatttttctgtagattatgatagagctaagagttaggagc 15517343  T
Q  223 gtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtcaggcagaaatc 322  Q
    ||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  15517342 gtgtaggcgaaaacggcatcaaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaatctgatgttgtctgtcaggcagaaatc 15517243  T
Q  323 gtacta 328  Q
    | ||||    
T  15517242 ggacta 15517237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 123 - 323
Target Start/End: Original strand, 34851562 - 34851761
Alignment:
Q  123 ttttgaaaatgagtgtttatgcaaggttctggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagc 222  Q
    ||||| |||| |||| |||||  ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  34851562 ttttgcaaataagtgattatgtgaggttttggaaatcgatatttgggtggttgaaacttaaatttttctgtagattatgatagagctaagtgtcaggagc 34851661  T
Q  223 gtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtcaggcagaaatc 322  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||| ||| |||||||||||  |||||||||    
T  34851662 gtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgtgaaaacgtg-aaattagaaaatctgatgttgtctgtcgagcagaaatc 34851760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 146 - 323
Target Start/End: Original strand, 17547753 - 17547930
Alignment:
Q  146 aggttctggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaa 245  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||| ||||||||    
T  17547753 aggttttggaaatcgatttttgggtggttgaaacttgaatttttctgtagataatgataaggctaagtgtcaggagcgtgtaggcgaaaacgacatcgaa 17547852  T
Q  246 aacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtcaggcagaaatcg 323  Q
    || ||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||  ||||||||||    
T  17547853 aatgggttaacggtttggattttacgcgcgaaaacgtgaaaattagaaaatctgatgttgtctgtcgagcagaaatcg 17547930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 140 - 311
Target Start/End: Original strand, 11849872 - 11850043
Alignment:
Q  140 tatgcaaggttctggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaac 239  Q
    ||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||       
T  11849872 tatgcgaggttctggaaatcgagttttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcagaagcgcgtaggcgaaaacggt 11849971  T
Q  240 atcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtc 311  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||| |||||||||||    
T  11849972 atcgaaaacgggttaacggtttggatcttacgcgcgaaaacgtgaaaattagaaaatctgatgttgtctgtc 11850043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 164 - 321
Target Start/End: Original strand, 23395317 - 23395474
Alignment:
Q  164 tttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttgg 263  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||    
T  23395317 tttgggtggttgaaacttgaatctttttgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacggcatcgaaaacgggttaacagtttgg 23395416  T
Q  264 attttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtcaggcagaaat 321  Q
    |||||||||||||||||||||||||| ||||| ||| |||||||||||  ||||||||    
T  23395417 attttacgcgcgaaaacgtgaaaattagaaaatctgatgttgtctgtcgagcagaaat 23395474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 146 - 323
Target Start/End: Complemental strand, 20188493 - 20188314
Alignment:
Q  146 aggttctggaaatcgatatttgggtggttgaaa-cttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcga 244  Q
    ||||||||||||||||  || |||||||||||| |||||||||||||||||||||||||||||||||||||||||| || ||||||||||||  ||||||    
T  20188493 aggttctggaaatcgagtttggggtggttgaaaacttgaatttttctgtagattatgatagagctaagtgtcaggaacgcgtaggcgaaaacggcatcga 20188394  T
Q  245 aaacgggttaacggtttggattttacgcgcgaaaacgtgaaaatt-ggaaaaactgttgttgtctgtcaggcagaaatcg 323  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||  ||||||||||    
T  20188393 aaacgggttaatggtttggattttacgcgcgaaaacgtgaaaattaggaaaatctgatgttgtctgtcgagcagaaatcg 20188314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 146 - 285
Target Start/End: Original strand, 29172136 - 29172275
Alignment:
Q  146 aggttctggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaa 245  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||    
T  29172136 aggttttggaaatcgatttttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtttaggcgaaaacggcatcgaa 29172235  T
Q  246 aacgggttaacggtttggattttacgcgcgaaaacgtgaa 285  Q
    |||||||||||||||||  ||||| | |||||||||||||    
T  29172236 aacgggttaacggtttgatttttatgtgcgaaaacgtgaa 29172275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 172 - 323
Target Start/End: Complemental strand, 38167478 - 38167327
Alignment:
Q  172 gttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacg 271  Q
    ||||||||||||||||||||||| |||| ||||| ||||||||||||||| ||||||| ||||||  ||||||||||||||||||||||||| |||||||    
T  38167478 gttgaaacttgaatttttctgtacattaagatagggctaagtgtcaggagtgtgtaggtgaaaacggcatcgaaaacgggttaacggtttggtttttacg 38167379  T
Q  272 cgcgaaaacgtgaaaattggaaaaactgttgttgtctgtcaggcagaaatcg 323  Q
    |||||||||||||||||||||||| ||| |||||||||||| | ||||||||    
T  38167378 cgcgaaaacgtgaaaattggaaaatctgatgttgtctgtcaagtagaaatcg 38167327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 129 - 285
Target Start/End: Original strand, 37641765 - 37641921
Alignment:
Q  129 aaatgagtgtttatgcaaggttctggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtag 228  Q
    |||| |||| |||||  ||||| |||||| |||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  37641765 aaataagtgattatgtgaggttttggaaaccgatttttgggtggtttaaacttgaatttttctatagattatgatagagctaagtgtcaggagcgtgtag 37641864  T
Q  229 gcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 285  Q
    ||||||||  ||||||||||||||||||||||||| ||||| | |||||||||||||    
T  37641865 gcgaaaacggcatcgaaaacgggttaacggtttggtttttatgagcgaaaacgtgaa 37641921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 129 - 285
Target Start/End: Complemental strand, 36167312 - 36167156
Alignment:
Q  129 aaatgagtgtttatgcaaggttctggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtag 228  Q
    ||||||||| |||||  ||||| |||||| |||| ||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||||| ||||    
T  36167312 aaatgagtgattatgtgaggttttggaaaccgatttttgggtggttgaaactggaatctttctgtagattgtgatagagctaagtgtcaggagcgcgtag 36167213  T
Q  229 gcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 285  Q
    ||||||||  ||||||||||||||||||||||||  ||||| |||||||||||||||    
T  36167212 gcgaaaacggcatcgaaaacgggttaacggtttgatttttaggcgcgaaaacgtgaa 36167156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 71 - 285
Target Start/End: Complemental strand, 8604678 - 8604463
Alignment:
Q  71 gagtcgtttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccattttg-aaaatgagtgtttatgcaaggttctggaaatcgatatttggg 169  Q
    ||||| |||||||||||||| ||||||||||||||| ||| ||| | |||| ||||| ||||||||||||| || |||||| ||||||  ||  || |||    
T  8604678 gagtcatttgggagaaaacgggagtttcgtgtgaaaattcaattgttaaccgttttggaaaatgagtgtttgtgtaaggttttggaaaatgaatttgggg 8604579  T
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    | ||||||||||||||||||||||| |||||||||| |||||||||||||| | |||||| ||||||  |||||||||| | |||||||||||  |||||    
T  8604578 ttgttgaaacttgaatttttctgtacattatgatagggctaagtgtcaggaacatgtaggtgaaaacggcatcgaaaacagattaacggtttgattttta 8604479  T
Q  270 cgcgcgaaaacgtgaa 285  Q
     |||||||||||||||    
T  8604478 tgcgcgaaaacgtgaa 8604463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 123 - 285
Target Start/End: Original strand, 22147021 - 22147183
Alignment:
Q  123 ttttgaaaatgagtgtttatgcaaggttctggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagc 222  Q
    ||||| |||| |||| |||||  ||||| |||||| |||| ||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||    
T  22147021 ttttgcaaataagtgattatgtgaggttttggaaaccgatttttgggtggtttaaacttgaatttttctatagattatgatagggctaagtgtcaggagc 22147120  T
Q  223 gtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 285  Q
    || |||||||||||  ||||||||||||||||||||||||| ||||| | |||||||||||||    
T  22147121 gtttaggcgaaaacggcatcgaaaacgggttaacggtttggtttttatgagcgaaaacgtgaa 22147183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 164 - 285
Target Start/End: Complemental strand, 13511812 - 13511691
Alignment:
Q  164 tttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttgg 263  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||  |||||||||||||||||||||||||    
T  13511812 tttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtttcaggagcgtgtaggagaaaacggcatcgaaaacgggttaacggtttgg 13511713  T
Q  264 attttacgcgcgaaaacgtgaa 285  Q
     ||||| ||| |||||||||||    
T  13511712 tttttatgcgggaaaacgtgaa 13511691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 172 - 328
Target Start/End: Complemental strand, 23491941 - 23491785
Alignment:
Q  172 gttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacg 271  Q
    ||||||||||||||||||||||| |||| ||||| ||||||||||| || |  ||||| ||||||  || ||||||||| |||||||||||| |||||||    
T  23491941 gttgaaacttgaatttttctgtacattaagatagggctaagtgtcatgaacaagtaggtgaaaacggcaccgaaaacggattaacggtttggtttttacg 23491842  T
Q  272 cgcgaaaacgtgaaaattggaaaaactgttgttgtctgtcaggcagaaatcgtacta 328  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||    
T  23491841 cgcgaaaacgtgaaaattggaaaatctgatgttgtctgtcaggcagaaatcggacta 23491785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 129 - 285
Target Start/End: Complemental strand, 21619163 - 21619007
Alignment:
Q  129 aaatgagtgtttatgcaaggttctggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtag 228  Q
    ||||||| | |||||  ||||| |||||| |||| |||||||||||||||||  |||||||||||||||| |||||||| ||||||||||||||| ||||    
T  21619163 aaatgagggattatgtgaggttttggaaaccgatttttgggtggttgaaactgtaatttttctgtagattgtgatagagttaagtgtcaggagcgcgtag 21619064  T
Q  229 gcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 285  Q
    ||||||||  ||||||||||||||||||||||||  ||||| |||||||||||||||    
T  21619063 gcgaaaacggcatcgaaaacgggttaacggtttgatttttaggcgcgaaaacgtgaa 21619007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 153 - 262
Target Start/End: Original strand, 24340236 - 24340345
Alignment:
Q  153 ggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggt 252  Q
    |||||||||| |||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||    
T  24340236 ggaaatcgatttttgggtggttgaaacttgaatctttttgtagattatgatagggctaagtgtcaggagcgtgtaggcgaaaacggcatcgaaaacgggt 24340335  T
Q  253 taacggtttg 262  Q
    ||||||||||    
T  24340336 taacggtttg 24340345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 164 - 285
Target Start/End: Complemental strand, 12159028 - 12158908
Alignment:
Q  164 tttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttgg 263  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||   ||||||||||||||||||||||||     
T  12159028 tttgggtggttgaaacttgaatttttctgtaaattatgatagagttaagtgtca-gagcgtgtaggcgaaaatggcatcgaaaacgggttaacggtttga 12158930  T
Q  264 attttacgcgcgaaaacgtgaa 285  Q
     ||||| |||||||||||||||    
T  12158929 tttttatgcgcgaaaacgtgaa 12158908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 146 - 285
Target Start/End: Original strand, 52338237 - 52338376
Alignment:
Q  146 aggttctggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaa 245  Q
    ||||| |||| |||||| |||||| |||| ||||||||||||| |||||||||||||||||||||||||||||||| || ||||| |||||  |||||||    
T  52338237 aggttttggagatcgatttttgggcggttaaaacttgaattttcctgtagattatgatagagctaagtgtcaggagagtttaggcaaaaacggcatcgaa 52338336  T
Q  246 aacgggttaacggtttggattttacgcgcgaaaacgtgaa 285  Q
    |||||||||||||||||  ||||| | |||||||||||||    
T  52338337 aacgggttaacggtttgatttttatgtgcgaaaacgtgaa 52338376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 123 - 285
Target Start/End: Complemental strand, 10551091 - 10550929
Alignment:
Q  123 ttttgaaaatgagtgtttatgcaaggttctggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagc 222  Q
    ||||| ||||||||| |||||  ||||| |||||| |||| ||||||||||||||||| || ||||| |||| ||| |||||||||||||||| ||||||    
T  10551091 ttttgcaaatgagtgattatgtgaggttttggaaaccgatttttgggtggttgaaactggattttttttgtatattgtgatagagctaagtgttaggagc 10550992  T
Q  223 gtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 285  Q
    | ||||||||||||  |||||||||||| ||||||||||   ||||| |||||||||||||||    
T  10550991 gcgtaggcgaaaacggcatcgaaaacggattaacggttttatttttaggcgcgaaaacgtgaa 10550929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 155 - 285
Target Start/End: Original strand, 13968093 - 13968222
Alignment:
Q  155 aaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggtta 254  Q
    |||||||| ||||| | |||||||||| | |||||| ||||||||||||||||||| || ||| ||||||||||||||||||  ||||||||||||||||    
T  13968093 aaatcgatttttgg-tagttgaaactttagtttttcggtagattatgatagagctatgtctcatgagcgtgtaggcgaaaacggcatcgaaaacgggtta 13968191  T
Q  255 acggtttggattttacgcgcgaaaacgtgaa 285  Q
    |||||| || |||||||||||||||||||||    
T  13968192 acggttgggtttttacgcgcgaaaacgtgaa 13968222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 155 - 285
Target Start/End: Original strand, 13973568 - 13973697
Alignment:
Q  155 aaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggtta 254  Q
    |||||||| ||||| | |||||||||| | |||||| ||||||||||||||||||| || ||| ||||||||||||||||||  ||||||||||||||||    
T  13973568 aaatcgatttttgg-tagttgaaactttagtttttcggtagattatgatagagctatgtctcatgagcgtgtaggcgaaaacggcatcgaaaacgggtta 13973666  T
Q  255 acggtttggattttacgcgcgaaaacgtgaa 285  Q
    |||||| || |||||||||||||||||||||    
T  13973667 acggttgggtttttacgcgcgaaaacgtgaa 13973697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 139 - 236
Target Start/End: Original strand, 13667362 - 13667459
Alignment:
Q  139 ttatgcaaggttctggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaac 236  Q
    |||||| |||||  |||||||||| ||| |||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  13667362 ttatgcgaggtttgggaaatcgatttttaggtggttgaaacttgagtctttctgtagattatgatagagttaagtgtcaggagcgtgtaggcgaaaac 13667459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 77 - 312
Target Start/End: Complemental strand, 53770702 - 53770468
Alignment:
Q  77 tttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccattttg-aaaatgagtgtttatgcaaggttctggaaatcgatatttg-ggtggtt 174  Q
    ||||| |||||||| ||||||||| ||||| ||| ||| | |||| ||||| ||||||||||||| ||  ||||| || |||  || ||||| ||| |||    
T  53770702 tttggaagaaaacgggagtttcgtttgaaaattcaattgttaaccgttttggaaaatgagtgtttgtgtgaggtt-tgtaaaatga-atttgaggttgtt 53770605  T
Q  175 gaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgc 274  Q
    |||||| | ||||||||||  |||||||||| ||||||||| |||||| |||||||||||||  |||||||||||| |||||||||||  ||||| ||||    
T  53770604 gaaactgggatttttctgtgcattatgatagtgctaagtgttaggagcatgtaggcgaaaacggcatcgaaaacggattaacggtttgatttttatgcgc 53770505  T
Q  275 gaaaacgtgaaaattggaaaaactgttgttgtctgtca 312  Q
    |||||||| | || | ||||| ||| ||||||||||||    
T  53770504 gaaaacgt-agaagttgaaaatctgatgttgtctgtca 53770468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 170 - 287
Target Start/End: Original strand, 50351132 - 50351248
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    ||||||| ||||||| ||| |||||||||||||||||| |||||||||||| ||||||||||||||| ||||| ||| | | ||||||||||| ||||||    
T  50351132 tggttgagacttgaaattt-ctgtagattatgatagagttaagtgtcaggaccgtgtaggcgaaaacgacatcaaaatccgattaacggtttgaatttta 50351230  T
Q  270 cgcgcgaaaacgtgaaaa 287  Q
    |||||||||  |||||||    
T  50351231 cgcgcgaaatggtgaaaa 50351248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 153 - 285
Target Start/End: Complemental strand, 14818842 - 14818710
Alignment:
Q  153 ggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggt 252  Q
    |||||| ||| || ||||||||||||||||||| ||| |||| |||||||||| |||||||||||||| | |||||| |||||   |||||||||| | |    
T  14818842 ggaaatagattttggggtggttgaaacttgaatctttatgtatattatgatagggctaagtgtcaggaacatgtaggtgaaaatggcatcgaaaacagat 14818743  T
Q  253 taacggtttggattttacgcgcgaaaacgtgaa 285  Q
    ||||||||||  ||||| |||||||||||||||    
T  14818742 taacggtttgatttttatgcgcgaaaacgtgaa 14818710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 164 - 284
Target Start/End: Original strand, 45530910 - 45531030
Alignment:
Q  164 tttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttgg 263  Q
    |||||||||||| ||||||||||||||||||||||||||||| || ||||||||||| | |||||| ||||||   ||||||||| | |||||||||||     
T  45530910 tttgggtggttggaacttgaatttttctgtagattatgatagggccaagtgtcaggaacatgtaggtgaaaacggtatcgaaaacagattaacggtttga 45531009  T
Q  264 attttacgcgcgaaaacgtga 284  Q
     ||||| | ||||||||||||    
T  45531010 tttttatgagcgaaaacgtga 45531030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 71 - 285
Target Start/End: Original strand, 13326952 - 13327166
Alignment:
Q  71 gagtcgtttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccatttt-gaaaatgagtgtttatgcaaggttctggaaatcgatatttggg 169  Q
    |||||||||||||||||| | ||||||||||||||| ||| ||| | ||||||||| |||||||||||||| ||  ||||| || |||  ||  || |||    
T  13326952 gagtcgtttgggagaaaatgggagtttcgtgtgaaaattcaattgttaaccattttggaaaatgagtgtttgtgtgaggtt-tgtaaaatgaatttgggg 13327050  T
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    | ||| |||||||||||||| | |  ||||||||||  ||||||||||||| |  ||||| ||||||  |||||||||| | |||||||||||  |||||    
T  13327051 ttgttaaaacttgaatttttttatgcattatgataggtctaagtgtcaggaacaagtaggtgaaaacggcatcgaaaacagtttaacggtttgattttta 13327150  T
Q  270 cgcgcgaaaacgtgaa 285  Q
     | |||||||||||||    
T  13327151 tgtgcgaaaacgtgaa 13327166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 170 - 288
Target Start/End: Original strand, 9511229 - 9511346
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    ||||||| ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||   ||| ||| | | ||||||||||  ||||||    
T  9511229 tggttgagacttgaaattt-ctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacggaatcaaaatccgattaacggtttcaatttta 9511327  T
Q  270 cgcgcgaaaacgtgaaaat 288  Q
    |||||||||  ||||||||    
T  9511328 cgcgcgaaatggtgaaaat 9511346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 170 - 288
Target Start/End: Original strand, 9519204 - 9519321
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    ||||||| ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||   ||| ||| | | ||||||||||  ||||||    
T  9519204 tggttgagacttgaaattt-ctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacggaatcaaaatccgattaacggtttcaatttta 9519302  T
Q  270 cgcgcgaaaacgtgaaaat 288  Q
    |||||||||  ||||||||    
T  9519303 cgcgcgaaatggtgaaaat 9519321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 167 - 285
Target Start/End: Complemental strand, 17100224 - 17100106
Alignment:
Q  167 gggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatt 266  Q
    |||| ||||||||||||||||||||||| |||| ||||||||||||||||| || |  ||||| ||||||  |||||||||||| ||||||| |||  ||    
T  17100224 gggttgttgaaacttgaatttttctgtacattaagatagagctaagtgtcatgaacacgtaggtgaaaacggcatcgaaaacggattaacggattgattt 17100125  T
Q  267 ttacgcgcgaaaacgtgaa 285  Q
    ||| |||||||||||||||    
T  17100124 ttatgcgcgaaaacgtgaa 17100106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 71 - 285
Target Start/End: Original strand, 11061587 - 11061802
Alignment:
Q  71 gagtcgtttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccattttg--aaaatgagtgtttatgcaaggttctggaaatcgatatttgg 168  Q
    ||||||||||||||||| || |||||||| |||||| ||| ||| | ||||  ||||  ||||||| | ||| || |||| | ||||||  ||  || ||    
T  11061587 gagtcgtttgggagaaatcgggagtttcgggtgaaaattcaattgttaaccgctttggaaaaatgattttttgtgtaaggctttggaaaatgaatttggg 11061686  T
Q  169 gtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttt 268  Q
    || |||||| |||||||||||||||| |||| ||||||||||||||||| || | |||||| ||||||    |||||||||| |||||||||||  ||||    
T  11061687 gttgttgaa-cttgaatttttctgtacattaagatagagctaagtgtcatgaacatgtaggtgaaaacggtgtcgaaaacggattaacggtttgattttt 11061785  T
Q  269 acgcgcgaaaacgtgaa 285  Q
    | |||||||||||||||    
T  11061786 atgcgcgaaaacgtgaa 11061802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 170 - 287
Target Start/End: Complemental strand, 16820865 - 16820749
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    |||||||||| |||| |||| ||||||||||| |||||  |||||||| |||||||||||||||||| ||||| ||| | | ||||||||||||||||||    
T  16820865 tggttgaaacatgaaatttt-tgtagattatgttagagtcaagtgtcaagagcgtgtaggcgaaaacgacatcaaaatccgattaacggtttggatttta 16820767  T
Q  270 cgcgcgaaaacgtgaaaa 287  Q
    |||||||||  |||||||    
T  16820766 cgcgcgaaatggtgaaaa 16820749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 170 - 282
Target Start/End: Complemental strand, 18910721 - 18910610
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    |||||||||| |||| |||| ||||||||||||||| || |||||| |||||| |||||||||||||  |||||||||||| |||||||||||  |||||    
T  18910721 tggttgaaacatgaaatttt-tgtagattatgatagtgccaagtgttaggagcatgtaggcgaaaacggcatcgaaaacggattaacggtttgattttta 18910623  T
Q  270 cgcgcgaaaacgt 282  Q
     ||||||||||||    
T  18910622 tgcgcgaaaacgt 18910610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 190 - 290
Target Start/End: Complemental strand, 37038769 - 37038669
Alignment:
Q  190 ctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaatt 289  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||  |||| ||| | | ||||||||||| |||||||||||||||  |||||||||    
T  37038769 ctgtagattatgatagagccaagtttcaggagcgtgtaggcgaaaacggcatcaaaatccgattaacggtttgaattttacgcgcgaaatggtgaaaatt 37038670  T
Q  290 g 290  Q
    |    
T  37038669 g 37038669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 153 - 249
Target Start/End: Original strand, 52212722 - 52212818
Alignment:
Q  153 ggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacg 249  Q
    |||||||||| || ||||||||||||||||||| ||||||||||||||||||| |||||||||||||| | |||||  ||||||  |||||||||||    
T  52212722 ggaaatcgattttggggtggttgaaacttgaatctttctgtagattatgatagggctaagtgtcaggaacatgtagatgaaaacggcatcgaaaacg 52212818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 190 - 288
Target Start/End: Original strand, 3394083 - 3394181
Alignment:
Q  190 ctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 288  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||| ||||| ||| | | |||| |||||| |||||||||||||||  ||||||||    
T  3394083 ctgtagattatgatagagccaagtgtcaggagagtgtaggcgaaaacgacatcaaaatccgattaagggtttgaattttacgcgcgaaatggtgaaaat 3394181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 71 - 312
Target Start/End: Complemental strand, 54423682 - 54423440
Alignment:
Q  71 gagtcgtttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccattttg---aaaatgagtgtttatgcaaggttctggaaatcgatatttg 167  Q
    ||||||||||||||||| |||| |||||| |||||| ||| ||| | |||| |||||   ||||||||||||  || |||| | ||||||  ||  || |    
T  54423682 gagtcgtttgggagaaatcgagggtttcgggtgaaaattcaattgttaaccgttttggaaaaaatgagtgttg-tgtaaggctttggaaaatgaatttag 54423584  T
Q  168 ggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattt 267  Q
    ||| ||||||||||||||||||||||| |||  ||||| ||||||||||| || |  ||||| |||||| ||||||||||||| |||||  || |  |||    
T  54423583 ggttgttgaaacttgaatttttctgtacattcagatagggctaagtgtcatgaacacgtaggtgaaaacgacatcgaaaacggattaacaattcgatttt 54423484  T
Q  268 tacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtca 312  Q
    || ||||||||| |||||  || ||||| ||| ||||||||||||    
T  54423483 tatgcgcgaaaatgtgaaggtt-gaaaatctggtgttgtctgtca 54423440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 187 - 287
Target Start/End: Original strand, 17956530 - 17956630
Alignment:
Q  187 tttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaa 286  Q
    ||||||||||||||| |||||  ||||||||||||||||||||||||||| ||||| ||| | | ||||||||||| ||||||||| |||||  ||||||    
T  17956530 tttctgtagattatgttagaggcaagtgtcaggagcgtgtaggcgaaaacgacatcaaaatccgattaacggtttgaattttacgcacgaaatggtgaaa 17956629  T
Q  287 a 287  Q
    |    
T  17956630 a 17956630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 187 - 287
Target Start/End: Complemental strand, 28557757 - 28557657
Alignment:
Q  187 tttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaa 286  Q
    ||||||||||||||| |||||  |||||||||||||||||||||||||||  |||| ||| | | ||||||||||| |||||||||||||||  ||||||    
T  28557757 tttctgtagattatgttagagtcaagtgtcaggagcgtgtaggcgaaaacggcatcaaaatccgattaacggtttgaattttacgcgcgaaatggtgaaa 28557658  T
Q  287 a 287  Q
    |    
T  28557657 a 28557657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 68 - 278
Target Start/End: Original strand, 54038706 - 54038917
Alignment:
Q  68 gttgagtcgtttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccatttt-gaaaatgagtgtttatgcaaggttctggaaatcgatattt 166  Q
    ||||||||||||||||||||||| |  ||||||||||||  |||||  | || | |||| |  ||| |||| ||||   ||||| ||||||  ||| |||    
T  54038706 gttgagtcgtttgggagaaaacgggtttttcgtgtgaaatgtcgatgtttaagcgttttcgccaataagtgattatatgaggttttggaaaatgattttt 54038805  T
Q  167 ggg-tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggat 265  Q
    ||| |||||||||| || | |||| ||||||||||| |||||  |||||||||||||||||||||||||||  |||| ||| | | ||||||||||| ||    
T  54038806 gggatggttgaaacatggaatttt-tgtagattatgttagagtcaagtgtcaggagcgtgtaggcgaaaacggcatcaaaatccgattaacggtttgaat 54038904  T
Q  266 tttacgcgcgaaa 278  Q
    |||||||||||||    
T  54038905 tttacgcgcgaaa 54038917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 190 - 288
Target Start/End: Original strand, 13025897 - 13025995
Alignment:
Q  190 ctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 288  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||  |||| ||| | | ||||||||| | |||||||||||||||  ||||||||    
T  13025897 ctgtagattatgatagagccaagtgtcaggagagtgtaggcgaaaacggcatcaaaatccgattaacggttggaattttacgcgcgaaatggtgaaaat 13025995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 190 - 288
Target Start/End: Original strand, 13029489 - 13029587
Alignment:
Q  190 ctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 288  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||  |||| ||| | | ||||||||| | |||||||||||||||  ||||||||    
T  13029489 ctgtagattatgatagagccaagtgtcaggagagtgtaggcgaaaacggcatcaaaatccgattaacggttggaattttacgcgcgaaatggtgaaaat 13029587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 190 - 288
Target Start/End: Original strand, 42324303 - 42324400
Alignment:
Q  190 ctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 288  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||  |||| ||| | | ||||||||||| |||||||||||||||  ||||||||    
T  42324303 ctgtagattatgatagagccaagtgtcaggagagtgtaggcgaaaac-gcatcaaaatccgattaacggtttgaattttacgcgcgaaatggtgaaaat 42324400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 77 - 312
Target Start/End: Complemental strand, 16261123 - 16260889
Alignment:
Q  77 tttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccattttg-aaaatgagtgtttatgcaaggttctggaaatcgatatttg-ggtggtt 174  Q
    |||||||||||||| ||||||||| ||||| |||  || | |||| ||||| ||||||||||||| ||  ||||| || |||  || ||||| ||| |||    
T  16261123 tttgggagaaaacgggagtttcgtttgaaaattcatttgttaaccgttttggaaaatgagtgtttgtgtgaggtt-tgtaaaatga-atttgaggttgtt 16261026  T
Q  175 gaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgc 274  Q
    |||||| | ||||||||||  |||||||||| ||||| ||| |||||| |||||| |||||   |||||||||||| |||||| ||||  ||||| ||||    
T  16261025 gaaactgggatttttctgtgcattatgatagtgctaattgttaggagcatgtaggtgaaaatggcatcgaaaacggattaacgatttgatttttatgcgc 16260926  T
Q  275 gaaaacgtgaaaattggaaaaactgttgttgtctgtca 312  Q
    |||||||| | || | ||||| ||| ||||||||||||    
T  16260925 gaaaacgt-agaagttgaaaatctgatgttgtctgtca 16260889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 191 - 288
Target Start/End: Original strand, 18366841 - 18366938
Alignment:
Q  191 tgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 288  Q
    |||||||||||||||||| ||||||||| || ||||||||||||||  |||| ||| | | ||||||||||| |||||||||||||||  ||||||||    
T  18366841 tgtagattatgatagagccaagtgtcagaagagtgtaggcgaaaacggcatcaaaatccgattaacggtttgaattttacgcgcgaaatggtgaaaat 18366938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 170 - 287
Target Start/End: Complemental strand, 30206965 - 30206849
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    |||||||||| |||| ||| ||||| |||||| |||||  ||||||||||||||||||||||||||||  ||| ||| | | ||||||||||| ||||||    
T  30206965 tggttgaaacatgaaattt-ctgtaaattatgttagagtcaagtgtcaggagcgtgtaggcgaaaacagtatcaaaatccgattaacggtttgaatttta 30206867  T
Q  270 cgcgcgaaaacgtgaaaa 287  Q
    |||||||||  |||||||    
T  30206866 cgcgcgaaatggtgaaaa 30206849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 170 - 287
Target Start/End: Original strand, 40039425 - 40039541
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    ||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||| |  |||| |||   | ||||||||||| ||||||    
T  40039425 tggtttaaacttgaaattt-ctgtagattatgatagagctaagtgtcaggagcgtgtgggcgaaagcggcatcaaaatttgattaacggtttgaatttta 40039523  T
Q  270 cgcgcgaaaacgtgaaaa 287  Q
     ||||||||  |||||||    
T  40039524 tgcgcgaaatagtgaaaa 40039541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 170 - 242
Target Start/End: Original strand, 17758759 - 17758830
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatc 242  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||| ||||| ||||||||||||||| ||||    
T  17758759 tggttgaaacttgaaattt-ctgtagattatgatagagctaagtgttaggagtgtgtaggcgaaaacagcatc 17758830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 170 - 242
Target Start/End: Original strand, 19060079 - 19060150
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatc 242  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||| ||||| ||||||||||||||| ||||    
T  19060079 tggttgaaacttgaaattt-ctgtagattatgatagagctaagtgttaggagtgtgtaggcgaaaacagcatc 19060150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 77 - 312
Target Start/End: Original strand, 51961555 - 51961788
Alignment:
Q  77 tttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccattttg-aaaatgagtgtttatgcaaggttctggaaatcgatatttgggtggttg 175  Q
    |||||||||||||||||||||||| ||||| ||| ||| | |||| ||||| ||||||||||||| ||  ||||| || |||  || ||| |||| ||||    
T  51961555 tttgggagaaaacgagagtttcgtttgaaaattcaattgttaaccgttttggaaaatgagtgtttgtgtgaggtt-tgtaaaatga-attggggttgttg 51961652  T
Q  176 aaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcg 275  Q
    ||| | | ||||||||||  |||||||||| | |||| || |||||| |||  | ||||||  | |||||||||| |||||||||||  ||||| |||||    
T  51961653 aaattgggatttttctgtgcattatgatagtgttaagagttaggagcatgtgagtgaaaacggcgtcgaaaacggattaacggtttgatttttatgcgcg 51961752  T
Q  276 aaaacgtgaaaattggaaaaactgttgttgtctgtca 312  Q
    ||||||| | || | ||||| ||| ||||||||||||    
T  51961753 aaaacgt-agaagttgaaaatctgatgttgtctgtca 51961788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 71 - 285
Target Start/End: Original strand, 11882630 - 11882844
Alignment:
Q  71 gagtcgtttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccattttg-aaaatgagtgtttatgcaaggttctggaaatcgatatttggg 169  Q
    ||||||||||||||||| || ||||||||||| ||| ||| ||| | |||| ||||| |||||||||||||  |  |||||    ||||  || |  |||    
T  11882630 gagtcgtttgggagaaatcgggagtttcgtgttaaaattcaattgt-aaccgttttggaaaatgagtgtttgagtgaggtttataaaatgaatttggggg 11882728  T
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    | ||| ||||||||||||||||||  |||||||||| | |||||||||||| |  ||||| ||||||  ||| |||||| | |||||||||||  |||||    
T  11882729 ttgttaaaacttgaatttttctgtgcattatgataggggtaagtgtcaggaacaagtaggtgaaaacggcattgaaaacagattaacggtttgattttta 11882828  T
Q  270 cgcgcgaaaacgtgaa 285  Q
     |||||||||||||||    
T  11882829 tgcgcgaaaacgtgaa 11882844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 123 - 278
Target Start/End: Complemental strand, 19430705 - 19430553
Alignment:
Q  123 ttttgaaaatgagtgtttatgcaaggttctggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagc 222  Q
    |||||||||| |||| ||||| |||||| ||||||   || || || | | || ||||| ||||||||||   |||| |||||| ||||||| |||||||    
T  19430705 ttttgaaaataagtgattatgtaaggttttggaaaattattttgggatagatggaactttaatttttctg---attaggatagaactaagtggcaggagc 19430609  T
Q  223 gtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaa 278  Q
    ||||| ||||||||  ||||||||||   ||||||||||| |||||||||||||||    
T  19430608 gtgtacgcgaaaacggcatcgaaaacaaattaacggtttgaattttacgcgcgaaa 19430553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 288
Target Start/End: Original strand, 178810 - 178908
Alignment:
Q  190 ctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 288  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||  |||| ||| | | |||||||||   |||||| ||||||||  ||||||||    
T  178810 ctgtagattatgatagagccaagtgtcaggagagtgtaggcgaaaacggcatcaaaatccgattaacggttgaaattttatgcgcgaaatggtgaaaat 178908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 288
Target Start/End: Complemental strand, 17513550 - 17513452
Alignment:
Q  190 ctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 288  Q
    ||||| |||| |||||||| |||||||||||||||||||||||||||  || | ||| | | ||||||||| | |||||||||||||||  ||||||||    
T  17513550 ctgtaaattaagatagagccaagtgtcaggagcgtgtaggcgaaaacggcaccaaaatccgattaacggttggaattttacgcgcgaaatggtgaaaat 17513452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 68 - 287
Target Start/End: Original strand, 1468167 - 1468387
Alignment:
Q  68 gttgagtcgtttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccatttt-gaaaatgagtgtttatgcaaggttctggaaatcgatattt 166  Q
    ||||||||||||||||||||||| |  ||||||||||||  |||||  | || | |||| |  ||| |||| |||||  ||||| ||||||  ||  |||    
T  1468167 gttgagtcgtttgggagaaaacgggtttttcgtgtgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaatgactttt 1468266  T
Q  167 ggg-tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggat 265  Q
    ||| |||||||||| |||| |||| | ||||||||| |||||  ||||||||||| | |||||| ||||||  |||| ||| | | ||||||||||| ||    
T  1468267 gggatggttgaaacatgaaatttt-tatagattatgttagagtcaagtgtcaggatcatgtaggtgaaaacggcatcaaaatccgattaacggtttgcat 1468365  T
Q  266 tttacgcgcgaaaacgtgaaaa 287  Q
    |||||||||||||  |||||||    
T  1468366 tttacgcgcgaaatggtgaaaa 1468387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 170 - 287
Target Start/End: Original strand, 16934513 - 16934629
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    |||||||||| |||| |||| ||||||||||| |||||  |||||||||||||||||||||||||||  | || ||| | | ||||||||||| ||||||    
T  16934513 tggttgaaacatgaaatttt-tgtagattatgttagagtcaagtgtcaggagcgtgtaggcgaaaacggcgtcaaaatccgattaacggtttgaatttta 16934611  T
Q  270 cgcgcgaaaacgtgaaaa 287  Q
      |||||||  |||||||    
T  16934612 ttcgcgaaatggtgaaaa 16934629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 288
Target Start/End: Complemental strand, 12276517 - 12276422
Alignment:
Q  193 tagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 288  Q
    |||||||||||||||| |||||| ||||| |||||||| ||||| ||||| ||| | | ||||||||||| || ||| ||||||||  ||||||||    
T  12276517 tagattatgatagagccaagtgttaggagagtgtaggcaaaaacgacatcaaaatccgattaacggtttgaatgttatgcgcgaaatggtgaaaat 12276422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 286
Target Start/End: Complemental strand, 2843758 - 2843646
Alignment:
Q  173 ttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgc 272  Q
    |||||||||||||||| ||||| |||| ||||| | ||||||||| || |  ||||| ||||||  |||||||||||| |||| ||||||  ||||| ||    
T  2843758 ttgaaacttgaatttt-ctgtacattaagatagggttaagtgtcatgaacacgtaggtgaaaacggcatcgaaaacggattaatggtttgatttttatgc 2843660  T
Q  273 gcgaaaacgtgaaa 286  Q
    ||||||||| ||||    
T  2843659 gcgaaaacgcgaaa 2843646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 287
Target Start/End: Complemental strand, 49232161 - 49232045
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    |||||||||| |||| |||| | ||||||||| |||||  ||||||||||| |||||||| ||||||  |||| ||| | | ||||||||||| ||||||    
T  49232161 tggttgaaacatgaaatttt-tatagattatgttagagtcaagtgtcaggatcgtgtaggtgaaaacggcatcaaaatccgattaacggtttgcatttta 49232063  T
Q  270 cgcgcgaaaacgtgaaaa 287  Q
    ||||| |||  |||||||    
T  49232062 cgcgcaaaatggtgaaaa 49232045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 286
Target Start/End: Complemental strand, 3992119 - 3992005
Alignment:
Q  172 gttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacg 271  Q
    |||||||||||||||||||| || | |  ||||| ||||||||||| ||    ||||| ||||||  ||||| |||||| |||||||||||  | ||| |    
T  3992119 gttgaaacttgaatttttctttacactgagatagggctaagtgtcatgaaaacgtaggtgaaaacggcatcggaaacggattaacggtttgattattatg 3992020  T
Q  272 cgcgaaaacgtgaaa 286  Q
    |||||||| ||||||    
T  3992019 cgcgaaaatgtgaaa 3992005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 285
Target Start/End: Complemental strand, 20417862 - 20417784
Alignment:
Q  207 gctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 285  Q
    |||||||||||||| | |||||| ||||||  |||||||||  | ||||| |||||  ||||| |||||||||||||||    
T  20417862 gctaagtgtcaggaacatgtaggtgaaaacggcatcgaaaatagattaacagtttgatttttatgcgcgaaaacgtgaa 20417784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 15045662 - 15045723
Alignment:
Q  175 gaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaac 236  Q
    ||||| |||||||||||||||| | ||| ||| |||||||| |||| || ||||||||||||    
T  15045662 gaaacatgaatttttctgtagaatgtgaaagaactaagtgtaaggaacgcgtaggcgaaaac 15045723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 142; Significance: 2e-74; HSPs: 4)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 123 - 328
Target Start/End: Complemental strand, 75579 - 75374
Alignment:
Q  123 ttttgaaaatgagtgtttatgcaaggttctggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagc 222  Q
    ||||| |||| |||| |||||  |||||||||||| |||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  75579 ttttgcaaataagtgattatgtgaggttctggaaaccgatttttgggtggttgaaacttgaatttttctgtagattattatagagctaaatgtcaggagc 75480  T
Q  223 gtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtcaggcagaaatc 322  Q
    | ||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  75479 gcgtaggcgaaaacggcatcgaaaacgggttaacagtttggattttacgcgcgaaaacgtgaaaattggaaaatctgatgttgtctgtcaggcagaaatc 75380  T
Q  323 gtacta 328  Q
    | ||||    
T  75379 ggacta 75374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 153 - 323
Target Start/End: Complemental strand, 60186 - 60016
Alignment:
Q  153 ggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggt 252  Q
    |||||||||| |||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||    
T  60186 ggaaatcgatttttgggtggttgaaacttgaatctttttgtagattatgatagtgctaagtgtcaggagcgtgtaggcgaaaacggcatcgaaaacgggt 60087  T
Q  253 taacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtcaggcagaaatcg 323  Q
    ||||||||||| |||||| |||||||||||||||||| ||||| ||| |||||||||||  ||||||||||    
T  60086 taacggtttggtttttactcgcgaaaacgtgaaaattagaaaatctgatgttgtctgtcgagcagaaatcg 60016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 123 - 328
Target Start/End: Complemental strand, 72732 - 72524
Alignment:
Q  123 ttttgaaaatgagtgtttatgcaaggttctggaaatcgatatttgggtggttgaaacttgaattttt---ctgtagattatgatagagctaagtgtcagg 219  Q
    ||||| |||| |||| |||||  |||||||||||| |||| |||||||||||||||||||| |||||   ||||||||||| ||||||||||||||||||    
T  72732 ttttgcaaataagtgattatgtgaggttctggaaaccgatttttgggtggttgaaacttgatttttttttctgtagattattatagagctaagtgtcagg 72633  T
Q  220 agcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtcaggcagaa 319  Q
    |||||||||||||||||   || |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||| ||| ||||||||    
T  72632 agcgtgtaggcgaaaacggtattgaaaacgggttaacagtttggattttacgcgcgaaaacgtgaaaattggaaaatctgatgttgtttgtgaggcagaa 72533  T
Q  320 atcgtacta 328  Q
    |||| ||||    
T  72532 atcggacta 72524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 239 - 312
Target Start/End: Original strand, 187619 - 187691
Alignment:
Q  239 catcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtca 312  Q
    |||||||||||| |||||||||||  |||||| |||||||||||| ||||||||||| ||| ||||||||||||    
T  187619 catcgaaaacggattaacggtttgatttttacacgcgaaaacgtg-aaattggaaaatctggtgttgtctgtca 187691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 138; Significance: 4e-72; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 123 - 328
Target Start/End: Complemental strand, 22703764 - 22703559
Alignment:
Q  123 ttttgaaaatgagtgtttatgcaaggttctggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagc 222  Q
    ||||| |||| |||| |||||  ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22703764 ttttgcaaataagtgattatgtgaggttctggaaatcgatttttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagc 22703665  T
Q  223 gtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtcaggcagaaatc 322  Q
    ||||||||||||||  ||||||||| ||||||||| ||||||||||||||||||||||||||| ||| ||||| ||| |||||||||||  |||||||||    
T  22703664 gtgtaggcgaaaacggcatcgaaaatgggttaacgatttggattttacgcgcgaaaacgtgaagattagaaaatctgatgttgtctgtcgagcagaaatc 22703565  T
Q  323 gtacta 328  Q
    | ||||    
T  22703564 ggacta 22703559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 123 - 328
Target Start/End: Original strand, 24087831 - 24088036
Alignment:
Q  123 ttttgaaaatgagtgtttatgcaaggttctggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagc 222  Q
    ||||| |||| |||| |||||  ||||| ||||||| ||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  24087831 ttttgcaaataagtgattatgtgaggttttggaaatagatttttgggtagttgaaacttgaatgtttctgtagattatgatagagctaagtgtcaggagc 24087930  T
Q  223 gtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtcaggcagaaatc 322  Q
    ||||||||||||||  ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||    
T  24087931 gtgtaggcgaaaacggcatcgaaaacgggttgacgatttggattttacgcgcgaaaacgtgaaaattggaaaatcttatgttgtctgtcaggcagaaatc 24088030  T
Q  323 gtacta 328  Q
    | ||||    
T  24088031 ggacta 24088036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 146 - 323
Target Start/End: Original strand, 6477518 - 6477695
Alignment:
Q  146 aggttctggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaa 245  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||  |||| ||    
T  6477518 aggttttggaaatcgatttttgggtggttgaaacttgaatttttctgtagataatgataaggctaagtgtcaggagcgtgtaggcgaaaacggcatcaaa 6477617  T
Q  246 aacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtcaggcagaaatcg 323  Q
    || |||||||||||||||||||||||||||||||||||||| || ||||| ||| |||||| ||||  ||||||||||    
T  6477618 aatgggttaacggtttggattttacgcgcgaaaacgtgaaagttagaaaatctgatgttgtttgtcgagcagaaatcg 6477695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 14 - 267
Target Start/End: Complemental strand, 33127936 - 33127684
Alignment:
Q  14 ttttgggtgagttagacaaattgaattttttgttttgacgttaagaaaatggttgttgagtcgtttgggagaaaacgagagtttcgtgtgaaacttcgat 113  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  33127936 ttttgggtgagttagacaaattgaattttctgttttgactttaagaaaatggttgttgagtcttttggaagaaaacgagagtttcgtgtgaaacttcgat 33127837  T
Q  114 tatgaaccattttgaaaatgagtgtttatgcaaggttctggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagt 213  Q
    | ||||| ||||||||||| ||||||||||  |||||  || |||   | || || |||||| ||| |||| |||||||| || || ||||||| |||||    
T  33127836 tgtgaactattttgaaaataagtgtttatgtgaggtttgggtaatttgttttgggatggttggaacatgaa-ttttctgtggaataagatagagttaagt 33127738  T
Q  214 gtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattt 267  Q
    || |||| || |||| ||||||| | ||| ||| ||| ||||||||||| ||||    
T  33127737 gtaaggaacgcgtagacgaaaacgaaatcaaaatcggattaacggtttgaattt 33127684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 146 - 317
Target Start/End: Original strand, 45617893 - 45618064
Alignment:
Q  146 aggttctggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaa 245  Q
    ||||||||||||||||| || |||||| |||||||||||||||||  ||||||||| || | ||||||  |||||||||||||||||||||  | |||||    
T  45617893 aggttctggaaatcgattttagggtgggtgaaacttgaatttttcaatagattatggtatatctaagttccaggagcgtgtaggcgaaaacggcgtcgaa 45617992  T
Q  246 aacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtcaggcag 317  Q
    ||| | ||||| |||||||||||||||||||||||||||||||||||||| ||| | || ||||||||||||    
T  45617993 aacagattaacagtttggattttacgcgcgaaaacgtgaaaattggaaaatctgatcttatctgtcaggcag 45618064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 164 - 284
Target Start/End: Complemental strand, 19358633 - 19358513
Alignment:
Q  164 tttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttgg 263  Q
    ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| | |||||| |||||||||||||||||| | |||||||||||     
T  19358633 tttgggtggttgaaacttgaatttttctgtatattatgatagagttaagtgtcaggaacatgtaggtgaaaacaacatcgaaaacagattaacggtttga 19358534  T
Q  264 attttacgcgcgaaaacgtga 284  Q
     ||||| | ||||||||||||    
T  19358533 tttttatgagcgaaaacgtga 19358513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 71 - 312
Target Start/End: Original strand, 9653472 - 9653712
Alignment:
Q  71 gagtcgtttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccattttg-aaaatgagtgtttatgcaaggttctggaaatcgatatttggg 169  Q
    |||||||||||| ||||||| |||||||| |||||| |||  || | |||| ||||| ||||||||||||  || |||| | | ||||  ||  || |||    
T  9653472 gagtcgtttgggggaaaacgggagtttcgggtgaaaattcatttgttaaccgttttggaaaatgagtgttg-tgtaaggcttttgaaaatgaatttgggg 9653570  T
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    | |||||||||||||||||||| || |||| |||||| |||||||||| || |  ||||| |||||| ||||||||||||| |||||||||||  |||||    
T  9653571 ttgttgaaacttgaatttttctatacattaagatagaactaagtgtcatgaacacgtaggtgaaaacgacatcgaaaacggattaacggtttgattttta 9653670  T
Q  270 cgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtca 312  Q
    |||||||||||||| ||||||||||| |||  |||||||||||    
T  9653671 cgcgcgaaaacgtg-aaattggaaaatctggcgttgtctgtca 9653712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 155 - 285
Target Start/End: Original strand, 27366844 - 27366973
Alignment:
Q  155 aaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggtta 254  Q
    |||||||| ||||| | |||||||||| | |||||| ||||||||||||||||||| || ||| ||||||||||||||||||  ||||||||||||||||    
T  27366844 aaatcgatttttgg-tagttgaaactttagtttttcggtagattatgatagagctatgtctcatgagcgtgtaggcgaaaacggcatcgaaaacgggtta 27366942  T
Q  255 acggtttggattttacgcgcgaaaacgtgaa 285  Q
    |||||| || |||||||||||||||||||||    
T  27366943 acggttgggtttttacgcgcgaaaacgtgaa 27366973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 170 - 278
Target Start/End: Complemental strand, 34877569 - 34877461
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||  |||||||||| | |||| |||||| ||||||    
T  34877569 tggttgaaacttgaatttctctgtagaatatgatagagctaagtgtcaggagcgtgttggcgaaaacggcatcgaaaacagattaatggtttgaatttta 34877470  T
Q  270 cgcgcgaaa 278  Q
    |||||||||    
T  34877469 cgcgcgaaa 34877461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 184 - 287
Target Start/End: Complemental strand, 20273334 - 20273231
Alignment:
Q  184 atttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtg 283  Q
    |||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||| |||||| |||||||||||||||  |||    
T  20273334 atttttctgtaggttatgatagagttaagtgtcaggagcgcgtaggcgaaaacaacattgaaaacgggttaatggtttgaattttacgcgcgaaatggtg 20273235  T
Q  284 aaaa 287  Q
    ||||    
T  20273234 aaaa 20273231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 173 - 312
Target Start/End: Complemental strand, 19659613 - 19659475
Alignment:
Q  173 ttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgc 272  Q
    |||||| ||||||||||||||| |||||||||| |||||||||||||| | |||||| ||||||  |||||||||| | |||||||||||  ||||| ||    
T  19659613 ttgaaatttgaatttttctgtacattatgatagggctaagtgtcaggaacatgtaggtgaaaacggcatcgaaaacagattaacggtttgatttttatgc 19659514  T
Q  273 gcgaaaacgtgaaaattggaaaaactgttgttgtctgtca 312  Q
    ||||||||||| || || ||||| ||| ||||||||||||    
T  19659513 gcgaaaacgtg-aagtttgaaaatctgatgttgtctgtca 19659475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 187 - 287
Target Start/End: Complemental strand, 16935147 - 16935047
Alignment:
Q  187 tttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaa 286  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  | || ||| | | ||||||||||| |||||| ||||||||  ||||||    
T  16935147 tttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacggcgtcaaaatccgattaacggtttgaattttatgcgcgaaatggtgaaa 16935048  T
Q  287 a 287  Q
    |    
T  16935047 a 16935047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 187 - 287
Target Start/End: Complemental strand, 17005807 - 17005707
Alignment:
Q  187 tttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaa 286  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  | || ||| | | ||||||||||| |||||| ||||||||  ||||||    
T  17005807 tttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacggcgtcaaaatccgattaacggtttgaattttatgcgcgaaatggtgaaa 17005708  T
Q  287 a 287  Q
    |    
T  17005707 a 17005707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 71 - 282
Target Start/End: Original strand, 36891263 - 36891474
Alignment:
Q  71 gagtcgtttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccattttg--aaaatgagtgtttatgcaaggttctggaaatcgatatttgg 168  Q
    ||||||||||||||||| | || |||||| |||||| ||| ||| | |||| |||||  ||||||||||||  || ||||   ||||||  || ||| ||    
T  36891263 gagtcgtttgggagaaatc-agggtttcgggtgaaaattcaattgttaaccgttttggaaaaatgagtgttg-tgtaaggccttggaaaatgaaattggg 36891360  T
Q  169 gtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttt 268  Q
    || ||||||||||||||||||||||| |||| ||||| ||||||||||| || |  ||||| ||||||  ||||||||| || |||||||||||  ||||    
T  36891361 gttgttgaaacttgaatttttctgtacattaagatagggctaagtgtcatgaacacgtaggtgaaaacggcatcgaaaatggattaacggtttgagtttt 36891460  T
Q  269 acgcgcgaaaacgt 282  Q
    | ||||||||||||    
T  36891461 atgcgcgaaaacgt 36891474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 77 - 312
Target Start/End: Original strand, 21274641 - 21274875
Alignment:
Q  77 tttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccattttg-aaaatgagtgtttatgcaaggttctggaaatcgatatttg-ggtggtt 174  Q
    |||||||||||||| ||||||||||||||| |||  || | |||| ||||| ||||| ||||||| ||  ||||| || |||  || ||||| ||| |||    
T  21274641 tttgggagaaaacgggagtttcgtgtgaaaattcatttgttaaccgttttggaaaataagtgtttgtgtgaggtt-tgtaaaatga-atttgaggttgtt 21274738  T
Q  175 gaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgc 274  Q
    ||||||   ||||||||||  ||| |||||| ||||||||| |||||| |||||||||||||  ||||||||| || |||||||||||  ||||| ||||    
T  21274739 gaaactgagatttttctgtgcattgtgatagtgctaagtgttaggagcatgtaggcgaaaacggcatcgaaaatggattaacggtttgatttttatgcgc 21274838  T
Q  275 gaaaacgtgaaaattggaaaaactgttgttgtctgtca 312  Q
    |||||||| | || | ||||| ||| ||||||||||||    
T  21274839 gaaaacgt-agaagttgaaaatctgatgttgtctgtca 21274875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 123 - 236
Target Start/End: Complemental strand, 24383442 - 24383329
Alignment:
Q  123 ttttgaaaatgagtgtttatgcaaggttctggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagc 222  Q
    ||||| |||| |||| |||||  ||||||||||||   || || || | |||||||||||||||| |||||||| |||||||||||||||||| ||||||    
T  24383442 ttttgcaaataagtgattatgtgaggttctggaaaattattttgggatagttgaaacttgaatttctctgtagaatatgatagagctaagtgttaggagc 24383343  T
Q  223 gtgtaggcgaaaac 236  Q
    ||||||||||||||    
T  24383342 gtgtaggcgaaaac 24383329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 170 - 283
Target Start/End: Original strand, 42178489 - 42178601
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    |||||||||| |||| || | ||||||||||||||| || |||||| |||||| |||||||||||||  |||||||||||| |||||||||||  |||||    
T  42178489 tggttgaaacatgaaattct-tgtagattatgatagtgccaagtgttaggagcatgtaggcgaaaacggcatcgaaaacggattaacggtttgattttta 42178587  T
Q  270 cgcgcgaaaacgtg 283  Q
     |||||||||||||    
T  42178588 tgcgcgaaaacgtg 42178601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 170 - 282
Target Start/End: Original strand, 12642170 - 12642281
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    |||||||||| |||| |||| |||| |||||||||| || |||||| |||||| |||||||||||||  |||||||||||| |||||||||||  |||||    
T  12642170 tggttgaaacatgaaatttt-tgtaaattatgatagtgccaagtgttaggagcatgtaggcgaaaacggcatcgaaaacggattaacggtttgattttta 12642268  T
Q  270 cgcgcgaaaacgt 282  Q
     ||||||||||||    
T  12642269 tgcgcgaaaacgt 12642281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 170 - 279
Target Start/End: Original strand, 12636396 - 12636504
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    |||||||||| |||| |||| ||||||||||||||| || |||||| |||||| |||||||| ||||  |||||||||||| |||||||||||  |||||    
T  12636396 tggttgaaacatgaaatttt-tgtagattatgatagtgccaagtgttaggagcatgtaggcggaaacggcatcgaaaacggattaacggtttgattttta 12636494  T
Q  270 cgcgcgaaaa 279  Q
     |||||||||    
T  12636495 tgcgcgaaaa 12636504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 287
Target Start/End: Complemental strand, 12728218 - 12727998
Alignment:
Q  68 gttgagtcgtttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccatttt-gaaaatgagtgtttatgcaaggttctggaaatcgatattt 166  Q
    ||||||||||||||||||||||| |  ||||||||||||  |||||  | || | |||| |  ||| |||| |||||  ||||| ||||||  ||  |||    
T  12728218 gttgagtcgtttgggagaaaacgggtttttcgtgtgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaatgactttt 12728119  T
Q  167 ggg-tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggat 265  Q
    ||| ||||| |||| |||| |||| ||||||| ||| |||||  |||||||||||||||||||||||||||  |||| ||| | | ||||||||||| ||    
T  12728118 gggatggttaaaacatgaaatttt-tgtagatcatgttagagtcaagtgtcaggagcgtgtaggcgaaaacggcatcaaaatccgattaacggtttgaat 12728020  T
Q  266 tttacgcgcgaaaacgtgaaaa 287  Q
    |||||||||||||  |||||||    
T  12728019 tttacgcgcgaaatggtgaaaa 12727998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 287
Target Start/End: Complemental strand, 34824277 - 34824057
Alignment:
Q  68 gttgagtcgtttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccatttt-gaaaatgagtgtttatgcaaggttctggaaatcgatattt 166  Q
    |||||||| |||||||||||||| |  ||||||||||||  |||||  | || | |||| |  ||| |||| ||||| |||||| ||||||  ||  |||    
T  34824277 gttgagtcctttgggagaaaacgggtttttcgtgtgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtaaggttttggaaaatgactttt 34824178  T
Q  167 ggg-tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggat 265  Q
    ||| |||||||||| |||| |||| | ||||||||| |||||  |||||||||||||||||||||||||||  |||| ||| |   ||||||||||| ||    
T  34824177 gggatggttgaaacatgaaatttt-tatagattatgttagagtcaagtgtcaggagcgtgtaggcgaaaacggcatcaaaatccaattaacggtttgaat 34824079  T
Q  266 tttacgcgcgaaaacgtgaaaa 287  Q
    |||||||||||||  |||||||    
T  34824078 tttacgcgcgaaatggtgaaaa 34824057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 170 - 282
Target Start/End: Original strand, 3799131 - 3799242
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    |||||||||| |||| |||| |||| | |||||||| || |||||| |||||| |||||||||||||  |||||||||||| |||||||||||  |||||    
T  3799131 tggttgaaacatgaaatttt-tgtaaaatatgatagtgccaagtgttaggagcatgtaggcgaaaacggcatcgaaaacggattaacggtttgattttta 3799229  T
Q  270 cgcgcgaaaacgt 282  Q
     ||||||||||||    
T  3799230 tgcgcgaaaacgt 3799242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 177 - 285
Target Start/End: Original strand, 23822247 - 23822355
Alignment:
Q  177 aacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcga 276  Q
    |||||||||||||||||| |||| ||||| ||||||||||| || | |||||| ||||||  |||||||||||| |||||||||||  | ||| || |||    
T  23822247 aacttgaatttttctgtacattaagatagggctaagtgtcatgaacatgtaggtgaaaacggcatcgaaaacggattaacggtttgattgttatgctcga 23822346  T
Q  277 aaacgtgaa 285  Q
    |||||||||    
T  23822347 aaacgtgaa 23822355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 177 - 285
Target Start/End: Original strand, 23831326 - 23831434
Alignment:
Q  177 aacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcga 276  Q
    |||||||||||||||||| |||| ||||| ||||||||||| || | |||||| ||||||  |||||||||||| |||||||||||  | ||| || |||    
T  23831326 aacttgaatttttctgtacattaagatagggctaagtgtcatgaacatgtaggtgaaaacggcatcgaaaacggattaacggtttgattgttatgctcga 23831425  T
Q  277 aaacgtgaa 285  Q
    |||||||||    
T  23831426 aaacgtgaa 23831434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 170 - 288
Target Start/End: Original strand, 43707353 - 43707464
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    ||||||| ||||||||||  |||||||||| |||||||| ||||||||| ||||||||||||||||| ||||| ||      ||||||||||| ||||||    
T  43707353 tggttgagacttgaatttg-ctgtagattaagatagagccaagtgtcagaagcgtgtaggcgaaaacgacatcaaa------ttaacggtttgaatttta 43707445  T
Q  270 cgcgcgaaaacgtgaaaat 288  Q
    |||||||||  ||||||||    
T  43707446 cgcgcgaaatggtgaaaat 43707464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 170 - 279
Target Start/End: Complemental strand, 8943574 - 8943466
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    |||||||||| |||| |||| ||||||||||||||| || |||||| |||||| |||||||| |||| |||||||||| ||  ||||||||||  |||||    
T  8943574 tggttgaaacatgaaatttt-tgtagattatgatagtgccaagtgttaggagcatgtaggcggaaacgacatcgaaaatggagtaacggtttgattttta 8943476  T
Q  270 cgcgcgaaaa 279  Q
     |||||||||    
T  8943475 tgcgcgaaaa 8943466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 191 - 288
Target Start/End: Complemental strand, 28349887 - 28349790
Alignment:
Q  191 tgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 288  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||  |||| ||| | | ||||||||| | |||||| ||||||||  ||||||||    
T  28349887 tgtagattatgatagagccaagtgtcaggagagtgtaggcgaaaacggcatcaaaatccgattaacggttggaattttatgcgcgaaatggtgaaaat 28349790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 68 - 287
Target Start/End: Original strand, 28776235 - 28776455
Alignment:
Q  68 gttgagtcgtttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccatttt-gaaaatgagtgtttatgcaaggttctggaaatcgatattt 166  Q
    ||||||||||||||||||||||| |  ||||||||||||  |||||  | || | |||| |  ||| |||| |||||  ||||| ||||||  ||  |||    
T  28776235 gttgagtcgtttgggagaaaacgggtttttcgtgtgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaatgactttt 28776334  T
Q  167 ggg-tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggat 265  Q
    ||| |||||||||| |||| |||| | ||||||||| |||||  ||||||||||| |||||||| ||||||  |||| ||| | | ||||||||||| ||    
T  28776335 gggatggttgaaacatgaaatttt-tatagattatgttagagtcaagtgtcaggatcgtgtaggtgaaaacggcatcaaaatccgattaacggtttgcat 28776433  T
Q  266 tttacgcgcgaaaacgtgaaaa 287  Q
    |||||||||||||  |||||||    
T  28776434 tttacgcgcgaaatagtgaaaa 28776455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 193 - 288
Target Start/End: Complemental strand, 21245402 - 21245307
Alignment:
Q  193 tagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 288  Q
    |||||||||||||||| |||||||||||| ||||||||||||||  || | ||| | | ||||||||| | |||||||||||||||  ||||||||    
T  21245402 tagattatgatagagccaagtgtcaggagagtgtaggcgaaaacggcaccaaaatccgattaacggttggaattttacgcgcgaaatggtgaaaat 21245307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 288
Target Start/End: Original strand, 24273362 - 24273460
Alignment:
Q  190 ctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 288  Q
    ||||||||||||||||||| ||||||||| || ||||||||||||||  |||| ||| | | ||||||||| | ||||||||| |||||  ||||||||    
T  24273362 ctgtagattatgatagagccaagtgtcagaagagtgtaggcgaaaacggcatcaaaatccgattaacggttggaattttacgcacgaaatggtgaaaat 24273460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 68 - 287
Target Start/End: Original strand, 11231766 - 11231986
Alignment:
Q  68 gttgagtcgtttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccatttt-gaaaatgagtgtttatgcaaggttctggaaatcgatattt 166  Q
    ||||||||||||||||||||||| |  ||||||||||||  |||||  | || | |||| |  ||| |||| |||||  ||||| ||||||  ||  |||    
T  11231766 gttgagtcgtttgggagaaaacgggtttttcgtgtgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaatgactttt 11231865  T
Q  167 ggg-tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggat 265  Q
    ||| |||||||||| |||| |||| | ||||||||| |||||  ||||||||||| | |||||| ||||||  |||| ||| | | ||||||||||| ||    
T  11231866 gggatggttgaaacatgaaatttt-tatagattatgttagagtcaagtgtcaggatcatgtaggtgaaaacggcatcaaaatccgattaacggtttgcat 11231964  T
Q  266 tttacgcgcgaaaacgtgaaaa 287  Q
    |||||||||||||  |||||||    
T  11231965 tttacgcgcgaaatggtgaaaa 11231986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 170 - 287
Target Start/End: Original strand, 24686313 - 24686429
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    |||||||||| |||| |||| | ||||||||| |||||  ||||||||||| |||||||| ||||||  |||| ||| | | ||||||||||| ||||||    
T  24686313 tggttgaaacatgaaatttt-tatagattatgttagagtcaagtgtcaggatcgtgtaggtgaaaacggcatcaaaatccgattaacggtttgcatttta 24686411  T
Q  270 cgcgcgaaaacgtgaaaa 287  Q
    |||||||||  |||||||    
T  24686412 cgcgcgaaatggtgaaaa 24686429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 187 - 287
Target Start/End: Original strand, 22775717 - 22775817
Alignment:
Q  187 tttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaa 286  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||||||  |||| |||   | |||| |||||| ||| |||||||||||  ||||||    
T  22775717 tttctgtagattatcttagagttaagtgtcaggagcgtgtaggcgaaaacggcatcaaaattcgattaatggtttgaattatacgcgcgaaatggtgaaa 22775816  T
Q  287 a 287  Q
    |    
T  22775817 a 22775817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 187 - 287
Target Start/End: Original strand, 22781095 - 22781195
Alignment:
Q  187 tttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaa 286  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||||||  |||| |||   | |||| |||||| ||| |||||||||||  ||||||    
T  22781095 tttctgtagattatcttagagttaagtgtcaggagcgtgtaggcgaaaacggcatcaaaattcgattaatggtttgaattatacgcgcgaaatggtgaaa 22781194  T
Q  287 a 287  Q
    |    
T  22781195 a 22781195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 287
Target Start/End: Complemental strand, 22283681 - 22283565
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    |||||||||| ||||  ||| ||||||||||| |||||  ||||||| ||||||| |||||||||||  |||| ||| | | ||||||||||  ||||||    
T  22283681 tggttgaaacatgaaacttt-tgtagattatgttagagtcaagtgtccggagcgtataggcgaaaacggcatcaaaatccgattaacggtttaaatttta 22283583  T
Q  270 cgcgcgaaaacgtgaaaa 287  Q
    |||||||||  |||||||    
T  22283582 cgcgcgaaatggtgaaaa 22283565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 287
Target Start/End: Original strand, 22513717 - 22513833
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    |||||||||| |||| |||| | ||||||||| |||||  ||||||||||| | |||||| ||||||  |||| ||| | | ||||||||||| ||||||    
T  22513717 tggttgaaacatgaaatttt-tatagattatgttagagtcaagtgtcaggatcatgtaggtgaaaacggcatcaaaatccgattaacggtttgcatttta 22513815  T
Q  270 cgcgcgaaaacgtgaaaa 287  Q
    |||||||||  |||||||    
T  22513816 cgcgcgaaatggtgaaaa 22513833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 170 - 287
Target Start/End: Complemental strand, 22274448 - 22274332
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    |||||||||| ||||  ||| ||||||||||| || ||  ||| ||| ||||||| |||||||||||| |||| ||| | | ||||||||||| ||||||    
T  22274448 tggttgaaacatgaaacttt-tgtagattatgttacagtcaagggtccggagcgtataggcgaaaacagcatcaaaatccgattaacggtttgaatttta 22274350  T
Q  270 cgcgcgaaaacgtgaaaa 287  Q
    |||| ||||  |||||||    
T  22274349 cgcgtgaaatggtgaaaa 22274332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 139
Target Start/End: Complemental strand, 19659714 - 19659645
Alignment:
Q  71 gagtcgtttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccatttt-gaaaatgagtgtt 139  Q
    ||||||||||||||||| || ||||||||||||||| ||  ||| | |||| |||| |||||||||||||    
T  19659714 gagtcgtttgggagaaatcgggagtttcgtgtgaaaattgaattgttaaccgttttggaaaatgagtgtt 19659645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 137; Significance: 2e-71; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 123 - 323
Target Start/End: Complemental strand, 147412 - 147212
Alignment:
Q  123 ttttgaaaatgagtgtttatgcaaggttctggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagc 222  Q
    ||||| |||| |||| |||||  |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  147412 ttttgcaaataagtgattatgtgaggttctggaaatcgattgttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagc 147313  T
Q  223 gtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtcaggcagaaatc 322  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||| ||| |||||||||||  |||||||||    
T  147312 gtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttatgcgcgaaaacgtgaagattagaaaatctgatgttgtctgtcgagcagaaatc 147213  T
Q  323 g 323  Q
    |    
T  147212 g 147212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 173 - 283
Target Start/End: Complemental strand, 87862 - 87752
Alignment:
Q  173 ttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgc 272  Q
    |||||||||||||||||||||| |||| ||||| ||||||||||| || |  ||||| ||||||  |||||||||||| |||||||||||  ||||| ||    
T  87862 ttgaaacttgaatttttctgtacattaagatagggctaagtgtcatgaacacgtaggtgaaaacggcatcgaaaacggattaacggtttgatttttatgc 87763  T
Q  273 gcgaaaacgtg 283  Q
    |||||||||||    
T  87762 gcgaaaacgtg 87752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 137; Significance: 2e-71; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 123 - 323
Target Start/End: Original strand, 2584407 - 2584607
Alignment:
Q  123 ttttgaaaatgagtgtttatgcaaggttctggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagc 222  Q
    ||||| |||| |||| |||||  ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2584407 ttttgcaaataagtgattatgtgaggttctggaaatcgatttttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagc 2584506  T
Q  223 gtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtcaggcagaaatc 322  Q
    ||||||||||||||  ||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||| |||  |||||||||    
T  2584507 gtgtaggcgaaaacggcatcgtaaatgggttaacggtttggattttacgcgcgaaaacgtgaaaattagaaaatctgatgttgtcagtcgagcagaaatc 2584606  T
Q  323 g 323  Q
    |    
T  2584607 g 2584607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 123 - 323
Target Start/End: Original strand, 4830420 - 4830620
Alignment:
Q  123 ttttgaaaatgagtgtttatgcaaggttctggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagc 222  Q
    ||||| |||| |||| |||||  |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4830420 ttttgcaaataagtgattatgtgaggttctggaaatcaatttttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagc 4830519  T
Q  223 gtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtcaggcagaaatc 322  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||| ||| |||||||||||  |||||||||    
T  4830520 gtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttatgcgcgaaaacgtgaagattagaaaatctgatgttgtctgtcgagcagaaatc 4830619  T
Q  323 g 323  Q
    |    
T  4830620 g 4830620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 123 - 323
Target Start/End: Original strand, 4833715 - 4833915
Alignment:
Q  123 ttttgaaaatgagtgtttatgcaaggttctggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagc 222  Q
    ||||| |||| |||| |||||  |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4833715 ttttgcaaataagtgattatgtgaggttctggaaatcaatttttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagc 4833814  T
Q  223 gtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtcaggcagaaatc 322  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||| ||| |||||||||||  |||||||||    
T  4833815 gtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttatgcgcgaaaacgtgaagattagaaaatctgatgttgtctgtcgagcagaaatc 4833914  T
Q  323 g 323  Q
    |    
T  4833915 g 4833915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 123 - 321
Target Start/End: Complemental strand, 18230529 - 18230331
Alignment:
Q  123 ttttgaaaatgagtgtttatgcaaggttctggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagc 222  Q
    ||||| |||| |||| |||||  ||||||||||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  18230529 ttttgcaaataagtgattatgtgaggttctggaaattgatttttgggtggttgaaacttgaatttttctgtagattacgatagagctaagtgtcaggagc 18230430  T
Q  223 gtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtcaggcagaaat 321  Q
    || ||||||||||| ||||||||||||||||||||  |||||||||| | |||||||||||||||||  |||| ||| |||||||||||  ||||||||    
T  18230429 gtttaggcgaaaacgacatcgaaaacgggttaacgcattggattttaagtgcgaaaacgtgaaaattaaaaaatctgatgttgtctgtcgagcagaaat 18230331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 154 - 310
Target Start/End: Complemental strand, 13447288 - 13447132
Alignment:
Q  154 gaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggtt 253  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||| |||| |||||    
T  13447288 gaaatcgatttttgggtggttgaaacttgaatttttctgtagattatgatagagataagtgtcaggagcgtgtaggcgaaaacggcatcaaaaatgggtt 13447189  T
Q  254 aacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgt 310  Q
    ||| |||||||||||||||||||||||||||||||| ||||| ||| ||||||||||    
T  13447188 aacagtttggattttacgcgcgaaaacgtgaaaattagaaaatctgatgttgtctgt 13447132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 155 - 311
Target Start/End: Original strand, 14931418 - 14931573
Alignment:
Q  155 aaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggtta 254  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||||||  |||| |||||||||||    
T  14931418 aaatcgatttttgggtggttgaaacttgaatttttctatagattatgatagagccaagtgtcaggagcgggtaggcgaaaacggcatcaaaaacgggtta 14931517  T
Q  255 acggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtc 311  Q
    ||||||||| ||||||||| |||||||||||  |||| ||| ||| |||||||||||    
T  14931518 acggtttggtttttacgcgtgaaaacgtgaaggttgg-aaatctgatgttgtctgtc 14931573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 153 - 279
Target Start/End: Complemental strand, 6512382 - 6512256
Alignment:
Q  153 ggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggt 252  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||||  ||||||||||||||    
T  6512382 ggaaatcgatttttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtttcaggagcatataggcgaaaacggcatcgaaaacgggt 6512283  T
Q  253 taacggtttggattttacgcgcgaaaa 279  Q
    |||||||||||||| |||||| |||||    
T  6512282 taacggtttggattctacgcgtgaaaa 6512256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 123 - 285
Target Start/End: Complemental strand, 14281037 - 14280875
Alignment:
Q  123 ttttgaaaatgagtgtttatgcaaggttctggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagc 222  Q
    ||||| ||||||||| |||||  ||||| |||||| |||| |||||||||||||||||  |||||||||||||||| ||||||||||| |||||||||||    
T  14281037 ttttgcaaatgagtgattatgtgaggttttggaaaccgatttttgggtggttgaaactgaaatttttctgtagattgtgatagagctatgtgtcaggagc 14280938  T
Q  223 gtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 285  Q
    | ||||||||||||  ||||||||||||||||||||||||  ||||| |||||||||||||||    
T  14280937 gcgtaggcgaaaacggcatcgaaaacgggttaacggtttgatttttaggcgcgaaaacgtgaa 14280875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 123 - 285
Target Start/End: Complemental strand, 22354467 - 22354305
Alignment:
Q  123 ttttgaaaatgagtgtttatgcaaggttctggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagc 222  Q
    ||||| |||| |||| |||||  ||||| |||||| |||| ||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||    
T  22354467 ttttgcaaataagtgattatgtgaggttttggaaaccgatttttgggtggtttaaacttgaatttttctatagattatgatagggctaagtgtcaggagc 22354368  T
Q  223 gtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 285  Q
    || |||||||||||  ||||||||||||||||||||||||| ||||| | |||||||||||||    
T  22354367 gtttaggcgaaaacggcatcgaaaacgggttaacggtttggtttttaagagcgaaaacgtgaa 22354305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 146 - 285
Target Start/End: Original strand, 54798192 - 54798331
Alignment:
Q  146 aggttctggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaa 245  Q
    ||||| |||||| |||| ||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||  |||||||    
T  54798192 aggttttggaaaccgatttttgggtggttgaaactggaatttttctgtagattgtgatagagctatgtgtcaggagcgcgtaggcgaaaacggcatcgaa 54798291  T
Q  246 aacgggttaacggtttggattttacgcgcgaaaacgtgaa 285  Q
    |||||||||||||||||  ||||| |||||||||||||||    
T  54798292 aacgggttaacggtttgttttttaggcgcgaaaacgtgaa 54798331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 153 - 294
Target Start/End: Original strand, 4615344 - 4615485
Alignment:
Q  153 ggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggt 252  Q
    ||||||| || ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||| ||| ||    
T  4615344 ggaaatcaatttttaggtggttgaaacttcaatttttctgtagattatgatagagctaagtgtcaggtgcgtgtaggcgaaaacggcatcgaagacgagt 4615443  T
Q  253 taacggtttggattttacgcgcgaaaacgtgaaaattggaaa 294  Q
    ||||||||||| ||||| |||||||||||||||  |||||||    
T  4615444 taacggtttggtttttatgcgcgaaaacgtgaaggttggaaa 4615485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 158 - 262
Target Start/End: Complemental strand, 15368284 - 15368180
Alignment:
Q  158 tcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacg 257  Q
    ||||| |||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  15368284 tcgatttttgggtggttgaaacttgaatctttttgtagattatgatagggctaagtgtcaggagcgtgtaggcgaaaacgacatcgaaaacgggttaacg 15368185  T
Q  258 gtttg 262  Q
    |||||    
T  15368184 gtttg 15368180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 153 - 284
Target Start/End: Complemental strand, 16224138 - 16224007
Alignment:
Q  153 ggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggt 252  Q
    |||||||||  |||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||||||    
T  16224138 ggaaatcgagttttgggtggttgaaacttgaatctttttgtagattatgatagggctaagtgtcaggagcgtgtagacgaaaacgacatcgaaaacgggt 16224039  T
Q  253 taacggtttggattttacgcgcgaaaacgtga 284  Q
    ||||||||||  ||||| |  |||||||||||    
T  16224038 taacggtttgatttttatgtccgaaaacgtga 16224007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 146 - 285
Target Start/End: Original strand, 20899032 - 20899171
Alignment:
Q  146 aggttctggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaa 245  Q
    ||||| |||| |||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||| ||| |||||| |||||||||||  |||||||    
T  20899032 aggttttggagatcgatttttgggtggttgaagcttgaatttttctatagattatgatagagctaagtttcatgagcgtttaggcgaaaacggcatcgaa 20899131  T
Q  246 aacgggttaacggtttggattttacgcgcgaaaacgtgaa 285  Q
    |||||||||||||||||  ||||| | |||||||||||||    
T  20899132 aacgggttaacggtttgatttttatgtgcgaaaacgtgaa 20899171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 153 - 285
Target Start/End: Complemental strand, 27028505 - 27028376
Alignment:
Q  153 ggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggt 252  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||    
T  27028505 ggaaatcaatttttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtttaggcgaaaacggcatcgaaaacgggt 27028406  T
Q  253 taacggtttggattttacgcgcgaaaacgtgaa 285  Q
       |||||||  ||||| | |||||||||||||    
T  27028405 ---cggtttgatttttatgtgcgaaaacgtgaa 27028376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 71 - 285
Target Start/End: Original strand, 52266107 - 52266322
Alignment:
Q  71 gagtcgtttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccattttg--aaaatgagtgtttatgcaaggttctggaaatcgatatttgg 168  Q
    ||||||||||||||||| || |||||||| |||||| ||| ||| | |||| |||||  ||||||||||||| || |||| | ||||||  ||  || ||    
T  52266107 gagtcgtttgggagaaatcgggagtttcgggtgaaaattcaattgttaaccgttttggaaaaatgagtgtttgtgtaaggctttggaaaatgaatttggg 52266206  T
Q  169 gtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttt 268  Q
    || ||||||||||||||||| ||||| |||| ||||| ||||||||||| || | |||||| |||||| ||||||||||||| |||||||||||  ||||    
T  52266207 gttgttgaaacttgaatttt-ctgtacattaagatagggctaagtgtcatgaacatgtaggtgaaaacgacatcgaaaacggattaacggtttgattttt 52266305  T
Q  269 acgcgcgaaaacgtgaa 285  Q
    | |||||||||||||||    
T  52266306 atgcgcgaaaacgtgaa 52266322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 153 - 285
Target Start/End: Complemental strand, 16157553 - 16157422
Alignment:
Q  153 ggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggt 252  Q
    |||||||||| ||||| | |||||||||||| |||||| |||||||||||||| |||| || ||| ||||||||||||||||||  ||||||||||||||    
T  16157553 ggaaatcgatttttgg-tagttgaaacttgagtttttcggtagattatgatagtgctatgtctcatgagcgtgtaggcgaaaacggcatcgaaaacgggt 16157455  T
Q  253 taacggtttggattttacgcgcgaaaacgtgaa 285  Q
    ||||||||||| ||||| |||||||||||||||    
T  16157454 taacggtttggtttttatgcgcgaaaacgtgaa 16157422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 158 - 262
Target Start/End: Complemental strand, 15403296 - 15403193
Alignment:
Q  158 tcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacg 257  Q
    ||||| ||||||||| |||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  15403296 tcgatttttgggtgggtgaaacttgaatctttttgtagattatgatagggctaagtgtcaggagcgtgtaggcgaaaacgacatcgaaaacggg-taacg 15403198  T
Q  258 gtttg 262  Q
    |||||    
T  15403197 gtttg 15403193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 71 - 312
Target Start/End: Original strand, 30233095 - 30233336
Alignment:
Q  71 gagtcgtttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccattttg--aaaatgagtgtttatgcaaggttctggaaatcgatatttgg 168  Q
    ||||||||||||||||| || |||||||  |||||| ||| ||| | |||| |||||  ||||||||||||| || |||| | ||||||  ||  || ||    
T  30233095 gagtcgtttgggagaaatcgggagtttcaggtgaaaattcaattgttaaccgttttggaaaaatgagtgtttgtgtaaggctttggaaaatgaatttggg 30233194  T
Q  169 gtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttt 268  Q
    || |||||| |||||||||||||||| |||| ||||| ||||||||||| || | |||||| ||||||  |||||||||||| |||||||||||  ||||    
T  30233195 gttgttgaa-cttgaatttttctgtacattaagatagggctaagtgtcaagaacatgtaggtgaaaacggcatcgaaaacggattaacggtttgattttt 30233293  T
Q  269 acgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtca 312  Q
    | ||||||||||||||| ||| ||||| ||| || |||||||||    
T  30233294 atgcgcgaaaacgtgaagatt-gaaaatctggtgctgtctgtca 30233336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 153 - 285
Target Start/End: Complemental strand, 15374090 - 15373958
Alignment:
Q  153 ggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggt 252  Q
    ||||||| || |||||||||||||||||||||| ||| | ||||||||||||  |||||||||||||| |||||||| ||||||  ||||||||||||||    
T  15374090 ggaaatcaatttttgggtggttgaaacttgaatctttttatagattatgataaggctaagtgtcaggaacgtgtaggtgaaaacggcatcgaaaacgggt 15373991  T
Q  253 taacggtttggattttacgcgcgaaaacgtgaa 285  Q
    ||||  ||||  ||||| |  ||||||||||||    
T  15373990 taaccatttgatttttatgtccgaaaacgtgaa 15373958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 172 - 280
Target Start/End: Original strand, 26921778 - 26921886
Alignment:
Q  172 gttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacg 271  Q
    ||||||||||||||||||||||| | |||||||| |||||||||||||| | |||||| |||||| ||||||||||| | |||||||||||  ||||| |    
T  26921778 gttgaaacttgaatttttctgtacaatatgatagtgctaagtgtcaggaacatgtaggtgaaaacgacatcgaaaacagattaacggtttgatttttatg 26921877  T
Q  272 cgcgaaaac 280  Q
    |||||||||    
T  26921878 cgcgaaaac 26921886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 153 - 288
Target Start/End: Complemental strand, 10705491 - 10705357
Alignment:
Q  153 ggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggt 252  Q
    |||||||||| || | |||||||| ||||||| |  | |||||||||||||||||| |||||||||||| |||||||||||||| ||||| ||| | | |    
T  10705491 ggaaatcgattttggagtggttgagacttgaaatagt-tgtagattatgatagagccaagtgtcaggagagtgtaggcgaaaacgacatcaaaatccgat 10705393  T
Q  253 taacggtttggattttacgcgcgaaaacgtgaaaat 288  Q
    |||||||||| |||||||||||||||  ||||||||    
T  10705392 taacggtttgaattttacgcgcgaaatggtgaaaat 10705357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 153 - 288
Target Start/End: Complemental strand, 10919261 - 10919127
Alignment:
Q  153 ggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggt 252  Q
    |||||||||| || | |||||||| ||||||| |  | |||||||||||||||||| |||||||||||| |||||||||||||| ||||| ||| | | |    
T  10919261 ggaaatcgattttggagtggttgagacttgaaatagt-tgtagattatgatagagccaagtgtcaggagagtgtaggcgaaaacgacatcaaaatccgat 10919163  T
Q  253 taacggtttggattttacgcgcgaaaacgtgaaaat 288  Q
    |||||||||| |||||||||||||||  ||||||||    
T  10919162 taacggtttgaattttacgcgcgaaatggtgaaaat 10919127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 189 - 278
Target Start/End: Original strand, 15214137 - 15214226
Alignment:
Q  189 tctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaa 278  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||  |||| ||| | | ||||||||||| |||||||||||||||    
T  15214137 tctgtagattatgatagagccaagtgtcaggagcgtgtaggcgaaaacggcatcaaaatccgattaacggtttgaattttacgcgcgaaa 15214226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 129 - 269
Target Start/End: Original strand, 19622552 - 19622693
Alignment:
Q  129 aaatgagtgtttatgcaaggttctggaaatcgatatttggg-tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgta 227  Q
    |||| |||| |||||  ||||| ||||||  ||| |||||| |||||||||||| ||||||||| ||||||||||||||| ||||||| | |||||||||    
T  19622552 aaataagtgattatgtgaggttttggaaaatgatttttgggatggttgaaacttcaatttttctatagattatgatagagttaagtgttaagagcgtgta 19622651  T
Q  228 ggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    ||||||||| ||||| ||| | | ||||||||||| ||||||    
T  19622652 ggcgaaaacgacatcaaaatccgattaacggtttgaatttta 19622693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 187 - 287
Target Start/End: Original strand, 5683073 - 5683173
Alignment:
Q  187 tttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaa 286  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  | || ||| | | ||||||||||| |||||| ||||||||  ||||||    
T  5683073 tttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacggcgtcaaaatccgattaacggtttgaattttatgcgcgaaatggtgaaa 5683172  T
Q  287 a 287  Q
    |    
T  5683173 a 5683173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 164 - 236
Target Start/End: Complemental strand, 15371786 - 15371714
Alignment:
Q  164 tttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaac 236  Q
    ||||||| |||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  15371786 tttgggtagttgaaacttgaatctttttgtagattatgatagggctaagtgtcaggagcgtgtaggcgaaaac 15371714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 71 - 285
Target Start/End: Original strand, 15851942 - 15852157
Alignment:
Q  71 gagtcgtttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccattttg-aaaatgagtgtttatgcaaggttctggaaa-tcgatatttgg 168  Q
    ||||||||||| |||||||| |||||||  |||||| ||| ||| | |||||||||| ||||||||||||| || |||| | |||||| | ||| || ||    
T  15851942 gagtcgtttggaagaaaacgggagtttcaggtgaaaattcaattgttaaccattttggaaaatgagtgtttgtgtaaggctttggaaaatggat-ttggg 15852040  T
Q  169 gtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttt 268  Q
    || |||||||||||| ||||| |||| |||| ||||| ||||||||||| || | |||||| ||||||  |||||||||||| |||||  ||||  ||||    
T  15852041 gttgttgaaacttgattttttatgtacattaagatagggctaagtgtcatgaacatgtaggtgaaaacggcatcgaaaacggattaacaatttgattttt 15852140  T
Q  269 acgcgcgaaaacgtgaa 285  Q
    | |||| |||| |||||    
T  15852141 atgcgcaaaaatgtgaa 15852157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 170 - 282
Target Start/End: Original strand, 7132593 - 7132704
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    |||||||||| |||| |||| ||||||||||||||| || |||||| |||||| |||||||||||||   ||||||||||| |||||||||||  |||||    
T  7132593 tggttgaaacatgaaatttt-tgtagattatgatagtgccaagtgttaggagcatgtaggcgaaaacggtatcgaaaacggattaacggtttgattttta 7132691  T
Q  270 cgcgcgaaaacgt 282  Q
     ||||||||||||    
T  7132692 tgcgcgaaaacgt 7132704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 278
Target Start/End: Original strand, 13043280 - 13043384
Alignment:
Q  174 tgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcg 273  Q
    ||||||||||| || ||||||||||||||||||| ||||||| | ||||| |||||| |||||  |||||||||||| ||||  |||||||||||||||     
T  13043280 tgaaacttgaaattctctgtagattatgatagagttaagtgttaagagcgcgtaggcaaaaacggcatcgaaaacggattaatagtttggattttacgca 13043379  T
Q  274 cgaaa 278  Q
    |||||    
T  13043380 cgaaa 13043384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 170 - 282
Target Start/End: Complemental strand, 20000451 - 20000340
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    |||||||||| |||| |||| |||| |||||||||| || |||||| |||||| |||||||||||||  |||||||||||| |||||||||||  |||||    
T  20000451 tggttgaaacatgaaatttt-tgtaaattatgatagtgccaagtgttaggagcatgtaggcgaaaacggcatcgaaaacggattaacggtttgattttta 20000353  T
Q  270 cgcgcgaaaacgt 282  Q
     ||||||||||||    
T  20000352 tgcgcgaaaacgt 20000340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 170 - 287
Target Start/End: Original strand, 17375789 - 17375906
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    |||||||||||||||||||||||||| ||||||||||||||| |  ||||||| ||||||| ||||| ||||| |||   | ||||||| ||| ||||||    
T  17375789 tggttgaaacttgaatttttctgtaggttatgatagagctaaattccaggagcatgtaggcaaaaacgacatcaaaattcgattaacggattgaatttta 17375888  T
Q  270 cgcgcgaaaacgtgaaaa 287  Q
     ||||||||  |||||||    
T  17375889 tgcgcgaaatggtgaaaa 17375906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 170 - 271
Target Start/End: Original strand, 45314400 - 45314500
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    ||||||| ||||||| ||| |||||||||||||||||| ||||| |||||| ||||||||||||||| ||||| ||| | | ||||||||||| ||||||    
T  45314400 tggttgagacttgaaattt-ctgtagattatgatagagttaagtatcaggatcgtgtaggcgaaaacgacatcaaaatccgattaacggtttgaatttta 45314498  T
Q  270 cg 271  Q
    ||    
T  45314499 cg 45314500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 170 - 287
Target Start/End: Original strand, 54363791 - 54363907
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    ||||||||||||||| ||| || ||||||||||||||||||||||||| ||||||||||||||||||  |||| ||| |   ||||||||||| ||||||    
T  54363791 tggttgaaacttgaaattt-ctatagattatgatagagctaagtgtcacgagcgtgtaggcgaaaacggcatcaaaatccaattaacggtttgaatttta 54363889  T
Q  270 cgcgcgaaaacgtgaaaa 287  Q
     |||| |||  |||||||    
T  54363890 tgcgcaaaatggtgaaaa 54363907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 187 - 287
Target Start/End: Original strand, 18293406 - 18293506
Alignment:
Q  187 tttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaa 286  Q
    ||||| ||||||||| |||||  |||||||||||||||||||||||||||  |||| ||| | | ||||||||||| |||||||||||||||  ||||||    
T  18293406 tttctatagattatgttagagtcaagtgtcaggagcgtgtaggcgaaaacggcatcaaaatccgattaacggtttgaattttacgcgcgaaatggtgaaa 18293505  T
Q  287 a 287  Q
    |    
T  18293506 a 18293506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 170 - 287
Target Start/End: Complemental strand, 18168696 - 18168580
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    |||||||||| |||| |||| ||||||||||| |||||  |||||||| ||||||||||||||||||   ||| |||   | ||||||||||||||||||    
T  18168696 tggttgaaacatgaaatttt-tgtagattatgttagagtcaagtgtcaagagcgtgtaggcgaaaacggtatcaaaatttgattaacggtttggatttta 18168598  T
Q  270 cgcgcgaaaacgtgaaaa 287  Q
    |||||||||  |||||||    
T  18168597 cgcgcgaaatggtgaaaa 18168580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 288
Target Start/End: Complemental strand, 3338092 - 3337994
Alignment:
Q  190 ctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 288  Q
    |||||||||| |||||||| |||||||||||||||||| ||||||||  || | ||| | | ||||||||| | |||||||||||||||  ||||||||    
T  3338092 ctgtagattaagatagagccaagtgtcaggagcgtgtaagcgaaaacggcaccaaaatccgattaacggttggaattttacgcgcgaaatggtgaaaat 3337994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 288
Target Start/End: Original strand, 9870777 - 9870875
Alignment:
Q  190 ctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 288  Q
    ||||||||||||||| ||  |||||||||||| ||| ||||||||||  |||| ||| | | ||||||||||| |||||||||||||||  ||||||||    
T  9870777 ctgtagattatgatatagtcaagtgtcaggagagtggaggcgaaaacggcatcaaaatctgattaacggtttgaattttacgcgcgaaatggtgaaaat 9870875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 288
Target Start/End: Complemental strand, 15990989 - 15990891
Alignment:
Q  190 ctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 288  Q
    ||||||||||||||||||| |||||||||||| |||||| |||||||  |||| ||| | | ||||||||| | ||||||||| |||||  ||||||||    
T  15990989 ctgtagattatgatagagccaagtgtcaggagagtgtagccgaaaacggcatcaaaatccgattaacggttggaattttacgcacgaaatggtgaaaat 15990891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 187 - 287
Target Start/End: Original strand, 25119754 - 25119854
Alignment:
Q  187 tttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaa 286  Q
    ||||| ||||||||  |||||  |||||||||||||||||||||||||||  |||| ||| | | ||||||||||  |||||||||||||||  ||||||    
T  25119754 tttctatagattattttagagtcaagtgtcaggagcgtgtaggcgaaaactgcatcaaaatccgattaacggtttaaattttacgcgcgaaatggtgaaa 25119853  T
Q  287 a 287  Q
    |    
T  25119854 a 25119854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 77 - 236
Target Start/End: Original strand, 15272906 - 15273065
Alignment:
Q  77 tttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccattttg-aaaatgagtgtttatgcaaggttctggaaatcgatatttg-ggtggtt 174  Q
    ||||| |||||||| ||||||||| ||||| ||| ||| | |||| ||||| ||||||||||||| ||  ||||| || |||  || ||||| ||| |||    
T  15272906 tttggaagaaaacgggagtttcgtttgaaaattcaattgttaaccgttttggaaaatgagtgtttgtgtgaggtt-tgtaaaatga-atttgaggttgtt 15273003  T
Q  175 gaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaac 236  Q
     ||||| | ||||||||||  |||||||| | ||||||||| |||||| |||||||||||||    
T  15273004 aaaactgggatttttctgtgcattatgatcgtgctaagtgttaggagcatgtaggcgaaaac 15273065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 285
Target Start/End: Original strand, 8574316 - 8574360
Alignment:
Q  241 tcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 285  Q
    ||||||||||||||||||||||  ||||| |||||||||||||||    
T  8574316 tcgaaaacgggttaacggtttgatttttaggcgcgaaaacgtgaa 8574360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 71 - 140
Target Start/End: Original strand, 12837775 - 12837846
Alignment:
Q  71 gagtcgtttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccattttg--aaaatgagtgttt 140  Q
    ||||||||||||||||| || |||||||| |||||| ||| ||| | |||| |||||  |||||||||||||    
T  12837775 gagtcgtttgggagaaatcgggagtttcgggtgaaaattcaattgttaaccgttttggaaaaatgagtgttt 12837846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 135; Significance: 3e-70; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 153 - 323
Target Start/End: Complemental strand, 24267604 - 24267434
Alignment:
Q  153 ggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggt 252  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  24267604 ggaaatcgatgtttggctggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacggcatcgaaaacgggt 24267505  T
Q  253 taacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtcaggcagaaatcg 323  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||  ||||||||||    
T  24267504 taacggtttggattttacgcgcgaaaacgtgaaaattggaaaatctgatgttatctgtcgagcagaaatcg 24267434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 153 - 323
Target Start/End: Original strand, 5110004 - 5110174
Alignment:
Q  153 ggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggt 252  Q
    |||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  5110004 ggaaatcgatttttggttggttgaaacttgagtttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacggcatcgaaaacgggt 5110103  T
Q  253 taacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtcaggcagaaatcg 323  Q
    ||||||||||||||||||||||||||||||||| ||| ||||| ||| |||||||||||  ||||||||||    
T  5110104 taacggtttggattttacgcgcgaaaacgtgaagattagaaaatctgatgttgtctgtcgagcagaaatcg 5110174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 140 - 323
Target Start/End: Original strand, 5289353 - 5289533
Alignment:
Q  140 tatgcaaggttctggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaac 239  Q
    ||||| ||||||||||||||||  |||||||||||||||||||||||   |||||||||||||||||||||||||||||||| | ||||||||||||  |    
T  5289353 tatgcgaggttctggaaatcgagttttgggtggttgaaacttgaatt---ctgtagattatgatagagctaagtgtcaggagtgcgtaggcgaaaacggc 5289449  T
Q  240 atcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtcaggcagaaatcg 323  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||  ||||||||||    
T  5289450 atcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattagaaaatctgatgttgtctgtcgagcagaaatcg 5289533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 153 - 323
Target Start/End: Original strand, 29415846 - 29416018
Alignment:
Q  153 ggaaatcgatatttgggtggttgaaacttgaat--ttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgg 250  Q
    ||||||| || ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||    
T  29415846 ggaaatcaatttttgggtggttgaaacttgaatctttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacgacatcgaaaatgg 29415945  T
Q  251 gttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtcaggcagaaatcg 323  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||| ||| |||||| ||||  ||||||||||    
T  29415946 gttaacggtttggattttatgcgcgaaaacgtgaaaattagaaaatctgatgttgtatgtcgagcagaaatcg 29416018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 123 - 285
Target Start/End: Original strand, 18259436 - 18259598
Alignment:
Q  123 ttttgaaaatgagtgtttatgcaaggttctggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagc 222  Q
    ||||| |||| |||| |||||  ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18259436 ttttgcaaataagtgattatgtgaggttttggaaatcgatttttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagc 18259535  T
Q  223 gtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 285  Q
    || ||||| |||||  ||||||||||||||||||||||||  | ||| | |||||||||||||    
T  18259536 gtttaggcaaaaacggcatcgaaaacgggttaacggtttgattattatgtgcgaaaacgtgaa 18259598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 123 - 285
Target Start/End: Original strand, 8226993 - 8227155
Alignment:
Q  123 ttttgaaaatgagtgtttatgcaaggttctggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagc 222  Q
    ||||| |||| |||| |||||  ||||| |||||| |||| ||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||    
T  8226993 ttttgcaaataagtgattatgtgaggttttggaaaccgatttttgggtggtttaaacttgaatttttctatagattatgatagggctaagtgtcaggagc 8227092  T
Q  223 gtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 285  Q
    || |||||||||||  ||||||||||||||||||||||||| ||||| | |||||||||||||    
T  8227093 gtttaggcgaaaacggcatcgaaaacgggttaacggtttggtttttatgagcgaaaacgtgaa 8227155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 123 - 285
Target Start/End: Original strand, 16448037 - 16448199
Alignment:
Q  123 ttttgaaaatgagtgtttatgcaaggttctggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagc 222  Q
    ||||| ||||||||| |||||  ||||| ||||||||||| |||||||||||||||||  ||||||||| ||| || ||||||||||| |||||||||||    
T  16448037 ttttgcaaatgagtgattatgtgaggttttggaaatcgatttttgggtggttgaaactgtaatttttctttagtttgtgatagagctatgtgtcaggagc 16448136  T
Q  223 gtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 285  Q
    | ||||| ||||||  |||||||||| |||||||||||||  ||||| |||||||||||||||    
T  16448137 gcgtaggtgaaaacggcatcgaaaactggttaacggtttgatttttaggcgcgaaaacgtgaa 16448199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 123 - 285
Target Start/End: Original strand, 23532149 - 23532311
Alignment:
Q  123 ttttgaaaatgagtgtttatgcaaggttctggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagc 222  Q
    ||||| |||| |||| |||||  | ||| |||||| |||| ||||||||||| |||||||| ||||||| ||||||||||||| ||||||||||||| ||    
T  23532149 ttttgcaaataagtgattatgtgaagttttggaaaccgatttttgggtggtttaaacttgattttttctatagattatgatagggctaagtgtcaggtgc 23532248  T
Q  223 gtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 285  Q
    || |||||||||||  ||||||||||||||||||||||||| ||||| | |||||||||||||    
T  23532249 gtttaggcgaaaacggcatcgaaaacgggttaacggtttggtttttatgagcgaaaacgtgaa 23532311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 71 - 236
Target Start/End: Original strand, 31467987 - 31468153
Alignment:
Q  71 gagtcgtttgggagaaaacgagagtttcgtgtgaaacttcgat-tatgaaccattttgaaaatgagtgtttatgcaaggttctggaaatcgatatttggg 169  Q
    |||||||||||||||||||| || |||||  |||||  ||| | | | |||  ||||| |||| |||| |||||  ||||||||||||||||| ||||||    
T  31467987 gagtcgtttgggagaaaacgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagtgattatgtgaggttctggaaatcgatttttggg 31468086  T
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaac 236  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  31468087 tggttgaaacttgaatttttctgtagattatgatagagttaagtgtcaggagcgtgtaggcaaaaac 31468153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 153 - 262
Target Start/End: Complemental strand, 24441418 - 24441309
Alignment:
Q  153 ggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggt 252  Q
    |||||||||| |||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||| |||||  ||||||||||||||    
T  24441418 ggaaatcgatttttgggtggttgaaacttgaatatttttgtagattatgatagggctaagtgtcaggagcgtgtaggcaaaaacggcatcgaaaacgggt 24441319  T
Q  253 taacggtttg 262  Q
    ||||||||||    
T  24441318 taacggtttg 24441309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 71 - 285
Target Start/End: Complemental strand, 25650903 - 25650688
Alignment:
Q  71 gagtcgtttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccattttg-aaaatgagtgtttatgcaaggttctggaaatcgatatttggg 169  Q
    |||||||||||||||||| || |||||||||||||| ||| ||| | |||| ||||| ||||||||||||| || |||||| ||||||  ||  || |||    
T  25650903 gagtcgtttgggagaaaatgaaagtttcgtgtgaaaattcaattgttaaccgttttgtaaaatgagtgtttgtgtaaggttttggaaaatgaagttgggg 25650804  T
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    | ||||||||||||||||||||||| |||| ||||  |||||||||||||| | |||||| ||||||  ||||||||   | ||||| |||||  |||||    
T  25650803 ttgttgaaacttgaatttttctgtacattaagataaggctaagtgtcaggaacatgtaggtgaaaacggcatcgaaattagattaacagtttgattttta 25650704  T
Q  270 cgcgcgaaaacgtgaa 285  Q
     |||||||||||||||    
T  25650703 tgcgcgaaaacgtgaa 25650688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 155 - 285
Target Start/End: Complemental strand, 24563198 - 24563069
Alignment:
Q  155 aaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggtta 254  Q
    |||||||| ||||| | |||||||||| | |||||| ||||||||||||||||||| || ||| ||||||||||||||||||  ||||||||||||||||    
T  24563198 aaatcgatttttgg-tagttgaaactttagtttttcggtagattatgatagagctatgtctcatgagcgtgtaggcgaaaacggcatcgaaaacgggtta 24563100  T
Q  255 acggtttggattttacgcgcgaaaacgtgaa 285  Q
    |||||| || |||||||||||||||||||||    
T  24563099 acggttgggtttttacgcgcgaaaacgtgaa 24563069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 152 - 285
Target Start/End: Original strand, 13750567 - 13750699
Alignment:
Q  152 tggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacggg 251  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||| |||||   |||||||||| |     
T  13750567 tggaaatcgatttttgggtggttgaaacttgaatctttctgtagattatgatagggctaagtgtcaggagcatgtaggtgaaaa-ggcatcgaaaacaga 13750665  T
Q  252 ttaacggtttggattttacgcgcgaaaacgtgaa 285  Q
    ||||| |||||  ||||| |||||||||||||||    
T  13750666 ttaacagtttgatttttatgcgcgaaaacgtgaa 13750699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 77 - 328
Target Start/End: Complemental strand, 26089399 - 26089148
Alignment:
Q  77 tttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccattttg-aaaatgagtgtttatgcaaggttctggaaatcgatatttgggtg-gtt 174  Q
    ||||| |||||||| |||||||| |||||| ||| ||| | |||| ||||| ||||||||||||  || | |||| ||||||  || |||||||   |||    
T  26089399 tttggaagaaaacgggagtttcgggtgaaaattcaattgttaaccgttttggaaaatgagtgttg-tgtagggttttggaaaatga-atttgggaatgtt 26089302  T
Q  175 gaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgc 274  Q
    |||||||||| ||||||| | |||| ||||| ||||||||||| || |  ||||  ||||||| || ||||||||| ||||| |||||| ||||||  ||    
T  26089301 gaaacttgaaattttctgcatattaagatagggctaagtgtcatgaacaagtagaggaaaacagcaccgaaaacggattaacagtttggtttttacatgc 26089202  T
Q  275 gaaaacgtgaaaattggaaaaactgttgttgtctgtcaggcagaaatcgtacta 328  Q
    ||||||||||||||||||||| ||| | ||||||||||||||||||||| ||||    
T  26089201 gaaaacgtgaaaattggaaaatctgatattgtctgtcaggcagaaatcggacta 26089148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 173 - 287
Target Start/End: Complemental strand, 19174907 - 19174794
Alignment:
Q  173 ttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgc 272  Q
    ||||||||||||||||  ||||||||||||||||| ||||||||||||||| |||||||||||| |||| ||||||||||||||  |||| |||||| ||    
T  19174907 ttgaaacttgaatttta-tgtagattatgatagagttaagtgtcaggagcgcgtaggcgaaaacgacattgaaaacgggttaacaatttgaattttatgc 19174809  T
Q  273 gcgaaaacgtgaaaa 287  Q
    ||||||  |||||||    
T  19174808 gcgaaatggtgaaaa 19174794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 172 - 287
Target Start/End: Complemental strand, 16136031 - 16135917
Alignment:
Q  172 gttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacg 271  Q
    |||||||||||||||||  ||||||||||||||||| || ||||||||||||  |||||||||||  ||| |||||||||||||||||||| ||||||||    
T  16136031 gttgaaacttgaatttta-tgtagattatgatagagttatgtgtcaggagcgcataggcgaaaacggcattgaaaacgggttaacggtttgaattttacg 16135933  T
Q  272 cgcgaaaacgtgaaaa 287  Q
    ||| |||  |||||||    
T  16135932 cgcaaaatggtgaaaa 16135917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 153 - 288
Target Start/End: Original strand, 29847569 - 29847703
Alignment:
Q  153 ggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggt 252  Q
    |||||||||| || |||||||||| ||||||| |  | |||||||||||||||||| |||||||||||| |||||||||||||| ||||| ||| | | |    
T  29847569 ggaaatcgattttggggtggttgagacttgaaatagt-tgtagattatgatagagccaagtgtcaggagagtgtaggcgaaaacgacatcaaaatccgat 29847667  T
Q  253 taacggtttggattttacgcgcgaaaacgtgaaaat 288  Q
    |||||||| | |||||||||||||||  ||||||||    
T  29847668 taacggttggaattttacgcgcgaaatggtgaaaat 29847703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 170 - 282
Target Start/End: Complemental strand, 16231620 - 16231509
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    |||||||||| |||| |||| ||||||||||||||| || |||||| |||||| |||||||||||||  |||||||||||| |||||||||||  |||||    
T  16231620 tggttgaaacatgaaatttt-tgtagattatgatagtgccaagtgttaggagcatgtaggcgaaaacggcatcgaaaacggattaacggtttgattttta 16231522  T
Q  270 cgcgcgaaaacgt 282  Q
     ||||||||||||    
T  16231521 tgcgcgaaaacgt 16231509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 170 - 282
Target Start/End: Original strand, 18087350 - 18087461
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    |||||||||| |||| |||| ||||||||||||||| || |||||| |||||| |||||||||||||  |||||||||||| |||||||||||  |||||    
T  18087350 tggttgaaacatgaaatttt-tgtagattatgatagtgccaagtgttaggagcatgtaggcgaaaactgcatcgaaaacggattaacggtttgattttta 18087448  T
Q  270 cgcgcgaaaacgt 282  Q
     ||||||||||||    
T  18087449 tgcgcgaaaacgt 18087461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 77 - 312
Target Start/End: Original strand, 15735346 - 15735580
Alignment:
Q  77 tttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccattttg-aaaatgagtgtttatgcaaggttctggaaatcgatatttg-ggtggtt 174  Q
    |||||||||||||| ||||||||| ||||| |||  || | |||| ||||| ||||||||||||| ||  ||| | || |||  || ||||| ||| |||    
T  15735346 tttgggagaaaacgggagtttcgtttgaaaattcatttgttaaccgttttggaaaatgagtgtttgtgtgaggct-tgtaaaatga-atttgaggttgtt 15735443  T
Q  175 gaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgc 274  Q
    |||| | | ||||||||||  |||||||||| ||||| ||| |||||| |||||| ||||||  |||| ||||||| ||||| |||||  |||||||| |    
T  15735444 gaaattgggatttttctgtgcattatgatagtgctaattgttaggagcatgtaggtgaaaacggcatcaaaaacggattaacagtttgatttttacgcac 15735543  T
Q  275 gaaaacgtgaaaattggaaaaactgttgttgtctgtca 312  Q
    ||||||||| ||||||||||| ||| ||||||||||||    
T  15735544 gaaaacgtg-aaattggaaaatctggtgttgtctgtca 15735580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 77 - 312
Target Start/End: Complemental strand, 23994584 - 23994350
Alignment:
Q  77 tttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccattttgaaaa-tgagtgtttatgcaaggttctggaaatcgatatttg-ggtggtt 174  Q
    ||||| |||||||| ||||||||| ||||| ||| ||| | |||| ||||| ||| ||||||||| ||  ||||| || |||  || ||||| ||| |||    
T  23994584 tttggaagaaaacgggagtttcgtttgaaaattcaattgttaaccgttttggaaagtgagtgtttgtgtgaggtt-tgtaaaatga-atttgaggttgtt 23994487  T
Q  175 gaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgc 274  Q
     ||||| | ||||||||||  |||||||||| ||||||||| |||||| |||||||||||||  |||||||||||| ||||| |||||  ||||| ||||    
T  23994486 aaaactgggatttttctgtgcattatgatagtgctaagtgttaggagcatgtaggcgaaaacggcatcgaaaacggattaacagtttgatttttatgcgc 23994387  T
Q  275 gaaaacgtgaaaattggaaaaactgttgttgtctgtca 312  Q
    |||||||| | || | ||||| ||| ||||||||||||    
T  23994386 gaaaacgt-agaagttgaaaatctgatgttgtctgtca 23994350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 71 - 286
Target Start/End: Complemental strand, 18776824 - 18776608
Alignment:
Q  71 gagtcgtttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccattttg--aaaatgagtgtttatgcaaggttctggaaatcgatatttgg 168  Q
    ||||||||||||||||| || | |||||| |||||| ||| ||| | |||| |||||  ||||||||||||  || |||| | ||||||  || ||||||    
T  18776824 gagtcgtttgggagaaatcgggggtttcgggtgaaaattcaattgttaaccgttttggaaaaatgagtgttg-tgtaaggctttggaaaatga-atttgg 18776727  T
Q  169 gtg-gttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattt 267  Q
    |   ||||||||||||||||||||||| |||| ||||| ||||||||||| || |  ||||| ||||||  |||||||||| | |||||||||||  |||    
T  18776726 gaatgttgaaacttgaatttttctgtacattaagatagggctaagtgtcatgaacacgtaggtgaaaacggcatcgaaaacagattaacggtttgatttt 18776627  T
Q  268 tacgcgcgaaaacgtgaaa 286  Q
    || ||| ||||||||||||    
T  18776626 tatgcgtgaaaacgtgaaa 18776608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 190 - 277
Target Start/End: Complemental strand, 25753159 - 25753072
Alignment:
Q  190 ctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaa 277  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||  |||| ||| | | ||||||||||| ||||||||||||||    
T  25753159 ctgtagattatgatagagccaagtgtcaggagagtgtaggcgaaaacggcatcaaaatccgattaacggtttgcattttacgcgcgaa 25753072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 190 - 277
Target Start/End: Complemental strand, 25755329 - 25755242
Alignment:
Q  190 ctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaa 277  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||  |||| ||| | | ||||||||||| ||||||||||||||    
T  25755329 ctgtagattatgatagagccaagtgtcaggagagtgtaggcgaaaacggcatcaaaatccgattaacggtttgcattttacgcgcgaa 25755242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 170 - 276
Target Start/End: Complemental strand, 28948313 - 28948208
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    ||||||||||||||| ||| ||||||||||||||||||| ||||||||||||| | |||||||||||  |||| ||| | | ||||||||||| | ||||    
T  28948313 tggttgaaacttgaaattt-ctgtagattatgatagagccaagtgtcaggagcatataggcgaaaacggcatcaaaatccgattaacggtttgaacttta 28948215  T
Q  270 cgcgcga 276  Q
    |||||||    
T  28948214 cgcgcga 28948208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 287
Target Start/End: Original strand, 22226166 - 22226387
Alignment:
Q  68 gttgagtcgtttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccatttt-gaaaatgagtgtttatgcaaggttctggaaatcgatattt 166  Q
    ||||||||||||||||||||||| |  ||||||||||||  |||||  | || | |||| |  ||| |||| |||||  ||||| ||||||  ||  |||    
T  22226166 gttgagtcgtttgggagaaaacgggtttttcgtgtgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaatgactttt 22226265  T
Q  167 ggg-tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggat 265  Q
    ||| |||||||||| |||| |||| | ||||||||| |||||  | ||||||||| |||||||| |||||| ||||| ||| | | ||||||||||| ||    
T  22226266 gggatggttgaaacatgaaattttttatagattatgttagagtcatgtgtcaggatcgtgtaggtgaaaacgacatcaaaatccgattaacggtttgcat 22226365  T
Q  266 tttacgcgcgaaaacgtgaaaa 287  Q
    |||||||||||||  |||||||    
T  22226366 tttacgcgcgaaatggtgaaaa 22226387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 170 - 282
Target Start/End: Complemental strand, 23977497 - 23977386
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    |||||||||| |||| |||| |||| |||||||||| || |||||| |||||| |||||||| ||||  |||||||||||| |||||||||||  |||||    
T  23977497 tggttgaaacatgaaatttt-tgtaaattatgatagtgccaagtgttaggagcatgtaggcggaaacggcatcgaaaacggattaacggtttgattttta 23977399  T
Q  270 cgcgcgaaaacgt 282  Q
     ||||||||||||    
T  23977398 tgcgcgaaaacgt 23977386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 153 - 288
Target Start/End: Complemental strand, 18659193 - 18659059
Alignment:
Q  153 ggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggt 252  Q
    |||||||||| || |||||||||| |||| || |  | |||||||||||||||| | |||| ||||||| |||||||||||||| ||||| ||| | | |    
T  18659193 ggaaatcgattttggggtggttgagacttaaaatagt-tgtagattatgatagatccaagtttcaggagagtgtaggcgaaaacgacatcaaaatccgat 18659095  T
Q  253 taacggtttggattttacgcgcgaaaacgtgaaaat 288  Q
    ||||||||||  ||||||||||||||  ||||||||    
T  18659094 taacggtttgacttttacgcgcgaaatggtgaaaat 18659059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 184 - 282
Target Start/End: Original strand, 18003194 - 18003292
Alignment:
Q  184 atttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgt 282  Q
    ||||||||||  |||||||||| ||||||||| |||||| |||||| ||||||  |||||||||||  |||||||||||  ||||| ||||||||||||    
T  18003194 atttttctgtgcattatgatagtgctaagtgtaaggagcatgtaggtgaaaacggcatcgaaaacgaattaacggtttgatttttatgcgcgaaaacgt 18003292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 68 - 287
Target Start/End: Original strand, 33314635 - 33314855
Alignment:
Q  68 gttgagtcgtttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccatttt-gaaaatgagtgtttatgcaaggttctggaaatcgatattt 166  Q
    ||||||||||||||||||||||| |  ||||||||||||  |||||  | || |||||| |  ||| |||| |||||  ||||| ||||||  ||  |||    
T  33314635 gttgagtcgtttgggagaaaacgggtttttcgtgtgaaatgtcgatgtttaagcattttcgccaataagtgcttatgtgaggttttggaaaatgactttt 33314734  T
Q  167 ggg-tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggat 265  Q
    ||| |||||||||| |||| |||| | ||||||||| |||||  ||||||||||| |||||||| ||||||  |||| ||| | | ||||||||||| ||    
T  33314735 gggatggttgaaacatgaaatttt-tatagattatgttagagtcaagtgtcaggatcgtgtaggtgaaaacggcatcaaaatccgattaacggtttgcat 33314833  T
Q  266 tttacgcgcgaaaacgtgaaaa 287  Q
    |||| ||||||||  |||||||    
T  33314834 tttatgcgcgaaatggtgaaaa 33314855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 170 - 278
Target Start/End: Original strand, 19983821 - 19983928
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    |||||||||| |||| ||| || ||||||||| |||||  ||||||| ||||||| ||||||||||| ||||| ||| | | ||||||||||| ||||||    
T  19983821 tggttgaaacatgaaattt-ctatagattatgttagagtcaagtgtccggagcgtataggcgaaaacgacatcaaaatccgattaacggtttgaatttta 19983919  T
Q  270 cgcgcgaaa 278  Q
    |||||||||    
T  19983920 cgcgcgaaa 19983928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 288
Target Start/End: Original strand, 19443363 - 19443461
Alignment:
Q  190 ctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 288  Q
    ||||||||| ||||||||| ||||||||||||  |||||||||||||  |||| ||| | | ||||||||| | |||||||||||||||  ||||||||    
T  19443363 ctgtagattttgatagagccaagtgtcaggagaatgtaggcgaaaacggcatcaaaatccgattaacggttggaattttacgcgcgaaatggtgaaaat 19443461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 68 - 287
Target Start/End: Original strand, 16376801 - 16377021
Alignment:
Q  68 gttgagtcgtttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccatttt-gaaaatgagtgtttatgcaaggttctggaaatcgatattt 166  Q
    ||||||||||||||||||||||| |  ||||||||||||  |||||  | || | |||| |  ||| |||| |||||  ||||| ||||||  ||  |||    
T  16376801 gttgagtcgtttgggagaaaacgggtttttcgtgtgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaatgactttt 16376900  T
Q  167 ggg-tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggat 265  Q
    ||| |||||||||| |||| |||| | ||||||||| |||||  ||||||||||| | |||||| ||||||  |||| ||| | | ||||||||||| ||    
T  16376901 gggatggttgaaacatgaaatttt-tatagattatgttagagtcaagtgtcaggatcatgtaggtgaaaacggcatcaaaatccgattaacggtttgcat 16376999  T
Q  266 tttacgcgcgaaaacgtgaaaa 287  Q
    |||||||||||||  |||||||    
T  16377000 tttacgcgcgaaatggtgaaaa 16377021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 68 - 287
Target Start/End: Original strand, 16384125 - 16384345
Alignment:
Q  68 gttgagtcgtttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccatttt-gaaaatgagtgtttatgcaaggttctggaaatcgatattt 166  Q
    ||||||||||||||||||||||| |  ||||||||||||  |||||  | || | |||| |  ||| |||| |||||  ||||| ||||||  ||  |||    
T  16384125 gttgagtcgtttgggagaaaacgggtttttcgtgtgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaatgactttt 16384224  T
Q  167 ggg-tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggat 265  Q
    ||| |||||||||| |||| |||| | ||||||||| |||||  ||||||||||| | |||||| ||||||  |||| ||| | | ||||||||||| ||    
T  16384225 gggatggttgaaacatgaaatttt-tatagattatgttagagtcaagtgtcaggatcatgtaggtgaaaacggcatcaaaatccgattaacggtttgcat 16384323  T
Q  266 tttacgcgcgaaaacgtgaaaa 287  Q
    |||||||||||||  |||||||    
T  16384324 tttacgcgcgaaatggtgaaaa 16384345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 170 - 287
Target Start/End: Original strand, 16556673 - 16556789
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    |||||||||| |||| |||| | ||||||||| |||||  ||||||||||| |||||||| |||||| ||||| ||| | | ||||||||||| ||||||    
T  16556673 tggttgaaacatgaaatttt-tatagattatgttagagtcaagtgtcaggatcgtgtaggtgaaaacgacatcaaaatccgattaacggtttgcatttta 16556771  T
Q  270 cgcgcgaaaacgtgaaaa 287  Q
    |||| ||||  |||||||    
T  16556772 cgcgtgaaatggtgaaaa 16556789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 170 - 287
Target Start/End: Original strand, 16633229 - 16633345
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    |||||||||| |||| |||| | ||||||||| |||||  ||||||||||| |||||||| |||||| ||||| ||| | | ||||||||||| ||||||    
T  16633229 tggttgaaacatgaaatttt-tatagattatgttagagtcaagtgtcaggatcgtgtaggtgaaaacgacatcaaaatccgattaacggtttgcatttta 16633327  T
Q  270 cgcgcgaaaacgtgaaaa 287  Q
    |||| ||||  |||||||    
T  16633328 cgcgtgaaatggtgaaaa 16633345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 170 - 287
Target Start/End: Original strand, 35015687 - 35015803
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    |||||||||| |||| |||| ||||||||||| |||||  |||||||| |||||| ||||||||||| ||||| ||| | | ||||| ||||| | ||||    
T  35015687 tggttgaaacatgaaatttt-tgtagattatgttagagtcaagtgtcatgagcgtataggcgaaaacgacatcaaaatccgattaacagtttgaaattta 35015785  T
Q  270 cgcgcgaaaacgtgaaaa 287  Q
    |||||||||  |||||||    
T  35015786 cgcgcgaaatggtgaaaa 35015803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 170 - 222
Target Start/End: Original strand, 7366138 - 7366190
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagc 222  Q
    |||||||||||||||||| |||||| | |||||||||||||||||||||||||    
T  7366138 tggttgaaacttgaatttctctgtaaaatatgatagagctaagtgtcaggagc 7366190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 77 - 279
Target Start/End: Original strand, 13621227 - 13621429
Alignment:
Q  77 tttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccattttg-aaaatgagtgtttatgcaaggttctggaaatcgatatttg-ggtggtt 174  Q
    |||||||||||||| ||||||||| ||||| |||  || | |||| ||||| ||||||||||||| ||  ||| | || |||  || ||||| ||| |||    
T  13621227 tttgggagaaaacgggagtttcgtttgaaaattcatttgttaaccgttttggaaaatgagtgtttgtgtgaggct-tgtaaaatga-atttgaggttgtt 13621324  T
Q  175 gaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgc 274  Q
    |||| | | ||||||||||  |||||||||| ||||| ||| |||||| |||||| ||||||  |||||||||||| |||||||||||  ||||| ||||    
T  13621325 gaaattgggatttttctgtgcattatgatagtgctaattgttaggagcatgtaggtgaaaacggcatcgaaaacggattaacggtttgatttttatgcgc 13621424  T
Q  275 gaaaa 279  Q
     ||||    
T  13621425 aaaaa 13621429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 190 - 288
Target Start/End: Original strand, 16132753 - 16132850
Alignment:
Q  190 ctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 288  Q
    ||||||||||||||||||| ||||||||| || |||| |||||||||  |||| ||| | | ||||||| ||||| |||||||||||||  ||||||||    
T  16132753 ctgtagattatgatagagccaagtgtcagaagagtgtgggcgaaaacggcatcaaaatccgattaacgg-ttggaatttacgcgcgaaatggtgaaaat 16132850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 190 - 236
Target Start/End: Complemental strand, 25348077 - 25348031
Alignment:
Q  190 ctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaac 236  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||    
T  25348077 ctgtagattaagatagagccaagtgtcaggagcgtgtaggcgaaaac 25348031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 287
Target Start/End: Complemental strand, 10488423 - 10488307
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    |||||||||| |||| |||| | ||||||||| |||||  ||||||||||| | |||||| ||||||  |||| ||| | | ||||||||||| ||||||    
T  10488423 tggttgaaacatgaaatttt-tatagattatgttagagtcaagtgtcaggatcatgtaggtgaaaacggcatcaaaatccgattaacggtttgcatttta 10488325  T
Q  270 cgcgcgaaaacgtgaaaa 287  Q
    |||||||||  |||||||    
T  10488324 cgcgcgaaatggtgaaaa 10488307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 287
Target Start/End: Original strand, 16649903 - 16650019
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    |||||||||| |||| |||| | ||||||||| |||||  ||||||||||  |||||||| ||||||  |||| ||| | | ||||||||||| ||||||    
T  16649903 tggttgaaacatgaaatttt-tatagattatgttagagtcaagtgtcagggtcgtgtaggtgaaaacggcatcaaaatccgattaacggtttgcatttta 16650001  T
Q  270 cgcgcgaaaacgtgaaaa 287  Q
    |||||||||  |||||||    
T  16650002 cgcgcgaaatggtgaaaa 16650019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 123 - 189
Target Start/End: Original strand, 19102745 - 19102811
Alignment:
Q  123 ttttgaaaatgagtgtttatgcaaggttctggaaatcgatatttgggtggttgaaacttgaattttt 189  Q
    ||||| ||||||||| |||||  ||||| |||||| |||| ||||||||||||||||| ||||||||    
T  19102745 ttttgcaaatgagtgattatgtgaggttttggaaaccgatttttgggtggttgaaactggaattttt 19102811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 170 - 287
Target Start/End: Complemental strand, 25904869 - 25904753
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    |||||||||| |||| |||| | ||||||||| |||||  |||||||| || |||||||| ||||||  |||| ||| | | |||| |||||| ||||||    
T  25904869 tggttgaaacatgaaatttt-tatagattatgttagagtcaagtgtcaagatcgtgtaggtgaaaacggcatcaaaatccgattaatggtttgcatttta 25904771  T
Q  270 cgcgcgaaaacgtgaaaa 287  Q
    |||||||||  |||||||    
T  25904770 cgcgcgaaatggtgaaaa 25904753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 328
Target Start/End: Original strand, 31468149 - 31468201
Alignment:
Q  276 aaaacgtgaaaattggaaaaactgttgttgtctgtcaggcagaaatcgtacta 328  Q
    ||||||||||||||||||||  || |||||||||| |||||||||||| ||||    
T  31468149 aaaacgtgaaaattggaaaatttgatgttgtctgttaggcagaaatcggacta 31468201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 135; Significance: 3e-70; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 146 - 328
Target Start/End: Complemental strand, 20058249 - 20058067
Alignment:
Q  146 aggttctggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaa 245  Q
    |||||||||||| |||| |||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||||  |||||||    
T  20058249 aggttctggaaaccgatttttgggtggttgaaacttgattttttttgtagattatgatagagctaactgtcaggagcgtgtaggcgaaaacggcatcgaa 20058150  T
Q  246 aacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtcaggcagaaatcgtacta 328  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||    
T  20058149 aacgggttaatggtttggattttacgcacgaaaacgtgaaaattggaaaatctgatgttgtctgtcaggcagaaatcggacta 20058067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 123 - 328
Target Start/End: Original strand, 7320858 - 7321062
Alignment:
Q  123 ttttgaaaatgagtgtttatgcaaggttctggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagc 222  Q
    ||||| |||| |||| |||||  ||||||||||||||||| ||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  7320858 ttttgcaaataagtgattatgtgaggttctggaaatcgatttttgggtggttaaaacttgaatttt-ctgcagattatgatagagctaagtgtcaggagc 7320956  T
Q  223 gtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtcaggcagaaatc 322  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |  ||||||||||| ||| |||||||||||||||| |||||    
T  7320957 gtgtaggcgaaaacgacatcgaaaacggattaacggtttggattttacgcgcgaaaacattgaaattggaaaatctgatgttgtctgtcaggcaaaaatc 7321056  T
Q  323 gtacta 328  Q
    | ||||    
T  7321057 ggacta 7321062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 146 - 323
Target Start/End: Original strand, 13527996 - 13528173
Alignment:
Q  146 aggttctggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaa 245  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||    
T  13527996 aggttttggaaatcgatttttgggtggttgaaacttgaatttttctgtagattatgataaggctaagtgtcaggagcgtgtaggcgaaaacgacatcgaa 13528095  T
Q  246 aacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtcaggcagaaatcg 323  Q
    || |||||||||||||||||||||||||||||||||||||| || ||||| ||| |||||||||||  ||||||||||    
T  13528096 aatgggttaacggtttggattttacgcgcgaaaacgtgaaagttagaaaatctgatgttgtctgtcgagcagaaatcg 13528173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 153 - 323
Target Start/End: Complemental strand, 18271083 - 18270913
Alignment:
Q  153 ggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggt 252  Q
    |||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||    
T  18271083 ggaaatcgatttttgggtggttgaaacttgaatctttttgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacggcatcgaaaacaggt 18270984  T
Q  253 taacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtcaggcagaaatcg 323  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||  ||||||||||    
T  18270983 taacggtttggattttacgcgcgaaaacgtgaaaattagaaaatctgatgttgtctgtcgagcagaaatcg 18270913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 153 - 323
Target Start/End: Complemental strand, 18275737 - 18275567
Alignment:
Q  153 ggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggt 252  Q
    |||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||    
T  18275737 ggaaatcgatttttgggtggttgaaacttgaatctttttgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacggcatcgaaaacaggt 18275638  T
Q  253 taacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtcaggcagaaatcg 323  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||  ||||||||||    
T  18275637 taacggtttggattttacgcgcgaaaacgtgaaaattagaaaatctgatgttgtctgtcgagcagaaatcg 18275567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 14 - 143
Target Start/End: Original strand, 18853057 - 18853186
Alignment:
Q  14 ttttgggtgagttagacaaattgaattttttgttttgacgttaagaaaatggttgttgagtcgtttgggagaaaacgagagtttcgtgtgaaacttcgat 113  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  18853057 ttttgggtgagttagacaaattgaattttctgttttgatgttaagaaaatggttgttgagccgtttgggagaaaacgagagtttcgtgtgaaacttcgat 18853156  T
Q  114 tatgaaccattttgaaaatgagtgtttatg 143  Q
    | ||||||||||||||||||||||||||||    
T  18853157 tgtgaaccattttgaaaatgagtgtttatg 18853186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 153 - 285
Target Start/End: Complemental strand, 18824378 - 18824246
Alignment:
Q  153 ggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggt 252  Q
    ||||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||    
T  18824378 ggaaatcaatttttaggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaatggcatcgaaaacgggt 18824279  T
Q  253 taacggtttggattttacgcgcgaaaacgtgaa 285  Q
    ||||||||||  ||||| | |||||||||||||    
T  18824278 taacggtttgatttttatgtgcgaaaacgtgaa 18824246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 153 - 262
Target Start/End: Complemental strand, 21473550 - 21473441
Alignment:
Q  153 ggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggt 252  Q
    |||||||||| |||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||    
T  21473550 ggaaatcgatttttgggtggttgaaacttgaatctttttgtagattatgatagggctaagtgtcaggagcgtgtaggcgaaaacggcatcgaaaacgggt 21473451  T
Q  253 taacggtttg 262  Q
    ||||||||||    
T  21473450 taacggtttg 21473441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 153 - 285
Target Start/End: Complemental strand, 52983984 - 52983852
Alignment:
Q  153 ggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggt 252  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||||||| ||||||| |||||| | |||||| ||||||  |||||||||| | |    
T  52983984 ggaaatcgatttttgggtggttgaaacttgaatatttctgtagattatgatagggctaagtttcaggaacatgtaggtgaaaacggcatcgaaaacagat 52983885  T
Q  253 taacggtttggattttacgcgcgaaaacgtgaa 285  Q
    ||||||||||  ||||| |||| ||||||||||    
T  52983884 taacggtttgatttttatgcgcaaaaacgtgaa 52983852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 164 - 284
Target Start/End: Complemental strand, 51476738 - 51476618
Alignment:
Q  164 tttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttgg 263  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| | |||||| ||||||  |||||||||| | |||||||||||     
T  51476738 tttgggtggttgaaacttgaatttttctgtagattatgatagggctaagtttcaggaacatgtaggtgaaaacggcatcgaaaacagattaacggtttga 51476639  T
Q  264 attttacgcgcgaaaacgtga 284  Q
     ||||| | ||||||||||||    
T  51476638 tttttatgagcgaaaacgtga 51476618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 170 - 288
Target Start/End: Complemental strand, 51324244 - 51324127
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    ||||||| ||||||| ||| ||||||||||||||||||| ||||||||||||| ||||||||||||| ||||| ||| | | ||||||||||| ||||||    
T  51324244 tggttgagacttgaaattt-ctgtagattatgatagagccaagtgtcaggagcatgtaggcgaaaacgacatcaaaatccgattaacggtttgaatttta 51324146  T
Q  270 cgcgcgaaaacgtgaaaat 288  Q
    |||||||||  ||||||||    
T  51324145 cgcgcgaaatggtgaaaat 51324127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 184 - 312
Target Start/End: Original strand, 20825451 - 20825578
Alignment:
Q  184 atttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtg 283  Q
    ||||||||||  |||||||||| ||||||||| |||||| ||||||||||||| ||||||||||||| |||||||||||  ||||| ||||||||||||     
T  20825451 atttttctgtgcattatgatagtgctaagtgttaggagcatgtaggcgaaaacgacatcgaaaacggattaacggtttgatttttatgcgcgaaaacgt- 20825549  T
Q  284 aaaattggaaaaactgttgttgtctgtca 312  Q
    | || | ||||| ||| ||||||||||||    
T  20825550 agaagttgaaaatctgatgttgtctgtca 20825578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 187 - 278
Target Start/End: Complemental strand, 39061068 - 39060977
Alignment:
Q  187 tttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaa 278  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||| | | ||||| ||||| |||||||||||||||    
T  39061068 tttctgtagattatgatagagttaagtgtcaggagcgtgtaggcgaaaacgacatcaaaatctgattaacagtttgaattttacgcgcgaaa 39060977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 188 - 288
Target Start/End: Original strand, 21239374 - 21239474
Alignment:
Q  188 ttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 287  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||  |||| ||| | | ||||||||||| |||||||||||||||  |||||||    
T  21239374 ttctgtagattatgatagagccaagtgtcaggagcgtgtaggcaaaaacggcatcaaaatccgattaacggtttgaattttacgcgcgaaatggtgaaaa 21239473  T
Q  288 t 288  Q
    |    
T  21239474 t 21239474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 71 - 285
Target Start/End: Original strand, 27330330 - 27330545
Alignment:
Q  71 gagtcgtttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccattttg--aaaatgagtgtttatgcaaggttctggaaatcgatatttgg 168  Q
    ||||||||||||||||| |||| |||||| |||||| ||| ||| | || |||||||  ||||||||||||  || |||| | ||||||  || ||||||    
T  27330330 gagtcgtttgggagaaatcgagggtttcgggtgaaaattcaattgttaatcattttggaaaaatgagtgttg-tgtaaggctgtggaaaatga-atttgg 27330427  T
Q  169 gtg-gttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattt 267  Q
    |   ||||||||||||||||||||||| |||| ||||| ||||||||||| || |  ||||| ||||||   ||||||||||| ||||| |||||  |||    
T  27330428 gaatgttgaaacttgaatttttctgtacattaagatagggctaagtgtcatgaacacgtaggtgaaaacggtatcgaaaacggattaacagtttgatttt 27330527  T
Q  268 tacgcgcgaaaacgtgaa 285  Q
    || |||||||||||||||    
T  27330528 tatgcgcgaaaacgtgaa 27330545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 170 - 287
Target Start/End: Complemental strand, 21859017 - 21858901
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    |||||||||  |||| |||| ||||||||||| |||||  ||||||||||||||||||||||||||| ||||| ||| | | ||||||||||| ||||||    
T  21859017 tggttgaaaaatgaaatttt-tgtagattatgttagagtcaagtgtcaggagcgtgtaggcgaaaacgacatcaaaatccgattaacggtttgaatttta 21858919  T
Q  270 cgcgcgaaaacgtgaaaa 287  Q
    |||||||||  |||||||    
T  21858918 cgcgcgaaatggtgaaaa 21858901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 170 - 282
Target Start/End: Complemental strand, 17148296 - 17148185
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    |||||||||| |||| |||| ||||||||||||||| || |||||| |||||| |||||||||||||  |||||||||||| |||||| ||||  |||||    
T  17148296 tggttgaaacatgaaatttt-tgtagattatgatagtgccaagtgttaggagcatgtaggcgaaaactgcatcgaaaacggattaacgatttgattttta 17148198  T
Q  270 cgcgcgaaaacgt 282  Q
     ||||||||||||    
T  17148197 tgcgcgaaaacgt 17148185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 287
Target Start/End: Original strand, 44035399 - 44035619
Alignment:
Q  68 gttgagtcgtttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccatttt-gaaaatgagtgtttatgcaaggttctggaaatcgatattt 166  Q
    |||||||||||||||||||||||||  ||||||||||||  |||||  | || | |||| |  ||| |||| |||||  ||||| |||||   ||  |||    
T  44035399 gttgagtcgtttgggagaaaacgagtttttcgtgtgaaatatcgatgtttaagcgttttcgtcaataagtgattatgtgaggttttggaatatgactttt 44035498  T
Q  167 ggg-tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggat 265  Q
    ||| |||||||||| ||||  ||| ||||||||||| |||||  |||||||||||||||||||| |||||| ||||| ||| | | ||| ||||||| ||    
T  44035499 gggatggttgaaacatgaaaattt-tgtagattatgttagagtcaagtgtcaggagcgtgtaggtgaaaacgacatcaaaatccgattagcggtttgaat 44035597  T
Q  266 tttacgcgcgaaaacgtgaaaa 287  Q
    |||||||||||||  |||||||    
T  44035598 tttacgcgcgaaatggtgaaaa 44035619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 190 - 288
Target Start/End: Complemental strand, 21660094 - 21659996
Alignment:
Q  190 ctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 288  Q
    ||||||||||||||||||| ||||| |||||| |||||||||||||| ||||| |||   | ||||||||| | |||||||||||||||  ||||||||    
T  21660094 ctgtagattatgatagagccaagtgccaggagagtgtaggcgaaaacgacatcaaaattcgattaacggttggaattttacgcgcgaaatggtgaaaat 21659996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 287
Target Start/End: Complemental strand, 16656371 - 16656271
Alignment:
Q  187 tttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaa 286  Q
    ||||||||||||| | |||||  |||||||| |||||||||||||||||| |||||  || | | ||||||||||| |||||||||||||||  ||||||    
T  16656371 tttctgtagattaagttagagtcaagtgtcatgagcgtgtaggcgaaaacgacatcataatccgattaacggtttgaattttacgcgcgaaatggtgaaa 16656272  T
Q  287 a 287  Q
    |    
T  16656271 a 16656271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 170 - 287
Target Start/End: Original strand, 18060290 - 18060406
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    |||||||||| |||| |||| | ||||||||| |||||  ||||||||||| |||||||| ||||||  |||| ||| | | ||||||||||| ||||||    
T  18060290 tggttgaaacatgaaatttt-tatagattatgttagagtcaagtgtcaggatcgtgtaggtgaaaacggcatcaaaatccgattaacggtttgcatttta 18060388  T
Q  270 cgcgcgaaaacgtgaaaa 287  Q
    |||||||||  |||||||    
T  18060389 cgcgcgaaatggtgaaaa 18060406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 71 - 280
Target Start/End: Complemental strand, 35054449 - 35054239
Alignment:
Q  71 gagtcgtttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccattttg--aaaatgagtgtttatgcaaggttctggaaatcgatatttgg 168  Q
    ||||||||||||||||| |||| |||||  |||||| ||| ||| | |||| |||||  ||||||||||||  || |||| | ||||||  || ||||||    
T  35054449 gagtcgtttgggagaaatcgagggtttcaggtgaaaattcaattgttaaccgttttggaaaaatgagtgttg-tgtaaggctttggaaaatga-atttgg 35054352  T
Q  169 gtg-gttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattt 267  Q
    |   |||||||||||||||||||| || |||| ||||| |||| |||||  || |  ||||| ||||||  |||||||||||| |||||||||||  |||    
T  35054351 gaatgttgaaacttgaatttttctttacattaagatagggctaggtgtcttgaacacgtaggtgaaaacggcatcgaaaacggattaacggtttgatttt 35054252  T
Q  268 tacgcgcgaaaac 280  Q
    || ||||||||||    
T  35054251 tatgcgcgaaaac 35054239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 287
Target Start/End: Complemental strand, 17004359 - 17004245
Alignment:
Q  172 gttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacg 271  Q
    |||||||| |||| |||| | ||||||||| |||||  ||||||||||| |||||||| ||||||  |||| ||| | | ||||||||||| ||||||||    
T  17004359 gttgaaacatgaaatttt-tatagattatgttagagtcaagtgtcaggatcgtgtaggtgaaaacggcatcaaaatccgattaacggtttgcattttacg 17004261  T
Q  272 cgcgaaaacgtgaaaa 287  Q
    |||||||  |||||||    
T  17004260 cgcgaaatggtgaaaa 17004245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 190 - 236
Target Start/End: Original strand, 7791888 - 7791934
Alignment:
Q  190 ctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaac 236  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||    
T  7791888 ctgtagattaagatagagccaagtgtcaggagcgtgtaggcgaaaac 7791934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 190 - 236
Target Start/End: Original strand, 20030972 - 20031018
Alignment:
Q  190 ctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaac 236  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||    
T  20030972 ctgtagattaagatagagccaagtgtcaggagcgtgtaggcgaaaac 20031018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 287
Target Start/End: Original strand, 38055518 - 38055738
Alignment:
Q  68 gttgagtcgtttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccatttt-gaaaatgagtgtttatgcaaggttctggaaatcgatattt 166  Q
    ||||||||||||||||||||||| |  ||||||||||||  |||||  | || | |||| |  ||| |||| |||||  ||||| ||||||  ||  |||    
T  38055518 gttgagtcgtttgggagaaaacgggtttttcgtgtgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaatgactttt 38055617  T
Q  167 ggg-tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggat 265  Q
    ||| |||||||||| |||| |||| | ||||||||| |||||  |||||||| || | |||||| ||||||  |||| ||| | | ||||||||||| ||    
T  38055618 gggatggttgaaacatgaaatttt-tatagattatgttagagtcaagtgtcaagatcatgtaggtgaaaacggcatcaaaatccgattaacggtttgcat 38055716  T
Q  266 tttacgcgcgaaaacgtgaaaa 287  Q
    |||||||||||||  |||||||    
T  38055717 tttacgcgcgaaatggtgaaaa 38055738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 205 - 288
Target Start/End: Original strand, 7791949 - 7792032
Alignment:
Q  205 gagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 288  Q
    |||| |||||||||||||||||||||||||||  || | ||| | | ||||||||| | |||||||||||||||  ||||||||    
T  7791949 gagccaagtgtcaggagcgtgtaggcgaaaacggcaccaaaatccgattaacggttggaattttacgcgcgaaatggtgaaaat 7792032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 236
Target Start/End: Original strand, 21650572 - 21650637
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaac 236  Q
    |||||||||| |||| |||| ||||||||| | |||||  |||||| ||||||||||||||||||||    
T  21650572 tggttgaaacatgaaatttt-tgtagattacgttagagtcaagtgtgaggagcgtgtaggcgaaaac 21650637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1276 (Bit Score: 132; Significance: 2e-68; HSPs: 1)
Name: scaffold1276
Description:

Target: scaffold1276; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 124 - 323
Target Start/End: Complemental strand, 928 - 729
Alignment:
Q  124 tttgaaaatgagtgtttatgcaaggttctggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcg 223  Q
    |||| |||| |||| |||||  |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  928 tttgcaaataagtgattatgtgaggttctggaaatcgattgttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcg 829  T
Q  224 tgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtcaggcagaaatcg 323  Q
    ||||||||||||| |||||||||||||| || |||||||| |||||||||| |||||||||||||| |||||  || |||||||||||| ||||||||||    
T  828 tgtaggcgaaaacgacatcgaaaacgggctagcggtttggcttttacgcgcaaaaacgtgaaaattagaaaatttgatgttgtctgtcaagcagaaatcg 729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 130; Significance: 3e-67; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 14 - 267
Target Start/End: Complemental strand, 432357 - 432105
Alignment:
Q  14 ttttgggtgagttagacaaattgaattttttgttttgacgttaagaaaatggttgttgagtcgtttgggagaaaacgagagtttcgtgtgaaacttcgat 113  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  432357 ttttgggtgagttagacaaattgaattttatgttttgacgttaagaaaatggttgttgagtcgtttgggagaaaacgagagtttcgtgtgaaacttcgat 432258  T
Q  114 tatgaaccattttgaaaatgagtgtttatgcaaggttctggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagt 213  Q
    | ||||||||||||||||||||||||| ||  | |||  || ||||  | || || |||||| ||| ||||||||| ||| || || |||||||||||||    
T  432257 tgtgaaccattttgaaaatgagtgtttgtgtgatgtttgggcaatctgttttgggatggttggaacatgaattttt-tgtggaataagatagagctaagt 432159  T
Q  214 gtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattt 267  Q
    || |||| || |||| |||||||   ||||||  ||| ||||||||||||||||    
T  432158 gtaaggaacgcgtagacgaaaacggaatcgaagtcggattaacggtttggattt 432105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 146 - 323
Target Start/End: Complemental strand, 10817576 - 10817399
Alignment:
Q  146 aggttctggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaa 245  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||   |||||||    
T  10817576 aggttctggaaatcgatttttgggtggttgaaacttgaatttttctatagattatgatagagctaagtgtcaggagcgtgtaggcgaaaagggcatcgaa 10817477  T
Q  246 aacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtcaggcagaaatcg 323  Q
    || ||||||||||||||||||||||||| ||||||||||| ||| ||||| ||| ||||||||||| |||||||||||    
T  10817476 aatgggttaacggtttggattttacgcgtgaaaacgtgaagattagaaaatctgatgttgtctgtcgggcagaaatcg 10817399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 123 - 323
Target Start/End: Original strand, 22357163 - 22357362
Alignment:
Q  123 ttttgaaaatgagtgtttatgcaaggttctggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagc 222  Q
    ||||| |||| |||| |||||  ||||||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||| ||||||||||||||    
T  22357163 ttttgcaaataagtgattatgtgaggttctggaaatcgatttttgggtggttgaaacttgaatttttctgtagaat-tgatagagttaagtgtcaggagc 22357261  T
Q  223 gtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtcaggcagaaatc 322  Q
    ||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||  |||||||||    
T  22357262 gtgtaggcgaaaacggcatcgaaaacgagttaacggtttggattttacgcgcgaaaacgtgaaaattagaaaatctgatgttgtctgtcgagcagaaatc 22357361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 71 - 293
Target Start/End: Original strand, 21297566 - 21297789
Alignment:
Q  71 gagtcgtttgggagaaaacgagagtttcgtgtgaaacttcgat-tatgaaccattttgaaaatgagtgtttatgcaaggttctggaaatcgatatttggg 169  Q
    |||||||||||||||||||| || |||||  |||||  ||| | | | |||  ||||| |||| |||| ||||| |||||||||||||||||| ||||||    
T  21297566 gagtcgtttgggagaaaacgggattttcgcttgaaaagtcgctgtctaaacgtttttgcaaataagtgattatgtaaggttctggaaatcgatttttggg 21297665  T
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  21297666 tggttgaaactttaatttttctggagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacgacatcgaaaacgggttaacagtttggatttta 21297765  T
Q  270 cgcgcgaaaacgtgaaaattggaa 293  Q
     |||||||||| ||||||||||||    
T  21297766 tgcgcgaaaacatgaaaattggaa 21297789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 7 - 267
Target Start/End: Original strand, 23981860 - 23982120
Alignment:
Q  7 tttggtgt-tttgggtgagttagacaaattgaattttttgttttgacgttaagaaaatggttgttgagtcgtttgggagaaaacgagagtttcgtgtgaa 105  Q
    |||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23981860 tttggtgtatttgggtgagttagacaaattgaattttctattttgacgttaagaaaatggttgttgagtcgtttgggagaaaacgagagtttcgtgtgaa 23981959  T
Q  106 acttcgattatgaaccattttgaaaatgagtgtttatgcaaggttctggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatag 205  Q
    ||||||||||||||||||||||||||||||||||||||  |||||  || |||   |  | || |||||| ||| |||| |||||||| || || |||||    
T  23981960 acttcgattatgaaccattttgaaaatgagtgtttatgtgaggtttgggcaattttttgtgggatggttggaacatgaa-ttttctgtggaataagatag 23982058  T
Q  206 agctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattt 267  Q
    |||||||||| |||| || |||| |||||||   |||||||  || ||||||||||| ||||    
T  23982059 agctaagtgtaaggatcgcgtagacgaaaacggaatcgaaattggattaacggtttgaattt 23982120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 123 - 323
Target Start/End: Complemental strand, 23539555 - 23539355
Alignment:
Q  123 ttttgaaaatgagtgtttatgcaaggttctggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagc 222  Q
    ||||| |||| |||| |||||  |||||||||||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  23539555 ttttgcaaataagtgattatgtgaggttctggaaatcaatttttgggtggttgaaacttgaatttatctgtagattatgatagagctaagtgtcaggagc 23539456  T
Q  223 gtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtcaggcagaaatc 322  Q
    ||||||||||||||  ||||||||| ||| |||||||||||||||||||||| |||||||| | ||| ||||| ||| |||||||||||  |||||||||    
T  23539455 gtgtaggcgaaaacggcatcgaaaatgggataacggtttggattttacgcgcaaaaacgtgtagattagaaaatctgatgttgtctgtcgagcagaaatc 23539356  T
Q  323 g 323  Q
    |    
T  23539355 g 23539355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 123 - 293
Target Start/End: Original strand, 21311162 - 21311332
Alignment:
Q  123 ttttgaaaatgagtgtttatgcaaggttctggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagc 222  Q
    ||||| |||| |||| |||||  ||||||||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  21311162 ttttgcaaataagtgattatgtgaggttctggaaatcgatttttgggtggtcgaaactttaatttttctgtagattatgatagagctaagtgtcaggagc 21311261  T
Q  223 gtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaa 293  Q
    || |||||||||||  ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  21311262 gtataggcgaaaacggcatcgaaaacgggttaacggtttggattttatgcgcgaaaacatgaaaattggaa 21311332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 153 - 311
Target Start/End: Original strand, 8952330 - 8952487
Alignment:
Q  153 ggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggt 252  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  8952330 ggaaatcgatttttaggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacggcatcgaaaacgggt 8952429  T
Q  253 taacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtc 311  Q
    ||||||||||| ||||| |||||||||||||||  |||| ||| ||| |||||||||||    
T  8952430 taacggtttggtttttatgcgcgaaaacgtgaaggttgg-aaatctgatgttgtctgtc 8952487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 153 - 306
Target Start/End: Original strand, 22777359 - 22777512
Alignment:
Q  153 ggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggt 252  Q
    |||||||||| |||||| ||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||  |||||||||||||     
T  22777359 ggaaatcgatttttgggcggttgaaacttgaatctttctgtagattatgatagagttaagtgtcatgagcgtgtaggcgaaaacggcatcgaaaacggga 22777458  T
Q  253 taacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgt 306  Q
    |||| ||||| |||||| ||||||||||||||||||| ||||| ||| ||||||    
T  22777459 taacagtttgaattttatgcgcgaaaacgtgaaaattagaaaatctgatgttgt 22777512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 123 - 285
Target Start/End: Complemental strand, 40726479 - 40726317
Alignment:
Q  123 ttttgaaaatgagtgtttatgcaaggttctggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagc 222  Q
    ||||| |||| |||| |||||  ||||| |||||| |||| ||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||    
T  40726479 ttttgcaaataagtgattatgtgaggttttggaaaccgatttttgggtggtttaaacttgaatttttctatagattatgatagggctaagtgtcaggagc 40726380  T
Q  223 gtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 285  Q
    || |||||||||||  ||||||||||||||||||||||||| ||||| | |||||||||||||    
T  40726379 gtttaggcgaaaacggcatcgaaaacgggttaacggtttggtttttatgagcgaaaacgtgaa 40726317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 123 - 285
Target Start/End: Original strand, 18318467 - 18318629
Alignment:
Q  123 ttttgaaaatgagtgtttatgcaaggttctggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagc 222  Q
    ||||| ||||||||| |||||  ||||| |||||| |||| ||||||||||||||||| |||||||||  |||||| |||||||||||||||||||||||    
T  18318467 ttttgcaaatgagtgattatgtgaggttttggaaaccgatttttgggtggttgaaactggaatttttccttagattgtgatagagctaagtgtcaggagc 18318566  T
Q  223 gtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 285  Q
    | ||||||||||||  |||||||||| |||||||||||||  ||||| |||||||||||||||    
T  18318567 gcgtaggcgaaaacggcatcgaaaacaggttaacggtttgatttttaggcgcgaaaacgtgaa 18318629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 123 - 285
Target Start/End: Original strand, 20765516 - 20765678
Alignment:
Q  123 ttttgaaaatgagtgtttatgcaaggttctggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagc 222  Q
    ||||| ||||||||| |||||  ||||| |||||| | || ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  20765516 ttttgcaaatgagtgattatgtgaggttttggaaacctatttttgggtggttgaaactggaatttttctgtagattgtgatagagctaagtgtcaggagc 20765615  T
Q  223 gtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 285  Q
    | ||||||||||||  ||||||||| ||||||||||||||  ||||| ||| |||||||||||    
T  20765616 gcgtaggcgaaaacggcatcgaaaaggggttaacggtttgatttttaggcgtgaaaacgtgaa 20765678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 186 - 328
Target Start/End: Original strand, 21405932 - 21406074
Alignment:
Q  186 ttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 285  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||| | || ||||||||||||||  ||| |||| |||||||||||||||||     
T  21405932 ttttatgtagattatgatagagctaagtgtcaggagtgtgtaggcgaaaacgaaattgaaaacgggttaacaatttagattctacgcgcgaaaacgtgac 21406031  T
Q  286 aattggaaaaactgttgttgtctgtcaggcagaaatcgtacta 328  Q
    |||||||||| ||| |||||||||||||| |||||||| ||||    
T  21406032 aattggaaaatctgatgttgtctgtcagggagaaatcggacta 21406074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 71 - 285
Target Start/End: Complemental strand, 21109564 - 21109349
Alignment:
Q  71 gagtcgtttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccattttg-aaaatgagtgtttatgcaaggttctggaaatcgatatttggg 169  Q
    ||||||||||||||||||||  |||||| ||||||| ||| ||| | |||| ||||| ||||||||||||| ||  ||||| ||||||  ||  || |||    
T  21109564 gagtcgtttgggagaaaacggaagtttcatgtgaaaattcaattgttaaccgttttggaaaatgagtgtttgtgtgaggttttggaaaatgaatttgggg 21109465  T
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    | |||||||||| |||||||||||| ||| |||||| |||||||||||||| | |||||| |||||| ||||||||||| | |||||||||||   ||||    
T  21109464 ttgttgaaacttcaatttttctgtacattgtgatagggctaagtgtcaggaacatgtaggtgaaaacgacatcgaaaacagattaacggtttgatattta 21109365  T
Q  270 cgcgcgaaaacgtgaa 285  Q
     |||||||||||||||    
T  21109364 tgcgcgaaaacgtgaa 21109349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 153 - 285
Target Start/End: Original strand, 22007179 - 22007310
Alignment:
Q  153 ggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggt 252  Q
    |||||||||| ||||| | |||||||||||| |||||| |||||||||||||| |||| || ||| ||||||||||||||||||  ||||||||||||||    
T  22007179 ggaaatcgatttttgg-tagttgaaacttgagtttttcggtagattatgatagtgctatgtctcatgagcgtgtaggcgaaaacggcatcgaaaacgggt 22007277  T
Q  253 taacggtttggattttacgcgcgaaaacgtgaa 285  Q
    ||||||||||| ||||| |||||||||||||||    
T  22007278 taacggtttggtttttatgcgcgaaaacgtgaa 22007310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 170 - 278
Target Start/End: Original strand, 21399113 - 21399220
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    ||||||| ||||||| ||| ||||||||||||||| |  |||||||||||||||||||||||||||| ||||| ||| | | ||||||||||| ||||||    
T  21399113 tggttgagacttgaaattt-ctgtagattatgataaacttaagtgtcaggagcgtgtaggcgaaaacgacatcaaaatccgattaacggtttgaatttta 21399211  T
Q  270 cgcgcgaaa 278  Q
    |||||||||    
T  21399212 cgcgcgaaa 21399220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 170 - 287
Target Start/End: Original strand, 20197648 - 20197764
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    ||||||| ||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||  || | ||| | | ||||||||||  ||||||    
T  20197648 tggttgagacttgaaattt-ctgtagattatgatagagttaagtgtcaggagcgtgtaggcgaaaacggcaacaaaatccgattaacggtttaaatttta 20197746  T
Q  270 cgcgcgaaaacgtgaaaa 287  Q
    |||||||||  |||||||    
T  20197747 cgcgcgaaatggtgaaaa 20197764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 172 - 279
Target Start/End: Complemental strand, 20711644 - 20711537
Alignment:
Q  172 gttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacg 271  Q
    ||||||||||||||||||||||| |||| ||||| ||||||||||| || | |||||| |||||| ||||||||||| | |||||||||||  ||||| |    
T  20711644 gttgaaacttgaatttttctgtacattaagatagggctaagtgtcatgaacatgtaggtgaaaacgacatcgaaaacagattaacggtttgatttttatg 20711545  T
Q  272 cgcgaaaa 279  Q
    || |||||    
T  20711544 cgtgaaaa 20711537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 77 - 282
Target Start/End: Complemental strand, 21204589 - 21204384
Alignment:
Q  77 tttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccattttg-aaaatgagtgtttatgcaaggttctggaaatcgatatttg-ggtggtt 174  Q
    |||||||||||||| ||||||||| ||||| |||  || | |||| ||||| ||||||||||||| ||  |||||    |||| || ||||| ||| |||    
T  21204589 tttgggagaaaacgggagtttcgtttgaaaattcatttgttaaccgttttggaaaatgagtgtttgtgtgaggtttataaaat-ga-atttgaggttgtt 21204492  T
Q  175 gaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgc 274  Q
    |||||| | |||||||| |  |||||||||| ||||||||| |||||| |||||| ||||||  |||||||||||| |||||||||||  ||||| ||||    
T  21204491 gaaactgggatttttctatgcattatgatagtgctaagtgttaggagcatgtaggtgaaaacggcatcgaaaacggattaacggtttgatttttatgcgc 21204392  T
Q  275 gaaaacgt 282  Q
    ||||||||    
T  21204391 gaaaacgt 21204384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 170 - 279
Target Start/End: Original strand, 9730912 - 9731020
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    |||||||||| |||| |||| ||||||||||||||| || |||||| |||||| |||||||||||||  | |||||||||| |||||||||||  |||||    
T  9730912 tggttgaaacatgaaatttt-tgtagattatgatagtgccaagtgttaggagcatgtaggcgaaaacggcgtcgaaaacggattaacggtttgattttta 9731010  T
Q  270 cgcgcgaaaa 279  Q
     |||||||||    
T  9731011 tgcgcgaaaa 9731020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 287
Target Start/End: Complemental strand, 35581864 - 35581643
Alignment:
Q  68 gttgagtcgtttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccatttt-gaaaatgagtgtttatgcaaggttctggaaatcgatattt 166  Q
    ||||||||||||||||||||||| |  ||||||||||||  |||||  | || | |||| |  ||| |||| |||||  ||||| ||||||  ||  |||    
T  35581864 gttgagtcgtttgggagaaaacgggtttttcgtgtgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaatgactttt 35581765  T
Q  167 ggg-tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggat 265  Q
    ||| |||||||||| |||| |||| | ||||||||| |||||  ||||||||||| |||||||| ||||||  |||| ||| | | ||||||||||| ||    
T  35581764 gggatggttgaaacatgaaattttttatagattatgttagagtcaagtgtcaggatcgtgtaggtgaaaacggcatcaaaatccgattaacggtttgcat 35581665  T
Q  266 tttacgcgcgaaaacgtgaaaa 287  Q
    |||||||||||||  |||||||    
T  35581664 tttacgcgcgaaatagtgaaaa 35581643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 287
Target Start/End: Original strand, 36990198 - 36990419
Alignment:
Q  68 gttgagtcgtttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccatttt-gaaaatgagtgtttatgcaaggttctggaaatcgatattt 166  Q
    ||||||||||||||||||||||| |  ||||||||||||  |||||  | || | |||| |  ||| |||| |||||  ||||| ||||||  ||  |||    
T  36990198 gttgagtcgtttgggagaaaacgggtttttcgtgtgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaatgactttt 36990297  T
Q  167 ggg-tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggat 265  Q
    ||| |||||||||| |||| |||| | ||||||||| |||||  ||||||||||| |||||||| ||||||  |||| ||| | | ||||||||||| ||    
T  36990298 gggatggttgaaacatgaaattttttatagattatgttagagtcaagtgtcaggatcgtgtaggtgaaaacggcatcaaaatccgattaacggtttgcat 36990397  T
Q  266 tttacgcgcgaaaacgtgaaaa 287  Q
    |||||||||||||  |||||||    
T  36990398 tttacgcgcgaaatagtgaaaa 36990419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 170 - 287
Target Start/End: Original strand, 1220050 - 1220166
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    ||||| |||| |||| |||| ||||||||||| |||||  |||||||| ||||||||||||||||||  |||| ||| | | ||||||||||| ||||||    
T  1220050 tggttaaaacatgaaatttt-tgtagattatgttagagtcaagtgtcaagagcgtgtaggcgaaaacggcatcaaaatccgattaacggtttgaatttta 1220148  T
Q  270 cgcgcgaaaacgtgaaaa 287  Q
    |||||||||  |||||||    
T  1220149 cgcgcgaaatggtgaaaa 1220166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 170 - 287
Target Start/End: Original strand, 10778498 - 10778614
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    ||||||| || |||| |||| ||||||||||| |||||  |||||||| ||||||||||||||||||  |||| ||| | | ||||||||||| ||||||    
T  10778498 tggttgagacatgaaatttt-tgtagattatgttagagtcaagtgtcaagagcgtgtaggcgaaaacggcatcaaaatccgattaacggtttgaatttta 10778596  T
Q  270 cgcgcgaaaacgtgaaaa 287  Q
    |||||||||  |||||||    
T  10778597 cgcgcgaaatggtgaaaa 10778614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 68 - 287
Target Start/End: Original strand, 21932809 - 21933029
Alignment:
Q  68 gttgagtcgtttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccatttt-gaaaatgagtgtttatgcaaggttctggaaatcgatattt 166  Q
    ||||||||||||||||||||||| |  ||||||||||||  |||||  | || | |||| |  ||| |||| |||||  ||||| ||||||  ||  |||    
T  21932809 gttgagtcgtttgggagaaaacgggtttttcgtgtgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaatgactttt 21932908  T
Q  167 ggg-tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggat 265  Q
    ||| |||||||||| |||| |||| | ||||||||| |||||  ||||||||||| | |||||| ||||||| |||| ||| | | ||||||||||| ||    
T  21932909 gggatggttgaaacatgaaatttt-tatagattatgttagagtcaagtgtcaggatcatgtaggtgaaaacagcatcaaaatccgattaacggtttgcat 21933007  T
Q  266 tttacgcgcgaaaacgtgaaaa 287  Q
    |||||||||||||  |||||||    
T  21933008 tttacgcgcgaaatggtgaaaa 21933029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 68 - 287
Target Start/End: Original strand, 21938979 - 21939199
Alignment:
Q  68 gttgagtcgtttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccatttt-gaaaatgagtgtttatgcaaggttctggaaatcgatattt 166  Q
    ||||||||||||||||||||||| |  ||||||||||||  |||||  | || | |||| |  ||| |||| |||||  ||||| ||||||  ||  |||    
T  21938979 gttgagtcgtttgggagaaaacgggtttttcgtgtgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaatgactttt 21939078  T
Q  167 ggg-tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggat 265  Q
    ||| |||||||||| |||| |||| | ||||||||| |||||  ||||||||||| | |||||| ||||||| |||| ||| | | ||||||||||| ||    
T  21939079 gggatggttgaaacatgaaatttt-tatagattatgttagagtcaagtgtcaggatcatgtaggtgaaaacagcatcaaaatccgattaacggtttgcat 21939177  T
Q  266 tttacgcgcgaaaacgtgaaaa 287  Q
    |||||||||||||  |||||||    
T  21939178 tttacgcgcgaaatggtgaaaa 21939199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 287
Target Start/End: Complemental strand, 28901924 - 28901824
Alignment:
Q  187 tttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaa 286  Q
    ||||||||||||| | |||||  |||||||| |||||||||||||||||| |||||  || | | ||||||||||| |||||||||||||||  ||||||    
T  28901924 tttctgtagattaagttagagtcaagtgtcatgagcgtgtaggcgaaaacgacatcataatccgattaacggtttgaattttacgcgcgaaatggtgaaa 28901825  T
Q  287 a 287  Q
    |    
T  28901824 a 28901824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 287
Target Start/End: Complemental strand, 28938319 - 28938219
Alignment:
Q  187 tttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaa 286  Q
    ||||||||||||| | |||||  |||||||| |||||||||||||||||| |||||  || | | ||||||||||| |||||||||||||||  ||||||    
T  28938319 tttctgtagattaagttagagtcaagtgtcatgagcgtgtaggcgaaaacgacatcataatccgattaacggtttgaattttacgcgcgaaatggtgaaa 28938220  T
Q  287 a 287  Q
    |    
T  28938219 a 28938219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 170 - 277
Target Start/End: Complemental strand, 23514285 - 23514179
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    |||||||||| |||| |||| ||||||||||  |||||  |||||||||||||||||||||||||||  |||| ||| | | ||||||||||| ||||||    
T  23514285 tggttgaaacatgaaatttt-tgtagattatcttagagtcaagtgtcaggagcgtgtaggcgaaaacggcatcaaaatccgattaacggtttgaatttta 23514187  T
Q  270 cgcgcgaa 277  Q
    || |||||    
T  23514186 cgtgcgaa 23514179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 170 - 287
Target Start/End: Original strand, 22883616 - 22883732
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    |||||||||| |||| |||| | ||||||||| |||||  ||||||||||| |||||||| ||||||  |||| ||| | | ||||||||||| ||||||    
T  22883616 tggttgaaacatgaaatttt-tatagattatgttagagtcaagtgtcaggatcgtgtaggtgaaaacggcatcaaaatccgattaacggtttgcatttta 22883714  T
Q  270 cgcgcgaaaacgtgaaaa 287  Q
    |||||||||  |||||||    
T  22883715 cgcgcgaaatggtgaaaa 22883732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 173 - 285
Target Start/End: Complemental strand, 22111710 - 22111598
Alignment:
Q  173 ttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgc 272  Q
    ||||||||||||||||||| || |||||||||| |||||||| ||| | | ||| || ||||||  |||||||||| | ||||||| |||  ||||| |     
T  22111710 ttgaaacttgaatttttctatacattatgatagtgctaagtgccagaaacatgtgggtgaaaacggcatcgaaaacagattaacggattgatttttatgt 22111611  T
Q  273 gcgaaaacgtgaa 285  Q
    |||||||||||||    
T  22111610 gcgaaaacgtgaa 22111598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 185 - 283
Target Start/End: Complemental strand, 21650253 - 21650155
Alignment:
Q  185 tttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtg 283  Q
    |||||||||| |||| ||||| ||||||||||  || |  ||||| |||||| ||||| ||||||| |||||||||||  ||||| |||||||||||||    
T  21650253 tttttctgtacattaagatagggctaagtgtcgtgaacaagtaggtgaaaacgacatcaaaaacggattaacggtttgatttttatgcgcgaaaacgtg 21650155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 288
Target Start/End: Complemental strand, 22470548 - 22470453
Alignment:
Q  193 tagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 288  Q
    |||||||||||||| | |||||||||||| ||||||| |||||| ||||||||| | | |||| |||| | |||||||  ||||||  ||||||||    
T  22470548 tagattatgatagaaccaagtgtcaggagagtgtaggagaaaacgacatcgaaatccgattaatggttggaattttacctgcgaaatggtgaaaat 22470453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 31479290 - 31479254
Alignment:
Q  175 gaaacttgaatttttctgtagattatgatagagctaag 212  Q
    |||||||||||||||||||||| |||||||||||||||    
T  31479290 gaaacttgaatttttctgtaga-tatgatagagctaag 31479254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 124; Significance: 1e-63; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 153 - 328
Target Start/End: Complemental strand, 25892 - 25717
Alignment:
Q  153 ggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggt 252  Q
    |||||||||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||   |||||||||||||    
T  25892 ggaaatcgatttttgggtggttgaaacttgaatttttctatagaatatgatagagctaagtgtcaggagcgtgtaggcgaaaacggtatcgaaaacgggt 25793  T
Q  253 taacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtcaggcagaaatcgtacta 328  Q
    ||| |||||||||||||||| |||||| ||||||||||||||| ||||| ||||||||||| ||||||||| ||||    
T  25792 taatggtttggattttacgcacgaaaaagtgaaaattggaaaatctgttattgtctgtcagacagaaatcggacta 25717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 129 - 285
Target Start/End: Original strand, 40480 - 40636
Alignment:
Q  129 aaatgagtgtttatgcaaggttctggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtag 228  Q
    |||| |||| |||||  ||||| ||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||    
T  40480 aaataagtgattatgtgaggttttggaaatcgatttttgggtggttgaaacttgaatctttttgtagattatgatagagctaagtgtcaggagcgtttag 40579  T
Q  229 gcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 285  Q
    ||||||||  ||||||||||||||||||||||||  ||||| | |||||||||||||    
T  40580 gcgaaaacggcatcgaaaacgggttaacggtttgatttttatgtgcgaaaacgtgaa 40636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 123; Significance: 4e-63; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 153 - 323
Target Start/End: Original strand, 17611580 - 17611750
Alignment:
Q  153 ggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggt 252  Q
    |||||||||| |||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||    
T  17611580 ggaaatcgatttttgggtggttgaaacttgaatctttttgtagattatgatagagttaagtgtcaggagcgtgtaggcgaaaacggcatcgaaaacgggt 17611679  T
Q  253 taacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtcaggcagaaatcg 323  Q
    |||||||||||||||||| |||||||||||||||||| ||||| ||| |||||||||||  ||||||||||    
T  17611680 taacggtttggattttacacgcgaaaacgtgaaaattagaaaatctgatgttgtctgtcgagcagaaatcg 17611750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 164 - 285
Target Start/End: Complemental strand, 23451218 - 23451097
Alignment:
Q  164 tttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttgg 263  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||| ||||||||||||     
T  23451218 tttgggtggttgaaacttgaatttttctgtagattatgatagagttaagtgtcaggagcgtgtaggcgaaaacggcatcgaaaacgagttaacggtttga 23451119  T
Q  264 attttacgcgcgaaaacgtgaa 285  Q
     |||||||||||||||||||||    
T  23451118 tttttacgcgcgaaaacgtgaa 23451097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 123 - 285
Target Start/End: Complemental strand, 26220339 - 26220177
Alignment:
Q  123 ttttgaaaatgagtgtttatgcaaggttctggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagc 222  Q
    ||||| ||||||||| |||||  ||||| |||||| | || |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  26220339 ttttgcaaatgagtgattatgtgaggttttggaaaccaatttttgggtggttgaaactgaaatttttctgtagattatgatagagctaagtgtcaggagc 26220240  T
Q  223 gtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 285  Q
    | |||||| |||||  ||||||||||||||||||||||||  ||||| |||||||||||||||    
T  26220239 gcgtaggcaaaaacggcatcgaaaacgggttaacggtttgatttttaggcgcgaaaacgtgaa 26220177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 164 - 283
Target Start/End: Complemental strand, 34302296 - 34302177
Alignment:
Q  164 tttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttgg 263  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||| ||||    
T  34302296 tttgggtggttgaaacttgaatttttccgtagattatgatagagctaagtgttaggagcgtgtaggcgaaaacggcatcgaaaacgggttaacggcttgg 34302197  T
Q  264 attttacgcgcgaaaacgtg 283  Q
     ||||| |||||||||||||    
T  34302196 tttttatgcgcgaaaacgtg 34302177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 123 - 285
Target Start/End: Original strand, 26222546 - 26222708
Alignment:
Q  123 ttttgaaaatgagtgtttatgcaaggttctggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagc 222  Q
    ||||| ||||||||| |||||  ||||| |||||| | || |||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||    
T  26222546 ttttgcaaatgagtgattatgtgaggttttggaaaccaatttttgggtggttgaaactgaaatttttctgtagattgtgatagagctaagtgtcaggagc 26222645  T
Q  223 gtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 285  Q
    | ||||||||||||  ||||||||||||||||||||||||  ||||| |||||||||| ||||    
T  26222646 gcgtaggcgaaaacggcatcgaaaacgggttaacggtttgatttttaggcgcgaaaacatgaa 26222708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 168 - 276
Target Start/End: Complemental strand, 24496345 - 24496237
Alignment:
Q  168 ggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattt 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| || |||    
T  24496345 ggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacgccatcgaaaacgggttaacggttaggtttt 24496246  T
Q  268 tacgcgcga 276  Q
    || ||||||    
T  24496245 tatgcgcga 24496237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 164 - 285
Target Start/End: Complemental strand, 3273634 - 3273513
Alignment:
Q  164 tttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttgg 263  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||  |||| |||||||||||||| |||||    
T  3273634 tttgggtggttgaaacttgaatttatctgtagaatatgatagagctaagtgtcaggagcgtgtaggcgaaaacggcatcaaaaacgggttaacgatttgg 3273535  T
Q  264 attttacgcgcgaaaacgtgaa 285  Q
     ||||| ||||| |||||||||    
T  3273534 tttttatgcgcggaaacgtgaa 3273513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 153 - 256
Target Start/End: Complemental strand, 24979874 - 24979771
Alignment:
Q  153 ggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggt 252  Q
    ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||    
T  24979874 ggaaatcaatttttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacggcatcgaaaatgggt 24979775  T
Q  253 taac 256  Q
    ||||    
T  24979774 taac 24979771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 77 - 286
Target Start/End: Complemental strand, 20481266 - 20481056
Alignment:
Q  77 tttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccattttg--aaaatgagtgtttatgcaaggttctggaaatcgatatttgggtg-gt 173  Q
    |||||||||||||| |||||||| |||||| ||| ||| | |||| |||||  ||||||||||||  || |||| | ||||||  || |||||||   ||    
T  20481266 tttgggagaaaacgggagtttcgggtgaaaattcaattgttaaccgttttggaaaaatgagtgttg-tgtaaggctttggaaaatga-atttgggaatgt 20481169  T
Q  174 tgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcg 273  Q
    ||||||||||||||||||||| |||| ||||| | |||||||||||||| |||||||||||||  ||||||||||||||||||||||||| |||||||||    
T  20481168 tgaaacttgaatttttctgtacattaagatagggttaagtgtcaggagcatgtaggcgaaaacggcatcgaaaacgggttaacggtttggtttttacgcg 20481069  T
Q  274 cgaaaacgtgaaa 286  Q
    ||||||| |||||    
T  20481068 cgaaaacttgaaa 20481056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 152 - 285
Target Start/End: Original strand, 22583948 - 22584081
Alignment:
Q  152 tggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacggg 251  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| | |||||| ||||||  |||||||||  |     
T  22583948 tggaaatcgatttttgggtggttgaaacttgaatttttttgtagattatgatagggctaagtgtcaggaacatgtaggtgaaaacggcatcgaaaataga 22584047  T
Q  252 ttaacggtttggattttacgcgcgaaaacgtgaa 285  Q
    |||||||||||  ||||| |||| ||||||||||    
T  22584048 ttaacggtttgttttttatgcgcaaaaacgtgaa 22584081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 172 - 285
Target Start/End: Original strand, 30766220 - 30766333
Alignment:
Q  172 gttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacg 271  Q
    |||||||||| | |||||| ||||||||||||||||||| || ||| ||||||||||||||||||  ||| |||||||||||||||||| || |||||||    
T  30766220 gttgaaactttagtttttcggtagattatgatagagctatgtctcatgagcgtgtaggcgaaaacggcattgaaaacgggttaacggttgggtttttacg 30766319  T
Q  272 cgcgaaaacgtgaa 285  Q
    ||||||||||||||    
T  30766320 cgcgaaaacgtgaa 30766333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 170 - 287
Target Start/End: Complemental strand, 17501914 - 17501798
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    ||||||||||||||| ||| ||||||||||||||||||| |||||||||| ||||||||||||||||  |||| ||| | | ||||||||||| ||||||    
T  17501914 tggttgaaacttgaaattt-ctgtagattatgatagagccaagtgtcaggggcgtgtaggcgaaaacggcatcaaaatccgattaacggtttgaatttta 17501816  T
Q  270 cgcgcgaaaacgtgaaaa 287  Q
    |||||||||  |||||||    
T  17501815 cgcgcgaaatggtgaaaa 17501798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 152 - 285
Target Start/End: Complemental strand, 23889563 - 23889431
Alignment:
Q  152 tggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacggg 251  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| | | |||| | |||||| ||||||  |||||||||| |     
T  23889563 tggaaatcgat-tttgggtggttgaaacttgaatttttctgtagattatgatagggctaaatattaggaacatgtaggtgaaaacggcatcgaaaacaga 23889465  T
Q  252 ttaacggtttggattttacgcgcgaaaacgtgaa 285  Q
    |||||||||||  ||| | ||||||||| |||||    
T  23889464 ttaacggtttgattttaatgcgcgaaaatgtgaa 23889431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 134 - 287
Target Start/End: Complemental strand, 39114878 - 39114725
Alignment:
Q  134 agtgtttatgcaaggttctggaaatcgatatttggg-tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcga 232  Q
    ||||||||||| ||||| ||||||  ||| |||||| || ||||||| || | |||| ||||||||||| |||||  |||||||||||||||||||||||    
T  39114878 agtgtttatgcgaggttttggaaaatgatttttgggatgattgaaacatggaatttt-tgtagattatgttagagtcaagtgtcaggagcgtgtaggcga 39114780  T
Q  233 aaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 287  Q
    |||||||||| ||| | | |||||| |||| |||||||||||||||  |||||||    
T  39114779 aaacaacatcaaaatccgattaacgatttgaattttacgcgcgaaatggtgaaaa 39114725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 170 - 287
Target Start/End: Complemental strand, 4233630 - 4233514
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    ||||||| ||||||| |||  ||||||||||||||||  |||||||||||||||||||||||||||| ||||| ||| | | ||||||||||| ||||||    
T  4233630 tggttgagacttgaaattta-tgtagattatgatagatttaagtgtcaggagcgtgtaggcgaaaacgacatcaaaatccgattaacggtttgaatttta 4233532  T
Q  270 cgcgcgaaaacgtgaaaa 287  Q
    |||||||||  |||||||    
T  4233531 cgcgcgaaatggtgaaaa 4233514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 193 - 290
Target Start/End: Original strand, 22532466 - 22532563
Alignment:
Q  193 tagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattg 290  Q
    |||||||||||||||| ||||||||||||||||||||||||||| ||||| ||| | | ||||||||||| ||||||| |||||||  ||||||||||    
T  22532466 tagattatgatagagccaagtgtcaggagcgtgtaggcgaaaacgacatcaaaatccgattaacggtttgaattttacacgcgaaatggtgaaaattg 22532563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 193 - 290
Target Start/End: Original strand, 22537151 - 22537248
Alignment:
Q  193 tagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattg 290  Q
    |||||||||||||||| ||||||||||||||||||||||||||| ||||| ||| | | ||||||||||| ||||||| |||||||  ||||||||||    
T  22537151 tagattatgatagagccaagtgtcaggagcgtgtaggcgaaaacgacatcaaaatccgattaacggtttgaattttacacgcgaaatggtgaaaattg 22537248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 170 - 282
Target Start/End: Original strand, 13721456 - 13721567
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    |||||||||| |||| |||| ||||||||||||||| || |||||| |||||| |||||||||||||  |||||||||||| |||||||||||  |||||    
T  13721456 tggttgaaacatgaaatttt-tgtagattatgatagtgccaagtgttaggagcatgtaggcgaaaacggcatcgaaaacggattaacggtttgattttta 13721554  T
Q  270 cgcgcgaaaacgt 282  Q
     ||||||||||||    
T  13721555 tgcgcgaaaacgt 13721567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 172 - 283
Target Start/End: Complemental strand, 274007 - 273896
Alignment:
Q  172 gttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacg 271  Q
    ||||||||||| ||||||||||  ||||||||||  |||||||| |||||| |||||| ||||||  |||||||||||| |||||||||||  ||||| |    
T  274007 gttgaaacttggatttttctgtgcattatgatagtactaagtgttaggagcatgtaggtgaaaacggcatcgaaaacggattaacggtttgatttttatg 273908  T
Q  272 cgcgaaaacgtg 283  Q
    ||||||||||||    
T  273907 cgcgaaaacgtg 273896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 172 - 283
Target Start/End: Original strand, 641842 - 641953
Alignment:
Q  172 gttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacg 271  Q
    ||||||||||| ||||||||||  ||||||||||  |||||||| |||||| |||||| ||||||  |||||||||||| |||||||||||  ||||| |    
T  641842 gttgaaacttggatttttctgtgcattatgatagtactaagtgttaggagcatgtaggtgaaaacggcatcgaaaacggattaacggtttgatttttatg 641941  T
Q  272 cgcgaaaacgtg 283  Q
    ||||||||||||    
T  641942 cgcgaaaacgtg 641953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 172 - 283
Target Start/End: Original strand, 827648 - 827759
Alignment:
Q  172 gttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacg 271  Q
    ||||||||||| ||||||||||  ||||||||||  |||||||| |||||| |||||| ||||||  |||||||||||| |||||||||||  ||||| |    
T  827648 gttgaaacttggatttttctgtgcattatgatagtactaagtgttaggagcatgtaggtgaaaacggcatcgaaaacggattaacggtttgatttttatg 827747  T
Q  272 cgcgaaaacgtg 283  Q
    ||||||||||||    
T  827748 cgcgaaaacgtg 827759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 172 - 282
Target Start/End: Original strand, 16039569 - 16039679
Alignment:
Q  172 gttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacg 271  Q
    ||||||||| | ||||||||||  |||||||||| ||||||||| |||||| |||||| |||||| ||||||||||||| |||| ||||||  ||||| |    
T  16039569 gttgaaactgggatttttctgtgcattatgatagtgctaagtgttaggagcatgtaggtgaaaacgacatcgaaaacggattaatggtttgatttttatg 16039668  T
Q  272 cgcgaaaacgt 282  Q
    |||||||||||    
T  16039669 cgcgaaaacgt 16039679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 68 - 287
Target Start/End: Original strand, 271788 - 272009
Alignment:
Q  68 gttgagtcgtttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccatttt-gaaaatgagtgtttatgcaaggttctggaaatcgatattt 166  Q
    ||||||||||||||||||||||| |  ||||||||||||  |||||  | || | |||| |  |||||||| |||||  ||||| ||||||  ||  |||    
T  271788 gttgagtcgtttgggagaaaacgggtttttcgtgtgaaatgtcgatgtttaagcgttttcgccaatgagtgattatgtgaggttttggaaaatgactttt 271887  T
Q  167 ggg-tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggat 265  Q
    ||| |||||||||| |||| |||| | ||||||||| |||||  ||||||||||| |||||||| ||||||  |||| ||| | | ||||||||||| ||    
T  271888 gggatggttgaaacatgaaattttttatagattatgttagagtcaagtgtcaggatcgtgtaggtgaaaacggcatcaaaatccgattaacggtttgcat 271987  T
Q  266 tttacgcgcgaaaacgtgaaaa 287  Q
    |||||||||||||  |||||||    
T  271988 tttacgcgcgaaatagtgaaaa 272009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 68 - 287
Target Start/End: Complemental strand, 829867 - 829646
Alignment:
Q  68 gttgagtcgtttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccatttt-gaaaatgagtgtttatgcaaggttctggaaatcgatattt 166  Q
    ||||||||||||||||||||||| |  ||||||||||||  |||||  | || | |||| |  |||||||| |||||  ||||| ||||||  ||  |||    
T  829867 gttgagtcgtttgggagaaaacgggtttttcgtgtgaaatgtcgatgtttaagcgttttcgccaatgagtgattatgtgaggttttggaaaatgactttt 829768  T
Q  167 ggg-tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggat 265  Q
    ||| |||||||||| |||| |||| | ||||||||| |||||  ||||||||||| |||||||| ||||||  |||| ||| | | ||||||||||| ||    
T  829767 gggatggttgaaacatgaaattttttatagattatgttagagtcaagtgtcaggatcgtgtaggtgaaaacggcatcaaaatccgattaacggtttgcat 829668  T
Q  266 tttacgcgcgaaaacgtgaaaa 287  Q
    |||||||||||||  |||||||    
T  829667 tttacgcgcgaaatagtgaaaa 829646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 68 - 287
Target Start/End: Original strand, 13662692 - 13662912
Alignment:
Q  68 gttgagtcgtttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccatttt-gaaaatgagtgtttatgcaaggttctggaaatcgatattt 166  Q
    ||||||||||||||||||||||| |  ||||||||||||  |||||  | || | |||| |  ||| |||| |||||  ||||| ||||||  ||  |||    
T  13662692 gttgagtcgtttgggagaaaacgggtttttcgtgtgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaatgaatttt 13662791  T
Q  167 ggg-tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggat 265  Q
    ||| |||||||||| |||| |||| ||||||||||| |||||  |||| ||||||||||||||||||||||  |||| ||| | | ||||||||||| ||    
T  13662792 gggatggttgaaacatgaaatttt-tgtagattatgttagagtcaagtctcaggagcgtgtaggcgaaaacggcatcaaaatccgattaacggtttgaat 13662890  T
Q  266 tttacgcgcgaaaacgtgaaaa 287  Q
    |||||||||||||  |||||||    
T  13662891 tttacgcgcgaaatggtgaaaa 13662912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 170 - 282
Target Start/End: Original strand, 16873579 - 16873690
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    |||||||||| |||| |||| |||| |||||||||| || |||||| |||||| |||||||||||||  |||||||||||| |||||||||||  |||||    
T  16873579 tggttgaaacatgaaatttt-tgtaaattatgatagtgccaagtgttaggagcatgtaggcgaaaacggcatcgaaaacggattaacggtttgattttta 16873677  T
Q  270 cgcgcgaaaacgt 282  Q
     ||||||||||||    
T  16873678 tgcgcgaaaacgt 16873690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 77 - 279
Target Start/End: Original strand, 24386337 - 24386539
Alignment:
Q  77 tttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccattttg-aaaatgagtgtttatgcaaggttctggaaatcgatatttg-ggtggtt 174  Q
    |||||||||||||| ||||||||| ||||| |||  || | |||||||||| ||||||||||||| ||  ||||| || |||  || ||||| ||| |||    
T  24386337 tttgggagaaaacgggagtttcgtttgaaaattcatttgttaaccattttggaaaatgagtgtttgtgtgaggtt-tgtaaaatga-atttgaggttgtt 24386434  T
Q  175 gaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgc 274  Q
    ||||||   |||||||| |  |||||||||| ||||||||| | |||| |||||| |||||| ||||||||||||| |||||||||||  ||||| ||||    
T  24386435 gaaactgagatttttctatgcattatgatagtgctaagtgttaagagcatgtaggtgaaaacgacatcgaaaacggattaacggtttgatttttatgcgc 24386534  T
Q  275 gaaaa 279  Q
    |||||    
T  24386535 gaaaa 24386539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 192 - 288
Target Start/End: Original strand, 39694611 - 39694707
Alignment:
Q  192 gtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 288  Q
    ||||||||||||||| | |||||||||||| ||||||||||| || ||||| ||| | | ||||||||||| |||||||||||||||  ||||||||    
T  39694611 gtagattatgatagaaccaagtgtcaggagagtgtaggcgaatacgacatcaaaatccgattaacggtttgtattttacgcgcgaaatggtgaaaat 39694707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 170 - 272
Target Start/End: Original strand, 24717395 - 24717496
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    |||||||||| |||| |||| ||||||||||| ||||| ||||||||||||||||||||||||||||  |||| ||| | | |||||||| || ||||||    
T  24717395 tggttgaaacatgaaatttt-tgtagattatgttagagttaagtgtcaggagcgtgtaggcgaaaacggcatcaaaatccgattaacggtatgaatttta 24717493  T
Q  270 cgc 272  Q
    |||    
T  24717494 cgc 24717496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 170 - 288
Target Start/End: Complemental strand, 39364513 - 39364396
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    ||||||| ||||||| || | ||||||||| |||||||| |||||||||||||||||||||||||||  || | ||| | | ||||||||| | ||||||    
T  39364513 tggttgagacttgaaattgt-tgtagattaagatagagccaagtgtcaggagcgtgtaggcgaaaacggcaccaaaatccgattaacggttggaatttta 39364415  T
Q  270 cgcgcgaaaacgtgaaaat 288  Q
    |||||||||  ||||||||    
T  39364414 cgcgcgaaatggtgaaaat 39364396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 170 - 279
Target Start/End: Original strand, 3431810 - 3431918
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    |||||||||| |||| |||| ||||||||||||||| |  |||||| |||||| |||||||||||||  |||||||||||| |||||||||||  |||||    
T  3431810 tggttgaaacatgaaatttt-tgtagattatgatagtgtcaagtgttaggagcatgtaggcgaaaacggcatcgaaaacggattaacggtttgattttta 3431908  T
Q  270 cgcgcgaaaa 279  Q
     || ||||||    
T  3431909 tgcacgaaaa 3431918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 68 - 287
Target Start/End: Original strand, 22006688 - 22006908
Alignment:
Q  68 gttgagtcgtttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccatttt-gaaaatgagtgtttatgcaaggttctggaaatcgatattt 166  Q
    ||||||||||||||||||||||| |  ||||||||||||  |||||  | || | |||| |  ||| |||| |||||  ||||| ||||||  ||  |||    
T  22006688 gttgagtcgtttgggagaaaacgggtttttcgtgtgaaatgtcgatgtttaagcgttttcgtcaataagtgattatgtgaggttttggaaaatgactttt 22006787  T
Q  167 ggg-tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggat 265  Q
    ||| |||||||||| |||| |||| ||||||||||| |||||  |||||||| ||||||||||||||||||  |||| ||| | | ||||| ||||  ||    
T  22006788 gggatggttgaaacatgaaatttt-tgtagattatgttagagtcaagtgtcaagagcgtgtaggcgaaaacggcatcaaaatccgattaacagtttaaat 22006886  T
Q  266 tttacgcgcgaaaacgtgaaaa 287  Q
    |||||||||||||  |||||||    
T  22006887 tttacgcgcgaaatggtgaaaa 22006908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 173 - 278
Target Start/End: Complemental strand, 23809560 - 23809455
Alignment:
Q  173 ttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgc 272  Q
    |||||| | |||||||| |||| | | |||||||| ||||| ||||||||| |||| ||||||    ||||||||||| |||||||||||||||||||||    
T  23809560 ttgaaaatggaatttttatgtacaatgtgatagagttaagtttcaggagcgcgtagacgaaaatggaatcgaaaacggattaacggtttggattttacgc 23809461  T
Q  273 gcgaaa 278  Q
    ||||||    
T  23809460 gcgaaa 23809455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 170 - 287
Target Start/End: Original strand, 15319690 - 15319807
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    |||||||||| |||| |||| | ||||||||| |||||  ||||||||||| |||||||| ||||||  |||| ||| | | ||||||||||| ||||||    
T  15319690 tggttgaaacatgaaattttttatagattatgttagagtcaagtgtcaggatcgtgtaggtgaaaacggcatcaaaatccgattaacggtttgcatttta 15319789  T
Q  270 cgcgcgaaaacgtgaaaa 287  Q
    |||| ||||  |||||||    
T  15319790 cgcgtgaaatggtgaaaa 15319807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 170 - 287
Target Start/End: Original strand, 15500059 - 15500176
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    |||||||||| |||| |||| | ||||||||| |||||  ||||||||||| |||||||| ||||||  |||| ||| | | ||||||||||| ||||||    
T  15500059 tggttgaaacatgaaattttttatagattatgttagagtcaagtgtcaggatcgtgtaggtgaaaacggcatcaaaatccgattaacggtttgcatttta 15500158  T
Q  270 cgcgcgaaaacgtgaaaa 287  Q
    |||| ||||  |||||||    
T  15500159 cgcgtgaaatggtgaaaa 15500176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 190 - 288
Target Start/End: Complemental strand, 32950624 - 32950525
Alignment:
Q  190 ctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaa-acgggttaacggtttggattttacgcgcgaaaacgtgaaaat 288  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||  || | |||  ||  ||||||||| | |||||||||||||||  ||||||||    
T  32950624 ctgtagattatgatagagccaagtgtcaggagagtgtaggcgaaaacggcaccaaaatccgaattaacggttggaattttacgcgcgaaatggtgaaaat 32950525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 190 - 288
Target Start/End: Original strand, 44522508 - 44522606
Alignment:
Q  190 ctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 288  Q
    |||||||||| |||||||| |||||||||||||||| ||||||||||| || | ||| | | |||||| ||   |||||||||||||||  ||||||||    
T  44522508 ctgtagattaagatagagccaagtgtcaggagcgtggaggcgaaaacagcaccaaaatccgattaacgattgaaattttacgcgcgaaatggtgaaaat 44522606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 287
Target Start/End: Complemental strand, 644028 - 643912
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    |||||||||| |||| |||| | ||||||||| |||||  ||||||||||| | |||||| ||||||  |||| ||| | | ||||||||||| ||||||    
T  644028 tggttgaaacatgaaatttt-tatagattatgttagagtcaagtgtcaggatcatgtaggtgaaaacggcatcaaaatccgattaacggtttgcatttta 643930  T
Q  270 cgcgcgaaaacgtgaaaa 287  Q
    |||||||||  |||||||    
T  643929 cgcgcgaaatggtgaaaa 643912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 287
Target Start/End: Complemental strand, 24239412 - 24239270
Alignment:
Q  146 aggttctggaaatcgatatttggg-tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcga 244  Q
    ||||| ||||||  ||| |||||| ||| |||||||||||||||| ||||| ||| ||||||||| | || || ||| | |||||||||||| ||||| |    
T  24239412 aggttttggaaaatgatttttgggatggctgaaacttgaatttttatgtaggttacgatagagctgaatgacatgagtgcgtaggcgaaaacgacatcaa 24239313  T
Q  245 aaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 287  Q
    |  | | |||||| |||| |||||| ||||||||  |||||||    
T  24239312 attccgattaacgatttgaattttatgcgcgaaagggtgaaaa 24239270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 198 - 285
Target Start/End: Complemental strand, 24624517 - 24624430
Alignment:
Q  198 tatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 285  Q
    |||||||||||||||||| ||||||  ||||||||||||   || |||||||| |||||| |||| ||| || | |||||||| ||||    
T  24624517 tatgatagagctaagtgtaaggagcacgtaggcgaaaacggaattgaaaacggattaacgatttgaattctaagtgcgaaaacatgaa 24624430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1957 (Bit Score: 122; Significance: 2e-62; HSPs: 1)
Name: scaffold1957
Description:

Target: scaffold1957; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 146 - 328
Target Start/End: Original strand, 99 - 273
Alignment:
Q  146 aggttctggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaa 245  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||| ||    
T  99 aggttctggaaatcgatctttgggtggttgaaacttgaatttttctgtagattatgttagagctaagtgtcaggagcgtgtaggcaaaaacgacatcaaa 198  T
Q  246 aacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtcaggcagaaatcgtacta 328  Q
    |||||||||||||||||||||||| |        |||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  199 aacgggttaacggtttggattttatg--------cgtgaaaattggaaaatctgatgttgtctgtcaggcagaaatcgtacta 273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 121; Significance: 6e-62; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 68 - 323
Target Start/End: Complemental strand, 146272 - 146015
Alignment:
Q  68 gttgagtcgttt-gggagaaaacgagagtttcgtgtgaaacttcgattatgaaccattttg--aaaatgagtgtttatgcaaggttctggaaatcgatat 164  Q
    |||||||||||| ||||||||||  |||||||| || ||| ||| ||| | ||||||||||  ||||||||||||  || |||| | ||||||  || ||    
T  146272 gttgagtcgttttgggagaaaacaggagtttcgggtaaaaattcaattgttaaccattttggaaaaatgagtgttg-tgtaaggctgtggaaaatga-at 146175  T
Q  165 ttgggtg-gttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttgg 263  Q
    |||||   ||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  146174 ttgggaatgttgaaacttgaatttttctgtacattaagatagggctaagtgtcaggagcgtgtaggcgaaaacggcatcgaaaacgggttaacggtttgg 146075  T
Q  264 attttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtcaggcagaaatcg 323  Q
     ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  146074 tttttacgcgcgaaaacgtgaaaattggaaaatctgatgttgtctgtcaggcagaaatcg 146015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 113; Significance: 4e-57; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 146 - 294
Target Start/End: Original strand, 25804 - 25952
Alignment:
Q  146 aggttctggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaa 245  Q
    ||||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  25804 aggttttggaaatcgattttttggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacggcatcgaa 25903  T
Q  246 aacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaa 294  Q
    |||||||||||||||||| ||||| |||||||||||||||  |||||||    
T  25904 aacgggttaacggtttggtttttatgcgcgaaaacgtgaaggttggaaa 25952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 113; Significance: 4e-57; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 7 - 143
Target Start/End: Original strand, 68226 - 68362
Alignment:
Q  7 tttggtgttttgggtgagttagacaaattgaattttttgttttgacgttaagaaaatggttgttgagtcgtttgggagaaaacgagagtttcgtgtgaaa 106  Q
    |||| |||||||||||||||||| |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  68226 tttgttgttttgggtgagttagataaattgaattttctattttgacgttaagaaaatggttgttgagtcgtttgggagaaaacgagagtttcgtgtgaaa 68325  T
Q  107 cttcgattatgaaccattttgaaaatgagtgtttatg 143  Q
    ||||||||  |||||||||||||||||||||||||||    
T  68326 cttcgattgcgaaccattttgaaaatgagtgtttatg 68362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 110; Significance: 2e-55; HSPs: 4)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 71 - 328
Target Start/End: Complemental strand, 4237 - 3978
Alignment:
Q  71 gagtcgtttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccattttg--aaaatgagtgtttatgcaaggttctggaaatcgatatttgg 168  Q
    ||||||||||||||||| || |||||| | |||||| ||| ||| | |||  |||||  |||||||| |||| || |||| | ||||||  || ||||||    
T  4237 gagtcgtttgggagaaatcgggagttttgggtgaaaattcaattgttaactgttttggaaaaatgagcgtttgtgaaaggctttggaaaatga-atttgg 4139  T
Q  169 gtg-gttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattt 267  Q
    |   ||||||||||||||||||||||| |||| ||||| ||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||| |||    
T  4138 gaatgttgaaacttgaatttttctgtacattaagatagggctaagtgtcaagagcgtgtaggcgaaaacggcatcgaaaacgggttaacggtttggtttt 4039  T
Q  268 tacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtcaggcagaaatcgtacta 328  Q
    |||||||||||||||||||||||||||| ||| | |||||||||||||| |||||| ||||    
T  4038 tacgcgcgaaaacgtgaaaattggaaaatctgatattgtctgtcaggcataaatcggacta 3978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 71 - 328
Target Start/End: Complemental strand, 8851 - 8592
Alignment:
Q  71 gagtcgtttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccattttg--aaaatgagtgtttatgcaaggttctggaaatcgatatttgg 168  Q
    ||||||||||||||||| || |||||| | |||||| ||| ||| | |||  |||||  |||||||| |||| || |||| | ||||||  || ||||||    
T  8851 gagtcgtttgggagaaatcgggagttttgggtgaaaattcaattgttaactgttttggaaaaatgagcgtttgtgaaaggctttggaaaatga-atttgg 8753  T
Q  169 gtg-gttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattt 267  Q
    |   ||||||||||||||||||||||| |||| ||||| ||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||| |||    
T  8752 gaatgttgaaacttgaatttttctgtacattaagatagggctaagtgtcaagagcgtgtaggcgaaaacggcatcgaaaacgggttaacggtttggtttt 8653  T
Q  268 tacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtcaggcagaaatcgtacta 328  Q
    |||||||||||||||||||||||||||| ||| | |||||||||||||| |||||| ||||    
T  8652 tacgcgcgaaaacgtgaaaattggaaaatctgatattgtctgtcaggcataaatcggacta 8592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 288
Target Start/End: Complemental strand, 7574 - 7476
Alignment:
Q  190 ctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 288  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||  |||| ||| | | ||||||||||  |||||||  ||||||  ||||||||    
T  7574 ctgtagattatgatagagccaagtgtcaggagagtgtaggcgaaaacggcatcaaaatccgattaacggtttaaattttacatgcgaaatggtgaaaat 7476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 288
Target Start/End: Complemental strand, 12188 - 12090
Alignment:
Q  190 ctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 288  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||  |||| ||| | | ||||||||||  |||||||  ||||||  ||||||||    
T  12188 ctgtagattatgatagagccaagtgtcaggagagtgtaggcgaaaacggcatcaaaatccgattaacggtttaaattttacatgcgaaatggtgaaaat 12090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 110; Significance: 2e-55; HSPs: 2)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 71 - 328
Target Start/End: Complemental strand, 6845 - 6586
Alignment:
Q  71 gagtcgtttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccattttg--aaaatgagtgtttatgcaaggttctggaaatcgatatttgg 168  Q
    ||||||||||||||||| || |||||| | |||||| ||| ||| | |||  |||||  |||||||| |||| || |||| | ||||||  || ||||||    
T  6845 gagtcgtttgggagaaatcgggagttttgggtgaaaattcaattgttaactgttttggaaaaatgagcgtttgtgaaaggctttggaaaatga-atttgg 6747  T
Q  169 gtg-gttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattt 267  Q
    |   ||||||||||||||||||||||| |||| ||||| ||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||| |||    
T  6746 gaatgttgaaacttgaatttttctgtacattaagatagggctaagtgtcaagagcgtgtaggcgaaaacggcatcgaaaacgggttaacggtttggtttt 6647  T
Q  268 tacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtcaggcagaaatcgtacta 328  Q
    |||||||||||||||||||||||||||| ||| | |||||||||||||| |||||| ||||    
T  6646 tacgcgcgaaaacgtgaaaattggaaaatctgatattgtctgtcaggcataaatcggacta 6586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 288
Target Start/End: Complemental strand, 10183 - 10085
Alignment:
Q  190 ctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 288  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||  |||| ||| | | ||||||||||  |||||||  ||||||  ||||||||    
T  10183 ctgtagattatgatagagccaagtgtcaggagagtgtaggcgaaaacggcatcaaaatccgattaacggtttaaattttacatgcgaaatggtgaaaat 10085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 106; Significance: 5e-53; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 153 - 286
Target Start/End: Complemental strand, 7437 - 7304
Alignment:
Q  153 ggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggt 252  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||  ||||||||||||||    
T  7437 ggaaatcgatttttgggtggttgaaacttgaatttttctgtagattatgatagatctaagtgtcaagagcgtgtaggcgaaaacggcatcgaaaacgggt 7338  T
Q  253 taacggtttggattttacgcgcgaaaacgtgaaa 286  Q
    ||| |||||||||||||||| |||||||||||||    
T  7337 taatggtttggattttacgcacgaaaacgtgaaa 7304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 106; Significance: 5e-53; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 14 - 267
Target Start/End: Original strand, 61589 - 61841
Alignment:
Q  14 ttttgggtgagttagacaaattgaattttttgttttgacgttaagaaaatggttgttgagtcgtttgggagaaaacgagagtttcgtgtgaaacttcgat 113  Q
    |||||||| |||||||||||||||||||| ||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  61589 ttttgggtaagttagacaaattgaattttctgttttgactttaagaaaatggtcgttgagtcttttgggagaaaacgagagtttcgtgtgaaacttcgat 61688  T
Q  114 tatgaaccattttgaaaatgagtgtttatgcaaggttctggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagt 213  Q
    | ||||| ||||||||||| ||||||||||  |||||  || |||   | || || |||||| ||| |||| |||||||| || || ||||||| |||||    
T  61689 tgtgaactattttgaaaataagtgtttatgtgaggtttgggtaatttgttttgggatggttggaacatgaa-ttttctgtggaataagatagagttaagt 61787  T
Q  214 gtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattt 267  Q
    || |||| || |||| ||||||| | ||| ||| ||| ||||||||||| ||||    
T  61788 gtaaggaacgcgtagacgaaaacgaaatcaaaatcggattaacggtttgaattt 61841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 68 - 287
Target Start/End: Original strand, 154434 - 154654
Alignment:
Q  68 gttgagtcgtttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccatttt-gaaaatgagtgtttatgcaaggttctggaaatcgatattt 166  Q
    ||||||||||||||||||||||| |  ||||||||||||  |||||  | || | |||| |  ||| |||| |||||  ||||| ||||||  ||  |||    
T  154434 gttgagtcgtttgggagaaaacgggtttttcgtgtgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaatgactttt 154533  T
Q  167 ggg-tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggat 265  Q
    ||| |||||||||| |||| |||| ||||||||||| |||||  || ||||| ||||||||||| ||||||  |||| ||| | | ||||||||||| ||    
T  154534 gggatggttgaaacatgaaatttt-tgtagattatgttagagtcaaatgtcaagagcgtgtaggagaaaacggcatcaaaatccgattaacggtttgaat 154632  T
Q  266 tttacgcgcgaaaacgtgaaaa 287  Q
    |||||||||||||  |||||||    
T  154633 tttacgcgcgaaattgtgaaaa 154654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 103; Significance: 3e-51; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 14 - 236
Target Start/End: Original strand, 51538 - 51759
Alignment:
Q  14 ttttgggtgagttagacaaattgaattttttgttttgacgttaagaaaatggttgttgagtcgtttgggagaaaacgagagtttcgtgtgaaacttcgat 113  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| | ||||||||||| |||||||||||||||||||||||    
T  51538 ttttgggtgagttagacaaattgaattttctgttttgactttaagaaaatggttgttgagtcatatgggagaaaacaagagtttcgtgtgaaacttcgat 51637  T
Q  114 tatgaaccattttgaaaatgagtgtttatgcaaggttctggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagt 213  Q
    | ||||| ||||||||||||||||||||||  |||||  || |||   | || || |||||| ||| |||| |||||| | || || |||||||||||||    
T  51638 tgtgaactattttgaaaatgagtgtttatgtgaggtttgggcaatttgttttgggatggttggaacatgaa-ttttctatggaataagatagagctaagt 51736  T
Q  214 gtcaggagcgtgtaggcgaaaac 236  Q
    || |||| || |||| |||||||    
T  51737 gtaaggaacgcgtagacgaaaac 51759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0720 (Bit Score: 102; Significance: 1e-50; HSPs: 1)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 152 - 285
Target Start/End: Original strand, 733 - 866
Alignment:
Q  152 tggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacggg 251  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  733 tggaaatcgatttttgggtggttgaaacttgaatttttctatagattatgatagagctaagtgtcaggagcgtttaggcgaaaacgacatcgaaaacggg 832  T
Q  252 ttaacggtttggattttacgcgcgaaaacgtgaa 285  Q
    |||||||||||  ||||| | |||||||||||||    
T  833 ttaacggtttgatttttatgtgcgaaaacgtgaa 866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 153 - 284
Target Start/End: Original strand, 35833 - 35964
Alignment:
Q  153 ggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggt 252  Q
    |||||||||||||| | |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||    
T  35833 ggaaatcgatatttagatggttgaaacttgaatatttctgtagattatgatagagataagtgtcaggagcgtgtaggcgaaaacggcatcgaaaacgggt 35932  T
Q  253 taacggtttggattttacgcgcgaaaacgtga 284  Q
    ||||||||||| ||||| ||||||||||||||    
T  35933 taacggtttggtttttatgcgcgaaaacgtga 35964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 99; Significance: 8e-49; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 173 - 323
Target Start/End: Original strand, 18080 - 18230
Alignment:
Q  173 ttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgc 272  Q
    ||||||||| ||||||| |||| |||| ||| | ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||    
T  18080 ttgaaactttaatttttatgtacattaagattgggctaagtgtcaggagcgtgtaggcgaaaacggcatcgaaaacgggttaacggtttggtttttacgc 18179  T
Q  273 gcgaaaacgtgaaaattggaaaaactgttgttgtctgtcaggcagaaatcg 323  Q
    ||| ||||||||||||| ||||| ||| |||||||||||||||||||||||    
T  18180 gcgtaaacgtgaaaattagaaaatctgatgttgtctgtcaggcagaaatcg 18230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0303 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold0303
Description:

Target: scaffold0303; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 77 - 328
Target Start/End: Original strand, 592 - 843
Alignment:
Q  77 tttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccattttg-aaaatgagtgtttatgcaaggttctggaaatcgatatttgggtg-gtt 174  Q
    |||||||||||||| ||||||||| ||||| |||  || | |||| ||||| ||||||||||||  || |||| | ||||||  || |||||||   |||    
T  592 tttgggagaaaacgggagtttcgtttgaaaattcatttgttaaccgttttggaaaatgagtgttg-tgtaaggctttggaaaatga-atttgggaatgtt 689  T
Q  175 gaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgc 274  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||  |||| ||||||| ||||| |||||| ||||||| ||    
T  690 gaaacttgaatttttctgtacattaagatagagctaagtgtcaggagcgtgtaggcgaaaacggcatccaaaacggattaactgtttggtttttacgtgc 789  T
Q  275 gaaaacgtgaaaattggaaaaactgttgttgtctgtcaggcagaaatcgtacta 328  Q
     ||||||| |||||||||||| ||| |||||||||||||||||| |||| ||||    
T  790 aaaaacgtaaaaattggaaaatctgatgttgtctgtcaggcagatatcggacta 843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 97; Significance: 1e-47; HSPs: 2)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 71 - 328
Target Start/End: Complemental strand, 5610 - 5352
Alignment:
Q  71 gagtcgtttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccattttg--aaaatgagtgtttatgcaaggttctggaaatcgatatttgg 168  Q
    ||||||||||||||||| |  |||||||| |||||| ||| ||| | |||| |||||  ||||||||||||| || |||| | ||||||  ||  || ||    
T  5610 gagtcgtttgggagaaatcaggagtttcgggtgaaaattcaattgttaaccgttttggaaaaatgagtgtttgtgtaaggctttggaaaatgaatttggg 5511  T
Q  169 gtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttt 268  Q
    || |||||| || |||||||||||||  ||  |||||||||||||||||||| | ||||||| |||||  ||| ||||||||||||||||||||| ||||    
T  5510 gttgttgaa-ctggaatttttctgtacttttagatagagctaagtgtcaggaacatgtaggcaaaaacggcattgaaaacgggttaacggtttggttttt 5412  T
Q  269 acgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtcaggcagaaatcgtacta 328  Q
    | |||||||||||||||||||| |||| ||| ||||||||||||||||||||||| ||||    
T  5411 atgcgcgaaaacgtgaaaattgaaaaatctgatgttgtctgtcaggcagaaatcgaacta 5352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 68 - 287
Target Start/End: Original strand, 876 - 1096
Alignment:
Q  68 gttgagtcgtttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccatttt-gaaaatgagtgtttatgcaaggttctggaaatcgatattt 166  Q
    ||||||||||||||||||||||| |  ||||||||||||  |||||  | || |||||| |  ||| |||| |||||  ||||| || |||  ||| |||    
T  876 gttgagtcgtttgggagaaaacgggtttttcgtgtgaaatgtcgatgtttaagcattttcgccaataagtgcttatgtgaggttttgaaaaatgattttt 975  T
Q  167 ggg-tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggat 265  Q
    ||| |||||||| | || | |||| ||||||||||| |||||  |||||||||||| |||| |||||||||  |||| ||| | | ||||||||||| ||    
T  976 gggatggttgaagcatggaatttt-tgtagattatgttagagtcaagtgtcaggagtgtgtgggcgaaaacggcatcaaaatccgattaacggtttgaat 1074  T
Q  266 tttacgcgcgaaaacgtgaaaa 287  Q
    |||||||||||||  |||||||    
T  1075 tttacgcgcgaaatggtgaaaa 1096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0377 (Bit Score: 94; Significance: 8e-46; HSPs: 1)
Name: scaffold0377
Description:

Target: scaffold0377; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 164 - 285
Target Start/End: Original strand, 16405 - 16526
Alignment:
Q  164 tttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttgg 263  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||| ||||||||||||    
T  16405 tttgtgtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacggtatcgaaaacggattaacggtttgg 16504  T
Q  264 attttacgcgcgaaaacgtgaa 285  Q
     ||||| |||||||||||||||    
T  16505 tttttatgcgcgaaaacgtgaa 16526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0962 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: scaffold0962
Description:

Target: scaffold0962; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 153 - 285
Target Start/End: Original strand, 906 - 1038
Alignment:
Q  153 ggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggt 252  Q
    |||||| ||| ||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||    
T  906 ggaaatagatttttagttggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagtgtgtaggcgaaaacggcatcgaaaacgggt 1005  T
Q  253 taacggtttggattttacgcgcgaaaacgtgaa 285  Q
    ||||||||||| |||||  ||||||||||||||    
T  1006 taacggtttggtttttattcgcgaaaacgtgaa 1038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0429 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: scaffold0429
Description:

Target: scaffold0429; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 123 - 311
Target Start/End: Original strand, 2260 - 2447
Alignment:
Q  123 ttttgaaaatgagtgtttatgcaaggttctggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagc 222  Q
    |||||||||| || | |||||  |||||  ||||||| || ||| |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  2260 ttttgaaaataagagattatgtgaggtttgggaaatcaatttttaggtggttgaaacttgaatttttctatagattatgatagagctaagtgtaaggagc 2359  T
Q  223 gtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtc 311  Q
     |||||||||||||  ||||||||||||||||||||||||| ||||| ||| |||||||||||  |||| ||| ||| |||||||||||    
T  2360 atgtaggcgaaaacggcatcgaaaacgggttaacggtttggtttttatgcgagaaaacgtgaaggttgg-aaatctgatgttgtctgtc 2447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 91; Significance: 5e-44; HSPs: 2)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 159 - 285
Target Start/End: Complemental strand, 3645 - 3519
Alignment:
Q  159 cgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacgg 258  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||| ||||||||||    
T  3645 cgatttttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtttaggcgaaaacggcatcgaaaatgggttaacgg 3546  T
Q  259 tttggattttacgcgcgaaaacgtgaa 285  Q
    ||||  ||||| | |||||||||||||    
T  3545 tttgatttttatgtgcgaaaacgtgaa 3519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 68 - 287
Target Start/End: Complemental strand, 31137 - 30917
Alignment:
Q  68 gttgagtcgtttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccatttt-gaaaatgagtgtttatgcaaggttctggaaatcgatattt 166  Q
    ||||||||||||||||||||||| |  ||||||||||||  |||||  | || | |||| |  ||| |||| |||||  ||||| ||||||  ||  |||    
T  31137 gttgagtcgtttgggagaaaacgggtttttcgtgtgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaatgactttt 31038  T
Q  167 ggg-tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggat 265  Q
    ||| |||||||||| |||| |||| | ||||||||| |||||  ||||||||||| |||||||| ||||||  |||| ||| | | ||||||||||| ||    
T  31037 gggatggttgaaacatgaaatttt-tatagattatgttagagtcaagtgtcaggatcgtgtaggtgaaaacggcatcaaaatccgattaacggtttgcat 30939  T
Q  266 tttacgcgcgaaaacgtgaaaa 287  Q
    |||||||||||||  |||||||    
T  30938 tttacgcgcgaaatagtgaaaa 30917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 77 - 328
Target Start/End: Original strand, 23096 - 23348
Alignment:
Q  77 tttgggagaaaa-cgagagtttcgtgtgaaacttcgattatgaaccattttg-aaaatgagtgtttatgcaaggttctggaaatcgatatttgggtggtt 174  Q
    |||||||||||| ||||||||||| |||||| |||  || | |||| ||||| ||||||||||||  || |||| | ||||||  ||  |||||   |||    
T  23096 tttgggagaaaaacgagagtttcgggtgaaaattcatttgttaaccgttttggaaaatgagtgttg-tgtaaggctttggaaaatgaattttggaatgtt 23194  T
Q  175 gaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgc 274  Q
    |||||||||||||||||| | |||| ||||| ||||||||||| || |  ||||| ||||||  |||||||||||| |||||||||||| ||||||||||    
T  23195 gaaacttgaatttttctgcacattaagatagggctaagtgtcatgaacacgtaggtgaaaacggcatcgaaaacggattaacggtttggtttttacgcgc 23294  T
Q  275 gaaaacgtgaaaattggaaaaactgttgttgtctgtcaggcagaaatcgtacta 328  Q
    |||||||||||||||||||||  || ||||||||||||||||||||||| ||||    
T  23295 gaaaacgtgaaaattggaaaatttgatgttgtctgtcaggcagaaatcggacta 23348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 90; Significance: 2e-43; HSPs: 3)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 164 - 285
Target Start/End: Original strand, 817 - 938
Alignment:
Q  164 tttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttgg 263  Q
    ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||    
T  817 tttggatggttgaaactttaatttttctgtagattatgatagagctaagtgtcaggagtgtgtaggcgaaaacggcatcgaaaacgggttaacggtttgg 916  T
Q  264 attttacgcgcgaaaacgtgaa 285  Q
     ||||| || ||||||||||||    
T  917 tttttatgcacgaaaacgtgaa 938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 183 - 285
Target Start/End: Original strand, 7586 - 7688
Alignment:
Q  183 aatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgt 282  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||| ||||| || |||||||||    
T  7586 aatttttctgtagattatgatagagctaagtgtcaggagtgtgtaggcgaaaacggcatcgaaaacgggttaacggtttggtttttatgcacgaaaacgt 7685  T
Q  283 gaa 285  Q
    |||    
T  7686 gaa 7688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 170 - 288
Target Start/End: Complemental strand, 26480 - 26364
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    ||||||| ||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||  |||| |||   | ||||||||||| ||||||    
T  26480 tggttgagacttgaattt--ctgtagattatgatagagttaagtgtcaggagcgtgtaggcgaaaacggcatcaaaattcgattaacggtttgaatttta 26383  T
Q  270 cgcgcgaaaacgtgaaaat 288  Q
    |||||||||  ||||||||    
T  26382 cgcgcgaaatggtgaaaat 26364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 89; Significance: 7e-43; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 129 - 285
Target Start/End: Complemental strand, 72439 - 72283
Alignment:
Q  129 aaatgagtgtttatgcaaggttctggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtag 228  Q
    ||||||||| |||||  || || |||||| |||| ||||||||||||||||  ||||||||||||||||| |||||||||||||||||||||||| ||||    
T  72439 aaatgagtgattatgtgagattttggaaaccgatttttgggtggttgaaacaggaatttttctgtagattgtgatagagctaagtgtcaggagcgcgtag 72340  T
Q  229 gcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 285  Q
    |||||||   ||||||||||||||||||||||||  ||||| |||||||||||||||    
T  72339 gcgaaaatggcatcgaaaacgggttaacggtttgatttttaggcgcgaaaacgtgaa 72283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 88; Significance: 3e-42; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 146 - 285
Target Start/End: Complemental strand, 18613 - 18474
Alignment:
Q  146 aggttctggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaa 245  Q
    ||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || |||||||||||  |||||||    
T  18613 aggttttggagatcgatttttgggtggttgaaacttgaatttttctgtagattatgatagagccaagtgtcaggagtgtttaggcgaaaacggcatcgaa 18514  T
Q  246 aacgggttaacggtttggattttacgcgcgaaaacgtgaa 285  Q
    || ||||||||||||||  ||||| | |||||||||||||    
T  18513 aatgggttaacggtttgatttttatgtgcgaaaacgtgaa 18474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 77 - 282
Target Start/End: Complemental strand, 14610 - 14410
Alignment:
Q  77 tttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccattttg-aaaatgagtgtttatgcaaggttctggaaatcgatatttg-ggtggtt 174  Q
    |||||||||||||| ||||||||| ||||| |||  || | |||| ||||| ||||||||||||| ||| ||||| || |||  || ||||| ||| |||    
T  14610 tttgggagaaaacgggagtttcgtttgaaaattcatttgttaaccgttttggaaaatgagtgtttgtgcgaggtt-tgtaaaatga-atttgaggttgtt 14513  T
Q  175 gaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgc 274  Q
    |||||| | |||||||||   |||||||||| ||||||||     ||| |||||| ||||||  ||| |||||||| |||||||||||  ||||| ||||    
T  14512 gaaactgggatttttctgggcattatgatagtgctaagtg-----agcatgtaggtgaaaacggcatagaaaacggattaacggtttgatttttatgcgc 14418  T
Q  275 gaaaacgt 282  Q
    ||||||||    
T  14417 gaaaacgt 14410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 88; Significance: 3e-42; HSPs: 2)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 153 - 312
Target Start/End: Original strand, 1560 - 1717
Alignment:
Q  153 ggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggt 252  Q
    |||||||||| ||||| |||||||||||||| |||||| |||||||||||||||||||||| |||||||||||||||||||||   ||||||||||||||    
T  1560 ggaaatcgatttttgg-tggttgaaacttgagtttttcggtagattatgatagagctaagtctcaggagcgtgtaggcgaaaatggcatcgaaaacgggt 1658  T
Q  253 taacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtca 312  Q
    ||||||||||| ||||| ||||||||| |||||  || ||||| ||| ||||||||||||    
T  1659 taacggtttgggttttatgcgcgaaaatgtgaaggtt-gaaaatctgatgttgtctgtca 1717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 170 - 288
Target Start/End: Complemental strand, 7015 - 6898
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    ||||||| ||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||| ||||||    
T  7015 tggttgagacttgaaattgt-tgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacggcatcgaaaatgggttaacggtttgaatttta 6917  T
Q  270 cgcgcgaaaacgtgaaaat 288  Q
    |||||||||  ||||||||    
T  6916 cgcgcgaaatggtgaaaat 6898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 174 - 328
Target Start/End: Original strand, 7228 - 7382
Alignment:
Q  174 tgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcg 273  Q
    ||||||| | ||||||||||  |||||||||| ||||||||| |||||| |||||| |||||| |||||||||| || ||||  |||||| |||||||||    
T  7228 tgaaactgggatttttctgtgcattatgatagtgctaagtgttaggagcatgtaggtgaaaacgacatcgaaaatggattaaaagtttggtttttacgcg 7327  T
Q  274 cgaaaacgtgaaaattggaaaaactgttgttgtctgtcaggcagaaatcgtacta 328  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||    
T  7328 cgaaaacgtgaaaattggaaaatctgatgttgtctgtcaggcagaaatcggacta 7382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 85; Significance: 2e-40; HSPs: 4)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 212 - 328
Target Start/End: Complemental strand, 16107 - 15991
Alignment:
Q  212 gtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtc 311  Q
    |||||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||    
T  16107 gtgtcaggagcgtgtaggcgaaaacggcatcgaaaacaggttaacggtttggattttacgcgagaaaacgtgaaaattggaaaatctgatgttgtctgtc 16008  T
Q  312 aggcagaaatcgtacta 328  Q
    | |||||||||| ||||    
T  16007 atgcagaaatcggacta 15991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 123 - 215
Target Start/End: Complemental strand, 19494 - 19402
Alignment:
Q  123 ttttgaaaatgagtgtttatgcaaggttctggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgt 215  Q
    ||||| |||| |||| ||| | |||||| |||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  19494 ttttgcaaataagtgattacgtaaggttatggaaaccgatttttgggtggttgaaacatgaatttttctgtagattatgatagagctaagtgt 19402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 259 - 323
Target Start/End: Complemental strand, 5008 - 4944
Alignment:
Q  259 tttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtcaggcagaaatcg 323  Q
    |||||||||||||| |||||||||||||||||||||| ||| |||||||||| ||||||||||||    
T  5008 tttggattttacgctcgaaaacgtgaaaattggaaaatctgatgttgtctgtaaggcagaaatcg 4944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 259 - 321
Target Start/End: Complemental strand, 11128 - 11066
Alignment:
Q  259 tttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtcaggcagaaat 321  Q
    |||||||||||||||||||||| |||||||||||||| ||| |||||||||| ||||||||||    
T  11128 tttggattttacgcgcgaaaacatgaaaattggaaaatctgatgttgtctgtaaggcagaaat 11066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 123 - 285
Target Start/End: Complemental strand, 117216 - 117054
Alignment:
Q  123 ttttgaaaatgagtgtttatgcaaggttctggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagc 222  Q
    ||||| ||||||||| |||||  ||||| | |||| ||   ||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||    
T  117216 ttttgcaaatgagtgattatgtgaggttttagaaaccgtattttgggtggttgaaactggaatttttctgtagattgtgatagagctatgtgtcaggagc 117117  T
Q  223 gtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 285  Q
    | ||||||||||||| ||||| ||||||||||||||||||  ||||| |||| ||||||||||    
T  117116 gcgtaggcgaaaacagcatcgtaaacgggttaacggtttgatttttaggcgcaaaaacgtgaa 117054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 82; Significance: 1e-38; HSPs: 4)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 123 - 312
Target Start/End: Original strand, 118066 - 118254
Alignment:
Q  123 ttttgaaaatgagtgtttatgcaaggttctggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagc 222  Q
    ||||| |||| |||| |||||  ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |    
T  118066 ttttgcaaataagtgattatgtgaggttttggaaatcgatttttgggtggttgaaacttgaatttttctgtagattatgatagggctaagtgtgaggaac 118165  T
Q  223 gtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtca 312  Q
     |||||| |||||| |||||||||||   |||||||| ||  ||||| ||||||||| |||||  || ||||| ||| ||||||||||||    
T  118166 atgtaggtgaaaacgacatcgaaaacaaattaacggtatgatttttatgcgcgaaaatgtgaaggtt-gaaaatctgatgttgtctgtca 118254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 123 - 282
Target Start/End: Original strand, 113232 - 113391
Alignment:
Q  123 ttttgaaaatgagtgtttatgcaaggttctggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagc 222  Q
    ||||| |||| |||| |||||  | ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |    
T  113232 ttttgcaaataagtgattatgtgatgttctggaaatcgatttttgggtggttgaaacttgaatttttctgtagattatgatagggctaagtgtgaggaac 113331  T
Q  223 gtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgt 282  Q
     |||||| ||||||  ||||||||||   |||| |||||| |||||| ||||||||||||    
T  113332 atgtaggtgaaaacggcatcgaaaacaaattaatggtttgaattttatgcgcgaaaacgt 113391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #3
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 172 - 321
Target Start/End: Complemental strand, 94542 - 94393
Alignment:
Q  172 gttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacg 271  Q
    ||||||||||||||||| ||| | |||| ||||| ||||||||||| || |  ||||| ||||||  |||||||||||| |||| ||||||| ||||| |    
T  94542 gttgaaacttgaattttgctgcacattaagatagggctaagtgtcatgaacacgtaggtgaaaacggcatcgaaaacggattaaaggtttggtttttatg 94443  T
Q  272 cgcgaaaacgtgaaaattggaaaaactgttgttgtctgtcaggcagaaat 321  Q
    |||||||| ||||||||||||||| ||| |||||||||||||||||||||    
T  94442 cgcgaaaatgtgaaaattggaaaatctgatgttgtctgtcaggcagaaat 94393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 25433 - 25491
Alignment:
Q  225 gtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtg 283  Q
    ||||| ||||||  |||||||||||| |||||||||||  ||||| |||||||||||||    
T  25433 gtaggtgaaaacggcatcgaaaacggattaacggtttgatttttatgcgcgaaaacgtg 25491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 81; Significance: 4e-38; HSPs: 2)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 153 - 285
Target Start/End: Complemental strand, 8896 - 8765
Alignment:
Q  153 ggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggt 252  Q
    |||||||||| ||||| | |||||||||||| |||||| ||||||||||||||||||| || |||||||||||||| |||||||  ||||||||||||||    
T  8896 ggaaatcgatttttgg-tagttgaaacttgagtttttcagtagattatgatagagctatgtctcaggagcgtgtagacgaaaacggcatcgaaaacgggt 8798  T
Q  253 taacggtttggattttacgcgcgaaaacgtgaa 285  Q
    ||||||||||| ||||| |||||||||||||||    
T  8797 taacggtttggtttttatgcgcgaaaacgtgaa 8765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 239 - 285
Target Start/End: Complemental strand, 6659 - 6613
Alignment:
Q  239 catcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 285  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||    
T  6659 catcgaaaacgggttaacggtttggtttttatgcgcgaaaacgtgaa 6613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 164 - 285
Target Start/End: Complemental strand, 3624 - 3503
Alignment:
Q  164 tttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttgg 263  Q
    ||||||| |||||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||    
T  3624 tttgggtagttgaaacttgaatatttcttttgattatgatagagctaagtgtcaggagcgtgtaggcgaaaacggcatcgaaaacgggttaacgatttgg 3525  T
Q  264 attttacgcgcgaaaacgtgaa 285  Q
     |||||  ||||||||| ||||    
T  3524 tttttatacgcgaaaacatgaa 3503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 146 - 285
Target Start/End: Complemental strand, 4469 - 4333
Alignment:
Q  146 aggttctggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaa 245  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||| ||||| |||||  ||| |||    
T  4469 aggttttggaaatcgatttttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtc---agcgtttaggcaaaaacggcattgaa 4373  T
Q  246 aacgggttaacggtttggattttacgcgcgaaaacgtgaa 285  Q
    ||||||||||| |||||  ||||| | |||||||||||||    
T  4372 aacgggttaacagtttgatttttatgtgcgaaaacgtgaa 4333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2046 (Bit Score: 74; Significance: 7e-34; HSPs: 1)
Name: scaffold2046
Description:

Target: scaffold2046; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 152 - 285
Target Start/End: Complemental strand, 949 - 817
Alignment:
Q  152 tggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacggg 251  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||| |||||   |||||||||| |     
T  949 tggaaatcgatttttgggtggttgaaacttgaatctttctgtagattatgatagggctaagtgtcaggagcatgtaggtgaaaa-ggcatcgaaaacaga 851  T
Q  252 ttaacggtttggattttacgcgcgaaaacgtgaa 285  Q
    ||||| |||||  ||||| |||||||||||||||    
T  850 ttaacagtttgatttttatgcgcgaaaacgtgaa 817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 153 - 285
Target Start/End: Complemental strand, 5641 - 5510
Alignment:
Q  153 ggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggt 252  Q
    |||||||||| ||||| | |||||||||||| |||||| ||||||||||||||||||| || |||||||| ||||| |||||||  ||||||||||||||    
T  5641 ggaaatcgatttttgg-tagttgaaacttgagtttttcggtagattatgatagagctatgtctcaggagcatgtagacgaaaacggcatcgaaaacgggt 5543  T
Q  253 taacggtttggattttacgcgcgaaaacgtgaa 285  Q
    ||||||||||| ||||| || ||||||||||||    
T  5542 taacggtttggtttttatgctcgaaaacgtgaa 5510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 153 - 285
Target Start/End: Original strand, 17541 - 17672
Alignment:
Q  153 ggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggt 252  Q
    ||||||||||  ||||||||||||||||||||| ||| ||||||||||||||| ||||| ||| ||||||||||||||||||||  ||||||||||||||    
T  17541 ggaaatcgattattgggtggttgaaacttgaatctttttgtagattatgatagggctaa-tgttaggagcgtgtaggcgaaaacggcatcgaaaacgggt 17639  T
Q  253 taacggtttggattttacgcgcgaaaacgtgaa 285  Q
    ||||||||||  ||||| |  ||||||||||||    
T  17640 taacggtttgatttttatgttcgaaaacgtgaa 17672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 224 - 328
Target Start/End: Complemental strand, 147086 - 146982
Alignment:
Q  224 tgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtcaggcagaaatcg 323  Q
    |||||| ||||||  ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  147086 tgtaggtgaaaacggcatcgaaaacgggttaacgatttggattttacgtgcgaaaacgtgaaaattggaaaatctgatgttgtctgtcaggcagaaatcg 146987  T
Q  324 tacta 328  Q
     ||||    
T  146986 gacta 146982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 153 - 312
Target Start/End: Complemental strand, 3874 - 3716
Alignment:
Q  153 ggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggt 252  Q
    |||||||||| || ||||||||||||||||||| ||||||||||||||||||| |||||||||||||| | |||||||||||||  ||||||||||   |    
T  3874 ggaaatcgattttggggtggttgaaacttgaatctttctgtagattatgatagggctaagtgtcaggaccatgtaggcgaaaacggcatcgaaaacacat 3775  T
Q  253 taacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtca 312  Q
    |||||| |||  ||||| |||||||||| ||||  || ||||| ||| ||||||||||||    
T  3774 taacggattgatttttatgcgcgaaaacatgaaggtt-gaaaatctgatgttgtctgtca 3716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 66; Significance: 4e-29; HSPs: 2)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 77 - 312
Target Start/End: Original strand, 13980 - 14214
Alignment:
Q  77 tttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccattttg-aaaatgagtgtttatgcaaggttctggaaatcgatatttg-ggtggtt 174  Q
    |||||||||||||| ||||||||| ||||| |||  || | |||| ||||| ||||||||||||| ||  ||||| || |||  || ||||| ||| |||    
T  13980 tttgggagaaaacgggagtttcgtttgaaaattcatttgttaaccgttttggaaaatgagtgtttgtgtgaggtt-tgtaaaatga-atttgaggttgtt 14077  T
Q  175 gaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgc 274  Q
    |||||| | ||||||||||  |||||||||| ||||||||| |||||| |||||||||||||  |||||||||||| |||||||||||  ||||| ||||    
T  14078 gaaactgggatttttctgtgcattatgatagtgctaagtgttaggagcatgtaggcgaaaacggcatcgaaaacggattaacggtttgatttttatgcgc 14177  T
Q  275 gaaaacgtgaaaattggaaaaactgttgttgtctgtca 312  Q
    |||||||| | || | ||||| ||| ||||||||||||    
T  14178 gaaaacgt-agaagttgaaaatctgatgttgtctgtca 14214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 172 - 236
Target Start/End: Original strand, 22048 - 22112
Alignment:
Q  172 gttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaac 236  Q
    ||||||||| | ||||||||||  |||||||||| || || ||| |||||| |||||||||||||    
T  22048 gttgaaactgggatttttctgtgcattatgatagtgccaaatgttaggagcatgtaggcgaaaac 22112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 66; Significance: 4e-29; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 244 - 321
Target Start/End: Complemental strand, 14818 - 14741
Alignment:
Q  244 aaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtcaggcagaaat 321  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||||    
T  14818 aaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaatatgatgttgtctgtcaggcagaaat 14741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 236
Target Start/End: Original strand, 16048 - 16217
Alignment:
Q  68 gttgagtcgtttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccattttgaa-aatgagtgtttatgcaaggttctggaaatcgatattt 166  Q
    ||||||||||||||||||||||| |  ||||||||||||  |||||  | || | |||| |  ||| ||||||||||  ||||| ||||||  ||  |||    
T  16048 gttgagtcgtttgggagaaaacgggtttttcgtgtgaaatgtcgatgtttaagcgttttcaccaataagtgtttatgtgaggttttggaaaatgactttt 16147  T
Q  167 ggg-tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaac 236  Q
    ||| |||||||||  || | ||| |||||||||||| |||||  |||||||| ||||||||||||||||||    
T  16148 gggatggttgaaatgtggaattt-ctgtagattatgttagagtcaagtgtcacgagcgtgtaggcgaaaac 16217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 167 - 312
Target Start/End: Complemental strand, 76932 - 76788
Alignment:
Q  167 gggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatt 266  Q
    |||| ||||||||||||||||||||||| |||||||||| ||||||||||| || | |||||| ||||||  |||||||||| | |||||||||||  ||    
T  76932 gggttgttgaaacttgaatttttctgtacattatgatagggctaagtgtcaagaacatgtaggtgaaaacggcatcgaaaacagattaacggtttgattt 76833  T
Q  267 ttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtca 312  Q
    ||| |||||||||||||||  || ||||| ||| ||||||||||||    
T  76832 ttatgcgcgaaaacgtgaaggtt-gaaaatctgatgttgtctgtca 76788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0521 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0521
Description:

Target: scaffold0521; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 123 - 287
Target Start/End: Complemental strand, 8543 - 8379
Alignment:
Q  123 ttttgaaaatgagtgtttatgcaaggttctggaaatcgatatttggg-tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggag 221  Q
    ||||| |||| |||| |||||  ||||| ||||||  ||| |||||| |||||||||| |||| ||| ||||||| |||||||||| |||||||||||||    
T  8543 ttttgcaaataagtgattatgtgaggttttggaaaatgatttttgggatggttgaaacatgaaattt-ctgtagactatgatagagttaagtgtcaggag 8445  T
Q  222 cgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 287  Q
    || ||||||||||||  |||  ||||| ||||||||||||| |||||||||||||||  |||||||    
T  8444 cgcgtaggcgaaaacggcatttaaaacaggttaacggtttgaattttacgcgcgaaatggtgaaaa 8379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 68 - 287
Target Start/End: Complemental strand, 16288 - 16068
Alignment:
Q  68 gttgagtcgtttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccatttt-gaaaatgagtgtttatgcaaggttctggaaatcgatattt 166  Q
    ||||||||||||||||||||||| |  ||||||||||||  |||||  | ||   |||| |  ||| ||||||||||  ||||| ||||||  ||  |||    
T  16288 gttgagtcgtttgggagaaaacgggtttttcgtgtgaaatgtcgatgtttaagtgttttcgccaataagtgtttatgtgaggttttggaaaatgactttt 16189  T
Q  167 ggg-tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggat 265  Q
    ||| |||||||||| || | |||| ||||||||||| |||||  ||||||||||||||||||||||||||| ||||| ||| | | ||||||||||| ||    
T  16188 gggatggttgaaacatggaatttt-tgtagattatgttagagtcaagtgtcaggagcgtgtaggcgaaaacgacatcaaaatccgattaacggtttgaat 16090  T
Q  266 tttacgcgcgaaaacgtgaaaa 287  Q
    |||||||||||||  |||||||    
T  16089 tttacgcgcgaaatggtgaaaa 16068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 184 - 312
Target Start/End: Original strand, 10207 - 10334
Alignment:
Q  184 atttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtg 283  Q
    ||||||||||  |||||||||| ||||||||| |||||| |||||| ||||||  |||||||||||| |||||||||||  ||||| ||  |||||||||    
T  10207 atttttctgtgcattatgatagtgctaagtgttaggagcatgtaggtgaaaacggcatcgaaaacggattaacggtttgatttttatgcaggaaaacgtg 10306  T
Q  284 aaaattggaaaaactgttgttgtctgtca 312  Q
     ||||||||||| ||| ||||||||||||    
T  10307 -aaattggaaaatctggtgttgtctgtca 10334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 57; Significance: 9e-24; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 68 - 278
Target Start/End: Complemental strand, 79532 - 79321
Alignment:
Q  68 gttgagtcgtttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccatttt-gaaaatgagtgtttatgcaaggttctggaaatcgatattt 166  Q
    ||||||||||||||||||||||| |  ||||||||||||  |||||  | || | |||| |  ||| ||||||||||  ||||| ||||||  ||  |||    
T  79532 gttgagtcgtttgggagaaaacgggtttttcgtgtgaaatgtcgatgtttaagcgttttcgccaataagtgtttatgtgaggttttggaaaatgactttt 79433  T
Q  167 gggt-ggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggat 265  Q
    |||| ||||||||| |||| |||| ||||||||||| |||||  |||||| ||||||||||||||||||||  |||| ||| ||| ||||| ||||| ||    
T  79432 gggttggttgaaacatgaaatttt-tgtagattatgttagagtcaagtgttaggagcgtgtaggcgaaaacggcatcaaaatcggattaacagtttgaat 79334  T
Q  266 tttacgcgcgaaa 278  Q
    |||||||||||||    
T  79333 tttacgcgcgaaa 79321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 170 - 287
Target Start/End: Complemental strand, 40250 - 40134
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    |||||||||| |||| |||| ||||||||||| |||||  ||||||||||||||||||||||||||| ||||| ||| | | |||||| |||| ||||||    
T  40250 tggttgaaacatgaaatttt-tgtagattatgttagagtcaagtgtcaggagcgtgtaggcgaaaacgacatcaaaatccgattaacgttttgaatttta 40152  T
Q  270 cgcgcgaaaacgtgaaaa 287  Q
    |||||||||  |||||||    
T  40151 cgcgcgaaatggtgaaaa 40134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 170 - 287
Target Start/End: Complemental strand, 45733 - 45617
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    |||||||||| |||| |||| ||||||||||| |||||  ||||||||||||||||||||||||||| ||||| ||| | | |||||| |||| ||||||    
T  45733 tggttgaaacatgaaatttt-tgtagattatgttagagtcaagtgtcaggagcgtgtaggcgaaaacgacatcaaaatccgattaacgatttgaatttta 45635  T
Q  270 cgcgcgaaaacgtgaaaa 287  Q
    |||||||||  |||||||    
T  45634 cgcgcgaaatggtgaaaa 45617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 172 - 285
Target Start/End: Original strand, 6690 - 6803
Alignment:
Q  172 gttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacg 271  Q
    ||||||||||||||||||||||||| ||||||   |||||||||||||| | |||||  |||||| ||||||||||| | |||||||||||  ||||| |    
T  6690 gttgaaacttgaatttttctgtagaatatgatgatgctaagtgtcaggaacatgtagttgaaaacgacatcgaaaacagattaacggtttgatttttatg 6789  T
Q  272 cgcgaaaacgtgaa 285  Q
    ||||||||| ||||    
T  6790 cgcgaaaacatgaa 6803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 170 - 287
Target Start/End: Original strand, 166773 - 166890
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    |||||||||| |||| |||| ||||||||||| |||||  |||||||||||||||||||||||||||  |||| ||| | | ||||||| ||| ||||||    
T  166773 tggttgaaacatgaaattttttgtagattatgttagagtcaagtgtcaggagcgtgtaggcgaaaacggcatcaaaatctgattaacggcttgaatttta 166872  T
Q  270 cgcgcgaaaacgtgaaaa 287  Q
    |||||||||  |||||||    
T  166873 cgcgcgaaatggtgaaaa 166890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 152 - 288
Target Start/End: Complemental strand, 6807 - 6672
Alignment:
Q  152 tggaaatcgatatttgggtggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacggg 251  Q
    ||||||||||| || |||||| ||| ||||||| |   ||||||||||||||||||| |||||||||||| |||||||||||||   |||| ||| | |     
T  6807 tggaaatcgattttggggtggatgagacttgaaatag-ctgtagattatgatagagccaagtgtcaggagagtgtaggcgaaaatggcatcaaaatccga 6709  T
Q  252 ttaacggtttggattttacgcgcgaaaacgtgaaaat 288  Q
    ||||||||||| |||||||||||||||  ||||||||    
T  6708 ttaacggtttgaattttacgcgcgaaatggtgaaaat 6672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 193 - 288
Target Start/End: Complemental strand, 51926 - 51831
Alignment:
Q  193 tagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 288  Q
    |||||||||||||||| |||||||||||| ||||||||||||||  |||||||| | | ||||||||| | |||||||||||||||  ||||||||    
T  51926 tagattatgatagagccaagtgtcaggagagtgtaggcgaaaacggcatcgaaatccgattaacggttggaattttacgcgcgaaatggtgaaaat 51831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 51; Significance: 4e-20; HSPs: 3)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 187 - 288
Target Start/End: Original strand, 11082 - 11184
Alignment:
Q  187 tttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaa-acgggttaacggtttggattttacgcgcgaaaacgtgaa 285  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||||  |||| |||  | | ||||||||||| |||||||||||||||  |||||    
T  11082 tttctgtagattatgatagagccaagtgtcaggagagtgtaggcgaaaacggcatcaaaattccgattaacggtttgaattttacgcgcgaaatggtgaa 11181  T
Q  286 aat 288  Q
    |||    
T  11182 aat 11184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 187 - 287
Target Start/End: Original strand, 60 - 160
Alignment:
Q  187 tttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaa 286  Q
    |||||||||||||||||||||| | |||||||||| ||||||||||||||  |||| ||| | | ||||| ||||| |||||||||||||||  ||||||    
T  60 tttctgtagattatgatagagccatgtgtcaggagagtgtaggcgaaaacggcatcaaaatctgattaacagtttgaattttacgcgcgaaatggtgaaa 159  T
Q  287 a 287  Q
    |    
T  160 a 160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 187 - 287
Target Start/End: Original strand, 5364 - 5464
Alignment:
Q  187 tttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaa 286  Q
    |||||||||||||||||||||| | |||||||||| ||||||||||||||  |||| ||| | | ||||| ||||| |||||||||||||||  ||||||    
T  5364 tttctgtagattatgatagagccatgtgtcaggagagtgtaggcgaaaacggcatcaaaatctgattaacagtttgaattttacgcgcgaaatggtgaaa 5463  T
Q  287 a 287  Q
    |    
T  5464 a 5464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 187 - 288
Target Start/End: Complemental strand, 29706 - 29605
Alignment:
Q  187 tttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaa 286  Q
    ||||||||||||| ||||||||  |||||||||||||||||||||||||| ||| | ||| | | ||||||||| | |||||||||||||||  ||||||    
T  29706 tttctgtagattaagatagagcctagtgtcaggagcgtgtaggcgaaaacgacaccaaaatccgattaacggttggaattttacgcgcgaaatggtgaaa 29607  T
Q  287 at 288  Q
    ||    
T  29606 at 29605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 187 - 288
Target Start/End: Complemental strand, 35171 - 35070
Alignment:
Q  187 tttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaa 286  Q
    ||||||||||||| ||||||||  |||||||||||||||||||||||||| ||| | ||| | | ||||||||| | |||||||||||||||  ||||||    
T  35171 tttctgtagattaagatagagcctagtgtcaggagcgtgtaggcgaaaacgacaccaaaatccgattaacggttggaattttacgcgcgaaatggtgaaa 35072  T
Q  287 at 288  Q
    ||    
T  35071 at 35070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0825 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0825
Description:

Target: scaffold0825; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 190 - 288
Target Start/End: Original strand, 716 - 814
Alignment:
Q  190 ctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 288  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||  |||| ||| | | |||||  |||| |||||||||||||||  ||||||||    
T  716 ctgtagattatgatagagccaagtgtcaggagagtgtaggcgaaaacggcatcaaaatccgattaacaatttgaattttacgcgcgaaatggtgaaaat 814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 172 - 286
Target Start/End: Original strand, 1666 - 1780
Alignment:
Q  172 gttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacg 271  Q
    ||||||||||||||||||||||| | |   |||| ||||||||||| || |  ||||| ||||||  |||||||||||| |||||||||||  ||||| |    
T  1666 gttgaaacttgaatttttctgtacactgatatagggctaagtgtcatgaacaagtaggtgaaaacggcatcgaaaacggattaacggtttgatttttatg 1765  T
Q  272 cgcgaaaacgtgaaa 286  Q
    |||||||||||||||    
T  1766 cgcgaaaacgtgaaa 1780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 189 - 287
Target Start/End: Complemental strand, 28271 - 28173
Alignment:
Q  189 tctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 287  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||  |||  ||| | | ||||||||||| |||||| ||||||||  |||||||    
T  28271 tctgtagattatgatagagttaagtgtcaggagcatgtaggcgaaaacggcattaaaatccgattaacggtttgaattttatgcgcgaaatggtgaaaa 28173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 170 - 288
Target Start/End: Complemental strand, 35230 - 35113
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    ||||||| ||||||| ||| || |||||||||||||||| |||||||||| ||||||||||||||||  |||| |||   | ||||||||||| ||||||    
T  35230 tggttgagacttgaaattt-ctatagattatgatagagccaagtgtcaggggcgtgtaggcgaaaacggcatcaaaattcgattaacggtttgaatttta 35132  T
Q  270 cgcgcgaaaacgtgaaaat 288  Q
    ||| |||||  ||||||||    
T  35131 cgcacgaaatggtgaaaat 35113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 170 - 287
Target Start/End: Original strand, 31810 - 31926
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    |||||||||| ||||  ||| ||||||||||| |||||  ||||| |||||| |||||||||||||| ||||| ||| | | ||||||||||| ||||||    
T  31810 tggttgaaacatgaaaattt-tgtagattatgttagagtcaagtgacaggagtgtgtaggcgaaaacgacatcaaaatctgattaacggtttgaatttta 31908  T
Q  270 cgcgcgaaaacgtgaaaa 287  Q
    |||||||||  |||||||    
T  31909 cgcgcgaaatggtgaaaa 31926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 170 - 287
Target Start/End: Complemental strand, 41034 - 40918
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    |||||||||| ||||  ||| ||||||||||| |||||  ||||| |||||| |||||||||||||| ||||| ||| | | ||||||||||| ||||||    
T  41034 tggttgaaacatgaaaattt-tgtagattatgttagagtcaagtgacaggagtgtgtaggcgaaaacgacatcaaaatctgattaacggtttgaatttta 40936  T
Q  270 cgcgcgaaaacgtgaaaa 287  Q
    |||||||||  |||||||    
T  40935 cgcgcgaaatggtgaaaa 40918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 170 - 287
Target Start/End: Original strand, 19589 - 19705
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    |||||||||| || | |||| ||||||||||| |||||  |||||||||||||||||||||||||||  |||| ||| | | ||||||||||| ||||||    
T  19589 tggttgaaacgtggaatttt-tgtagattatgttagagtcaagtgtcaggagcgtgtaggcgaaaacggcatcaaaatccgattaacggtttgaatttta 19687  T
Q  270 cgcgcgaaaacgtgaaaa 287  Q
    | |||||||  |||||||    
T  19688 cacgcgaaatggtgaaaa 19705  T

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Target: scaffold0452 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 134 - 287
Target Start/End: Original strand, 3248 - 3401
Alignment:
Q  134 agtgtttatgcaaggttctggaaatcgatatttggg-tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcga 232  Q
    ||||||||||  ||||| ||||||  |||  ||||| ||||||||||||||| ||| ||| ||||||||||| | | ||||||||||||| |||||||||    
T  3248 agtgtttatgtgaggttttggaaaatgattattgggatggttgaaacttgaaattt-ctgaagattatgataaatccaagtgtcaggagcatgtaggcga 3346  T
Q  233 aaacaacatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 287  Q
    |||   |||| ||| | | ||||||||||  |||||||||||||||  |||||||    
T  3347 aaatggcatcaaaatccgattaacggtttaaattttacgcgcgaaatggtgaaaa 3401  T

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Target: scaffold0106 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 170 - 288
Target Start/End: Complemental strand, 21723 - 21606
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    ||||||| ||||||| || | ||||||||| |||||||| |||||||||||||||| |||||||||| | | | ||| | | ||||||||||| ||||||    
T  21723 tggttgatacttgaaattgt-tgtagattaagatagagccaagtgtcaggagcgtggaggcgaaaacgagaccaaaatccgattaacggtttgaatttta 21625  T
Q  270 cgcgcgaaaacgtgaaaat 288  Q
    |||| ||||  ||||||||    
T  21624 cgcgtgaaatggtgaaaat 21606  T

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Target: scaffold0686 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 170 - 287
Target Start/End: Original strand, 6613 - 6730
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    |||||||||| ||||  |||  |||||||| | |||||  ||||||||||| |||||||||||||||  |||| ||| | | ||||||||||| ||||||    
T  6613 tggttgaaacatgaaaattttggtagattaagttagagtcaagtgtcaggaacgtgtaggcgaaaacggcatcaaaatccgattaacggtttgaatttta 6712  T
Q  270 cgcgcgaaaacgtgaaaa 287  Q
    |||||||||  |||||||    
T  6713 cgcgcgaaatggtgaaaa 6730  T

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Target: scaffold0256 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 190 - 271
Target Start/End: Original strand, 2175 - 2256
Alignment:
Q  190 ctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacg 271  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||  |||| |||   | ||||||||||| ||||||||    
T  2175 ctgtagattatgatagagccaagtgtcaggagcgtgtaggcgaagacggcatcaaaattcgattaacggtttgaattttacg 2256  T

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Target: scaffold0076 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 68 - 287
Target Start/End: Complemental strand, 38931 - 38711
Alignment:
Q  68 gttgagtcgtttgggagaaaacgagagtttcgtgtgaaacttcgattatgaaccatttt-gaaaatgagtgtttatgcaaggttctggaaatcgatattt 166  Q
    ||||||||||||||||||||||| |  ||||||||||||  |||||  | || | |||| |  ||| |||| |||||  ||||| ||||||  ||  |||    
T  38931 gttgagtcgtttgggagaaaacgggtttttcgtgtgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaatgactttt 38832  T
Q  167 ggg-tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggat 265  Q
    ||| |||||||||| |||| |||| | ||||||||| |||||  ||||||||||| | |||||| ||||||  |||| ||| | | ||||||||||| ||    
T  38831 gggatggttgaaacatgaaatttt-tatagattatgttagagtcaagtgtcaggatcatgtaggtgaaaacggcatcaaaatccgattaacggtttgcat 38733  T
Q  266 tttacgcgcgaaaacgtgaaaa 287  Q
    |||||||||||||  |||||||    
T  38732 tttacgcgcgaaatggtgaaaa 38711  T

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Target: scaffold0103 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 170 - 278
Target Start/End: Complemental strand, 33232 - 33125
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    |||||||||| || | |||| ||||||||||| |||||  ||||||||||||||||||||||||||  ||||| ||| | | |||||||||   ||||||    
T  33232 tggttgaaacatgtaatttt-tgtagattatgttagagtcaagtgtcaggagcgtgtaggcgaaaatgacatcaaaatccgattaacggttccaatttta 33134  T
Q  270 cgcgcgaaa 278  Q
    |||||||||    
T  33133 cgcgcgaaa 33125  T

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Target: scaffold0465 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 283
Target Start/End: Original strand, 10652 - 10763
Alignment:
Q  172 gttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacg 271  Q
    |||||||||||| |||||||| | |||| ||||| ||||||||||| || |  ||||| ||||||  |||| ||||||| |||||||||||  ||||| |    
T  10652 gttgaaacttgactttttctgcacattaagatagggctaagtgtcatgaacaagtaggtgaaaacggcatcaaaaacggattaacggtttgatttttatg 10751  T
Q  272 cgcgaaaacgtg 283  Q
    ||| ||||||||    
T  10752 cgcaaaaacgtg 10763  T

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Target: scaffold0456 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 170 - 236
Target Start/End: Original strand, 2060 - 2125
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaac 236  Q
    |||||||||| |||| ||| |||||||||||| |||||  |||||||||||||||||||||||||||    
T  2060 tggttgaaacatgaaattt-ctgtagattatgttagagtcaagtgtcaggagcgtgtaggcgaaaac 2125  T

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Target: scaffold0456; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 170 - 236
Target Start/End: Original strand, 9205 - 9270
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaac 236  Q
    |||||||||| |||| ||| |||||||||||| |||||  |||||||||||||||||||||||||||    
T  9205 tggttgaaacatgaaattt-ctgtagattatgttagagtcaagtgtcaggagcgtgtaggcgaaaac 9270  T

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Target: scaffold0409 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0409
Description:

Target: scaffold0409; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 170 - 287
Target Start/End: Original strand, 1839 - 1954
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    |||||||||| |||| ||| || ||||||||| | |||   ||||||||||||||||||||| ||||  |||| ||| | | ||||||||||| ||||||    
T  1839 tggttgaaacatgaaattt-ctctagattatgttggagtctagtgtcaggagcgtgtaggcg-aaacggcatcaaaatccgattaacggtttgaatttta 1936  T
Q  270 cgcgcgaaaacgtgaaaa 287  Q
    |||||||||  |||||||    
T  1937 cgcgcgaaatggtgaaaa 1954  T

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Target: scaffold0409; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 170 - 287
Target Start/End: Original strand, 10094 - 10209
Alignment:
Q  170 tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggatttta 269  Q
    |||||||||| |||| ||| || ||||||||| | |||   ||||||||||||||||||||| ||||  |||| ||| | | ||||||||||| ||||||    
T  10094 tggttgaaacatgaaattt-ctctagattatgttggagtctagtgtcaggagcgtgtaggcg-aaacggcatcaaaatccgattaacggtttgaatttta 10191  T
Q  270 cgcgcgaaaacgtgaaaa 287  Q
    |||||||||  |||||||    
T  10192 cgcgcgaaatggtgaaaa 10209  T

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Target: scaffold0205 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 271
Target Start/End: Original strand, 1543 - 1639
Alignment:
Q  175 gaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacg 271  Q
    |||||||| |||||||| |||| | | ||||||||||||||||||| || ||| | |||||||  ||| ||||||| ||||| ||| | ||||||||    
T  1543 gaaacttggatttttctttagaatgttatagagctaagtgtcaggaacgcgtaagagaaaacagaatcaaaaacggattaacagttagaattttacg 1639  T

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Target: scaffold0032 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 286
Target Start/End: Complemental strand, 55148 - 55034
Alignment:
Q  172 gttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttggattttacg 271  Q
    |||||||||||||||||||| || | |  ||||| || |||||||| ||    ||||| ||||||  ||||| |||| | |||||||||||  ||||| |    
T  55148 gttgaaacttgaatttttctttacactgagatagggccaagtgtcatgaaaacgtaggtgaaaacggcatcggaaacagattaacggtttgatttttatg 55049  T
Q  272 cgcgaaaacgtgaaa 286  Q
    |||||||||||||||    
T  55048 cgcgaaaacgtgaaa 55034  T

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